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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061003 ID=TCONS_00061003|Name=TCONS_00061003|organism=Clytia hemisphaerica|type=transcript|length=4556bp CATATCGTGCGCTCGCTTTGCTCTCACGAGAAGAAATCACCGGGCAGGGA AAAATCGGCTCCGGAAAGTAAACATTGCTAAGATGACGAAACCATTTACC TGCctgatttaaaattttggctTGGGTCGATGATCACTATTTGGGCGCCT TCTGGAGTGCCcggctcaaaaagtctagcCGGATTTGTATATGATTTGAC GAATCGagtggaaaataaaaattttggtgCAAACAAGTTTCAAAATCACA ATCTCCAGTCACCTTTGAGGGAAAGATACAAGTTGAAAGATGACCTAAAT CAAAatgTCAACAAAAGAAGTAGAAGAAGTGCAGATGATCACCATCAAAA CCTTAAAAGccacaaaaatgttttgtttgctGAGCAACAAAAGATTTTGA GCCGGAAAAGAAGAGGATATGTTGAAGATCCCGATTATCGACTTCAATGG TATTTAAAAAATACTGgTCAAACCAAGAGTAGATGTTCACAATATCATGG TTACGAATCATTGGATATTAATGTTGCACCTGTTTGGGAGAAAAACATCA CCGGTCAAGGTGTTGTAGTATGTATCCTTGACGATGGTCTGGAGTATACT CACCCTGATCTGAAACGGAACTATGAGGCACGTGCAAGTCATGATTATAA CGGGAATGATAATGACCCAATGCCAAGATACACATCAGATCGAATCAATA AACATGGCACTAGATGTGCAGGAGAGGTGGCTGGTGAACGAGGCAATGGT GTTTGTGGGCGTGGTGTGGCGTACAATAGTCGTGTGGGCGGCATAAGAAT GCTGGATGGCGAAGTAACTGATGCTGTAGAAGCAGGCTCGTTGTCTTTTG CGTCAGATTTCATTGATATTTACAGCAGCTCGTGGGGACCCGACGACGAC GGTAAAACTGTCGACGGTCCAGGACCGTTAGCTAAGAAAGCCTTCAGAAA TGgTATCAAGAAAGGGCGTAAAGGGCGTGGCTCTATCTTCGTATGGGCGA CCGGTAATGGTGGCCGATACAGTGATTACTGTTCATGTGATGGTTACATC AATTCACCTTTCACCATTTCCATTGGAGCTGTAGATAATTGTGGTCGCAA ACCTTGGTATTCTGAAGCATGCCCGGGCACATTTGCGGTGACGTACAGTA GCGGAGAACCAACGGGGAATCGAGATAAACAGATCTCAACCACTGACTTG AGTGGCAAATGCACGCACACCCATACGGGCACTTCAGCCGCCGCACCTCT GGCCGCAGGTATATTTGCTTTGGTGTTAGAAGCAAACCGTAAACTGACAT GGCGTGATTTACAACATCTAGTAGCTCAAACCTCTAAAGTCATTAGTCCT GATGATTCAGATTGGCAAACCAACGGTGCTGGACACAAAGTCAATGTCAA ATTCGGATTCGGTGCTCTGGACACTAACAAATTGGTAGAAGTTGCATCTA GCTCCGATTGGAAAACAGCTAAGAAACAACACATCTGCGAGACGGATGTC AAAGTTGTTGATCTGTCTAAATCCGGGTCGACAGACAAAATTACTTCCTT TATTGAGACAGATTCGTGCGTTGTCGAGCAAGACAAATGCGTGACCAAAG TGGAGCACGTACATGTTGCTATCACATTACAATTTGGGCGTGGCCGTGCT TATCACACGCAACGTGGAAAACATTCAATCGTGTTGACCTCACCCTCAGG TACACGGTCGGATATCTTGAGACAGCGTGCTCGTGATACGTCCTATACTA AAGGATTCGAAAATTGGGAATTCCTCACCGTTCTACATTGGGACGAATCA CCTAAAGGGAAGTGGAAGTTGACCATCCGTGACGCGTCCAGTAAAGATTG GAGTCACAAGGTATTGAAATGGAGACTCAAATTCTCCGGTACTTGTGATA TCAAGAATGTCTTCAACATCAAAATTAACGAAACGGAAATTTGTGGAACA CACTGCCGCGAAGGATGTCCGTCACCGAACTTATTCGCAACTGAGTGTGT TGATTGTTCACAATACTGTGACTGCACTAGAGGTGAATGCGTTCCAGCAT GTGAGCCGCACTTAGAGGCTGATGACAATTTAAGACATTGCAAACGTTCT TTggaatttaaacataaaacaGATTCGGACAAGAAACATACCATCAAGCC GGCTGTTGCCATGCCGCTTTCCGCTAAATTTGCAATCATCTGTTTATCGC TTGTTGTTATAAGCCTCATGGTTGCTGGTATAGCATATTTTGCTGCTAAA ATGCCAAGTATCAAGAACTTACCTAAGGGATATCACGCTATGTCTAAGTA TCCGTGTGCGGAAAGCACGGGGGCCCAGGAAGGCGAAGAGGAAGAAGGCG AAGAGGATGTTGATGCAGATGTTCACACCAAACTGAATATCAAATCTTGA TGTGAAGAGAAGCTTTGTTAATTCAAGCTTGGGTGTATTTTAAGTCTGCA AATGCTTGATTATGAGAGATTAACACCTATAACTCTTAAAGAGTctgggt tcgagtttaccaGGAAAGATTGACGTGAAATATGAAGCCGGTTGATAGGT ATTGATAGGTATATCGCTGAAAGGTGGATTAATGAACAGTCAACATGATT TCAGTCTACATAATCATCATCATCTCACTTCGTTGAAAAACATGACGTAG GCTATCGAACGCCAGAATCACGTGTCTTCTTGCCATGTTTTGGATAACTT TCCTCATTCGTATGCGCAAGACCAATATTGCACTCAAGAATAaagcagat gagatggagtttttataagatactttaataattggtcatttcgaagtaat