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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061297 ID=TCONS_00061297|Name=TCONS_00061297|organism=Clytia hemisphaerica|type=transcript|length=1877bp
AAAGGATTTCCAGTAAAGATAGCGAGAAATTTCTGCTCGAGAAATTTATT
TCCATATTTTCTAATATGTGGTTTGTtttctctttgatttttcttcctCT
ATTATTCGTCAAATCAAAGTGTAATGAGATTTTGGGCATTCCAGAAAACA
ATCATGGACAGGAAGCAGTTACTTTTGTTGGTGAACAAGAAATAGCCTTA
CCAAAGCACTTCCGACTCGGAGTTATTCCAGTTTTATCTCCAGAATGGAT
TTTCAAATTCTCAATCCGTTTTCACTCGTTGGATTATGTCGGGGATGGAA
CATTCTCTTATTGCACACTTCTTCACCTCACTCAAGGGGGAAACAATGAT
GTGTACGGGGATAGAACCCCAAATATTGCGATCGCAGgaaacccAACATT
GAACGAGATGAGAATTAATGCACCCGTCAACGGAGATAAATCATATCGAC
AGAACATACCTTTCACCCTAGCAGTCAACGAAACTATGGATGTTGAAGTT
CATCAACGATACATAAGCAACGGTGAATATCGATATTTCATTCGCATCAA
TAAAGAAGAAATTCATTCTGTCGTCAATAcccaagcaaaacaattttata
atgtTAAAGTGATTGCTGGTCAAAAATTCACTCGTGCTGAGGTTTGCCCT
GCATCaattaaaaatgtcaaacaCACGAACTTTCTGTAAAATAAAAACGT
GGATATTACAAAGTGCACgaattttttactattttattcAGGATGAATCT
CTCAGGGTTAGCTTTTTAAGATGGTTTATATGCAGTAAAGATAATAAAAT
ATGAGGATATAGGGGTACCAATGATCTTCAAGTCTCATGAGAAAGTTTTG
TTGGAGCTAAACCTTAGCTCAGGTTAATTCCAAGTCGAATGAAGTACATC
CCGCCACCACATCGAGGTGGCTATGAAATAGTATATTTCGGCTGCCGGTT
ATTCTTTCCTTCGTCTATATATATTCTACCGTCAAGCCCCTTTTCAGCGC
AGTTTATCTCAGTCTCAAATTGATCACAACTTCAATCTTTCATAACACGA
ACAACGACGAACAACGACCACCATTTTGCCGTTATACGCGTCAACAACAC
CAGCGTTGAATCCAACGGCTCGCCCAAACTCCATCAACAGCACCACTTTC
TTCAGTAGGCGATGGAACCAATATCCTGGTAACATTAATCTCCTTAATCA
ACAGCTGGCTTCGTCCATTcaaataacgaacgaacgacaaCCTCTTCACC
CACTACCGCCTCAAACGCCCTCACATGAGCGATCAACAACAATAATGGTA
GCCTCGCTACGAGTGAAAACGTCCATCAACTCTCATTGCCACGGTTAACC
CATTCTGATTGCCACCCCTCCTTTAATTTTCGGTATGAATCTTTGTATTG
TTTTCTTAAAGTCTTTAACGCTGGTAAAGTTATTGAGGCAATCTTATCAG
TATTTGTTCCTTTTTTCTCGAATCAGGATAAATTCTGGAATTTTGTTCAA
GGCGCATAAAGATTTTCTGCATTCTGAGTGATTTGTGGCTGGAGTGACAC
TTGTCATCGTTTCTGTAGTTGGGATTGTCGTCGTGCTGCTTCATTAGTCT
TTTAAAAGAGATGGGGATAAAGGGCTTCGATAAAAAGGATCCTAgctctt
attttttttattaccttTGTATCTCTGTCTTATTATGGTTAGGTCAAGTT
AAATTTAGTTTGTGGTTAAGCACTCTGGTTAGAGATCGATGcgttttgtt
tctttttgtttcgaagaGTTCTAAATGTAGGAATAGATTAAATTTGCCCA
