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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061152 ID=TCONS_00061152|Name=TCONS_00061152|organism=Clytia hemisphaerica|type=transcript|length=900bp GTCTGCATTTGaacaaatgaacaaattttagaACAATTCACATATTTTCG AAAGGTCGTGGCGTCTTCGTACGGAGTATAGATTGAACATAATAGAAATA TGAGTGGAACGCCCCCAATAAACATTCAAAAGGAGACAACAActcctgaa aaaagaaaaagtggaGGGGAGTTTGCTGTACCAAGCACCCCACCAAAACA TACCTCGCCACGTCATCATCCATATTTTCAACATCATGGATTGACAGTAC CATCTCCTATACCATGTAGAAGAACTCGAACCACATCTGTGTCGAGATTA GCAGCAGACAGTCCATTACAGCAAGGAATTGTGGTCAGCTTTTGTCGTGA AAAGGGACATGGATTTGTCAAGCCAGATGATGAAGAGAAGGCAATTTTTC TACACATTTCTGATATCGAAGACGATTATGTCGTCCGAAAAGGAGACCGG GTCGAGTTTAGAACCATCCCCATGCCACCAAAAAAAGTTGAGCGCATGGC TGTCGAAGTTCATTTAATTTCATTGGATGAAAGTGCGCCACACGAAAGAT GGGACAACCAACCTGATGTGTAGATAAACCGAATTTTCCGTAAATCTTAT TAATAATAAGACTAATTTTTGTGATTCCGATAAAAGTCGGATTATCTCAT GATTATTTCCGGTTATCGGATATAGTTCGTTAGGGATTTAAGGCCCTTAA TTGTATGATAGGTATTAACAGTAACATTGTGAGAAACACCAtgcatttta tgattttaatatTATATTAATAGGGCTTTGAGTCAAAATTGCTAAATTTT CTGTTCTATCTTCTTGGGTTTCACAAATGAACTTTAATAAAGATGACTAG TTGGGTATAAGATATCAGAAAGTTTTCAACTCTTTATTAGGCtatttcag Run BLAST on NCBI protein sequence of TCONS_00061152-protein >TCONS_00061152-protein ID=TCONS_00061152-protein|Name=TCONS_00061152-protein|organism=Clytia hemisphaerica|type=polypeptide|length=157bp
MSGTPPINIQKETTTPEKRKSGGEFAVPSTPPKHTSPRHHPYFQHHGLTV PSPIPCRRTRTTSVSRLAADSPLQQGIVVSFCREKGHGFVKPDDEEKAIF LHISDIEDDYVVRKGDRVEFRTIPMPPKKVERMAVEVHLISLDESAPHER WDNQPDV Run BLAST on NCBI transcript from alignment at scaffold_354:140735..158607- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061152 ID=TCONS_00061152|Name=TCONS_00061152|organism=Clytia hemisphaerica|type=transcript|length=17873bp|location=Sequence derived from alignment at scaffold_354:140735..158607- (Clytia hemisphaerica) GTCTGCATTTGAACAAATGAACAAATTTTAGAACAATTCACATATTTTCG
AAAGGTCGTGGCGTCTTCGTACGGGTGAGAGTAGATCTTGTATATCTCTA
TCTTTGATCTGGAGTTCCTGAACCTTTAGGATGTAACTTGGTCTTGGCAG
TTTCCATCAATATTAGGCAGTGTAGACCTAACTGTTCATACAAAAATTAC
GGGAAACGCATATTTGGACTTTGTACCCTATGCTGCACTCAAGCACTTAA
GCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAT
TATCAGGGAAACAAGTAAAAAAAACTGCATCCAGGTATCTATTTTCTTTC
CAAAGATATTCATGTTTTTCGACGTCAAGGTGAAAACGCAATTTAGCGCC
GACCACGGCACCGGAAAATTCTCGACCCACATTGAAACAAGTGGCTGTCG
