TCONS_00061001 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061001
Unique NameTCONS_00061001
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2536

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061001 ID=TCONS_00061001|Name=TCONS_00061001|organism=Clytia hemisphaerica|type=transcript|length=2536bp
gaaagtgaacgatattctttgaaggaaaaacatcagaaacaaacccaaag
atcAAAAGacgtattttgttgttgagaatcgatcctgtgaagatgaaaac
aTTTCTGCTATGCgcttttttcggaacgctgaaaaactctaatttcaatc
ttccttaagTCACCACATGGGTCAAGAAACAATGAAGGTCTCTCGCAAAC
TTCATGGAATGAATAGGGACAGATTGGTAACAGAATTGAGGAACGATGAA
AACACAAAGAGTGGAATAGTTGTTATACAAGGAGGCGAATCTGAAACACT
TCATTCAAGTGACAGAGAGGTCGCATTTCGACAGgAATCATACTTTCACT
GGGCATTTGGATGTCGAGAGCCAGACTGTTATGGTGCAATTGAAGTTGAT
ACAGGAAGATGCATTTTATTTGTTCCTGAACTTCCTCAAGAATATATTGT
TTGGATGGGACAAATCCATCcaaaagaacattttcagaaGCTCTATGAAG
TAGATGAAGTTTATTTTACAAACGAGATTGCCAAAGTTCTTGAAGATAAA
AAACCGAAAACACTATTAACATTGAGAGGGCGAAATACAGACAGTGGTAA
ATATACGAAAGAAGCTGCATTTGATGGTATCAGCAACTTCACAGTGAACA
ATGAAATTCTTTTCCCTGTAATGTCGGAATGtcGTGTATTCAAAACTGAA
TATGAGTTAGACGTCATCAGATATGCAAATAAAATCAGCAGTGAAGCACA
TAAAGAGGTGATGAAACATATTCGACCGGGAATGACTGAATACCAACTAG
AAagTTTATTCCAACATTATTGTTATGTTCGCGGAGGATGTCGATTTCTG
GCATATACCTGTGTCTGTGGAAGTGGTACAAACTCGGCAACATTGCATTA
TGGACATGCAGGTGCGCCTAATGATAAACTGATTCAAGACGGTGATATGT
GtttATTTGATATGGGAGGTGAATATTACTGTTACACCTCAGACATCACT
TGTTCTTTCCCAGCAAATGGAAAGTTTACAGAACAGCAGAAGGGAATTTA
TAATGCGGTTTTGAAATCGAGTCGAGCTGTTTTGAACAGCGTAAAACCAG
GGGTCAGTTGGAAAGAAATGCACTTACTTGCCGACAAAACAAACTTGGAA
GAGATGAAGAAACTTGGAATCGTCCAAGGAGATGTCGATGAAATGATGAA
AGTTCGTTTAGGTGCTGTCTTCATGCCTCATGGCTTGGGACATTTTATGG
GCTGTGATGTCCATGATGTTCATGGATACCCTGATGGCGACAAAGAACAC
AGACCAAAGGAAGAAGGATTAAAAAGTTTACGAACAACACGTACTTTACA
ACAAAGCATGGTTCTCACCATCGAACCTGGAATTTACTTTATTGAACAGT
GGATTCGACGTGCACTTGCCAACCCAGCTCAAGCTTGTTTCATTGTACAA
AATGTCGTGGAGCAATACTTTAATTTCGGTGGGGTGAGAATCGAAGACGA
CATAGCGGTGACAGAGGAAGGGTGTGAACTGATGACCAATGTTCCCAGGA
CTGTCGAAGAAATTGAATCACTCATGGCTGAAGGACGCCAATCCAACGTC
AAAGTTATGTTTTAAGTCTGTTTGATGATAAATATCTTAAACTTCACGTG
CGCCGAAAACACCGACCATCATAATCAAGCAAATTCGACGTTCCTGGATC