TTTGAAATTCGTTGAATATTTTGCATCTGCTTTCTTTTTGAAATGGCAAG
TTGTTGTTGTTACTTGAAGAAAAAGTG Run BLAST on NCBI protein sequence of TCONS_00061297-protein >TCONS_00061297-protein ID=TCONS_00061297-protein|Name=TCONS_00061297-protein|organism=Clytia hemisphaerica|type=polypeptide|length=228bp
RISSKDSEKFLLEKFISIFSNMWFVFSLIFLPLLFVKSKCNEILGIPENN
HGQEAVTFVGEQEIALPKHFRLGVIPVLSPEWIFKFSIRFHSLDYVGDGT
FSYCTLLHLTQGGNNDVYGDRTPNIAIAGNPTLNEMRINAPVNGDKSYRQ
NIPFTLAVNETMDVEVHQRYISNGEYRYFIRINKEEIHSVVNTQAKQFYN
VKVIAGQKFTRAEVCPASIKNVKHTNFL Run BLAST on NCBI transcript from alignment at scaffold_355:211443..215531- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061297 ID=TCONS_00061297|Name=TCONS_00061297|organism=Clytia hemisphaerica|type=transcript|length=4089bp|location=Sequence derived from alignment at scaffold_355:211443..215531- (Clytia hemisphaerica)
AAAGGATTTCCAGTAAAGATAGCGAGAAATTTCTGCTCGAGAAATTTATT
TCCATATTTTCTAATATGTGGTTTGTTTTCTCTTTGATTTTTCTTCCTCT
ATTATTCGTCAAATCAAAGTGTAATGAGGTGGGTAGATTTATGGGTACTA
AAGATTTCTTTTTAAAACTCTGCATCGAAAAGTTCAGACGTGGAGTTTAT
CTACTTCTTTTTTTGGGTCGTTTCGTACGGTGAAGGCATCTTCATAAAGA
CGAAAGACATGTATCTATTTTTCGGATCCGGTATGCGGGAATAGTGTCAG
GATCTGCAGGCGACCTGGTAGGGTTGGGTATGGGTGTGGTTTGGGTGTGG
TTACGTATCAGATTGGCTAGGAATTGGGTTATTATCAGTTAGGGTTAGGG
TTGGAGCTCGAAACAAGCACTCATTACTGACACTCAAACAAGTCATTCAG
TAAGTTAGAAAACATAGAAAATAACTCACAAAAAACCAGAAAGTCAGAAA
AACTACAAACAAGAGACTGGAAAGTACGAAATAAGTCCAGATCTGTCTTT
CGTCTTTGTGAAGAAGCCACGACCGTTTCGTACCACTTTTTGGAAAAGCT
CCTGAATAAAATTACTAATCTGAAGAGCATTTGGATTCCCTTGTCTCCCC
TTTAAAAAATTGAGACATGCACGATAAAATTCTTACAGTCCATCTCCACA
GTTTAAATTTCGGAGAATGCTGAGCTGTGGGCCTCACGGTACCCAATAGG
AGATCAAGTCAAAGTAAACAGTGTCTGAAAAAAGGCTTGACAAACAAACC
CATAGCCTTTGCTAATGGATGTACATTTCATGTTTTAGATTTTGGGCATT
CCAGAAAACAATCATGGACAGGAAGCAGTTACTTTTGTTGGTGAACAAGG
TAAGAAATATTCTCTTATTTGAAGAATGATATTTCAGTCTATATTGAATT
ATGCATTTGGACTTTTGAGGACGGCCGAGTGTCTTAAGTGATTTGCAAAA
ACCCTCAGTTTTGACCCGCAAAATCAAGAACAGTAAAAGTAGCAGAACAC
ACACACCACAAAAACTCCTGACTGATACTACTGACGGAGGAGGATATCTT
TTTTTTTTATTCTCAAATGCCCCAGTATTTTTTTTTCTCCAAAAAAGTCA
AAAGAGTATTTGCGCTGTTACAATTAATAAACCGTAAAATTATTCTCCAA
