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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061185 ID=TCONS_00061185|Name=TCONS_00061185|organism=Clytia hemisphaerica|type=transcript|length=3808bp
AGCCCTCCCAAATCACCGTGTTGACTGGTTACAGTGGACAGTTAACCGAG
CTTAAAAGGTTGATGCCGAGAACAGACTTCGAAGGAGTTCGCGTGACCAC
GGTTGATAATTTCCAAGGTgaagaaaatgacgtcatcctTTTGTCTCTTG
TCCGAAGCAACACTTCAGGAAGTATCGGCTTTTTGGGGACAGATAATCGA
GTCAATGTGGCGTTATCGAGAGCCAAGCACGGTATGTTCGTTATTGGTAA
TTTCGAATTACTGGAAGAGAAATCGAGATTGTGGCGAAACATTGTCGGTG
ATTGTCGACGTTACAAGTATTTGTCGCATGAGTTACAGCTGTATTGTCAA
AACCATCCAAAGACGAAAATCTCCGTCCGACAACCGATTGATTTTGATAA
AGCACCGGACGGTGGTTGTCAATTGGATTGTAAGCAGATCATGAGATGTG
GACATTTATGTTGGAAGAAATGCCATCCTGCTGATCCTGAACATTTGGAG
ATCAAATGTAGGGTTGCTTGCCCAAAGAAATGTAAAGCCTTTGGTCATCG
TTGTCGTGAGTTGTGTCATTATGGTGAAGAATGCAAACCGTGCCAATATT
ATGTGGACAAAGCCCTACCTTGCGGCCATGTGACCAAAATCGAATGCTGC
CGACACGAGATGGATCCCAATGAAATACGATGTTTGGATCCGTGTAAGAA
GACACGAAGTTGTGGTCATACATGCAAAGGTCAATGTTACGAAAATTGCG
CACAAGTGCCTTGTAAAGTTAAGGTTGAGAGAGAGTTGCCGTGTGGCCAT
AAAGCTATGGTTGATTGTAGTGCTGATTTGGAAACTAGGTGATGTTACAC
GAAAGTTGAGAAGGTTTTACCATGCGGACACACAGATACGCAGTTTTGTT
GTCTTGATGTCAAAGCGATTAAATGCAAGACGAAAGTCACAAAATGGCTC
AAGTGTGGACACGAAGCTTTGGTCGATTGCAGTACCGATGCAACGTTGGC
CAAATGTCAAACAAAGGTTTTGAAGTTGCTCTCGTGTGGTCATTCAATGA
AAGCTCCTTGTGACACTCCTCGATCGAGTATCAAATGCATTGAAATGACA
TCCAAGAAATTACCGTGTGATCACAAAGTGTCTGTAGAATGCAGTACTGA
TGTCAAGAAAGTCAAATGCACGGAGAAAGTCTTCAAAACACTCCCGTGTA
AAGAGCACCAAAAATACATGGAGTGTCACGAATCTGTTCAAAATGTCAAG
TGTGATAAACAGGCTTTGAAGACTGGCAAATGTGGGCATAACATGTGGGT
CAAATGCAGTCAACTTGTCAGCGAAGTTAAATGTGAAGCACAAGTTCTCT
TGCAGTTTATGTGTAACTGTCATATCAAGACTAGATGCTTCGCTCAAAAC
ACTACCAAACATTATTGCACTAAACCAGTCTTGAAGAAACAAGCTGAAAA
GCTGATTCAAAAAATTGAGCACAAAGTTTTGTTGACTGTTGCTGATACCA
CCAAGAGGAAGGAATTGACAGATTTAAAGATTGAGATCAAGAGACTAGCT
GAACAGCTAGATGATTGTACCGACATTTCTCCTACACAAGCCAAATTGAA
CGAGGTCGAGAAAAAATTGACCGGAAGCACAATGTCAGCCAAAAGTCTGG
CCAGAAGTTTTTCGAAATTGGAAATCTGATTTTGAAGaaattgatgtTTC
AAGTCTTTGGAAGCATGTTGGATAAGATGTTGGTTTTAACGAAGAGTGAA
TGGTAATGGTGAAGGAAGTGAAAAATTCGTAATTTGCCCAACAACGTGAT
GGTTCTtctgagtaaacaaaaaaaatcctgATAGTAtgacaagaaaacaa
aaacaaaaacaattcataTAATtacaatcaaaaaataaaaaaaatatttc
caaaataaAACGAACAAAAGATGACAGATTGAAATTGTAAAATTAGTCAG