AGTGATAACTGTTGAAATGCGGTTTATTTGACTTAAAACTGGTTAGATAT
AAGGTACTTTCTCTGGGTTAAGCTGGAGTCAAAGCTACCAAGAAAAAAAA
GGATAGCTTTCTATAAACTCAATGTGTTTTTCAGATCTGGATCGTGGATG
GTTGTAATTACCTGTTTTTTTTAGACTAAATAAtgagtttaaagtagttt
tgctGGATAATTATTTGAACTATTGGTACGGAATATTCCTTATCTAGAAA
TCATATTTCCATACTTCCACACATGGGGGTGTTTCTTCCGATGGATGTGC
ATTTTGAATAATTCATGTTGTATGTGTAGCATAGGGTTTTAGGGTGTGTT
AGACAATTGAATAAGGCCGACACCCTTTCTTTTTGGTTAAGTCTATTGTT
GTTTCATTAAAACTGTAAAGAACGACAAAACAAAAACTTCGTCCTAATAA
AAAGGAACCTAAAAACATTTTGTATTGCTTGCGgctttttttaaacaaga
aTAACTCTAAAAGGAAATAGGGTGTGTTTTTGTTTTGGCTTTCTTCTTCT
TGAGGTTTTACCACTTCCAGTTTTGTAATGTTTGCAGGAATAAAATTCAC
GGAATTATTGNactgtatgtactactgatgaactaaactcaaaaactaaa
actttaccataaatttacattacgacaatttaaaaatctatctttaatag
caacaaagaaataaacatggctcaaagttttaaaagcagagctagtcaga
gcttcaattcagtaggtatagagctttcaaaatttgaaaacagacactgc
attggttactacaagacatactatccacacggtttt
Run BLAST on NCBI

transcript from alignment at scaffold_352:100697..111457+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061001 ID=TCONS_00061001|Name=TCONS_00061001|organism=Clytia hemisphaerica|type=transcript|length=10761bp|location=Sequence derived from alignment at scaffold_352:100697..111457+ (Clytia hemisphaerica)
gaaagtgaacgatattctttgaaggaaaaacatcagaaacaaacccaaag
atcAAAAGacgtattttgttgttgagaatcgatcctgtgaagatgaaaac
aTTTCTGCTATGCgcttttttcggaacgctgaaaaactctaatttcaatc
ttccttaaggtaaagaggttgcaagatttgggttagcgaggcaaaaatcg
ctaaaaagctggtaaaatcgtaatcctcaaaaatcaaagttccagcctca
ctgtttTGGCTTTACCACCCTCAGAGCAGTAGGCACCTCTGTCANCAGCC
TCACTGTTTTGGCTTTACCACCCTCAAAGCAGTAGGCACCTCTGTCATTc
cgcaactctgtccaccattCTAAATGGCttgttaacaatagatccaaatg
ATCCTTTGAGGCAAAATCAATTtcaggaaaagctggaaaatcATAGAAac
ttccaaaaattgaaaatgcatGAGAAATCAAATTGTTCAAAAGTTGTCTC
TACTCTAAATCAtcataattaaaattttttgatgctTCTATCATGTAGTC
ACCACATGGGTCAAGAAACAATGAAGGTCTCTCGCAAACTTCATGGAATG
AATAGGGACAGATTGGTAACAGAATTGAGGAACGATGAAAACACAAAGAG
TGGAATAGTTGTTATACAAGGAGGCGAATCTGAAACACTTCATTCAAGTG
ACAGAGAGGTCGCATTTCGACAGGTAAATATatttatattaaatatataG
ATTTATTTAAGCCATTTTCACTAACAAAGTATTCATTCAACTTCGCATTC
CCATGCAAATGGTTCTagcaaagtgtttttttttttacatacaaGTTGAA
AAGTTATAACTTAGAATTAGAATTTCTACAGTTTGACAGTTCAAAGCTAA