aaaaatgacgcgttctttagaaaaagtaacaaaattgttttattactggt taacgaccaaccaaatcaaataacagcttgtaaaaactccatctcgtcct gaataaaaaatgaaacacaATCCATGAATAAATATTTCTATCTCTAATTC TCTTTATTTATGGATTGTGTTTCATCCTTTATTTGATCAAATTATTGTAT TAAAAATGTTTGATGAACAAGCGAGACGAAAAATGTTTGTACTAAAGTCC TCTTTTTTATTTCGACGTTGGGTGGTTTGGTTTATGCTTTACACCCATCA AATTTTACACcatgttttttatcttttgttaCACGATCAGTTTAATTGCG TTAAAAAGACCTTGTTAGTGTTATAACTATTTTCGTATATATGTATTTTG ATAATAAGTAtttaagaaaatgattttttggcATAACCTTACTCCCTTAA CTCGCTTTGCCCACTTGACGATGCAACAACTCCGCTTAACTTAAGGTTTT TGAAGTACACACTTCTCGAGATAAAATCAGCCTCAATGGAATAATCTCTT CAAACAACAAAATATCGTTTTCAATTTTAATACAAAACCGTAATCGCTCG CAAACATTAATTATATCTGACGACGTTGAAGTATAGTAGCAACTCTCAAG TCTTTGAGAACGAGATTCACAGTTATTTTATGGATTTCGAGAAGAGCGTT TTCTTGTTTGGATATATTTGTTATACCGTTACATCCAATGAAAGGTTTTg ctagtttgagtaaagaaaacggttagagttaatttcatactcaaagtttt gTGCCATCCAGGATGGCAAACTTTCAGTGGAATAAACGTTCTATGAAAGA AAGGTTTTGATTGTGGTTTTTTTAAGATAATGAGTTTGGCGCTAGAGCCT CTACCAAAAGTACATTAACATATGAACAAGTAAAACTTGACCTGTATCTA TTAGTTTTTTCTACATTTCTTAAACCCCTGCATTCAATACCGTACCAGTC GGGATGGGCGAGCTGTTTTCTTTTTGTCAATTGTAACTTAAAGGCATTTT AGCTTTCCAGACGGAAGTATTTTGTCCTTATTCGCCTCCCCTAAGAAACA TCAAATCgtattgtttttttctaaaaatgtatttttgtacaatttcaTTG ATCAATAAtaaatggtaaaaaataaagtacatttttttgttattttgaaa agcTGGCCGGACAGTTTTTTCATTATTAGATAATATTTTTTAGTTTCTAT GTTATTAGAAAATTGTAGGTATTATTGTATAgtactttattttgtttttg tgagaCTAAGGTGTTGTTTGTGGTGTCTaatagtttgtttttaattatAT GCTATTTGTGACTTTAGTTTTCCGTGCATTCGAATTGCATCGAAATTTCG CCTCTTTTTGGCCATCTTTTTGGCCCtttttggcgttattttttcGTTGC TGGCGTAATCAGGGCCGGCGAATGGAATTGGCGATAAATTAGGGTCGGCG TAAAGGGCATAGAGTCTTTTGGAAACTAAAACattgttttagttcgaatt gcAGAAATAGTCAGCCTTTTTTCTCATTGAATCCTACTCTAACCAACTCA AAATTAGGCTTTTTAATTCTatgtatttctttttttgttccacCTCTAAT ctattattaaaatattttccaaaaattataaCTTAAAATTTTATACGAAA AATCTTATATGTGTTTGCGCTCTCTTGtaaataacttttgaatttaAGTT GCAAAT Run BLAST on NCBI transcript from alignment at scaffold_352:118551..133967+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061003 ID=TCONS_00061003|Name=TCONS_00061003|organism=Clytia hemisphaerica|type=transcript|length=15417bp|location=Sequence derived from alignment at scaffold_352:118551..133967+ (Clytia hemisphaerica) CATATCGTGCGCTCGCTTTGCTCTCACGAGAAGAAATCACCGGGCAGGGA
AAAATCGGCTCCGGAAAGTAAACATTGCTAAGATGACGAAACCATTTACC
TGCctgatttaaaattttggctTGGGTCGATGATCACTATTTGGGCGCCT
TCTGGAGTGCCcggctcaaaaagtctagcCGGATTTGTATATGATTTGAC
GAATCGagtggaaaataaaaattttggtgCAAACAAGTTTCAAAATCACA
ATCTCCAGTCACCTTTGAGGGAAAGATACAAGTTGAAAGATGACCTAAAT
CAAAGTAAAGACTTTAATTTCAAAGAGTAAAGGCCACTTGGCCTGATCCg
ttttagtttgatttattttttatctgCTTACACACTGATCTACaaatttc
atatatttttattatgaaatttttggctGTTGTTTCTTCTTTGAAATGGC
TTATTTTACTTTGTTTGTCTGTAACGATAGCTAGCCCGGATGATGAATTC
CATGACTCTATTGATGGAAGTCATGTATATACAAATACATGGGCTGTAGA
AATCCAAGGAGGAGCACGCGTTGCAAGAGACGTGGCTGAAAATCAGGGCT
TTCATTTTCATGGACCACTTGGAAGTATTGAAGATCATTAtatatttgaa
aacaaagatgTCAACAAAAGAAGTAGAAGAAGTGCAGATGATCACCATCA
AAACCTTAAAAGccacaaaaatgttttgtttgctGAGCAACAAAAGATTT
TGAGCCGGAAAAGAAGAGGATATGTTGAAGATCCCGATTATCGACTTCAA
TGGTATTTAAAAAATACTGGTGAGTTAAATTTCaatcaataaatattttg
ataaatttttatctATTGCTAGTTCaattgaatgattaaaaaactccagc
attgggccattccagaatttgtctgtaacaggggggcggacgacacagga