TAGTCATTTGAAATTACGAAAGCAAAAACAATTAATTATTCTAATAAGCA
CcagtaaaatatgaaaatgttttatcaCGAACACTGCACAGTTTATCGCG
GCCGGAAAAAAGCAGAAAATAATTTACAATACCTGACGGCATATTTACCA
TCGAGGGTATACCAGGGTAATCACGAGGACGGACGTACATTGTGATTGGC
TGATGTAGTCAAAATACGAAACTTGATTGGTCGAAACTCACTaacttgtt
atttttttgtccgatatacttaacctcactatcgTAATATgaactttctt
tttcaaaaacctaaTTTATTACCTGAGAACAagaattttatcatatttaa
atttttttgagctTCAGTAGGACTTTTCAGTAAAGGGTATCGAATCATTA
CCATGCTTAGTGATCGGAATTCGTCCGATTTTCTCCACTTCTTTCCGCAC
ACTGTTCAGACAAGAGCGATTTTTTTAATTCACATAAAAGTTGATGAAAG
AAGTGTCagatgaaaaataagaaaatccggtAAAAAATTAAGTAATTGCT
TTTTTTTCCCGGACGGTattaacataaaaatatttaagtttATATAATAT
AACGTGTACaataaataccttaagggaactaatttttgcaggaactaaat
tttgcggtttttgcggatttaggcccaaaccgtaaaattaagttccgcaa
aatTTTTCAAATGCGAAAAACAAAGGTCGAATAATTCACAGTacggctct
aattttctttcaagtgagaaatccgcaaaattaagttcccgcaaatatta
aatatttaatcttgaactgcgaaccgcaaaaattagttcccgcaaaaaat
agttcctttaaggtataaGATATAAAAGTATTTCCTGAGTtttgttatgc
taaaaaatagaaaagaagtTGAGATATTTTTTAAGACCTTTTTTTGCTTT
AAGagtttatatatattttttgcaTCTCAACATAGGATTCTTCTGTTTGA
GAGCTGACGAATTAAGTCACGAGCCATTTGAAATTATCTGGTTTTAATTT
TGTTAATTATTAAGAATTTGTTAGAATTTAGATTtgtaatataaaaaaac
attattttgtaaaatcttttgatattaagACTTCTGCACCCTACACCCAA
GTAAGCTACGTTTCTTTTTGCTTCATGCTTCATTTCTAAGAGGAGATCTT
AGCAGGGAGATATATTTTGAATAAGAATTTGGTTAATTTTGGACCACAAT
TGACTgaacaaaacattgaaataaaaatgaaaatattgagatGTATATTA
CCTAAACTACAGAATAAAAATATTGTTCTTTTTAGCTACTATTACGCCCT
AAAAATCGCCCGTAGAAAATGGTTGATCGCTTTTACTTTTACATTCCTTT
ACACAATACATTCTTCGATGACAATGAATATATAAAAACTGTTCCTTAAT
TTCTAAAATAATACCTTTTTCAATGACCTTATAATCCACGAAATGCCGAA
TAAAGCTTTCCTAATGAGCGTTCCACCGATTACCTTTTACGAAATTACGA
AAtctttcaattcgtgttaataaaatgactagtaatattcgtgtaataag
gtaatacAAAACATAGCTTTTAAATTAGGCTGAAGGTTTCAGACCTACGA
CGTAATCTACAGGCTAATAAAAAATATAGATTCTAAAATAAGCCAACCCC
TTTTTCTAACAGTGACTGTTATAGcattttgatgttttgtaaTTCTAACG
TTACAACCAATTCTCCTGTGCTGACTTCGTGTAGTAAAAGACGTTTTGTG
ATTGGTCCAGAATGCTTCATAATTGATGCTATACTGACCTCAGTGCGACC
AAGGAAAT Run BLAST on NCBI protein sequence of TCONS_00061185-protein >TCONS_00061185-protein ID=TCONS_00061185-protein|Name=TCONS_00061185-protein|organism=Clytia hemisphaerica|type=polypeptide|length=279bp
PSQITVLTGYSGQLTELKRLMPRTDFEGVRVTTVDNFQGEENDVILLSLV
RSNTSGSIGFLGTDNRVNVALSRAKHGMFVIGNFELLEEKSRLWRNIVGD
