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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061034 ID=TCONS_00061034|Name=TCONS_00061034|organism=Clytia hemisphaerica|type=transcript|length=944bp AGCTCGatagggacccctcaaagtattttttagacttggctgaaggtgta caGCACCAAATTTCCTAATTTTCCCCTTATATCGACGATCGACTCTTACT CGCTTTTTTAAAAACTGCTTATTCAGCAAAATCAGCGAGCCAAAAGGTGG GCCATATAGTAGGCCAAATGGCCCGGGCCAACTAGGCGAGCCAGCTTTTG TTTAAACCCCTTTAGTTTGGATGGTaagaaacttttcatttcagTGCTTC CATCAAAAACACGTTCATCGTTATCATCATTAACTGGACCTAAATCTGGC AATTCTTCGCTTTCACTGACATCTTCATCTTCCtcgtcactttcattttc tttgtcaTTCACAATATCACTCTTCTCATTCATTTGTACATGCAAGTCTG GTAAATCAATAAATCCGTTTTCAGGGAGTTTTTGTAGTCTTTCCATGTTT ATGTTGATTTCACTATATAAAAAGTTATTGGGTTCACCTTTGTCATTTTT TCCGGTTAACCATAACAATGCCTGTAATATTTTTTCACGTCGAACAACAA GTTCTTTTGAGGTATTATTTTTCCcattaattttaaaaatcatgacaGGA ATGTCACTGGGTTCTCTTGGAAGGACATCTGCAATTTTTTGTACATTGTG AGGCAAATTCAAAACGTGACCTTTGTAAGCTCTCTGACCTCCTCTTGGTC GGGTGTACACTTGCATTACAGGAAAAGCTCTAGCTATTAGCATTTCTTCA ACTTGCGTGAGACCTTTCAATGCTTCTGGTACAGGACTTGGTTTCATATT ATTATCAGCACTAAATTTTTTTGGAGTTCCTTTGTCTCTTTTGCAACGCG TACAAATGTAATCATTGACTGAGTTTacttttgacgtaatttttatTGGC CAGGATTCAAAACAGGTTTGACATTGAGCAATTGAAAACTTCAT Run BLAST on NCBI protein sequence of TCONS_00061034-protein >TCONS_00061034-protein ID=TCONS_00061034-protein|Name=TCONS_00061034-protein|organism=Clytia hemisphaerica|type=polypeptide|length=270bp
MKFSIAQCQTCFESWPIKITSKVNSVNDYICTRCKRDKGTPKKFSADNNM KPSPVPEALKGLTQVEEMLIARAFPVMQVYTRPRGGQRAYKGHVLNLPHN VQKIADVLPREPSDIPVMIFKINGKNNTSKELVVRREKILQALLWLTGKN DKGEPNNFLYSEININMERLQKLPENGFIDLPDLHVQMNEKSDIVNDKEN ESDEEDEDVSESEELPDLGPVNDDNDERVFDGSTEMKSFLPSKLKGFKQK LARLVGPGHLAYYMAHLLAR Run BLAST on NCBI transcript from alignment at scaffold_353:11503..12446 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061034 ID=TCONS_00061034|Name=TCONS_00061034|organism=Clytia hemisphaerica|type=transcript|length=944bp|location=Sequence derived from alignment at scaffold_353:11503..12446 (Clytia hemisphaerica) ATGAAGTTTTCAATTGCTCAATGTCAAACCTGTTTTGAATCCTGGCCAat
aaaaattacgtcaaaagtAAACTCAGTCAATGATTACATTTGTACGCGTT
GCAAAAGAGACAAAGGAACTCCAAAAAAATTTAGTGCTGATAATAATATG
AAACCAAGTCCTGTACCAGAAGCATTGAAAGGTCTCACGCAAGTTGAAGA
AATGCTAATAGCTAGAGCTTTTCCTGTAATGCAAGTGTACACCCGACCAA
GAGGAGGTCAGAGAGCTTACAAAGGTCACGTTTTGAATTTGCCTCACAAT
GTACAAAAAATTGCAGATGTCCTTCCAAGAGAACCCAGTGACATTCCtgt