tttccaagGGCAAAAGCTTtcgccaaaattcgaaatttccaaggcgaaag
aagaaaatgtatgaatttccatggcaattgaatttaaaaaggtaaaaaat
tgtggaatttccgatgcattttgcaaaagtacatggatttttatcggaat
ttccgaccaccactggaaaagaaaaattatttccgaggctagaaaaaatt
aaaaaatgcacgtctTCCaaggggggtaacaaaaattttctgaatggCCC
ATTAGGCTGGGATCACAAAtactaccgtaacttggtctaatgttgacatc
cctcctctaaattcaacacccttttctagagctgaaaaattaaaaaaagg
tcgaaattttttaatttgcttAGTGGAAAgggaggaaaaatctttttcaa
tcaccgattccgactttcatattattcctatctctaaagaagggtgtcaa
aattagaagacggatgtagAGATTAGACCGTCTTACGGTATAACTTGTGT
TCGCCCAGGCGGTGTCAagcggtgtcaatcgaacgaatcgaatgccgaat
caattgaacgcaatcgaataattgcaattttcataataattgcaattcga
ttgttaaacgcaatcaaatcgcaatcgaatatcaccCGATTTGCTGTTTA
ATCGCTTTGATTATGTTTAATTGTATTTGATTACgattgattgattcaat
tgtattagattttattcgctttgNctttctaagggaatttcaccacggca
attcggccaccataatttttgcatacaattcaatatggcggatggaaagg
cgaaaaggtctatgcaAAAGTATCTTCTATTTATTTCTCTAGAAAAGCAA
AGTAAGACTTGAAGTAAGAGATTATAGACAAAGCAAAGTatagtgaagtt
ttgaagtaccgagtagataaagcaatagataaacgaatgaataaaatagt
gaagtagcgagttgataaagcaatagataagcGAGtaaataaagtagcga
agtagcgagtagataaagcaatagataaatgaGTAAATAAAGTACCGAAG
TAGCAAGTTGCTAAAGCAATAGATAAGgcgaaccctaaaaatatttttgt
ttccggtccaccgggtgacgaaaaaaacactcacccggccggccgcaaaa
aaatttttttgctaaatttcgatcccaaaactcgattttttaaagcactc
gtagaagttaaaatgatggtcttctttaccttaaatctgtagtaacttga
cactgctacaggcttcggcataagaaaaattcacgtgtgatcatcgcacg
cctagattttgatttacggtggtctaggcgtgcgattattcaaatactta
attttcatcgtttatattttcaattgtgttacaatatctctaagaactgg
cattctctttcattttgaatatttatcttcaattgCTAAAGGCTCCTGAT
TACgaagtgaacttttttgagaaaaaagtagagtgagagaaacatttccc
caattttttaaatcctcactttatgaatgtttctttttattttactcacN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
tgtttctatttattttactcacaaatcagcatgattcttctataaaaacc
aagttgtatataaaaaaaacattcttaaaagttgagttgcaagcaagaat
taacaaatacaatgcagggtttagtttgagatgaataaaatttcatttat
ataacaatgatcaggataaccccttcattccaagtgatttctaggcgtgc
attttacagtagaatataaaatatcacgtgCGATAAATCACCCGCCTCAA
AGactgattcacgaaagttttccaaacaaacaaacaaccctaaccctaac
gatgatgtacgaaaaaaaaatgcggccgggtgacgacgaaataaattttc
acccggacggtggaccggaaacaaaaatttttttcgggttcgcctaatct
aaccttactcgaacgcaatcaaacacaattgaatattacccaggaatcgg
ccgtttgaCGTTAtgttcgacaatcaaattgcGATTATTCCATcatgttc
gattgattcaatttttgtttgaagtttttcgaTTGACACGTTTGCTTCGT
Ctgaggcggcaatcacaaatattttaattttgcgtcctcgttgggtctaa
aaagtgagtcagtcagtcggtcggtcggtcggtcgtaaaaaatttcgggt
ttccatttttccttccatttttggagtgcatttttGGAGGAAACttccag
ccagccagcagccaaaacaaccgcatgtaatgggtggtttaaatttatga
cctttgaacactgtccGACCCCAtaatggcgcatgtaatgataaaaaaag
tcaaaatgctgcgcATGTGCTAGAAATCGCTCtcaaaaaatcggcaataa
aaaaatttttgaacgaaggaaaggtcattgacagaaaaagtcaGACAAAT
TTACCAACTCACcaactcaattctactcaatttttgagagtcggtcgggc
gacgcgaaacaaagatatttgtgattgccgcctgaccgactgataatttt
tcttacttttccgAATCTTTGAGTCAGAAAGTTGCAAAATTCTCAGAATT
AAATCCAATTTTATCCATTCCATCCTTCGCTTTACCCGccatcttttttc
aattttgatcgcACAAGAATTCAACTTCACCACATTTGAACAAAATAGGG
TTTGCATCTCGAAATCCAAGGACCGCTTTGAAAAACCGTCTATGTAAACA
CGGCAAAACAGCTGACTGTTTATTTTCGATTTCTGATAGATTTGATTTTT
GCCAGACTCATAGttttaaaatccatttttcCAACGTTTTTTCACCAACA
TTAAGTTGAAATACCTCCATTtaaagcatgttcaaagttcacaataacaa
ctttctttttattacggaaACCAAACAAGTGAGAAGAAGTcatttaaaac