CTATTGAGCTGGTTCATCTTTTCAATCGCGGTTTTTTTAGTAAACCCAGG
GTAAGATTAGGCTACAATCTATCACATGCTGCTTTATTTAAAAACCTAAA
GGCTGTCTGGAATTTTGAAAAAATAGAAGGAATTGCAATTTTTCAACAAG
ATTGCGGATTTTTTCATGTAAGCAGCATACACTATCTGAAAGCTGAGGAT
TTCAGCTTTCTAGTGGTGAAATTTGTTTTTAGGGGTCGGCGACAAACGAC
TTTCCTTTTTTTTAACGGCCTGAGGCCGTTAAGGTTCAGACCCCCTCCCC
CCTACGTCTTAAGCGGCCAAGAAAATTCTTCAAAAGTAAATACTTTCACT
GGTCCATGGCCGCCATGTTCTTTCAATTCGTAATCCTCAAAGTTCTTNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCAATGGGAATCAAAACTA
TAAAGTGCACTTACAAACATCAATTTGTCAGATCTAACAAAATTAATAAC
CGCACTGTCATCATTGACAATAAAACATACGATTTTCTGTCAAGCGCCTT
GTAAACATTCCAACAACTTCCATCGAAATGATCTATCACAGCTCAGTCTA
CCATTTTTAGCGCAGTCCAAGGATTGAGCCGAGAACGCTCCCCNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCCCA
AACAATTATTGGGAGTGTCTAAAACAGACAAAAATTTACTCACTTCAAAG
GCGAAGAGAGCGCTACAGAATAATGTATGTCTGGAAGGTGATGGGTGGAG
CAAGGAGTCAACTGAGGTGGAGGGAAATAATTGCCGACTTTCGTCACGTG
ACCAGTCATTTTTCTCGTCAAAGCATTAATTGGTGACCGGGAATAAGGTG
AATGTTGTGTGGTTGCTTTGGTCTTAGCCTTTCTTCACATATTTCTACTT
TTTGGACTGATGAAATTTGTAAGTGAGGCCGTTAAGGTTCAGACCCCCTC
CCCCCCTACGTCTTAGCGGCCAAGAAAATTCTTCAAAAGTAAATACTTTC
ACTGGTCCATGGTCGCCATGTTCTTTCGATTCGTAATCCTCAAAGTTCTT
CTTTTCGCACGGAAAAAACATGTGGTTTTGAGCTGTGACCTTTCCAATTT
TGAAACTCCAAGCCCCGCAGCAAGTCAGGGCGGGATGGGTGGAGCAAGGA
GTCAACTGAGGCGGAGGGAAAAATTGCCAACTTTCGTCAAGTGACCGGTC
ATTTTTCTCGTCGAAGCATTAATTGGTGACCGGGAATAAGGTGAATTTCG
TGTGGTTGCTTTGGTCTTAGCCTTTCTTCACATGTTTTTACTTTTTGGAC
TGATGAAATTTGTAAGTGAGACTTTCCTTTTTTTTTTTAACTTTTTTAAC
GGCATTGCAGTGACCCCCTCCCACCCCTTACGGCCAGAAGCCGTTAAAAG
AAAGGAATATCGTTTGTCGACGGCCCCTTAGCTATCATTTCCAGCTCATT
AGCGATAAGCTAAAGTTTAACAGTCATCGGGCCGGTTTTCAGCATTTCAT
TGTTGAAAAAATTGCTGTTTTCGGCAATAACAGCTTCTGAATTTTTTCAA
CTGAGTGTATAGCAGTCAAAATTGAAACATTTAAAAACCAGTTGTTATAC
TATNAATTCCAAAGACACTGAGTGTATAGCAGTCAAAATTGAAACATTTA
AAAAACCAGTTGTTATAGTTTCTGCTTACAGAGCACCAGAAACAAAATTG
CCATACCTCGAAAATTTAACAAGGGACATTAAATCAATTGCCTCAAAGTA
CGAGACAAGTCCAATCTGGATTGGGGGCGACTGGAATCTACCTGAATTGA
CTGGTCAACAAACTCAATCGTCAGTCACAATTACTCAAAACAAATCAACG
AAACAGCAATTAAAATACTTTATGACTGTAACCTTGACCAAATCATTGAC
TTTCGAACAAGAATAAACAATACCCTTGATATAATATTGACAAATAACTC
TTCACTCCTGTCAGATGTGAAGGATTTCCCAGGGATAAGTGATCACACTG
CTATTGGCGTAATTGACGTTATGTGCCATCCTATCAGTCAGCGCTCAATT
AAAAGAACAGTCCATGTATGGAGTAGAGCGAACATTCCATCACTGAAAGA
AGACCTAAAAACAACATGTGCACTATTCTGTGCTAAACATGACAATGGAG