CRRYKYLSHELQLYCQNHPKTKISVRQPIDFDKAPDGGCQLDCKQIMRCG
HLCWKKCHPADPEHLEIKCRVACPKKCKAFGHRCRELCHYGEECKPCQYY
VDKALPCGHVTKIECCRHEMDPNEIRCLDPCKKTRSCGHTCKGQCYENCA
QVPCKVKVERELPCGHKAMVDCSADLETR Run BLAST on NCBI transcript from alignment at scaffold_354:690555..695995- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061185 ID=TCONS_00061185|Name=TCONS_00061185|organism=Clytia hemisphaerica|type=transcript|length=5441bp|location=Sequence derived from alignment at scaffold_354:690555..695995- (Clytia hemisphaerica)
AGCCCTCCCAAATCACCGTGTTGACTGGTTACAGTGGACAGTTAACCGAG
CTTAAAAGGTTGATGCCGAGAACAGACTTCGAAGGAGTTCGCGTGACCAC
GGTTGATAATTTCCAAGGTGAAGAAAATGACGTCATCCTTTTGTCTCTTG
TCCGAAGCAACACTTCAGGAAGTATCGGCTTTTTGGGGACAGATAATCGA
GTCAATGTGGCGTTATCGAGAGCCAAGCACGGTATGTTCGTTATTGGTAA
TTTCGAATTACTGGAAGAGAAATCGAGATTGTGGCGAAACATTGTCGGTG
ATTGTCGACGTTACAAGTATTTGTCGCATGAGTTACAGCTGTATTGTCAA
AACCATCCAAAGACGAAAATCTCCGTCCGACAACCGATTGATTTTGATAA
AGCACCGGACGGTGGTTGTCAATTGGATTGTAAGCAGATCATGAGATGTG
GACATTTATGTTGGAAGAAATGCCATCCTGCTGATCCTGAACATTTGGAG
ATCAAATGTAGGGTTGCTTGCCCAAAGAAATGTAAAGCCTTTGGTCATCG
TTGTCGTGAGTTGTGTCATTATGGTGAAGAATGCAAACCGTGCCAATATT
ATGTGGACAAAGGTAAAATTGCTTTCTTACTCTAACATACAAACTTGGCA
ATTCGTGAAAATCGAGAAAATTATTTAACAATTTGAAAATCATAAAAGAT
CCAAATCTTACTTTAAGTTAAAATTCAAGGCTTATTTCTTGCCCCATTTT
TAAGTCCGTTAACACAACTTACTTACTCGGATCGAAGCAGTATATCTGAC
TATATTTTTCTGCTAAAGTAACGTTATCATGGATCGTCTATTAGATGTTT
ATCTTTAATATCGCATTTTTTTTTTAGCCCTACCTTGCGGCCATGTGACC
AAAATCGAATGCTGCCGACACGAGATGGATCCCAATGAAATACGATGTTT
GGATCCGTGTAAGAAGACACGAAGTTGTGGTCATACATGCAAAGGTCAAT
GTTACGAAAATTGCGCACAAGTGCCTTGTAAAGTTAAGGTTGAGAGAGAG
TTGCCGTGTGGCCATAAAGCTATGGTTGATTGTAGTGCTGATTTGGAAAC
TAGGTGATGTTACACGAAAGTTGAGAAGGTTTTACCATGCGGACACACAG
ATACGCAGTTTTGTTGTCTTGATGTCAAAGCGATTAAATGCAAGACGAAA
GTCACAAAATGGCTCAAGTGTGGACACGAAGCTTTGGTCGATTGCAGTAC
CGATGCAACGTTGGCCAAATGTCAAACAAAGGTTTTGAAGTTGCTCTCGT
GTGGTCATTCAATGAAAGCTCCTTGTGACACTCCTCGATCGAGTATCAAA
TGCATTGAAATGACATCCAAGAAATTACCGTGTGATCACAAAGTGTCTGT
AGAATGCAGTACTGATGTCAAGAAAGTCAAATGCACGGAGAAAGTCTTCA
AAACACTCCCGTGTAAAGAGCACCAAAAATACATGGAGTGTCACGAATCT
GTTCAAAATGTCAAGTGTGATAAACAGGCTTTGAAGACTGGCAAATGTGG
GCATAACATGTGGGTCAAATGCAGTCAACTTGTCAGCGAAGTTAAATGTG
AAGCACAAGTTCTCTTGCAGTTTATGTGTAACTGTCATATCAAGACTAGA
