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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061027 ID=TCONS_00061027|Name=TCONS_00061027|organism=Clytia hemisphaerica|type=transcript|length=602bp
GCAGGCGATAacttatttcaagaaaacaatcAACAGCGCAAGAATATCTT
GAGGGTGCTACTCAAACTGGGTTTGACAGTGTTTATCCCAGTCCTGAGTT
TCCTCTCAGAACTGTGGCAGTTTGAACGTCCGGGACAAACTGTTTgggtc
gaaaaatgaatcaatctgaatgtctaagacaggagacagattgtaatttg
actgtcagcaaattcactgattggtaGGTCTTTATATATTTTCTAATTGT
ACCCCAAAGTCAAAAGTAATGCGTCTTGACTGCGAGAGAGAGGACTTCTT
TACTGACCTTCCAGAAACTTCCCCACGGAACTACTATACACCTTTCCTGC
ATGTTACCCAATCGGACAAATTGGAAGAAATCAAGATATCAAAACCCGGG
CTAAAAAGCAGTGTAAGATGCCCGCGGCACTTGACGTGAAAAATAAAAGC
CGTCCTGGAAAAAAACGAACAATACCGAACATTCACGGAAAAGACTAACT
ACGGATAGGCTTgcgcgacaacaacaacaaaacaaaaatccgagattcca
gtccaacaATCCTTGCGcctgaagctatgagtgcctcctcactcgctgac
gc Run BLAST on NCBI transcript from alignment at scaffold_353:9804..10706- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061027 ID=TCONS_00061027|Name=TCONS_00061027|organism=Clytia hemisphaerica|type=transcript|length=903bp|location=Sequence derived from alignment at scaffold_353:9804..10706- (Clytia hemisphaerica)
GCAGGCGATAACTTATTTCAAGAAAACAATCAACAGCGCAAGAATATGTA
CGACCCCTAGTCGTTCTACATGAATTTTGAAAATGCGCAACACTCAATGC
TGTATCTAAATCAATTAATAAATCTTCCTGTTCCATGACCGTAAAAAGTT
TTCAATTCAAATCGATTTTCAAGTGCTACTTCAAATTCTACTTCAAATTT
TTATGGAACGCAATTAAGCCCCTTTCAGCCTATTTACCAAGTCTTTTTCC
CTTTTTATTGCTATCAGTAGTGGTATCAGACCTTGTTTCAAACAAATTAT
GAATTAAGTTACTGTAATTCCTTTACTCTTTGATTTACTTTCAATCAGCT
TGAGGGTGCTACTCAAACTGGGTTTGACAGTGTTTATCCCAGTCCTGAGT
TTCCTCTCAGAACTGTGGCAGTTTGAACGTCCGGGACAAACTGTTTGGGT
CGAAAAATGAATCAATCTGAATGTCTAAGACAGGAGACAGATTGTAATTT
GACTGTCAGCAAATTCACTGATTGGTAGGTCTTTATATATTTTCTAATTG
TACCCCAAAGTCAAAAGTAATGCGTCTTGACTGCGAGAGAGAGGACTTCT
TTACTGACCTTCCAGAAACTTCCCCACGGAACTACTATACACCTTTCCTG
CATGTTACCCAATCGGACAAATTGGAAGAAATCAAGATATCAAAACCCGG
GCTAAAAAGCAGTGTAAGATGCCCGCGGCACTTGACGTGAAAAATAAAAG
CCGTCCTGGAAAAAAACGAACAATACCGAACATTCACGGAAAAGACTAAC
TACGGATAGGCTTGCGCGACAACAACAACAAAACAAAAATCCGAGATTCC
AGTCCAACAATCCTTGCGCCTGAAGCTATGAGTGCCTCCTCACTCGCTGA
CGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061027-exon-scaffold_353-1575043694:10660..10706 | TCONS_00061027-exon-scaffold_353-1575043694:10660..10706 | Clytia hemisphaerica | exon |
| TCONS_00061027-exon-scaffold_353-1575043694:9804..10358 | TCONS_00061027-exon-scaffold_353-1575043694:9804..10358 | Clytia hemisphaerica | exon |
| TCONS_00061027-exon-scaffold_353-1510915933:10660..10706 | TCONS_00061027-exon-scaffold_353-1510915933:10660..10706 | Clytia hemisphaerica | exon |
| TCONS_00061027-exon-scaffold_353-1510915933:9804..10358 | TCONS_00061027-exon-scaffold_353-1510915933:9804..10358 | Clytia hemisphaerica | exon |
| TCONS_00061027-exon-scaffold_353-1491911889:10660..10706 | TCONS_00061027-exon-scaffold_353-1491911889:10660..10706 | Clytia hemisphaerica | exon |
| TCONS_00061027-exon-scaffold_353-1491911889:9804..10358 | TCONS_00061027-exon-scaffold_353-1491911889:9804..10358 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_353 | supercontig | scaffold_353:9804..10706 - |
Blast
The following BLAST results are available for this feature:
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