ATTTTGCTATTGACACGATATGGGGCGAGACATTATCAACGAAACCATGA
GAAAGATACCAACCAAAACTCTACGTCAAAGATTCAGCCAGCCATGGGTA
AATCGGAAGTGTAGAAGATTATCCCGCAGAAAGAAACGCCTATACAAACG
CCCAAAACGAACACGACTCGAATCAGATTGGTCCAGGTTTCGAAATGTTG
TCAATGAGTGCCGAAAACAGTGTCGTAAAGCACATGAATGACAAGTACAT
CAATGAAAACATCCTAGAATCATCTGACACCAAGCGCTTTTACAAGTATA
TCAAAGATAAACAAAAAGACAATATCACAGTTGCCCCATTAAAGAAGAAT
GGGAGTCTATCATCGACGATCAGAAAAAAGAAATATCCTTAATGAACAGT
ATTGTAGTGTTTTCTCTATTTGTAACAATAGATATACCACCCATTAGATC
GCCAACTGTTGAGAATTCAATGTCCGAGATTGAAACAAACAAAAGTGGTG
TCGAAGCGCTACTTAACCGGCTTAATCCACAGAAAGCAACAGGACCGGAT
AGCATATCATCAAGATTCCTAAAGGAATTTTCAGCTGAGATTTCTTCACC
CCTCACAATGATATTCAAACTGTCCCTCAAATCAGGTACCCTTCCCAAAG
ACTGGTCGCATGCATTTATTGTACCTGTGTACAAAGGGGGTAACAAAGAT
AAGAACCAGGCTGAAAATTATCAACCAGTTTCACTCACATCGATTTGATG
CAAGTGCTTGGAACATATTATTTATAGCAATGTAATGACACACCTTAATG
ACAATAATGTATTGAGTGACTACCAACATGGTTTCAGAGAAAAACGTTCA
TGTATGAGTCAACTTTTAACCACCGTGAACGACTTTGCTAGGAACCTTAA
TTATAAGAAACAAACAGACTCTATCTTACTGGACTTTAGCAAGGCATTTG
ACAAAGTTAACCACTTCAAACTTTGTCTAAAGGCATCACACTATGGTATT
CGAGGCACCACACTTAAATGGATAAAACCATTCCTATCAAACAGAATGCA
ACAAGTTTTATTAAACGGGAAATCCTCAGATACGGCTAACGTTTTGTCTG
GTGTACCCCAAGGCACCGTACTTGGACCACTACTATTCTTGATTTACATC
AACGACATGCCATCATACGTTAAATCTAACATTCGCCTATTTGCAGATGA
CGCTTACTTGTATCGCATAATTGATAGTATTGGTGACCAAATCACACTTC
AAGATGACCTCACAGCACTTCAGCAATGGGAGACACTATGGGATATGGAA
TTTCACCCTCAAAAGTGCAAACATCTCCCAATTACAAATAAAACCAAACC
CATAGAAAGCACATGTTCTATCCATCAAACAGAGCTTGAGAAAGTATCTA
ACGCCAAATACCTTGGAGTAACCCTGAACAATAAGCTCAAGTGGAACACT
CATATTGACACAATATGCAAAAAGGCAAATCAAAAGAGATCTTTTCTTCA
AAGGAACCTGAGGAATTGTTCACGTAAAATCAAAGCGAAAGCATTCAATA
CATATGTTAGACCTATCCTGTCCTATGCATCTCCAGTGTGGAACCCAGTA
TCGAGCCAAACCTTATGTGATAATCTTGAAATAGTCCAACGTAAAGGAGC
CCACTTTGTTTTCTCGAATTGGTCGTGGGATGCTAGTCCTACTAGAATGT
TGAATGATCTAAAATGGAAAACTTTGGAACACCAAAGAAAAGTTGATTCT
GTTGCTGTATTTCATAACATAAAATCAGGAAAGTTGGAAATGCAGAGCAT
TCTCCCAAAACAAGTTTGTGATAGTGTTAAATACCAGCCAATACACCGCA
GAGTAATAGCATACAGAGATTCTTTTCTGCCCATAACTGTTAAATGGTGG
AATGAGTTGCCAAAAGAAGTATTGAATATTGAAAATGAATTTAAAATCGA
AATTTCGTCTTATTTTGACAGAAACTAGATCATATGGTATTTTTTTTTCC
TTGTATCAAACTCTTGTGTTTTCTTAATCACTAACACCAGGTTGCCTTGG
CCCTAGTTCAAGCTCGTTTAACACTAATTCCCAGGTCAGTATCAATTTAC
GTTCTTGAAGCCTTTTCTAATTAACTCTAGTAATAATAATTAACGGAGTA
ATTTCTAGTATAATTTCTAGCATTTCTAACTTTTAGTGATTTATTTTTAT
TTATTTAATTTATCTTACCTTTTTATTTTGCATGAAGCTAATGAAACTTC
