XLOC_038377 (gene) - C. hemisphaerica

Overview
NameXLOC_038377
Unique NameXLOC_038377
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_354:690555..695995-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038377 ID=XLOC_038377|Name=XLOC_038377|organism=Clytia hemisphaerica|type=gene|length=5441bp|location=Sequence derived from alignment at scaffold_354:690555..695995- (Clytia hemisphaerica)
AGCCCTCCCAAATCACCGTGTTGACTGGTTACAGTGGACAGTTAACCGAG CTTAAAAGGTTGATGCCGAGAACAGACTTCGAAGGAGTTCGCGTGACCAC GGTTGATAATTTCCAAGGTGAAGAAAATGACGTCATCCTTTTGTCTCTTG TCCGAAGCAACACTTCAGGAAGTATCGGCTTTTTGGGGACAGATAATCGA GTCAATGTGGCGTTATCGAGAGCCAAGCACGGTATGTTCGTTATTGGTAA TTTCGAATTACTGGAAGAGAAATCGAGATTGTGGCGAAACATTGTCGGTG ATTGTCGACGTTACAAGTATTTGTCGCATGAGTTACAGCTGTATTGTCAA AACCATCCAAAGACGAAAATCTCCGTCCGACAACCGATTGATTTTGATAA AGCACCGGACGGTGGTTGTCAATTGGATTGTAAGCAGATCATGAGATGTG GACATTTATGTTGGAAGAAATGCCATCCTGCTGATCCTGAACATTTGGAG ATCAAATGTAGGGTTGCTTGCCCAAAGAAATGTAAAGCCTTTGGTCATCG TTGTCGTGAGTTGTGTCATTATGGTGAAGAATGCAAACCGTGCCAATATT ATGTGGACAAAGGTAAAATTGCTTTCTTACTCTAACATACAAACTTGGCA ATTCGTGAAAATCGAGAAAATTATTTAACAATTTGAAAATCATAAAAGAT CCAAATCTTACTTTAAGTTAAAATTCAAGGCTTATTTCTTGCCCCATTTT TAAGTCCGTTAACACAACTTACTTACTCGGATCGAAGCAGTATATCTGAC TATATTTTTCTGCTAAAGTAACGTTATCATGGATCGTCTATTAGATGTTT ATCTTTAATATCGCATTTTTTTTTTAGCCCTACCTTGCGGCCATGTGACC AAAATCGAATGCTGCCGACACGAGATGGATCCCAATGAAATACGATGTTT GGATCCGTGTAAGAAGACACGAAGTTGTGGTCATACATGCAAAGGTCAAT GTTACGAAAATTGCGCACAAGTGCCTTGTAAAGTTAAGGTTGAGAGAGAG TTGCCGTGTGGCCATAAAGCTATGGTTGATTGTAGTGCTGATTTGGAAAC TAGGTGATGTTACACGAAAGTTGAGAAGGTTTTACCATGCGGACACACAG ATACGCAGTTTTGTTGTCTTGATGTCAAAGCGATTAAATGCAAGACGAAA GTCACAAAATGGCTCAAGTGTGGACACGAAGCTTTGGTCGATTGCAGTAC CGATGCAACGTTGGCCAAATGTCAAACAAAGGTTTTGAAGTTGCTCTCGT GTGGTCATTCAATGAAAGCTCCTTGTGACACTCCTCGATCGAGTATCAAA TGCATTGAAATGACATCCAAGAAATTACCGTGTGATCACAAAGTGTCTGT AGAATGCAGTACTGATGTCAAGAAAGTCAAATGCACGGAGAAAGTCTTCA AAACACTCCCGTGTAAAGAGCACCAAAAATACATGGAGTGTCACGAATCT GTTCAAAATGTCAAGTGTGATAAACAGGCTTTGAAGACTGGCAAATGTGG GCATAACATGTGGGTCAAATGCAGTCAACTTGTCAGCGAAGTTAAATGTG AAGCACAAGTTCTCTTGCAGTTTATGTGTAACTGTCATATCAAGACTAGA TGCTTCGCTCAAAACACTACCAAACATTATTGCACTAAACCAGTCTTGAA