catgatttttaaaattaatgGGAAAAATAATACCTCAAAAGAACTTGTTG
TTCGACGTGAAAAAATATTACAGGCATTGTTATGGTTAACCGGAAAAAAT
GACAAAGGTGAACCCAATAACTTTTTATATAGTGAAATCAACATAAACAT
GGAAAGACTACAAAAACTCCCTGAAAACGGATTTATTGATTTACCAGACT
TGCATGTACAAATGAATGAGAAGAGTGATATTGTGAAtgacaaagaaaat
gaaagtgacgaGGAAGATGAAGATGTCAGTGAAAGCGAAGAATTGCCAGA
TTTAGGTCCAGTTAATGATGATAACGATGAACGTGTTTTTGATGGAAGCA
ctgaaatgaaaagtttcttACCATCCAAACTAAAGGGGTTTAAACAAAAG
CTGGCTCGCCTAGTTGGCCCGGGCCATTTGGCCTACTATATGGCCCACCT
TTTGGCTCGCTGATTTTGCTGAATAAGCAGTTTTTAAAAAAGCGAGTAAG
AGTCGATCGTCGATATAAGGGGAAAATTAGGAAATTTGGTGCtgtacacc
ttcagccaagtctaaaaaatactttgaggggtccctatCGAGCT Coding sequence (CDS) from alignment at scaffold_353:11503..12446 >TCONS_00061034 ID=TCONS_00061034|Name=TCONS_00061034|organism=Clytia hemisphaerica|type=CDS|length=813bp|location=Sequence derived from alignment at scaffold_353:11503..12446 (Clytia hemisphaerica) ATGAAGTTTTCAATTGCTCAATGTCAAACCTGTTTTGAATCCTGGCCAat aaaaattacgtcaaaagtAAACTCAGTCAATGATTACATTTGTACGCGTT GCAAAAGAGACAAAGGAACTCCAAAAAAATTTAGTGCTGATAATAATATG AAACCAAGTCCTGTACCAGAAGCATTGAAAGGTCTCACGCAAGTTGAAGA AATGCTAATAGCTAGAGCTTTTCCTGTAATGCAAGTGTACACCCGACCAA GAGGAGGTCAGAGAGCTTACAAAGGTCACGTTTTGAATTTGCCTCACAAT GTACAAAAAATTGCAGATGTCCTTCCAAGAGAACCCAGTGACATTCCtgt catgatttttaaaattaatgGGAAAAATAATACCTCAAAAGAACTTGTTG TTCGACGTGAAAAAATATTACAGGCATTGTTATGGTTAACCGGAAAAAAT GACAAAGGTGAACCCAATAACTTTTTATATAGTGAAATCAACATAAACAT GGAAAGACTACAAAAACTCCCTGAAAACGGATTTATTGATTTACCAGACT TGCATGTACAAATGAATGAGAAGAGTGATATTGTGAAtgacaaagaaaat gaaagtgacgaGGAAGATGAAGATGTCAGTGAAAGCGAAGAATTGCCAGA TTTAGGTCCAGTTAATGATGATAACGATGAACGTGTTTTTGATGGAAGCA ctgaaatgaaaagtttcttACCATCCAAACTAAAGGGGTTTAAACAAAAG CTGGCTCGCCTAGTTGGCCCGGGCCATTTGGCCTACTATATGGCCCACCT TTTGGCTCGCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00061034-exon-scaffold_353-1491911889:11503..12446 | TCONS_00061034-exon-scaffold_353-1491911889:11503..12446 | Clytia hemisphaerica | exon |
TCONS_00061034-exon-scaffold_353-1510915933:11503..12446 | TCONS_00061034-exon-scaffold_353-1510915933:11503..12446 | Clytia hemisphaerica | exon |
TCONS_00061034-exon-scaffold_353-1575043694:11503..12446 | TCONS_00061034-exon-scaffold_353-1575043694:11503..12446 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_353 | supercontig | scaffold_353:11503..12446 . |
Blast
The following BLAST results are available for this feature:
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