CAAAATGATATCATGTAAAGCTATATAGTTAAAATTTCTTGACACTTTGA
CAGGGTATACTGTTTTGCTTTTCCAGAATAGAGCTACTACCAGTATCATA
TtccaatcaatttttttcattcaaggAATCATACTTTCACTGGGCATTTG
GATGTCGAGAGCCAGACTGTTATGGTGCAATTGAAGTTGATACAGGAAGA
TGCATTTTATTTGTTCCTGAACTTCCTCAAGAATATATTGTTTGGATGGG
ACAGTATGAGATTTTGTTTCTATCATCTTTTTATATATAGCACTTAAAAT
AATGGTGGGACATGggcattgtccgacccaaatagctCCTTGTCCAACCC
TAgaattataatttttataattttctctAATCAGACATTTTTTGCGATCA
cttatttttttaagcttatgagtTATTCCAAGCCATCTTTATATTAATGA
GCATAGAATTTCTAATAGACAGACTATTTGGATTAAGAAAAAGTATGATA
TAATATACATTATTGAATCTGAAAATCTAGTTCCACTGTTTGTTTTCTAG
AATCCATCcaaaagaacattttcagaaGCTCTATGAAGTAGATGAAGTTT
ATTTTACAAACGAGGTAtgcctttcaattttttgagaaaCAAGACAATCT
TTCATCGGATAGATTCTTCTGGAGAACCGTAAATCGAGACCAGAAAAAAA
CCTTTTATACGCTTTCTACATGAATGAAATAATGACATCATTTTGATAAA
TCATTGCCTTGTCTTTAGATTGCCAAAGTTCTTGAAGATAAAAAACCGAA
AACACTATTAACATTGGTAAGAAAAATTGATCTCAGTTAAATCAACTCCC
AAAGATCTCCAAAAATCTTCATTGATTCACTATTCAAAATATGATCTGTT
AACTACACCAAGAATGGATTAAAGGATTTCTTGTGGGAAATTACTCCAAA
ATCAAAGCATTTGCTAAGATTCTTATAAGTGATTACTAGaaaattgtatt
tatttttgaaaattacttaCCATTGAGGTCATTTTTGGGTAaattccata
caggggggtggacgaaccttttcaagtcaaaacaaaTTACTTGGAAATGT
GTGAATACCCCTtgtaaaatggcaaaatttgcaaaaaagaccctggaaaa
aattattttcatgtcttgaagtgagggtggacgaactaatattttacccc
ctggaagttCAAGAATAGCTTTTTACCCcttgaaagaatgacaaaacaCT
TCTTTAGACTTTCTGGAAATTCGTTTCAGATTACCCCCGGAAAAATTTCg
accaccccctgtatggatataaaatggaatggcccattttggcTTTTGTA
GCAAGTACATTCACTGAGTTGATAAGTTAAAACTTCTGAACAAAATACTG
TCTTTGTTGTTTGAAAGAGATAGGAAAcacataaatataaaaacataatt
GAAATACTCAAAATATTTGTCTTAATGTAATTTCACAGAGAGGGCGAAAT
ACAGACAGTGGTAAATATACGAAAGAAGCTGCATTTGATGGTATCAGCAA
GTATGACacatttttagacttatttTGCTGGAAACTAAACAAGACACTCT
TTAGGACTTTTTTCGCCCAAAAATGGATTACTTTTCGTAAAAGTTTTAAG
AAAGGTGCATCAGGATTCAAAATTTGACAAATCTATTTCTCTTTTGTTAG
tacttactcttgtctcccgaatagacgtcccccttgctaattgttaagag
aaaaaaatccatccccccgctcttattaagacccccctcCTGctaatcaa
attcaaaaaattcaatattttattactgtgtagatagaccttaaaaaaac
ttgttaaaatttttctttttttagtattggttcttattttacgtgttcat
ttgttaaagttttttgttgttgttgaaattgatatcagttaaaaaaattc
tgtcttcaaattaccccctccctcttattccatccccctgCTTAtaagaa