ACAAATCTGTTGTAACAAAAATAATTGACATAATTCAGAGCTATTTAGAG
CTAAAAACTCTTATAAACTGGGTTCTATTAAAAAAACAACCAAGTTAAGC
TTTGACATATACACTTTTATTGGTAGTCTTTTTATGTATGCATTTTGTTT
TAGAAATAGCCTTACCAAAGCACTTCCGACTCGGAGTTATTCCAGTTTTA
TCTCCAGAATGGATTTTCAAATTCTCAATCCGTTTTCACTCGTTGGATTA
TGTCGGGGATGGAACATTCTCTTATTGCACACTTCTTCACCTCACTCAAG
GGGGAAACAATGATGTGTACGGGGATAGAACCCCAAATATTGCGATCGCA
GGTACTATATTTTTTATCAAGAAATCTTCTCTCAAAATTCGGAAGTTTTG
CGGAATTTAATTTCGCAGTTGAGAAAATTTTTTTGTTTAAGATGTCCTAT
TTTGCCCTGGAAAGACGAATTTTATAGGTGATTTTTTTAATCATGAGAAT
TCGTATTTCGCGGAATTTAATTTCGCAGATTTGTTGAGAAAGCACGAAAT
TAAATTCCGCGAAAATTTGTTCCGCAAAAATTTCCTCCCTTAAGGTACCT
TGAGTGTATAATTTTTTTCCGACACCCGGACCGGGGAGGTGCCAAAAGTT
CAATCACAATCTGCACCTGATTTTGGTCTGAGACGAGGGTAGACTGGAGA
TCCATGCTGTGATTTCTTATTCTATATACTGATGGCGAAATATATAGCAT
GGTATGGGCTGAGAGTTTGAATTTCCCAGAACGTATATAGTAATAACGGT
TGAAAACTTAGCCAATCAAATTTTGTTATTCTTTTACTGGTCACACTCCG
CCCTTAGAGAAAGCGCAATTTCCGAAATTTTGTTTTTATTTTAGTAAGTG
AGGACAGCACTAAATTCGAATTTGCCACTGTAAACATTTTGAGGCAGAAA
TCTGCCTCACAGGTCATACCCGTCATGTATATACATCAGATTATAAAAAT
ACAGGACAGTTCTCCTGTCTATTACGAGGGTGGCATTTTGATGTAGAGGG
TAAACAATTTTTTATATCTCGAGGGTTTAAATTTCTATTAAAGGTATAGA
GTAGTTTTTTAAGCATTTGAGGCTGTGAAAAGTAAAAGTTTTCCATAAAA
TCTTGCCACTGTAAATAACATCTCCATTTTTTCATTATCAATAAATATAA
ACAAGTATATAGAATTCTTAAGAATTGAGCTGTCCAGCAAAGTCCGTTTC
CGCCATTATGGATGCAAACTTTTGAATTTGTAGATGCAACACCTCGCAGA
TCAAACATTTGCTTTCTTAGTGGCAGAAGTTAAACGTAACTTGAGAAAAG
ATGAAAAACCTCTCTATCTATATTATAGTTAATTTTTTTTTTTTTTAAGG
AAACCCAACATTGAACGAGATGAGAATTAATGCACCCGTCAACGGAGATA
AATCATATCGACAGAACATACCTTTCACCCTAGCAGTCAACGAAACTATG
GATGTTGAAGTTCATCAACGATACATAAGCAACGGTGAATATCGATATTT
CATTCGCATCAATAAAGAAGAAATTCATTCTGTCGTCAATACCCAAGCAA
AACAATTTTATAATGTTAAAGTGATTGCTGGTCAAAAATTCACTCGTGCT
GAGGTTTGCCCTGCATCAATTAAAAATGTCAAACACACGAACTTTCTGTA
AAATAAAAACGTGGATATTACAAAGTGCACGAATTTTTTACTATTTTATT
CAGGATGAATCTCTCAGGGTTAGCTTTTTAAGATGGTTTATATGCAGTAA
AGATAATAAAATATGAGGATATAGGGGTACCAATGATCTTCAAGTCTCAT
GAGAAAGTTTTGTTGGAGCTAAACCTTAGCTCAGGTTAATTCCAAGTCGA
ATGAAGTACATCCCGCCACCACATCGAGGTGGCTATGAAATAGTATATTT
CGGCTGCCGGTTATTCTTTCCTTCGTCTATATATATTCTACCGTCAAGCC