GAAACAAGCTGAAAAGCTGATTCAAAAAATTGAGCACAAAGTTTTGTTGA CTGTTGCTGATACCACCAAGAGGAAGGAATTGACAGATTTAAAGATTGAG ATCAAGAGACTAGCTGAACAGCTAGATGATTGTACCGACATTTCTCCTAC ACAAGCCAAATTGAACGAGGTCGAGAAAAAATTGACCGGAAGCACAATGT CAGCCAAAAGTCTGGCCAGAAGTTTTTCGAAATTGGAAATCTGATTTTGA AGGTAAACTGATTGAATTTACATTATAATTATATGGTTGATTACATTTAG CTTAGATTTGTAAAGGACGAGCGGGGCGATAAATCCGTAATAGCCCCGCT TTTTTGTAATCGCCCTGATTTAAACAAAAATTTCTATTGGTTGAAAGAAA AGTATCGTACAATATTTTGATTGGTTAACAAAATATCGTACGAAATTTTA AAGCCAATCAAAATAAGAATGTCAGTCGAATGTTTTTTTATAGTTTCGAA TGTTTTTATAAGTTTCGAAAAGAATAGCAATTAAGTGTTCCTCAATTCTT TTTTTTGACCATATAATTAACGGAATAACATGGTATTCTCGGGTGATTTT GGATTAATAACCCCTCGTCATAGTTTTCAAAAAAGGAAACCAAAGAACTC TTAAGGGCTCTGACCATAGTGAATTTTTCATAATTTCCCTATTTAAAATG TGTTTTCTGACTGATTTAACCAACAAAACTATGGCATGTTATACATTTTC TGTTAGACAAACTATTCCTGAATCTGAAAATTCAAAAATTGCATTGAAAA AANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNAAGAGTATTTCAACTTTGAAGAGCTTAGTTTCGGCGA AGAAAAAACATTTTGAAAAAATTTTCGCAGTAGATGGTGTATCTTTTACC GAAAAATAAAAATTTTTGTAAATGCTTATTTGTCTCGAAATCTTCAAAAT AGTGGTTTTTCATCAATTTTTCATCTGGATTTTGCTTAAAAAACAATCAT AGCTTTTGACACATCCTTTTAGAAAAATTTTCCGCAAAATTTAAAATAGT TCAATTCTTTTCGGACAGTGTAAAGAAATTTTGAAACAAAAAAGCTAATT ACCCATGAAAACTAAGCACTTTTTATAAAAGAGGGTGATGCAACATATTA TTAAAATCTTTCTAAAGTTCTGTTCATAACGTCATTTTTGCAATTAAATT CTTAATTACTCTTAAGGGATTCGATTAAAAAGCAATTTATAAAGGCAATT CTTTGTTAAAAGTGTTAAGGAACCTGAAATATAACTTTTATGTTCAAATA CCAAAATCAATTTTTGGACTATGGTCAGAGCCCTTAAGAATTGCTAAAAT TTACTCAAGTCATGGAAACTTCTGGTGAAATGGCGTAAATATCTCACTGC GCACCGACAAGGACATTCTGTTTCCTCAAGTGTGACCCTTCCCCGTCTTT AGGGGATCCAACTTTTCATGAAAGGCAAATGCTGACATCATGTCGGCATA CGGAAAGGGTTAAGTATAGAAGGCAACAAGTAGGAGAAAAGGCGTTTTTT AATATTATTTATTTTTTCAGAAATTGATGTTTCAAGTCTTTGGAAGCATG TTGGATAAGATGTTGGTTTTAACGAAGAGTGAATGGTAATGGTGAAGGAA GTGAAAAATTCGTAATTTGCCCAACAACGTGATGGTTCTTCTGAGTAAAC AAAAAAAATCCTGATAGTATGACAAGAAAACAAAAACAAAAACAATTCAT ATAATTACAATCAAAAAATAAAAAAAATATTTCCAAAATAAAACGAACAA AAGATGACAGATTGAAATTGTAAAATTAGTCAGTAGTCATTTGAAATTAC GAAAGCAAAAACAATTAATTATTCTAATAAGCACCAGTAAAATATGAAAA TGTTTTATCACGAACACTGCACAGTTTATCGCGGCCGGAAAAAAGCAGAA AATAATTTACAATACCTGACGGCATATTTACCATCGAGGGTATACCAGGG TAATCACGAGGACGGACGTACATTGTGATTGGCTGATGTAGTCAAAATAC