TGCTTCGCTCAAAACACTACCAAACATTATTGCACTAAACCAGTCTTGAA
GAAACAAGCTGAAAAGCTGATTCAAAAAATTGAGCACAAAGTTTTGTTGA
CTGTTGCTGATACCACCAAGAGGAAGGAATTGACAGATTTAAAGATTGAG
ATCAAGAGACTAGCTGAACAGCTAGATGATTGTACCGACATTTCTCCTAC
ACAAGCCAAATTGAACGAGGTCGAGAAAAAATTGACCGGAAGCACAATGT
CAGCCAAAAGTCTGGCCAGAAGTTTTTCGAAATTGGAAATCTGATTTTGA
AGGTAAACTGATTGAATTTACATTATAATTATATGGTTGATTACATTTAG
CTTAGATTTGTAAAGGACGAGCGGGGCGATAAATCCGTAATAGCCCCGCT
TTTTTGTAATCGCCCTGATTTAAACAAAAATTTCTATTGGTTGAAAGAAA
AGTATCGTACAATATTTTGATTGGTTAACAAAATATCGTACGAAATTTTA
AAGCCAATCAAAATAAGAATGTCAGTCGAATGTTTTTTTATAGTTTCGAA
TGTTTTTATAAGTTTCGAAAAGAATAGCAATTAAGTGTTCCTCAATTCTT
TTTTTTGACCATATAATTAACGGAATAACATGGTATTCTCGGGTGATTTT
GGATTAATAACCCCTCGTCATAGTTTTCAAAAAAGGAAACCAAAGAACTC
TTAAGGGCTCTGACCATAGTGAATTTTTCATAATTTCCCTATTTAAAATG
TGTTTTCTGACTGATTTAACCAACAAAACTATGGCATGTTATACATTTTC
TGTTAGACAAACTATTCCTGAATCTGAAAATTCAAAAATTGCATTGAAAA
AANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNAAGAGTATTTCAACTTTGAAGAGCTTAGTTTCGGCGA
AGAAAAAACATTTTGAAAAAATTTTCGCAGTAGATGGTGTATCTTTTACC
GAAAAATAAAAATTTTTGTAAATGCTTATTTGTCTCGAAATCTTCAAAAT
AGTGGTTTTTCATCAATTTTTCATCTGGATTTTGCTTAAAAAACAATCAT
AGCTTTTGACACATCCTTTTAGAAAAATTTTCCGCAAAATTTAAAATAGT
TCAATTCTTTTCGGACAGTGTAAAGAAATTTTGAAACAAAAAAGCTAATT
ACCCATGAAAACTAAGCACTTTTTATAAAAGAGGGTGATGCAACATATTA
TTAAAATCTTTCTAAAGTTCTGTTCATAACGTCATTTTTGCAATTAAATT
CTTAATTACTCTTAAGGGATTCGATTAAAAAGCAATTTATAAAGGCAATT
CTTTGTTAAAAGTGTTAAGGAACCTGAAATATAACTTTTATGTTCAAATA
CCAAAATCAATTTTTGGACTATGGTCAGAGCCCTTAAGAATTGCTAAAAT
TTACTCAAGTCATGGAAACTTCTGGTGAAATGGCGTAAATATCTCACTGC
GCACCGACAAGGACATTCTGTTTCCTCAAGTGTGACCCTTCCCCGTCTTT
AGGGGATCCAACTTTTCATGAAAGGCAAATGCTGACATCATGTCGGCATA
CGGAAAGGGTTAAGTATAGAAGGCAACAAGTAGGAGAAAAGGCGTTTTTT
AATATTATTTATTTTTTCAGAAATTGATGTTTCAAGTCTTTGGAAGCATG
TTGGATAAGATGTTGGTTTTAACGAAGAGTGAATGGTAATGGTGAAGGAA
GTGAAAAATTCGTAATTTGCCCAACAACGTGATGGTTCTTCTGAGTAAAC
AAAAAAAATCCTGATAGTATGACAAGAAAACAAAAACAAAAACAATTCAT
ATAATTACAATCAAAAAATAAAAAAAATATTTCCAAAATAAAACGAACAA
AAGATGACAGATTGAAATTGTAAAATTAGTCAGTAGTCATTTGAAATTAC
GAAAGCAAAAACAATTAATTATTCTAATAAGCACCAGTAAAATATGAAAA
TGTTTTATCACGAACACTGCACAGTTTATCGCGGCCGGAAAAAAGCAGAA
AATAATTTACAATACCTGACGGCATATTTACCATCGAGGGTATACCAGGG
TAATCACGAGGACGGACGTACATTGTGATTGGCTGATGTAGTCAAAATAC
GAAACTTGATTGGTCGAAACTCACTAACTTGTTATTTTTTTGTCCGATAT