CCTTTTCAGCGCAGTTTATCTCAGTCTCAAATTGATCACAACTTCAATCT
TTCATAACACGAACAACGACGAACAACGACCACCATTTTGCCGTTATACG
CGTCAACAACACCAGCGTTGAATCCAACGGCTCGCCCAAACTCCATCAAC
AGCACCACTTTCTTCAGTAGGCGATGGAACCAATATCCTGGTAACATTAA
TCTCCTTAATCAACAGCTGGCTTCGTCCATTCAAATAACGAACGAACGAC
AACCTCTTCACCCACTACCGCCTCAAACGCCCTCACATGAGCGATCAACA
ACAATAATGGTAGCCTCGCTACGAGTGAAAACGTCCATCAACTCTCATTG
CCACGGTTAACCCATTCTGATTGCCACCCCTCCTTTAATTTTCGGTATGA
ATCTTTGTATTGTTTTCTTAAAGTCTTTAACGCTGGTAAAGTTATTGAGG
CAATCTTATCAGTATTTGTTCCTTTTTTCTCGAATCAGGATAAATTCTGG
AATTTTGTTCAAGGCGCATAAAGATTTTCTGCATTCTGAGTGATTTGTGG
CTGGAGTGACACTTGTCATCGTTTCTGTAGTTGGGATTGTCGTCGTGCTG
CTTCATTAGTCTTTTAAAAGAGATGGGGATAAAGGGCTTCGATAAAAAGG
ATCCTAGCTCTTATTTTTTTTATTACCTTTGTATCTCTGTCTTATTATGG
TTAGGTCAAGTTAAATTTAGTTTGTGGTTAAGCACTCTGGTTAGAGATCG
ATGCGTTTTGTTTCTTTTTGTTTCGAAGAGTTCTAAATGTAGGAATAGAT
TAAATTTGCCCATTTGAAATTCGTTGAATATTTTGCATCTGCTTTCTTTT
TGAAATGGCAAGTTGTTGTTGTTACTTGAAGAAAAAGTG Coding sequence (CDS) from alignment at scaffold_355:211443..215531- >TCONS_00061297 ID=TCONS_00061297|Name=TCONS_00061297|organism=Clytia hemisphaerica|type=CDS|length=2748bp|location=Sequence derived from alignment at scaffold_355:211443..215531- (Clytia hemisphaerica)
GAAACCCAACATTGAACGAGATGAGAATTAATGCACCCGTCAACGGAGAT
AAATCATATCGACAGAACATACCTTTCACCCTAGCAGTCAACGAAACTAT
GGATGTTGAAGTTCATCAACGATACATAAGCAACGGTGAATATCGATATT
TCATTCGCATCAATAAAGAAGAAATTCATTCTGTCGTCAATACCCAAGCA
AAACAATTTTATAATGTTAAAGTGATTGCTGGTCAAAAATTCACTCGTGC
TGAGGTTTGCCCTGCATCAATTAAAAATGTCAAACACACGAACTTTCTGT
AAAAATAGCCTTACCAAAGCACTTCCGACTCGGAGTTATTCCAGTTTTAT
CTCCAGAATGGATTTTCAAATTCTCAATCCGTTTTCACTCGTTGGATTAT
GTCGGGGATGGAACATTCTCTTATTGCACACTTCTTCACCTCACTCAAGG
GGGAAACAATGATGTGTACGGGGATAGAACCCCAAATATTGCGATCGCAG
ATTTTGGGCATTCCAGAAAACAATCATGGACAGGAAGCAGTTACTTTTGT
TGGTGAACAAGAGGATTTCCAGTAAAGATAGCGAGAAATTTCTGCTCGAG
AAATTTATTTCCATATTTTCTAATATGTGGTTTGTTTTCTCTTTGATTTT
TCTTCCTCTATTATTCGTCAAATCAAAGTGTAATGAGGAAACCCAACATT
GAACGAGATGAGAATTAATGCACCCGTCAACGGAGATAAATCATATCGAC
AGAACATACCTTTCACCCTAGCAGTCAACGAAACTATGGATGTTGAAGTT
CATCAACGATACATAAGCAACGGTGAATATCGATATTTCATTCGCATCAA