taaaagtcagtgCTCCGTGGTTGTGTAATCCATTTTCACAGTTTTTTTAT
TCTACGTCATTTTATAAACCTCTTTGAAGAACGTGTCACtcaataaggaa
ttttataacatttcatgacagattaaaaagacaattagaaaacgaaagtt
tcttcatttttcattttcgcatttatggggaagaatgaaattttcagaag
atgctttattcgATATAATgattcccatttccgtaaaTACGTGATTCCCC
ATGGTTGCAAAATGGTagctatgggtaattcctttgttcttttgctattt
tcttttgttctgtgTGAGGTAAAAACGCTTTGTAAATCAAAGTAATTCAA
CTAACTGACCAACCGACTGACCGACTcatttttttacctaaaaaacAATg
tgaacacaagttatttgtgaccGCAGCCttaaaacaatgacacattAATG
GACATTTTGCTTTTTCACGATACCTTTTTATCTCTAGTTATAattagacc
ttttgctatttgACTCGTAACCCAAAGAATGCAGTCCTCTTCAGGGTtac
attttttaacaaaatttgcatgaatttcaaaacaagataAGCCCCAAATT
TCTCTAACCTCAGTAGCACACCTCTGTTGGACTGCAAATTAGTATTCTTG
AGTCCTGGAGTTCTATATATGGAATTATGGGCtatttttaaaagctttta
cATATAGAAAGGAGGAAAACCAAATCAAAGAGTGTTTTAGTTTTCCCATT
ATGATACTTGATAGGGTTTCTCACCATATTCTGCATCTTATACTCTCTGG
AAATGACAATATTTCTCAAAGAAGCTTTTTTGCATACAATTTTATTTCAG
ACTGTCTAAACTTGATTAAAGATTAATGCTAATGTTTCGTTCCTCTTCTT
TGAACACTCTTCTAGAACGTAAATTCTATTTAAATTGATATTCATATCTT
TTAAATCTTATAgtgtgatttttataaaaattcttgaaaatgtgGTTTCt
tatgcaatataattttgctGGTAGATTTAAAATAATCTACATTATAATAA
TCtcttctatttttaaagttttcatggattcaaaatattgattttctaaT
ACTGATTTTTCAAAACAGCTTAATTGGAACTATCACTTTTTTCGATTGAT
TTTTGACTCTCTTGCTTGTCATAGCATCAAAAACAGTCTAGTCAAAGTCT
TAATGTTAATAAAATTTATGTACTCAGCCGCAATTCTGACCCATAAACCT
ATAAAAAAGAAACCAGGTAACTCAGAGGGTTGAGAAAGATAAANCCATAA
ACCTATAAAAAAGAAACCAGGTAACTCAGAGGGTTGGGAAAGATAAGTCT
TGCTCAAAGAGTAATAATCGAGCCTCCTAGGGACAGTCTTTATCAGTATG
CATGGTTTTAAGTTTTATCCTAAGGTTCAGGGGGgtgtaattttaaaata
attttatgggAACACCTCCAAGCCATTTTAAATTATAGTTTGGAATTGGA
ATTGCTACTAAGGGGTGTCCAAGGAGCTTGCCTTTGAGGGGATCAGCTTA
TTCAATAACTGTATATTGCATATCATTGTAGACATCCCAGTTTATGAAAC
TTgccttaaaaatggcaattatGTTTGTTTCATAGATGAAGTCTTCTAGa
ctttcaaaattcttttttcattcatttaggTCAAACCAAGAGTAGATGTT
CACAATATCATGGTTACGAATCATTGGATATTAATGTTGCACCTGTTTGG
GAGAAAAACATCACCGGTCAAGGTGTTGTAGTATGTATCCTTGACGATGG
TCTGGAGTATACTCACCCTGATCTGAAACGGAACTATGAGGCACGTGCAA
GTCATGATTATAACGGGAATGATAATGACCCAATGCCAAGATACACATCA
GATCGAATCAATAAACATGGCACTAGGTAAGACTATATGGTTTTTCTGTG
GCTCTTCTATGGTAGTTGGTCTTTGGCGCTGAAATTTTCATATGAAATTA
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNgcgtctgcaacgacgggtaccctcgataattt
tgacagggtcactatggcatttcattgaacacaaacttccgttatcttaa
aaagacatatcatcgaggctaatgtagaaagtttagaagtataattttta
ttattgtattcagCATTTTAAAccaaaacgatgtcaggaattaacccaca
ttatagtattttaaaggcttttgatgtgcaacaagcaaaaccgttaaccg
gcgtttgcgacgacgggaaccgtctagttgcCACTAGATGTGTTTGTAGC
ATTGCAGAAATATGGAAATCTAAATGAAGTGACATAATTACTGACATTCC
AACTATATTGCTTTAGGAATTAAGTCGTTGTCATGGAAAGTACCTAATTT
TAATTTAAGTTGTTTTTATATATAGTCGAGCAGTTTAATTCAATGATGTT
GATCATGTGCTACTAATTAATTCCTTAATTATTGAGATTTTTCTTGATTA
TAAGTTTCCTGTTTACAAACGAATGCCCCTCCTCGATGTTCTGTAGTGAG
AGAAGAAAGTATTTAGTAAATCCTTAAAACATCTTCGGACTTAAtacaga
aaattttcaattcccCATTAGACTAGAATctagctttttgataattttta
tgacgtagtgaagtagactaggagcgtttggcgaggtcaccattttgaga
gaatgttaaaaatccaaataacaataaaactacttggagctcaaagatat
aatcaaaaatgagaaacaaacatcaatatcaGCTATTTgtaatcccttat
tctcaaataaaaacatcgcttcattctttttttacctccaaaaacaacta
aaatctaaGCAAAAGTATTTTGCCATATATTACCGGGCCATTTAATCGCG
CCATCTAGTCTATAAAATCTTTAAGTAGACCCCGGGCTAATTCTCCATGG
AAAAATCTGACAGCATCAATTTTATAACTTACCTTAACTTAAAACCTCGT