ACTTAACCTCACTATCGTAATATGAACTTTCTTTTTCAAAAACCTAATTT
ATTACCTGAGAACAAGAATTTTATCATATTTAAATTTTTTTGAGCTTCAG
TAGGACTTTTCAGTAAAGGGTATCGAATCATTACCATGCTTAGTGATCGG
AATTCGTCCGATTTTCTCCACTTCTTTCCGCACACTGTTCAGACAAGAGC
GATTTTTTTAATTCACATAAAAGTTGATGAAAGAAGTGTCAGATGAAAAA
TAAGAAAATCCGGTAAAAAATTAAGTAATTGCTTTTTTTTCCCGGACGGT
ATTAACATAAAAATATTTAAGTTTATATAATATAACGTGTACAATAAATA
CCTTAAGGGAACTAATTTTTGCAGGAACTAAATTTTGCGGTTTTTGCGGA
TTTAGGCCCAAACCGTAAAATTAAGTTCCGCAAAATTTTTCAAATGCGAA
AAACAAAGGTCGAATAATTCACAGTACGGCTCTAATTTTCTTTCAAGTGA
GAAATCCGCAAAATTAAGTTCCCGCAAATATTAAATATTTAATCTTGAAC
TGCGAACCGCAAAAATTAGTTCCCGCAAAAAATAGTTCCTTTAAGGTATA
AGATATAAAAGTATTTCCTGAGTTTTGTTATGCTAAAAAATAGAAAAGAA
GTTGAGATATTTTTTAAGACCTTTTTTTGCTTTAAGAGTTTATATATATT
TTTTGCATCTCAACATAGGATTCTTCTGTTTGAGAGCTGACGAATTAAGT
CACGAGCCATTTGAAATTATCTGGTTTTAATTTTGTTAATTATTAAGAAT
TTGTTAGAATTTAGATTTGTAATATAAAAAAACATTATTTTGTAAAATCT
TTTGATATTAAGACTTCTGCACCCTACACCCAAGTAAGCTACGTTTCTTT
TTGCTTCATGCTTCATTTCTAAGAGGAGATCTTAGCAGGGAGATATATTT
TGAATAAGAATTTGGTTAATTTTGGACCACAATTGACTGAACAAAACATT
GAAATAAAAATGAAAATATTGAGATGTATATTACCTAAACTACAGAATAA
AAATATTGTTCTTTTTAGCTACTATTACGCCCTAAAAATCGCCCGTAGAA
AATGGTTGATCGCTTTTACTTTTACATTCCTTTACACAATACATTCTTCG
ATGACAATGAATATATAAAAACTGTTCCTTAATTTCTAAAATAATACCTT
TTTCAATGACCTTATAATCCACGAAATGCCGAATAAAGCTTTCCTAATGA
GCGTTCCACCGATTACCTTTTACGAAATTACGAAATCTTTCAATTCGTGT
TAATAAAATGACTAGTAATATTCGTGTAATAAGGTAATACAAAACATAGC
TTTTAAATTAGGCTGAAGGTTTCAGACCTACGACGTAATCTACAGGCTAA
TAAAAAATATAGATTCTAAAATAAGCCAACCCCTTTTTCTAACAGTGACT
GTTATAGCATTTTGATGTTTTGTAATTCTAACGTTACAACCAATTCTCCT
GTGCTGACTTCGTGTAGTAAAAGACGTTTTGTGATTGGTCCAGAATGCTT
CATAATTGATGCTATACTGACCTCAGTGCGACCAAGGAAAT Coding sequence (CDS) from alignment at scaffold_354:690555..695995- >TCONS_00061185 ID=TCONS_00061185|Name=TCONS_00061185|organism=Clytia hemisphaerica|type=CDS|length=1680bp|location=Sequence derived from alignment at scaffold_354:690555..695995- (Clytia hemisphaerica)
CCCTACCTTGCGGCCATGTGACCAAAATCGAATGCTGCCGACACGAGATG
GATCCCAATGAAATACGATGTTTGGATCCGTGTAAGAAGACACGAAGTTG
TGGTCATACATGCAAAGGTCAATGTTACGAAAATTGCGCACAAGTGCCTT
GTAAAGTTAAGGTTGAGAGAGAGTTGCCGTGTGGCCATAAAGCTATGGTT
GATTGTAGTGCTGATTTGGAAACTAGGTGACCCTCCCAAATCACCGTGTT
GACTGGTTACAGTGGACAGTTAACCGAGCTTAAAAGGTTGATGCCGAGAA