GAAACTTGATTGGTCGAAACTCACTAACTTGTTATTTTTTTGTCCGATAT ACTTAACCTCACTATCGTAATATGAACTTTCTTTTTCAAAAACCTAATTT ATTACCTGAGAACAAGAATTTTATCATATTTAAATTTTTTTGAGCTTCAG TAGGACTTTTCAGTAAAGGGTATCGAATCATTACCATGCTTAGTGATCGG AATTCGTCCGATTTTCTCCACTTCTTTCCGCACACTGTTCAGACAAGAGC GATTTTTTTAATTCACATAAAAGTTGATGAAAGAAGTGTCAGATGAAAAA TAAGAAAATCCGGTAAAAAATTAAGTAATTGCTTTTTTTTCCCGGACGGT ATTAACATAAAAATATTTAAGTTTATATAATATAACGTGTACAATAAATA CCTTAAGGGAACTAATTTTTGCAGGAACTAAATTTTGCGGTTTTTGCGGA TTTAGGCCCAAACCGTAAAATTAAGTTCCGCAAAATTTTTCAAATGCGAA AAACAAAGGTCGAATAATTCACAGTACGGCTCTAATTTTCTTTCAAGTGA GAAATCCGCAAAATTAAGTTCCCGCAAATATTAAATATTTAATCTTGAAC TGCGAACCGCAAAAATTAGTTCCCGCAAAAAATAGTTCCTTTAAGGTATA AGATATAAAAGTATTTCCTGAGTTTTGTTATGCTAAAAAATAGAAAAGAA GTTGAGATATTTTTTAAGACCTTTTTTTGCTTTAAGAGTTTATATATATT TTTTGCATCTCAACATAGGATTCTTCTGTTTGAGAGCTGACGAATTAAGT CACGAGCCATTTGAAATTATCTGGTTTTAATTTTGTTAATTATTAAGAAT TTGTTAGAATTTAGATTTGTAATATAAAAAAACATTATTTTGTAAAATCT TTTGATATTAAGACTTCTGCACCCTACACCCAAGTAAGCTACGTTTCTTT TTGCTTCATGCTTCATTTCTAAGAGGAGATCTTAGCAGGGAGATATATTT TGAATAAGAATTTGGTTAATTTTGGACCACAATTGACTGAACAAAACATT GAAATAAAAATGAAAATATTGAGATGTATATTACCTAAACTACAGAATAA AAATATTGTTCTTTTTAGCTACTATTACGCCCTAAAAATCGCCCGTAGAA AATGGTTGATCGCTTTTACTTTTACATTCCTTTACACAATACATTCTTCG ATGACAATGAATATATAAAAACTGTTCCTTAATTTCTAAAATAATACCTT TTTCAATGACCTTATAATCCACGAAATGCCGAATAAAGCTTTCCTAATGA GCGTTCCACCGATTACCTTTTACGAAATTACGAAATCTTTCAATTCGTGT TAATAAAATGACTAGTAATATTCGTGTAATAAGGTAATACAAAACATAGC TTTTAAATTAGGCTGAAGGTTTCAGACCTACGACGTAATCTACAGGCTAA TAAAAAATATAGATTCTAAAATAAGCCAACCCCTTTTTCTAACAGTGACT GTTATAGCATTTTGATGTTTTGTAATTCTAACGTTACAACCAATTCTCCT GTGCTGACTTCGTGTAGTAAAAGACGTTTTGTGATTGGTCCAGAATGCTT CATAATTGATGCTATACTGACCTCAGTGCGACCAAGGAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061185TCONS_00061185Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061185-proteinTCONS_00061185-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_354supercontigscaffold_354:690555..695995 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.75 0.68 0.42 0.27 0.64 0.39 0.81 1.12 0.47 2.79 0.54 0.43 1.11 0.8 0.69 0.8 1.18 0.95 0.42 1.32 0.67 0.52 2.6 3.17 6.19 6.48 2.71 2.99 2.69 2.44