CTATTTTGTTGCAAGTTTAGGTTAGCCTCCACCCATGTTTTTATTCTCAC
TAATTTTTTAAATTTTTTGCCTATGTTCACCTTACTCTTTCTTACATCAC
TCATTTTGAAGCCTTTCTCTCTGAAAGAGTCTGCTAAATTGCGTAGGTTG
CGTGGGTCGTGGGTCAATATTTTTGCGTGGGTTAATATTTTTGTGTGGGT
CATTTTTTGCGTGGGTGCGTGGGTCAAAATATTTTTTGCGTGGGTCAATT
TTTTTGCGTGGGTCAAATCTTTTGCGTGGGTCATTTTTTTGCATGGGTCA
TTATTTTCTTGCGTGGGTCAATTTTTTTTGCGTGGGTAAAAAATTTTGCG
TGGGTCATATTTTTTGCGTGGGTCATATTTTTTGGGTGGGTCATAATTTT
TTGCGTGAGTCATTATTTTTCGCGTGGGTCATATTTTTTGCGTGGGTCAT
TATTTTTTGCGTGGGTCAAAGTTTTTGAGTGGGTCACTATTTTTTTGGTG
ATTTTTTAGCTAACTCGATTTTTTTACCATATTAAAACTTTCGAGTTAGC
TAAGACGTTTTTTTTATCAAATTAAAATTTTTCAAGTTATCTTATACAAA
AATGTGTTGTGTATATATCTACGAAAACTAAACAAAAGCACACAGTTTTT
ATGTAGTAACACCTTGTGGTTTATTTTACATAGCTTCACTTATTTACTAT
AACATTATACAGAATCAACACACATCCGTCTAATTTTTGTAGACACACTT
CAGGATCACACTTTTAAATTTTAGCATGCTATATTTCAGGATTCCAGTGT
CATGGAAATAAACAATGTAACTTTAATTTTTTCCTCCCTTTTCTATTGCT
TTGAAAAAAAGTACAGCGTCTTTATTTCGTCCAATTTTTAATGTACTTTA
ATCAAAGAAATTACAAGTGGGGTGGACGAAATAATTGACAACGATTAAAT
TGTTTAGTAATCCGTCGCCTAATGAATATAACTTTTGTAGAAAAATTTTC
AGATTTTGTCACCATTTGCTTTGTTCTTTAACACTCAAAGCAAACCCAAA
AGATTAATGCGTGCTATAAGAAGCTTTAAAGCTTCTAAAAAGATTCTATA
AAGCTTCCTCTTATAAAAAGACAGCTACAGCTATGCAAAATAAACAAAAT
AAACCAAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNTTCGAATTACAGAGAGAATTTTGACCC
ACGCAAAAATTTTGACCCACGCAAAAAATAATGACCCACGCAAAAAATAA
TGACCCACGCAAAAAATATGACCCCCGCAAAAAATATGACCCACGCAAAA
AATATGACCCGGGTGGTTGGGATTAGACGAGGGATGTCGATATTAGACCA
AGTTACGGTACTAGACCACGAAGCCACCTGAAGCCACGGCACAGTTGTGA
ATACACCTTTCCCGTAATTCAAAGTTCTCAGAAATTGCCCGGGAAAATGT
GCGCTCCACTGTTGTGTATAAAATTGTTTGATAGGTAAAAGACGCGTTTT
TGCCTGCAAGGGGTTAGGGAAAGTGGGATTTGAGCCTCTAACTTTTGACA
GCGATCTTCTTTTGGAAAAATATTTTCAGGCTGGTATAATATCATGAATA
GATTGAACATATTAAAATTTGAGGGGGTTTTGTTCGACAGAACTTAAGAA
AAACTCAAAAAACCAACTTTCCCTAAGGGAACGCAGGCAAAAACGGGTTT
GTTTACCTCCAGAGACCAAACGGTGGAGAGCATCAAAATAATGCGTGCGC
ATTAGTTTTACAAATTACGGGAAAGGTGTTTTCACAATCTACAGAAGCAG
CCACCGTGGCAAAAAGGCATTGCTATTTTGAAAATATCTAGCTGTTCTCG
ATTTGCCAGCCAGGAAAATATTAAAGTCTGTCCAGATATAATTTGCAGTG
GAAACAAGAATGCCTGTAACTTTTGATAGTCAAATATAATTATNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNAATAAGAAAATATAGCTTTTCTCAATGTTGACTCATAATTT
TTTTCTTATTTTTTGCACAATGATGCAAAATGACAATGCCCAAAATGTGA
CGGAGCCAGATTTTTAAGGAAAATTTTTTTGGGCAAATCTGGGCCAAAAA
CAGCTTAAAAGGTTTTTTGGGTCTGAATGGTTTAAGTGATTCTCGTATTT
GGGGACATTCCTTTTTACCATTTTACATTATTCAACACACAAGCTTTATT