tttagaaaaatttcctaccccctgcttatttgggcccccgtctattcggg
agacaagagtacctACTTTGTGAAGTCAATTAacttcttttgttgttttt
atgtaATTCTGTGTTAAGAAATTTGGTCGttgatctttatttttctagca
aataaaacttttaaactttcttttttagCTTCACAGTGAACAATGAAATT
CTTTTCCCTGTAATGTCGGAATGGTAAGATTTTTTCCTGGTTAAACATGA
ATTCCGGTTAGATATTCTAGCTTATAATTTTTCCACTGCGTCTCTTCTTA
TAACCTTTTAAATCTaagtcaaaaataatcatttttgaaaactataaaAT
CACGCAAAAATGAGGTAATAAATTTCATGAATAAGAAAAAGGTTCTGTAC
AGTCTACAGTCGTGGTAAGATATTGGGAAACATAGCGTACTTATTTTCTT
GGAATAATGATACAATCGTAAAAATACCTTTTAGGGAAAAACTTATTTGG
GTAAAATTTAGTCACACAGGTAAAATTTAAGCCAGGAAAGATTTCGTCAC
TTTTGTGAATGTCTTGGCCACGACTCATTTGAAGTTGACTAGAAAGGTTG
CCGTGGAAAACTTCGTCACTTGTGTAAGCACTTTATAGAAACccttataa
tttttatttcattttagtcGTGTATTCAAAACTGAATATGAGTTAGACGT
CATCAGATATGCAAATAAAATCAGCAGTGAAGCACATAAAGAGGTTAGAG
ATGacgttttttcatttctttttgtttatttctataGAAAAACCTATCGA
TCTAATTTAAAAGGCCTAACAACACTTACTGTGTCTTTTTCCAATAACAA
GCTATTTTTCGAATCTTCAATGGAAATGTTTTGTTAAACCTTCAAAGGAC
AATgtattttttggatgtttttaatcTCTGTGACCTCATTTCATCAGGTG
ATGAAACATATTCGACCGGGAATGACTGAATACCAACTAGAAaggtaaaa
ttcaaaatttttgaagcctttagatgttcttgacttttttagttttaagc
ctaaaaatgttcttaacatgttcttgttttcgccattttttgagcatttt
tgtcatttttcttaagaaatcaggttctttagagtccgcgaagtcttaaa
atgttcttaatatgttcttaacattttagccatcaaagcctcatgttctt
atatagtttgttcttataaaaaaatgtgtatactAATTCCCTTGAGAGCG
GGTTTCACATGGCGGCAAAGTAGAGTGCACAGTAAAATCAAATGAACTTT
AGCTCTCTTGATCTAGATGTTTTTAGTAATTGAATCTGTTTTGAAAAACA
GCTCCCGAAATAAAGATGGGGTTCTTTGGAACTCTTAACTGTACATCTTG
AAATATAAGTCATCTCATTTTATACGGAGGATCAGTCAATCTATTAAATA
TGTATTTCATGAACGTAAGTGGTTTTGAAACTTCACCGAGCAATACTAGa
gtataaaaaaaaagaagaaatagtctagcaagctagacgactaattcaga
catagtagacaTAAAGCAagaagtaatggagggaacaagttaaatcccgt
aacaataatcgtattatcatataaacGACCCCATTCTACTTGTAAAAAAG
TTTATCCTCCAAATTTGCTTTTCAGTTTGTTTCAACATTACTGTTATGCA
AGAGGAGGGTGTCGATTTGTTTCCTACACTTGTATTTGTGGAAGGTATGT
CATTCGAgttcattttcatatttttttacaGTTTATTCCAACATTATTGT
TATGTTCGCGGAGGATGTCGATTTCTGGCATATACCTGTGTCTGTGGAAG
GTatcttttaaagggacataaaagtactgacgaaatttgtaaacaaaccg
catgcagcgggatacaaaatcaaaacaaatgtcacatgtcaaaataaaaa
acaaaacaaacatggctgattttgattgtttcaattgttttgcgagtttg
ttttggacacgtgattttaattgttctcttttaTGACACGttgttcgcgc