TCTTTTTTTGCACCAAAAAAGCACCTGTTTTTTTAGCAAATATATACTGA
GAACAATTATTCCATTTTAGAAAGGGGCCAACCTTTGATCCGTAGCATCT
TTCGTGGGACTCAACcgcatgtgattggttcgaaaTTATATAGGATTATA
TAGAATTTTTCTCGAGAGAGAGGGCTTGCGAATTAGGctggcaaaagttt
ttatggtaaaaaaacTGACGATGTAGGCAAAATTTCTAACCCCGAAAATG
ATCGATATCATAGTATAAAGCATgaaattatgagaaaaaaaagtATACTG
CAACACGTCTTTTACTCAAATATATAAAGAAATCAGGCTTTCGAAGTTCA
AAATTCTGTCAGTTAGGGTACGATTGAagtcaaattttgtctaaaacgTA
ACAGATTCCACAGTTTTTCCACAGGATATCAAATTTTAAATCGTCATATC
TTTCTGTGTGTATTAGTATAAGACCTTTTGTAGTGTACTTTTTGCTTAGA
ATTTCATGCTCCATCCGATGAtaacaataatttttgttgaattCGACTTT
taaaaatcgtcaattttttactAATCTTGGAGGTTATAAGTTTTGTCCCA
ctcaaaaaagtctcaaaatcctatctactttcgaaaatttttttttctaa
aaatcgtcaattttttactAATCTTGGAGGTTATAAGTTTTGTCCCActc
aaaaaagtctcaaaatcctatctactttcgaaccaatcacGTGCGGTCGA
GTCCCACGaaagatgctgcagatcaaagGTTGGCCCCTACTAATTTGCAG
TCTTTCTGGAGAACTACTTTAACAGTTAAGGAAAAAAAACAGAACAATAT
TTGGTTAAAATTGaagcaaaagcttttcggtcTTATACCATCATCGTTGC
TGTagatcaatatttttaaaagttatcttccatttaaaaaaactaagtaT
AAAAGTACATTACTCTGAGTTTCGTGTTTTCACACtaccgtaaatcaccg
attaagcgcccgtgcgctttttaaatttttcaggctctgagaggggcact
tattcaagcggggcgcttaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtccaatttttttc
gactgTTAATCATCTGAAGAGAAATTCTTATCCCGGAAATTAGCCTAGGC
CACcaattcgaataagcgcccctccctggaggggggtggcttattcaaag
gggggcgcttattcgagcggggcgcttataaaattattttaactaaatgg
gGGGCGTTTTTTCGAGCGGGGCACTAATTCAAGCCgggcgcttaatcggt
gatttacggtatTCATATGTACAAaatgattggaaaaaattgaaattcga
cgtaaaaagttaaaaaactgGATAGTTAGTGCAATAAAACTAggtaataa
aaacaatgatGAAAGCATTAAAAaggtattgaaaataaaatttatgattt
gtCCGGGGGGACCGATTCGAAGTTTTTTAGAATAAATTTGTTGTTATGAC
GACATTTAGAAATAAGTTCAGATCTCTGGTTAACGAGATCGAGTTCTGAC
GTAATTATATGAAATTTTTCTGTGAGACAGAGGTTACATTTTTTTGAGCC
ATTAACATACGGGTGGGCGTGGTCGATAATTTTCCATGACAATTTCGGCT
GTATATTTTTAATTTGTAGGTCCCAAACGTGGTTGGATAACTCTGTTTAC
GCTCTTTTGGTTTCATATTTGAAGGTGTGTTTATGTCCGTACCATCTTTG
TTTGAAGGTGTTTGCTGTTTAGCccatataaaatttttctatgtttgttt
cGGACTCTTCGATTTTGCATTGATAAATGACTTCGTTTTGGAGACATTTG
CCGTTTAACGGACAGTCAGTTTTTCTTCTGCAGTTGCATTGTTTGACGTT
TAGTGGTTCTGGTTCTGGTTCGTTTGAGTTGAGGATTTTTTGTTATGGGA
GGAAATGATGTTTGAAACATTTGGCATACATCTGTAACTAACTTTGAGAT
TATTTCTGTTATAAAGTTTGAAGTCTGtgattttttggaaagtttttcaT
GACAAAGTAAACTAATCTTTTTGCAACATTGGTTTTAACATTTGCACTAA
ATGGGGGGTTGGACCATATGATATTTCGTTTTCTGTTGCGGTGGTTTTCT
GTTGTTTCGTTGCTATAGATAGTAATTatcagtttttttataattccaaa
cattttcatttttcttcaatcaGATGTGCAGGAGAGGTGGCTGGTGAACG
AGGCAATGGTGTTTGTGGGCGTGGTGTGGCGTACAATAGTCGTGTGGGCG
GCATAAGAATGCTGGATGGCGAAGTAACTGATGCTGTAGAAGCAGGTACG
TTGTAGACAGATTAAAGCCACAATGGTAGGTTCTTAAGATAAttaataat
gacgtcattttctacGATCAAATTTGATCAGGCAATGAAAAATCCCTCAG
AATATTCCAAGGAAAAATATGGTAAAAATCCTTTGAAATCGGCTCCAGAC
ATTCAATAGATCCGAAttcaatttcgaaaaaaagttttcggCCCTTAAAG
GTCCAACTAGGAGATTTATCTGGATTTATTAACCAAAATAGAACTGAgtt
ataatttgataaaattgataataTAATTTCTTTCATTCACAGGCTCGTTG
TCTTTTGCGTCAGATTTCATTGATATTTACAGCAGCTCGTGGGGACCCGA
CGACGACGGTAAAACTGTCGACGGTCCAGGACCGTTAGCTAAGAAAGCCT
TCAGAAATGGTATGTTCAAGCAATtatttgaaattcgaactgaaatgatt
ttttttaatgagaGCCAAACAACGAAAAacttctataaaataaatttttg
atgcCTTGAGTTTCTTTCTAATggattttattccttttttcaggTATCAA
GAAAGGGCGTAAAGGGCGTGGCTCTATCTTCGTATGGGCGACCGGTAATG
GTGGCCGATACAGTGATTACTGTTCATGTGATGGTTACATCAATTCACCT