TTTCCATTCTGAATTTTTGTACAATTATTGTCACTTTTTTCTTATTTTCA
TCTGATGTTAATCATTAGGTAGGTCCATTCAGCATGTTGCTTGTTTCTAC
TTATGCTATAACGTTCATTTTTACACCATCGGTAGTTCAACCTTAGGTTA
AGAAGTTTGTTAAATTTCAAGGCAAACAGAAAAGTCCTTCGGAAGATATA
GGACCCGAAATACCCCTTGGTAGCACTTTTCTGTGAAGTATCAAATCTCC
AACTTATTACTTATTACCCAAAAACTTGTGTGGTCTCTCCTACTGATTGC
TTCCTGGTGCTTCCTTCGCAGCTGTTTGTTAAATTTCCACCAATGAAATT
GCTGCAATTCACACGACTCTTCTTTTTGGCACCTGTGACCTCTCAATGCC
TTGTCTAGCATGACAGGCGGCTGTCAAATCCCAACCTTCATATATTTGTT
TCAATTCGTGATACTAAGGCTTAGGTTTTTCTCATCTTCAATTTACTGAA
GAAAGCAGAAGAAAGCAGGAATTTGATGCGAGAGTTAGATTGTCATCAAA
GTGTCGTAAAAAATCATTGAATAAAAGAAGAACTTTAAATCTTAAATATT
TTCATTTTGAAAAATTGGTGCAAAAAAATGAAACATGGAAAAGTTTTTGG
TTCAATCGAAATAGGGGATCTGGAAAACTTTCTATGTATGGTTTTTTGCA
CAAACCCCTAACTATGGGCAAGCACCTCTTTAATAAGATTTTGGCTCAAA
ATCGAAAGTGAAACCACTGAAAATGAAATTAAAATCTGCCCGCACTCCAA
ATCCCGTAACCTTGATATAGGAGTTTAGTATAGACTGTTAGTGATAGCAC
TAGGCTTTTTTATAATTCAAAATTAATTTATTTTGTTCTTCTTTTTTGAA
GCCGTTGACATTGCAGTGTTACTTTATATGACATCAGAATTTTTTATGAC
GTATTGTTTTGAGAAGTCCCCACTCGCATCAGCCAACAGTAGGGTATTCT
CTAGTGTCTGTCAGTAACGTAAATAAAGCCTGGAATACACTGGGCCAAGG
TTGCTGTCAATAATTTTCTTAAGCAAAGAGTACACAAATTAATTCTAGCT
TTACGATAGTGCCGCGGATCATCAGTGGATAGTATTCAATTATCATTGTC
CCTTATTTTCATTTCTGGAACTTTTGCAAAAAAGGGAAAATAGAAAAGTT
GTATTTTTACTGCTCTATTCACATACTGAATTTGAAAGATCTTCTATGTT
GTGTTTTTTTTTGCAAATTTAAAAAAACTGATTTTTGTCCTGACTTTAGC
TTAAGAGCTTGCGTGCAGCATTGGGTACAAAGTCCAAATCTGCGTTTCCT
TTAAATTTAATATGAAGGGTTAGGCCGGGATACTTACGACTAACTATATA
TCTGGTTTTCTAAATGTTTATAAATAGAATAAGAGCCCCTCTATTCAGTA
ATTTATTAAAACTACTCTAAATAGACCCGAGTATATATCCAGGGAACTCT
GAAATTCAAAAGGGTTGATTTTAGCTTCATTAAAAAAAGGTTGTAAGGTT
TTAGGGTGTAAATTAGAATGTTCTCTCTTATCAGATGATACATATTTGAA
AAAATGTGTTCGTGAAAATCGAATTTTTTAGCTGTGAGGGCGTAGAATCT
AAATAGAATTGGCATAATAGTGTGAATTTTGGGTCAGCTTGGCTCAGCTT
GGCTCAGCTCAGCTCAGCTTATAATAAATGCATTTTATACTGCACATTTT
TTGCTCGTAAGTCAAGCAAATGATAAAGCACTTTTATATTATTCTTTATA
GAATTGCATTTGGCAGAGTCCAAGCATGATTAGCTGATCAAAACCACCTT
ATTGTTTTAGTAGAGGGCCATTTAGTTTAGTTTGTTTATTTGCAAATATA
GTTTTTTTGATTTTTTCTTAACTCAGAGTATAGATTGAACATAATAGAAA
TATGAGTGGAACGCCCCCAATAAACATTCAAAAGGAGACAACAACTCCTG
AAAAAAGAAAAAGTGGAGGGGAGTTTGCTGTACCAAGCACCCCACCAAAA
CATACCTCGCCACGTCATCATCCATATTTTCAACATCATGGATTGACAGT
ACCATCTCCTATACCATGTAGAAGAACTCGAACCACATCTGTGTAAGTAT
AAAGAGTATAAACAATTCAAAAGTGGGTGCTGTTGCACACTTATTAGCAG