CAGACTTCGAAGGAGTTCGCGTGACCACGGTTGATAATTTCCAAGGTGAA
GAAAATGACGTCATCCTTTTGTCTCTTGTCCGAAGCAACACTTCAGGAAG
TATCGGCTTTTTGGGGACAGATAATCGAGTCAATGTGGCGTTATCGAGAG
CCAAGCACGGTATGTTCGTTATTGGTAATTTCGAATTACTGGAAGAGAAA
TCGAGATTGTGGCGAAACATTGTCGGTGATTGTCGACGTTACAAGTATTT
GTCGCATGAGTTACAGCTGTATTGTCAAAACCATCCAAAGACGAAAATCT
CCGTCCGACAACCGATTGATTTTGATAAAGCACCGGACGGTGGTTGTCAA
TTGGATTGTAAGCAGATCATGAGATGTGGACATTTATGTTGGAAGAAATG
CCATCCTGCTGATCCTGAACATTTGGAGATCAAATGTAGGGTTGCTTGCC
CAAAGAAATGTAAAGCCTTTGGTCATCGTTGTCGTGAGTTGTGTCATTAT
GGTGAAGAATGCAAACCGTGCCAATATTATGTGGACAAAGCCCTACCTTG
CGGCCATGTGACCAAAATCGAATGCTGCCGACACGAGATGGATCCCAATG
AAATACGATGTTTGGATCCGTGTAAGAAGACACGAAGTTGTGGTCATACA
TGCAAAGGTCAATGTTACGAAAATTGCGCACAAGTGCCTTGTAAAGTTAA
GGTTGAGAGAGAGTTGCCGTGTGGCCATAAAGCTATGGTTGATTGTAGTG
CTGATTTGGAAACTAGGTGACCCTCCCAAATCACCGTGTTGACTGGTTAC
AGTGGACAGTTAACCGAGCTTAAAAGGTTGATGCCGAGAACAGACTTCGA
AGGAGTTCGCGTGACCACGGTTGATAATTTCCAAGGTGAAGAAAATGACG
TCATCCTTTTGTCTCTTGTCCGAAGCAACACTTCAGGAAGTATCGGCTTT
TTGGGGACAGATAATCGAGTCAATGTGGCGTTATCGAGAGCCAAGCACGG
TATGTTCGTTATTGGTAATTTCGAATTACTGGAAGAGAAATCGAGATTGT
GGCGAAACATTGTCGGTGATTGTCGACGTTACAAGTATTTGTCGCATGAG
TTACAGCTGTATTGTCAAAACCATCCAAAGACGAAAATCTCCGTCCGACA
ACCGATTGATTTTGATAAAGCACCGGACGGTGGTTGTCAATTGGATTGTA
AGCAGATCATGAGATGTGGACATTTATGTTGGAAGAAATGCCATCCTGCT
GATCCTGAACATTTGGAGATCAAATGTAGGGTTGCTTGCCCAAAGAAATG
TAAAGCCTTTGGTCATCGTTGTCGTGAGTTGTGTCATTATGGTGAAGAAT
GCAAACCGTGCCAATATTATGTGGACAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061185-exon-scaffold_354-1575043694:695384..695995 | TCONS_00061185-exon-scaffold_354-1575043694:695384..695995 | Clytia hemisphaerica | exon |
| TCONS_00061185-exon-scaffold_354-1575043694:694044..695118 | TCONS_00061185-exon-scaffold_354-1575043694:694044..695118 | Clytia hemisphaerica | exon |
| TCONS_00061185-exon-scaffold_354-1575043694:690555..692675 | TCONS_00061185-exon-scaffold_354-1575043694:690555..692675 | Clytia hemisphaerica | exon |
| TCONS_00061185-exon-scaffold_354-1510915933:695384..695995 | TCONS_00061185-exon-scaffold_354-1510915933:695384..695995 | Clytia hemisphaerica | exon |
| TCONS_00061185-exon-scaffold_354-1510915933:694044..695118 | TCONS_00061185-exon-scaffold_354-1510915933:694044..695118 | Clytia hemisphaerica | exon |