TTCACCATTTCCATTGGAGCTGTAGATAATTGTGGTCGCAAACCTTGGTA
TTCTGAAGCATGCCCGGGCACATTTGCGGTGACGTACAGTAGCGGAGAAC
CAACGGGGAATCGAGATAAACAGATCTCAACCACTGACTTGAGTGGCAAA
TGCACGCACACCCATACGGGCACTTCAGCCGCCGCACCTCTGGCCGCAGG
TAAGAAAAATGATGGCTTTGATTCTGACGTTTCCTAATCAGTTCATTGTT
GATGTTTTGCTTTCTTCCTCCATTTTCGATTTACTGCAATTTTATACAGC
TGTAAGAACTTTATCAATAAAAACTATCAAAGTATTATTTGCTAACGTTT
ACCACAAAAACGTATAAAGTTCCATTCAATCGGTTAAATTTCTAATTTCT
AGCTACTGTTCCACAAAGAAAACGAGGTCAAACCCCCCTGCATATATTTC
TTCTTCAGAGCCTTACCCCGGATTTTTCACGATATCTCAGACAAACACTA
ggcaaaaaaatatgatatgAAAAACATAGTCGATCATCATTTATATATAG
TTATTACTGTTTATTTTAGGTATATTTGCTTTGGTGTTAGAAGCAAACCG
TAAACTGACATGGCGTGATTTACAACATCTAGTAGCTCAAACCTCTAAAG
TCATTAGTCCTGATGATTCAGATTGGCAAACCAACGGTGCTGGACACAAA
GTCAATGTCAAATTCGGATTCGGTGCTCTGGACACTAACAAATTGGTAGA
AGTTGCATCTAGCTCCGATTGGAAAACAGCTAAGAAACAACACATCTGCG
AGACGGATGTCAAAGTTGTTGATCTGTCTAAATCCGGGTCGACAGACAAA
ATTACTTCCTTTATTGAGACAGATTCGTGCGTTGTCGAGCAAGACAAATG
CGTGACCAAAGTGGAGCACGTACATGTTGCTATCACATTACAATTTGGGC
GTGGCCGTGCTTATCACACGCAACGTGGAAAACATTCAATCGTGTTGACC
TCACCCTCAGGTACACGGTCGGATATCTTGAGACAGCGTGCTCGTGATAC
GTCCTATACTAAAGGATTCGAAAATTGGGAATTCCTCACCGTTCTACATT
GGGACGAATCACCTAAAGGGAAGTGGAAGTTGACCATCCGTGACGCGTCC
AGTAAAGATTGGAGTCACAAGGTATTGAAATGGAGACTCAAATTCTCCGG
TACTTGTGATATCAAGAATGTCTTCAACATCAAAATTAACGAAACGGAAA
TTTGTGGAACACACTGCCGCGAAGGATGTCCGTCACCGAACTTATTCGCA
ACTGAGTGTGTTGATTGTTCACAATACTGTGACTGCACTAGAGGTGAATG
CGTTCCAGCATGTGAGCCGCACTTAGAGGCTGATGACAATTTAAGACATT
GCAAACGTTCTTTggaatttaaacataaaacaGATTCGGACAAGAAACAT
ACCATCAAGCCGGCTGTTGCCATGCCGCTTTCCGCTAAATTTGCAATCAT
CTGTTTATCGCTTGTTGTTATAAGCCTCATGGTTGCTGGTATAGCATATT
TTGCTGCTAAAATGCCAAGTATCAAGAACTTACCTAAGGGATATCACGCT
ATGTCTAAGTATCCGTGTGCGGAAAGCACGGGGGCCCAGGAAGGCGAAGA
GGAAGAAGGCGAAGAGGATGTTGATGCAGATGTTCACACCAAACTGAATA
TCAAATCTTGATGTGAAGAGAAGCTTTGTTAATTCAAGCTTGGGTGTATT
TTAAGTCTGCAAATGCTTGATTATGAGAGATTAACACCTATAACTCTTAA
AGAGTctgggttcgagtttaccaGGAAAGATTGACGTGAAATATGAAGCC
GGTTGATAGGTATTGATAGGTATATCGCTGAAAGGTGGATTAATGAACAG
TCAACATGATTTCAGTCTACATAATCATCATCATCTCACTTCGTTGAAAA
ACATGACGTAGGCTATCGAACGCCAGAATCACGTGTCTTCTTGCCATGTT
TTGGATAACTTTCCTCATTCGTATGCGCAAGACCAATATTGCACTCAAGA
ATAaagcagatgagatggagtttttataagatactttaataattggtcat
ttcgaagtaataaaaatgacgcgttctttagaaaaagtaacaaaattgtt
ttattactggttaacgaccaaccaaatcaaataacagcttgtaaaaactc
catctcgtcctgaataaaaaatgaaacacaATCCATGAATAAATATTTCT
ATCTCTAATTCTCTTTATTTATGGATTGTGTTTCATCCTTTATTTGATCA
AATTATTGTATTAAAAATGTTTGATGAACAAGCGAGACGAAAAATGTTTG
TACTAAAGTCCTCTTTTTTATTTCGACGTTGGGTGGTTTGGTTTATGCTT
TACACCCATCAAATTTTACACcatgttttttatcttttgttaCACGATCA
GTTTAATTGCGTTAAAAAGACCTTGTTAGTGTTATAACTATTTTCGTATA
TATGTATTTTGATAATAAGTAtttaagaaaatgattttttggcATAACCT
TACTCCCTTAACTCGCTTTGCCCACTTGACGATGCAACAACTCCGCTTAA
CTTAAGGTTTTTGAAGTACACACTTCTCGAGATAAAATCAGCCTCAATGG
AATAATCTCTTCAAACAACAAAATATCGTTTTCAATTTTAATACAAAACC
GTAATCGCTCGCAAACATTAATTATATCTGACGACGTTGAAGTATAGTAG
CAACTCTCAAGTCTTTGAGAACGAGATTCACAGTTATTTTATGGATTTCG
AGAAGAGCGTTTTCTTGTTTGGATATATTTGTTATACCGTTACATCCAAT
GAAAGGTTTTgctagtttgagtaaagaaaacggttagagttaatttcata
ctcaaagttttgTGCCATCCAGGATGGCAAACTTTCAGTGGAATAAACGT
TCTATGAAAGAAAGGTTTTGATTGTGGTTTTTTTAAGATAATGAGTTTGG
