TCONS_00061268 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061268
Unique NameTCONS_00061268
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length274

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061268 ID=TCONS_00061268|Name=TCONS_00061268|organism=Clytia hemisphaerica|type=transcript|length=274bp
CTGCCATAACCTTTAGCTTCGAGCTTCAAGGCTTTCAAATTTCGCACACA
GCTTTCAACGTGGTTGTAAAGCGTTCGAAGGCTCTTTATGTTGTCTTTTG
ATCTTATCTTCTGTATTCTCAAGAGGGATTGCATGTGTGACGAAATCAAA
ACTTGCTCGTTCCCATACCTCTCGCATAATATTTCTATGGCTTCTTTGTA
ATTATCAGAGTTTAGAGTCAAACCTTTAATCGAATCCAAGGCTTCGCCag
ccaaatattttttcaaaaaattaa
Run BLAST on NCBI

transcript from alignment at scaffold_354:993904..994177

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061268 ID=TCONS_00061268|Name=TCONS_00061268|organism=Clytia hemisphaerica|type=transcript|length=274bp|location=Sequence derived from alignment at scaffold_354:993904..994177 (Clytia hemisphaerica)
ttaattttttgaaaaaatatttggctGGCGAAGCCTTGGATTCGATTAAA
GGTTTGACTCTAAACTCTGATAATTACAAAGAAGCCATAGAAATATTATG
CGAGAGGTATGGGAACGAGCAAGTTTTGATTTCGTCACACATGCAATCCC
TCTTGAGAATACAGAAGATAAGATCAAAAGACAACATAAAGAGCCTTCGA
ACGCTTTACAACCACGTTGAAAGCTGTGTGCGAAATTTGAAAGCCTTGAA
GCTCGAAGCTAAAGGTTATGGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038438XLOC_038438Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061268-exon-scaffold_354-1491911889:993904..994177TCONS_00061268-exon-scaffold_354-1491911889:993904..994177Clytia hemisphaericaexon
TCONS_00061268-exon-scaffold_354-1510915933:993904..994177TCONS_00061268-exon-scaffold_354-1510915933:993904..994177Clytia hemisphaericaexon
TCONS_00061268-exon-scaffold_354-1575043694:993904..994177TCONS_00061268-exon-scaffold_354-1575043694:993904..994177Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_354supercontigscaffold_354:993904..994177 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.535875	1.04512	0.606745	0.593605	309.297	243.84	19.9796	21.9296	2.70943	11.7462	3.25748	2.14134	3.56393	3.70118	2.13001	3.91856	2.81595	3.71091	3.41788	8.94141	1.03623	1.51631	0	0.5586	3.45207	4.10785	0.73479	0	0.594779	1.21197
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061268 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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