AAATTAAATGATTTAAATTGTTGATACAGTGTCGACTCTGTAAGTCTAAT
TCGATATTCAAAAGACCAATTATTATATTTAAATTGGAGAGGGCTGGTTG
TATATAGATATTAGACTTGTATCTACATTTTTTCTTGCCATGAGTACATA
AGTCATTTTAGAGTCACAAAGCGTAATGGGTGATCAAGGCCACTGCGCGT
TAATGACGACTTACTATTGGTCAAACGTTTTTGAAAATTTTTGTGTCTAG
CCAACAGAGGCGCAATCAGTCTTGATTACCCATGATCCATTTTGACTTCG
AAATGGCCTATAGGAGAGATGTAGAATTCATTCATTTGGAAATTTCTTTT
TCTGTCGTTTATTAGGTCGAGATTAGCAGCAGACAGTCCATTACAGCAAG
GAATTGTGGTCAGCTTTTGTCGTGAAAAGGGACATGGATTTGTCAAGCCA
GATGATGAAGAGAAGGCAATTTTTCTACACATTTCTGAGTAAGCCTTTTA
TCTTATACGTTTTAAGTATGTAAGTCTTTACCTTTTTTTCCTTTTTTCCT
TGTATTCTCTCTAAGAAAATGTTATTGTTTTTTAACTTTCGATGTCTAGA
TCCCGAGATATTTTAGTTTAAATATTGAAAAATTATCGATATTTTCTGCT
GAGTCAGCAGTTTTCAGCATATTTACCCACTCAAACTGAATTATTTCGAG
ATCTAAACACTAAAGCATAACAAACCATACCATTTTTGGATACTAAAAAC
TCAGGGCTTTGCAGCCGTGGGGATTATGTTTTTCTGAAAAATGCTCTAGG
AAAATGCTGACGTCATCACAAAACGCCCAAAATGTCAATTTTTCGCCTTA
AAAATGCCATTTCTCGGCACCAGATGGTCGAAACTGAACAAATAACCCCA
TTTTCTTTATCTAATTTTCACGCAGAATCCGTTAGTAGCATCAGATATTT
GATTTTGAGACCTCAAAAAACCGTTGGTAAAGGGACCCTTGATAAGTTCT
ATCCATTAACTAAAAATCGATTCACTCGAAAACTGCAGGAGATTTGAAGG
GGGAATTTTTTTTATCAATTTTAGATATTATACTCCTATTAGGAACATAA
CATCAAAAATTTGCCCTGATCTAAAGGGTGTCCTACGAAGTGACACAATT
CACTACCTCGGCCGCTGGTCTACTTGCCAAGTGAATCATAGCACCGAGTG
AGAATCGAACCCTGACCTATCAGACAGGAATCAAGGTTGATAACCACTAC
ACTACCACGCCTACAGTTTTATTCTGTACATTATCTATAATTATCTTACA
CTTGTTTCTATCGCTGTTTTTAATCAATGTCAATTATGTTGAATAATAAT
TACATAATAATATATCTCAAATAATTCCTGATCAGAGAGTTAGTTTTAAT
GAAGAAAAAAAAACAGAACTAATTCATAACCAGCGTATTCAAAATGACTT
GTAATGAACTGTCTAATGACTTTTTTCACAACATAGTATCGAAGACGATT
ATGTCGTCCGAAAAGGAGACCGGGTCGAGTTTAGAACCATCCCCATGCCA
CCAAAAAAAGTTGAGCGCATGGCTGTCGAAGTTCATTTAATTTCATTGGA
TGAAAGTGCGCCACACGAAAGATGGGACAACCAACCTGATGTGTAGATAA
ACCGAATTTTCCGTAAATCTTATTAATAATAAGACTAATTTTTGTGATTC
CGATAAAAGTCGGATTATCTCATGATTATTTCCGGTTATCGGATATAGTT
CGTTAGGGATTTAAGGCCCTTAATTGTATGATAGGTATTAACAGTAACAT
TGTGAGAAACACCATGCATTTTATGATTTTAATATTATATTAATAGGGCT
TTGAGTCAAAATTGCTAAATTTTCTGTTCTATCTTCTTGGGTTTCACAAA
TGAACTTTAATAAAGATGACTAGTTGGGTATAAGATATCAGAAAGTTTTC