CGCTAGAGCCTCTACCAAAAGTACATTAACATATGAACAAGTAAAACTTG
ACCTGTATCTATTAGTTTTTTCTACATTTCTTAAACCCCTGCATTCAATA
CCGTACCAGTCGGGATGGGCGAGCTGTTTTCTTTTTGTCAATTGTAACTT
AAAGGCATTTTAGCTTTCCAGACGGAAGTATTTTGTCCTTATTCGCCTCC
CCTAAGAAACATCAAATCgtattgtttttttctaaaaatgtatttttgta
caatttcaTTGATCAATAAtaaatggtaaaaaataaagtacatttttttg
ttattttgaaaagcTGGCCGGACAGTTTTTTCATTATTAGATAATATTTT
TTAGTTTCTATGTTATTAGAAAATTGTAGGTATTATTGTATAgtacttta
ttttgtttttgtgagaCTAAGGTGTTGTTTGTGGTGTCTaatagtttgtt
tttaattatATGCTATTTGTGACTTTAGTTTTCCGTGCATTCGAATTGCA
TCGAAATTTCGCCTCTTTTTGGCCATCTTTTTGGCCCtttttggcgttat
tttttcGTTGCTGGCGTAATCAGGGCCGGCGAATGGAATTGGCGATAAAT
TAGGGTCGGCGTAAAGGGCATAGAGTCTTTTGGAAACTAAAACattgttt
tagttcgaattgcAGAAATAGTCAGCCTTTTTTCTCATTGAATCCTACTC
TAACCAACTCAAAATTAGGCTTTTTAATTCTatgtatttctttttttgtt
ccacCTCTAATctattattaaaatattttccaaaaattataaCTTAAAAT
TTTATACGAAAAATCTTATATGTGTTTGCGCTCTCTTGtaaataactttt
gaatttaAGTTGCAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00061003-exon-scaffold_352-1491911889:118551..118854 | TCONS_00061003-exon-scaffold_352-1491911889:118551..118854 | Clytia hemisphaerica | exon |
TCONS_00061003-exon-scaffold_352-1510915933:118551..118854 | TCONS_00061003-exon-scaffold_352-1510915933:118551..118854 | Clytia hemisphaerica | exon |
TCONS_00061003-exon-scaffold_352-1575043694:118551..118854 | TCONS_00061003-exon-scaffold_352-1575043694:118551..118854 | Clytia hemisphaerica | exon |
TCONS_00061003-exon-scaffold_352-1491911889:119208..119369 | TCONS_00061003-exon-scaffold_352-1491911889:119208..119369 | Clytia hemisphaerica | exon |
TCONS_00061003-exon-scaffold_352-1510915933:119208..119369 | TCONS_00061003-exon-scaffold_352-1510915933:119208..119369 | Clytia hemisphaerica | exon |
TCONS_00061003-exon-scaffold_352-1575043694:119208..119369 | TCONS_00061003-exon-scaffold_352-1575043694:119208..119369 | Clytia hemisphaerica | exon |
TCONS_00061003-exon-scaffold_352-1491911889:124330..124576 | TCONS_00061003-exon-scaffold_352-1491911889:124330..124576 | Clytia hemisphaerica | exon |
TCONS_00061003-exon-scaffold_352-1510915933:124330..124576 | TCONS_00061003-exon-scaffold_352-1510915933:124330..124576 | Clytia hemisphaerica | exon |
TCONS_00061003-exon-scaffold_352-1575043694:124330..124576 | TCONS_00061003-exon-scaffold_352-1575043694:124330..124576 | Clytia hemisphaerica | exon |
TCONS_00061003-exon-scaffold_352-1491911889:129324..129445 | TCONS_00061003-exon-scaffold_352-1491911889:129324..129445 | Clytia hemisphaerica | exon |
TCONS_00061003-exon-scaffold_352-1510915933:129324..129445 | TCONS_00061003-exon-scaffold_352-1510915933:129324..129445 | Clytia hemisphaerica | exon |
TCONS_00061003-exon-scaffold_352-1575043694:129324..129445 | TCONS_00061003-exon-scaffold_352-1575043694:129324..129445 | Clytia hemisphaerica | exon |
TCONS_00061003-exon-scaffold_352-1491911889:129743..129859 | TCONS_00061003-exon-scaffold_352-1491911889:129743..129859 | Clytia hemisphaerica | exon |
TCONS_00061003-exon-scaffold_352-1510915933:129743..129859 | TCONS_00061003-exon-scaffold_352-1510915933:129743..129859 | Clytia hemisphaerica | exon |