aatgtttacattttactacttttatgtccctttaaactttgtgatttttt
tttaagttttcagCTTTTTGACGATCTAACTTTTAACTCTTTTGGGATAA
AATAGATTTGTTGATTTGAAGTTCCTACTTTCCACCTatttatcaaagaa
aaaacattgagTGACTTGCACTGGCACTCTTGAACCTACACTGAAAGAAT
CACGGAAATCATAAAAgataataacaaaaataatagTTCTTAATTCAAAA
CTTTGCTCATATAAGATTTTGAAATTGCAATGAAAGACTAAAAGCAGATC
AGGTGCACTTATCGGTACCCAAGGTAACATTCTATACCAGTGAAATCTGG
TCAGTAAATTGAATAAAAGCATTCTTAGTTAACATTTTTTACCAGCGTTT
TTACTGGTAAAATGCTACATTGGGTACCCATAGGTGCATCTGATCCTTAA
AAGCATTATCTACATAATTTCCCAGACCTTAAGCAACTTTCTGTGCAATA
TTTGATACAGTCAAGAAGCTTGATATCGACGAGTGAAGCTTTTACAAAGT
AGGCATCTTGGCCTGCTTGGCTATGTTCAAATGGTACAAGTACTTAACtt
tgtttctttctttatcCTTTAAGTGGTACAAACTCGGCAACATTGCATTA
TGGACATGCAGGTGCGCCTAATGATAAACTGATTCAAGACGGTGATATGT
GGTGAGTTTTTGCCCCATGTTTACATCTAAACCTTACCATTAGTAAGGTT
TCTGGACACATCATTTAAATCAAagtctttcgaaaaaaaaaataattatg
gtATTCTGTAGGTTTGCAAAATTACAGCCTCCTTTATCTACTTCTCTTCA
GCCTTGGTAGTATTTTATTGAGGACTGAAATTTGTAGATTTAATGATTTT
TCGACACTGTAGTACCCTTTTATGCTGGAAGAACATACCCATTTACCCAT
TGCTATACGTTTTCCCAGGCAAACCCTTAGGTTTAAGGCAGTTTTTAAGC
TTTAAATTAAAGATAAAGTGGCTGTAGCTTGGGGAAAGAGCATCCAGCTA
CAGTACACAACCACAGATATCTGTAAAGCccgaagggctagatttgcggc
cttggtcaaaaagtgaagctcatctttggaaggatttcctaccagagtca
cgtgactaaaatatgcaatttcaccggtatgagagatgcgaaatagcgtt
tgccgcctacgttttttgatctcgcgctccgaaaacaattaaaatgctag
atcctatccatcggcacgaaatttaaaaagtcaaatttttgcttcacttt
tttttgctggagaaagcttaaagttgcctatctagcccttcgggcttaga
tatctgtgtaCACAACACAACCTtgtgcaccgtagctggatgccaGCCAG
GTCATACCAAAGGTAACAAAATGGTAATTGATATCTCTCTGCTTGTTGga
cagcaactaaagagacggatcaaagGTAATGGAGAAATTCAGGGAAAGGa
atggcgccctcccctaccttcaggtagaaacttagagaaaagggagcctt
cagGTTGCGTCCGACTGTGGTCGCAGACTGACTTATTTTAGTCTTAAACC
tattattgaaaataaagagggaaagtataatttttatattttgttttcat
attttcagtttATTTGATATGGGAGGTGAATATTACTGTTACACCTCAGA
CATCACTTGTTCTTTCCCAGCAAATGGAAAGTTTACAGAACAGCAGAAGG
GAATTTATAATGCGGTTTTGAAATCGAGTCGAGCTGTTTTGAACAGCGTA
AAACCAGGTAATAACTCTCTTCCTAAGTTAAACTGTTTGGCTCTTATAAT
CAAAGAGCAAATGTGATTTAAATGAAGGGAGGGTTTAGCTATAGGGATAT
AATATGATACACTAGAGTCTTCATAaatcgaacctctataattcgaatat
ctccttaactcgaaaaagtgaTCCCTTCAGTTACCagtctccgtaactcg
aaatttccaaaattcaaacaaattcgTTTTCCCCATGCtcgtttgagtta