AACTCTTTATTAGGCTATTTCAG Coding sequence (CDS) from alignment at scaffold_354:140735..158607- >TCONS_00061152 ID=TCONS_00061152|Name=TCONS_00061152|organism=Clytia hemisphaerica|type=CDS|length=1422bp|location=Sequence derived from alignment at scaffold_354:140735..158607- (Clytia hemisphaerica) TATCGAAGACGATTATGTCGTCCGAAAAGGAGACCGGGTCGAGTTTAGAA CCATCCCCATGCCACCAAAAAAAGTTGAGCGCATGGCTGTCGAAGTTCAT TTAATTTCATTGGATGAAAGTGCGCCACACGAAAGATGGGACAACCAACC TGATGTGTAGGTCGAGATTAGCAGCAGACAGTCCATTACAGCAAGGAATT GTGGTCAGCTTTTGTCGTGAAAAGGGACATGGATTTGTCAAGCCAGATGA TGAAGAGAAGGCAATTTTTCTACACATTTCTGAATGAGTGGAACGCCCCC AATAAACATTCAAAAGGAGACAACAACTCCTGAAAAAAGAAAAAGTGGAG GGGAGTTTGCTGTACCAAGCACCCCACCAAAACATACCTCGCCACGTCAT CATCCATATTTTCAACATCATGGATTGACAGTACCATCTCCTATACCATG TAGAAGAACTCGAACCACATCTGTTATCGAAGACGATTATGTCGTCCGAA AAGGAGACCGGGTCGAGTTTAGAACCATCCCCATGCCACCAAAAAAAGTT GAGCGCATGGCTGTCGAAGTTCATTTAATTTCATTGGATGAAAGTGCGCC ACACGAAAGATGGGACAACCAACCTGATGTGTAGGTCGAGATTAGCAGCA GACAGTCCATTACAGCAAGGAATTGTGGTCAGCTTTTGTCGTGAAAAGGG ACATGGATTTGTCAAGCCAGATGATGAAGAGAAGGCAATTTTTCTACACA TTTCTGAATGAGTGGAACGCCCCCAATAAACATTCAAAAGGAGACAACAA CTCCTGAAAAAAGAAAAAGTGGAGGGGAGTTTGCTGTACCAAGCACCCCA CCAAAACATACCTCGCCACGTCATCATCCATATTTTCAACATCATGGATT GACAGTACCATCTCCTATACCATGTAGAAGAACTCGAACCACATCTGTTA TCGAAGACGATTATGTCGTCCGAAAAGGAGACCGGGTCGAGTTTAGAACC ATCCCCATGCCACCAAAAAAAGTTGAGCGCATGGCTGTCGAAGTTCATTT AATTTCATTGGATGAAAGTGCGCCACACGAAAGATGGGACAACCAACCTG ATGTGTAGGTCGAGATTAGCAGCAGACAGTCCATTACAGCAAGGAATTGT GGTCAGCTTTTGTCGTGAAAAGGGACATGGATTTGTCAAGCCAGATGATG AAGAGAAGGCAATTTTTCTACACATTTCTGAATGAGTGGAACGCCCCCAA TAAACATTCAAAAGGAGACAACAACTCCTGAAAAAAGAAAAAGTGGAGGG GAGTTTGCTGTACCAAGCACCCCACCAAAACATACCTCGCCACGTCATCA TCCATATTTTCAACATCATGGATTGACAGTACCATCTCCTATACCATGTA GAAGAACTCGAACCACATCTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00061152-exon-scaffold_354-1575043694:158534..158607 | TCONS_00061152-exon-scaffold_354-1575043694:158534..158607 | Clytia hemisphaerica | exon |
TCONS_00061152-exon-scaffold_354-1575043694:142766..142981 | TCONS_00061152-exon-scaffold_354-1575043694:142766..142981 | Clytia hemisphaerica | exon |
TCONS_00061152-exon-scaffold_354-1575043694:142220..142342 | TCONS_00061152-exon-scaffold_354-1575043694:142220..142342 | Clytia hemisphaerica | exon |
TCONS_00061152-exon-scaffold_354-1575043694:140735..141221 | TCONS_00061152-exon-scaffold_354-1575043694:140735..141221 | Clytia hemisphaerica | exon |
TCONS_00061152-exon-scaffold_354-1510915933:158534..158607 | TCONS_00061152-exon-scaffold_354-1510915933:158534..158607 | Clytia hemisphaerica | exon |