| TCONS_00061185-exon-scaffold_354-1510915933:690555..692675 | TCONS_00061185-exon-scaffold_354-1510915933:690555..692675 | Clytia hemisphaerica | exon |
| TCONS_00061185-exon-scaffold_354-1491911889:695384..695995 | TCONS_00061185-exon-scaffold_354-1491911889:695384..695995 | Clytia hemisphaerica | exon |
| TCONS_00061185-exon-scaffold_354-1491911889:694044..695118 | TCONS_00061185-exon-scaffold_354-1491911889:694044..695118 | Clytia hemisphaerica | exon |
| TCONS_00061185-exon-scaffold_354-1491911889:690555..692675 | TCONS_00061185-exon-scaffold_354-1491911889:690555..692675 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_354 | supercontig | scaffold_354:690555..695995 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR027417 | P-loop_NTPase |
Blast
BLAST of TCONS_00061185 vs. Swiss-Prot (Human)
Match: ZNFX1 (NFX1-type zinc finger-containing protein 1 OS=Homo sapiens GN=ZNFX1 PE=2 SV=2) HSP 1 Score: 243.432 bits (620), Expect = 5.091e-65 Identity = 152/357 (42.58%), Postives = 190/357 (53.22%), Query Frame = 3
Query: 3 PSQITVLTGYSGQLTELKRLMPRTDFEGVRVTTVDNFQGEENDVILLSLVRSNTSGSIGFLGTDNRVNVALSRAKHGMFVIGNFELLEEKSRLWRNIVGDCRRYKYLSHELQLYCQNHPKTKISVRQPIDFDKAPDGGCQLDCKQIMRCGHLCWKKCHPADPEHLEIKCRVACPKKCKAFGHRCRELCHYGEECKPCQYYVDKALP-CGHVTKIECCRHEMDPNEIRCLDPCKKTRSCGHTCKGQCYENCAQVPCKVKVERELPCGHKAMVDCSADLETR*CYTKVEKVLPCGHTDTQFCCLDVKAIKCKTKVTKWLKCGHEALVDCST---DATLAKCQTKVLKLLSCGHSMKAPC 1061
PSQIT+LT Y+GQL L++LMP F GVRV VD +QGEEND+ILLSLVRSN G +GFL NR+ VALSRAK GM+ IGN ++L K LW I+ R + L+L CQNHP+T V + DF K P+GGC L C+ + CGH+C + CHP D H E +C C K GHRC +C +EC+PCQ V K +P CGH + C E D C +PC K+ CGH C C E+C Q+ C V +L CGH V C VE +L G +KC TK L CGH C + +CQ +LL C H + PC
Sbjct: 1151 PSQITILTTYTGQLFCLRKLMPAKTFAGVRVHVVDKYQGEENDIILLSLVRSNQEGKVGFLQISNRICVALSRAKKGMYCIGNMQML-AKVPLWSKIIHTLRENNQIGPMLRLCCQNHPETHTLVSKASDFQKVPEGGCSLPCEFRLGCGHVCTRACHPYDSSHKEFQCMKPCQKVICQEGHRCPLVCF--QECQPCQVKVPKTIPRCGHEQMVPCSVPESD---FCCQEPCSKSLRCGHRCSHPCGEDCVQL-CSEMVTIKLKCGHSQPVKCG----------HVEGLLYGG-----------LLVKCTTKCGTILDCGHPCPGSCHSCFEGRFHERCQQPCKRLLICSHKCQEPC 1479
The following BLAST results are available for this feature:
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