tggagacgcCACTGTATATGAACATAATATGGAATAGGCTAGCAGAGTTA
AgaccctaaaatagcttttaataTACCCAGGGTCGTTGTTGTTGgatgat
ttttgaagattttttgcaTGTGCAAGTCATGATACGGTCAATTGATGTTT
TGTAACATTAAAGTGTATTAAAAGTGTATTAAGAATCTCTTTGGCTATAG
aggtcccggggggggggggggtactaggttttgCGAGGTTTGCtaataat
tgaaaaaatatatcataTGTCTGAGCGAAATTTCTAAAATCGATCCTTTG
AGAACTGAATTTCGATGTTTATGCCTCTCTTTGAGaaactattttttcaa
tttgtaGCTCAAAATAACCAgattttatgaccctttgagggagtcgattt
ttgatatttcataattttggaccctttcagagacttaattgctcgcacat
acccgacatCCCCCCCCGGGTAGAGGTTTTTCAGGTTGACAAAGTTACGT
AGTTACCATTATGgaagaaaacattgattttttCGCAAGGAGTTGTCTCt
acaaattcgaaaaatgttacacgtttttttaagaacatccaaattttttg
aagccttcggatgttcttaactttttgagttttaagccatgttttatgtt
cttatttttgtcattttgtgagtattttagtccaatttcctaagaaattg
gtcgtttagagtccgcaaaaccttaaaatgttctaagttgttcttaatat
tttggccatcaaagtctaatgttcttatatagtttgttcttgtaaaaaaa
atgtgttattTTTCTAAGGGGTCAGTTGGAAAGAAATGCACTTACTTGCC
GACAAAACAAACTTGGAAGAGATGAAGAAACTTGGAATCGTCCAAGGAGA
TGTCGATGAAATGATGAAAGTTCGTTTAGGTGCTGTCTTCATGCCTCATG
GCTTGGGACATTTTATGGGCTGTGATGTCCATGATGTTCATGGATACCCT
GATGTAAGTTTTCTATAGAAAAGGTTGTTAAAATTGTTTGAGATATCAAG
ACAAAATAAAGGGTAACGGTCTGTCTTCATGCCTCATGGTTTGGGTCATT
TTATGGGCTACGATGTCCATGATGTTCATGGATACCCCGATGTAAGTTTC
CTATagaaaaaactgttaaaatagtTTGGGATATCGAGACAAAATAAAGA
ATTAAATTCTGTTTGAGAATTGTTGCTCTGTATCAAAGTTCAGGTTATTT
TATGGGCTGTGTTAACCACGATGTTCATGGTTACCCTGATGTAAGTTTCC
TATAGAAAAGTCTGCTAAAATTGTTAGGGATATTGAGACAAAACAAAGGA
TAGTAGTATGTTTGGAAATTTCGTCACGGTTTGGGTCATTTTACGGGCTG
GGATATCCGTGATGTTCATGGGTACCATGATGTAACTTTCCTATAGAAGA
GACTGTTAAGATATATCAAGACAAATCAAAGAATGAGAGTCTGTTTGAGA
ATTTTGCTCTGCATCACGGTTTTGATTATTTGATGGGGTGTTGAGTAATA
CAACTCTAAATCAATTAAAGCATTATGCTGCTCTGGGCTACTTTAGATAA
tgtttcacctttcaaagttttCTTCTTGGCTTAGATTTTAAGCATAGATT
TCCAGAAGTATCGTCAGTCATGTGGTGATATCTCGATAATTATTCACAGA
ATATTTGATTTATCCACCACAGGGCGACAAAGAACACAGACCAAAGGAAG
AAGGATTAAAAAGTTTACGAACAACACGTACTTTACAACAAAGCATGGTT
CTCACCATCGAACCTGGAATTTACTTTATTGAACAGGTACAATGGAATTC
TAGTGTAAAAAAGCTCTTATCAACTCGAAAGGATTGTATGTACGAAGGCT
GTCAACATCCCTCTAATGCGTTTTGttataaaatctttttcaagaATAAA
CACAGCCTAGGTTTACGAACGTAAATTTCGTTAACCTCCAATAATTTACT