TAAAGAAGAAATTCATTCTGTCGTCAATACCCAAGCAAAACAATTTTATA
ATGTTAAAGTGATTGCTGGTCAAAAATTCACTCGTGCTGAGGTTTGCCCT
GCATCAATTAAAAATGTCAAACACACGAACTTTCTGTAAAAATAGCCTTA
CCAAAGCACTTCCGACTCGGAGTTATTCCAGTTTTATCTCCAGAATGGAT
TTTCAAATTCTCAATCCGTTTTCACTCGTTGGATTATGTCGGGGATGGAA
CATTCTCTTATTGCACACTTCTTCACCTCACTCAAGGGGGAAACAATGAT
GTGTACGGGGATAGAACCCCAAATATTGCGATCGCAGATTTTGGGCATTC
CAGAAAACAATCATGGACAGGAAGCAGTTACTTTTGTTGGTGAACAAGAG
GATTTCCAGTAAAGATAGCGAGAAATTTCTGCTCGAGAAATTTATTTCCA
TATTTTCTAATATGTGGTTTGTTTTCTCTTTGATTTTTCTTCCTCTATTA
TTCGTCAAATCAAAGTGTAATGAGGAAACCCAACATTGAACGAGATGAGA
ATTAATGCACCCGTCAACGGAGATAAATCATATCGACAGAACATACCTTT
CACCCTAGCAGTCAACGAAACTATGGATGTTGAAGTTCATCAACGATACA
TAAGCAACGGTGAATATCGATATTTCATTCGCATCAATAAAGAAGAAATT
CATTCTGTCGTCAATACCCAAGCAAAACAATTTTATAATGTTAAAGTGAT
TGCTGGTCAAAAATTCACTCGTGCTGAGGTTTGCCCTGCATCAATTAAAA
ATGTCAAACACACGAACTTTCTGTAAAAATAGCCTTACCAAAGCACTTCC
GACTCGGAGTTATTCCAGTTTTATCTCCAGAATGGATTTTCAAATTCTCA
ATCCGTTTTCACTCGTTGGATTATGTCGGGGATGGAACATTCTCTTATTG
CACACTTCTTCACCTCACTCAAGGGGGAAACAATGATGTGTACGGGGATA
GAACCCCAAATATTGCGATCGCAGATTTTGGGCATTCCAGAAAACAATCA
TGGACAGGAAGCAGTTACTTTTGTTGGTGAACAAGAGGATTTCCAGTAAA
GATAGCGAGAAATTTCTGCTCGAGAAATTTATTTCCATATTTTCTAATAT
GTGGTTTGTTTTCTCTTTGATTTTTCTTCCTCTATTATTCGTCAAATCAA
AGTGTAATGAGGAAACCCAACATTGAACGAGATGAGAATTAATGCACCCG
TCAACGGAGATAAATCATATCGACAGAACATACCTTTCACCCTAGCAGTC
AACGAAACTATGGATGTTGAAGTTCATCAACGATACATAAGCAACGGTGA
ATATCGATATTTCATTCGCATCAATAAAGAAGAAATTCATTCTGTCGTCA
ATACCCAAGCAAAACAATTTTATAATGTTAAAGTGATTGCTGGTCAAAAA
TTCACTCGTGCTGAGGTTTGCCCTGCATCAATTAAAAATGTCAAACACAC
GAACTTTCTGTAAAAATAGCCTTACCAAAGCACTTCCGACTCGGAGTTAT
TCCAGTTTTATCTCCAGAATGGATTTTCAAATTCTCAATCCGTTTTCACT
CGTTGGATTATGTCGGGGATGGAACATTCTCTTATTGCACACTTCTTCAC
CTCACTCAAGGGGGAAACAATGATGTGTACGGGGATAGAACCCCAAATAT
TGCGATCGCAGATTTTGGGCATTCCAGAAAACAATCATGGACAGGAAGCA
GTTACTTTTGTTGGTGAACAAGAGGATTTCCAGTAAAGATAGCGAGAAAT
TTCTGCTCGAGAAATTTATTTCCATATTTTCTAATATGTGGTTTGTTTTC
TCTTTGATTTTTCTTCCTCTATTATTCGTCAAATCAAAGTGTAATGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