TCONS_00061003-exon-scaffold_352-1575043694:129743..129859 | TCONS_00061003-exon-scaffold_352-1575043694:129743..129859 | Clytia hemisphaerica | exon |
TCONS_00061003-exon-scaffold_352-1491911889:129994..130299 | TCONS_00061003-exon-scaffold_352-1491911889:129994..130299 | Clytia hemisphaerica | exon |
TCONS_00061003-exon-scaffold_352-1510915933:129994..130299 | TCONS_00061003-exon-scaffold_352-1510915933:129994..130299 | Clytia hemisphaerica | exon |
TCONS_00061003-exon-scaffold_352-1575043694:129994..130299 | TCONS_00061003-exon-scaffold_352-1575043694:129994..130299 | Clytia hemisphaerica | exon |
TCONS_00061003-exon-scaffold_352-1491911889:130670..133967 | TCONS_00061003-exon-scaffold_352-1491911889:130670..133967 | Clytia hemisphaerica | exon |
TCONS_00061003-exon-scaffold_352-1510915933:130670..133967 | TCONS_00061003-exon-scaffold_352-1510915933:130670..133967 | Clytia hemisphaerica | exon |
TCONS_00061003-exon-scaffold_352-1575043694:130670..133967 | TCONS_00061003-exon-scaffold_352-1575043694:130670..133967 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_352 | supercontig | scaffold_352:118551..133967 + |
Blast
BLAST of TCONS_00061003 vs. Swiss-Prot (Human)
Match: NEC1 (Neuroendocrine convertase 1 OS=Homo sapiens GN=PCSK1 PE=1 SV=2) HSP 1 Score: 440.269 bits (1131), Expect = 1.704e-135 Identity = 259/556 (46.58%), Postives = 350/556 (62.95%), Query Frame = 1
Query: 265 LRERYKLKDDLNQNVNKRSRRSADDHHQNLKSHKNVLFAEQQKILSRKRRGYVED--------PDYRLQWYLKNTGQTKSRCSQYHGYESLDINVAPVWEKNITGQGVVVCILDDGLEYTHPDLKRNYEARASHDYNGNDNDPMPRYTSDRINKHGTRCAGEVAGERGNGVCGRGVAYNSRVGGIRMLDGEVTDAVEAGSLSFASDFIDIYSSSWGPDDDGKTVDGPGPLAKKAFXXXXXXXXXXXXSIFVWATGNGGRYSDYCSCDGYINSPFTISIGAVDNCGRKPWYSEACPGTFAVTYSSGEPTGNRDKQISTTDLSGKCTHTHTGTSXXXXXXXXXXXLVLEANRKLTWRDLQHLVAQTSKVIS-PDDSDWQTNGAGHKVNVKFGFGALDTNKLVEVASSSDWKTAKKQHIC---ETDVKVVDLSKSGSTDKITSFIETDSCVVEQDKCVTKVEHVHVAITLQFGRGRAYHTQRGKHSIVLTSPSGTRSDILRQRARDTSYTKGFENWEFLTVLHWDESPKGKWKLTIRDASSKDWSH-KVLKWRLKFSGT 1893
L Y K ++N +RSRRSA + L V++AEQQ R +R + D P + QWYL++T T + LD++V PVW+K ITG+GVV+ +LDDGLE+ H D+ NY+ AS+D+N ND+DP PRY NKHGTRCAGE+A + N CG GVAYNS+VGGIRMLDG VTDA+EA S+ F +DIYS+SWGP+DDGKTV+GPG LA+KAF G+K+GR+G+GSIFVWA+GNGGR D C CDGY +S +TISI + G PWY+E C T A +YSSG+ T D++I++ DL CT THTGTSA+APLAAGIFAL LEAN LTWRD+QHLV TS+ ++ W+ NGAG VN +FGFG L+ LV++A W++ ++ C + D + L +G ++ I T +C Q+ + +EHV T+++ R RG + LTS +GT + +L +R RDTS GF+NW+F++V W E+P G W L I D S + + +++ W+L GT
Sbjct: 64 LENHYLFK---HKNHPRRSRRSAFHITKRLSDDDRVIWAEQQYEKERSKRSALRDSALNLFNDPMWNQQWYLQDTRMTAA-------LPKLDLHVIPVWQKGITGKGVVITVLDDGLEWNHTDIYANYDPEASYDFNDNDHDPFPRYDPTNENKHGTRCAGEIAMQANNHKCGVGVAYNSKVGGIRMLDGIVTDAIEASSIGFNPGHVDIYSASWGPNDDGKTVEGPGRLAQKAFEYGVKQGRQGKGSIFVWASGNGGRQGDNCDCDGYTDSIYTISISSASQQGLSPWYAEKCSSTLATSYSSGDYT---DQRITSADLHNDCTETHTGTSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLANNPGWKKNGAGLMVNSRFGFGLLNAKALVDLADPRTWRSVPEKKECVVKDNDFEPRALKANG---EVIIEIPTRAC-EGQENAIKSLEHVQFEATIEYSR-------RGDLHVTLTSAAGTSTVLLAERERDTS-PNGFKNWDFMSVHTWGENPIGTWTLRITDMSGRIQNEGRIVNWKLILHGT 594
The following BLAST results are available for this feature:
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