TCONS_00061152-exon-scaffold_354-1510915933:142766..142981 | TCONS_00061152-exon-scaffold_354-1510915933:142766..142981 | Clytia hemisphaerica | exon |
TCONS_00061152-exon-scaffold_354-1510915933:142220..142342 | TCONS_00061152-exon-scaffold_354-1510915933:142220..142342 | Clytia hemisphaerica | exon |
TCONS_00061152-exon-scaffold_354-1510915933:140735..141221 | TCONS_00061152-exon-scaffold_354-1510915933:140735..141221 | Clytia hemisphaerica | exon |
TCONS_00061152-exon-scaffold_354-1491911889:158534..158607 | TCONS_00061152-exon-scaffold_354-1491911889:158534..158607 | Clytia hemisphaerica | exon |
TCONS_00061152-exon-scaffold_354-1491911889:142766..142981 | TCONS_00061152-exon-scaffold_354-1491911889:142766..142981 | Clytia hemisphaerica | exon |
TCONS_00061152-exon-scaffold_354-1491911889:142220..142342 | TCONS_00061152-exon-scaffold_354-1491911889:142220..142342 | Clytia hemisphaerica | exon |
TCONS_00061152-exon-scaffold_354-1491911889:140735..141221 | TCONS_00061152-exon-scaffold_354-1491911889:140735..141221 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_354 | supercontig | scaffold_354:140735..158607 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
Term | Definition |
GO:0003676 | nucleic acid binding |
GO:0003677 | DNA binding |
Vocabulary: Biological Process
Term | Definition |
GO:0006355 | regulation of transcription, DNA-templated |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0006355 |
regulation of transcription, DNA-templated |
molecular_function |
GO:0003677 |
DNA binding |
molecular_function |
GO:0003676 |
nucleic acid binding |
Blast
BLAST of TCONS_00061152 vs. Swiss-Prot (Human)
Match: CHSP1 (Calcium-regulated heat-stable protein 1 OS=Homo sapiens GN=CARHSP1 PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 4.688e-26 Identity = 49/107 (45.79%), Postives = 64/107 (59.81%), Query Frame = 1
Query: 238 GLTVPSPIPCRRTRTTSVSRLAADSPLQQGIVVSFCREKGHGFVKPDDEEKAIFLHISDIEDDYVVRKGDRVEFRTIPMPPKKVERMAVEVHLISLDESAPHERWDN 558
G VPSP+P RRTRT S + A+ P+ +G+ FCR KGHGF+ P D IFLHISD+E +YV +GD V ++ +PPK + AVEV + L HE W
Sbjct: 36 GNVVPSPLPTRRTRTFSATVRASQGPVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGEYVPVEGDEVTYKMCSIPPKNEKLQAVEVVITHLAPGTKHETWSG 142
The following BLAST results are available for this feature:
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