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| TCONS_00061297-exon-scaffold_355-1575043694:215404..215531 | TCONS_00061297-exon-scaffold_355-1575043694:215404..215531 | Clytia hemisphaerica | exon |
| TCONS_00061297-exon-scaffold_355-1575043694:214633..214693 | TCONS_00061297-exon-scaffold_355-1575043694:214633..214693 | Clytia hemisphaerica | exon |
| TCONS_00061297-exon-scaffold_355-1575043694:213981..214178 | TCONS_00061297-exon-scaffold_355-1575043694:213981..214178 | Clytia hemisphaerica | exon |
| TCONS_00061297-exon-scaffold_355-1575043694:211443..212932 | TCONS_00061297-exon-scaffold_355-1575043694:211443..212932 | Clytia hemisphaerica | exon |
| TCONS_00061297-exon-scaffold_355-1510915933:215404..215531 | TCONS_00061297-exon-scaffold_355-1510915933:215404..215531 | Clytia hemisphaerica | exon |
| TCONS_00061297-exon-scaffold_355-1510915933:214633..214693 | TCONS_00061297-exon-scaffold_355-1510915933:214633..214693 | Clytia hemisphaerica | exon |
| TCONS_00061297-exon-scaffold_355-1510915933:213981..214178 | TCONS_00061297-exon-scaffold_355-1510915933:213981..214178 | Clytia hemisphaerica | exon |
| TCONS_00061297-exon-scaffold_355-1510915933:211443..212932 | TCONS_00061297-exon-scaffold_355-1510915933:211443..212932 | Clytia hemisphaerica | exon |
| TCONS_00061297-exon-scaffold_355-1491911889:215404..215531 | TCONS_00061297-exon-scaffold_355-1491911889:215404..215531 | Clytia hemisphaerica | exon |
| TCONS_00061297-exon-scaffold_355-1491911889:214633..214693 | TCONS_00061297-exon-scaffold_355-1491911889:214633..214693 | Clytia hemisphaerica | exon |
| TCONS_00061297-exon-scaffold_355-1491911889:213981..214178 | TCONS_00061297-exon-scaffold_355-1491911889:213981..214178 | Clytia hemisphaerica | exon |
| TCONS_00061297-exon-scaffold_355-1491911889:211443..212932 | TCONS_00061297-exon-scaffold_355-1491911889:211443..212932 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_355 | supercontig | scaffold_355:211443..215531 - |
Blast
The following BLAST results are available for this feature:
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