GtgcaatttaaaaaatcttggccaaaagttttataaaaacattggCCTCg
actaaaaaaaaacttaaaaagctAATTTTGAAAACACTTCCAGCTTTTCA
AAGTAGTTTAGTCAACATAGGTCTATtgtgagaacattttaagaaaatgt
tAGCCTGCATTTATAGCCTATTATTATACAAATCAATaactaaaattgtt
cttcttctttttccagTGGATTCGACGTGCACTTGCCAACCCAGCTCAAG
CTTGTTTCATTGTACAAAATGTCGTGGAGCAATACTTTAATTTCGGTGGG
GTAAGGATCATTTCGTTCATTGATATCGGGGGGTATAGTCTGGTCCGGTC
AATTTGTAATTTAAGCTAGTTGCTTAAGTTTGTACTTCTATATTATGTGT
GGTTTCAGTTCAACCTCAAATTAAGTCGAATCAGGATgcgaaagtttttg
aaattcacCTGGCTAGACACAACCCTAAGAggattcattttcaaattttc
atttttgtgaaatttatcctggtgaaaatttaaaatcaggattttttgcc
aaaactcGTATGAGAATTAAAGAAATTAggtgaaaaagaggctgattcgc
aaaattttgtCAACGCGAAAAGTTTAGTTCTTCGATTCGCGAAAAAAGGT
TCGTGCGAAAATCTATTCACTTAGATAAAACAATTACCTTACTATATCTC
ATTAACAGGTGAGAATCGAAGACGACATAGCGGTGACAGAGGAAGGGTGT
GAACTGATGACCAATGTTCCCAGGACTGTCGAAGAAATTGAATCACTCAT
GGCTGAAGGACGCCAATCCAACGTCAAAGTTATGTTTTAAGTCTGTTTGA
TGATAAATATCTTAAACTTCACGTGCGCCGAAAACACCGACCATCATAAT
CAAGCAAATTCGACGTTCCTGGATCAGTGATAACTGTTGAAATGCGGTTT
ATTTGACTTAAAACTGGTTAGATATAAGGTACTTTCTCTGGGTTAAGCTG
GAGTCAAAGCTACCAAGAAAAAAAAGGATAGCTTTCTATAAACTCAATGT
GTTTTTCAGATCTGGATCGTGGATGGTTGTAATTACCTGTTTTTTTTAGA
CTAAATAAtgagtttaaagtagttttgctGGATAATTATTTGAACTATTG
GTACGGAATATTCCTTATCTAGAAATCATATTTCCATACTTCCACACATG
GGGGTGTTTCTTCCGATGGATGTGCATTTTGAATAATTCATGTTGTATGT
GTAGCATAGGGTTTTAGGGTGTGTTAGACAATTGAATAAGGCCGACACCC
TTTCTTTTTGGTTAAGTCTATTGTTGTTTCATTAAAACTGTAAAGAACGA
CAAAACAAAAACTTCGTCCTAATAAAAAGGAACCTAAAAACATTTTGTAT
TGCTTGCGgctttttttaaacaagaaTAACTCTAAAAGGAAATAGGGTGT
GTTTTTGTTTTGGCTTTCTTCTTCTTGAGGTTTTACCACTTCCAGTTTTG
TAATGTTTGCAGGAATAAAATTCACGGAATTATTGNactgtatgtactac
tgatgaactaaactcaaaaactaaaactttaccataaatttacattacga
caatttaaaaatctatctttaatagcaacaaagaaataaacatggctcaa
agttttaaaagcagagctagtcagagcttcaattcagtaggtatagagct
ttcaaaatttgaaaacagacactgcattggttactacaagacatactatc
cacacggtttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038294XLOC_038294Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061001-exon-scaffold_352-1491911889:100697..100855TCONS_00061001-exon-scaffold_352-1491911889:100697..100855Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1510915933:100697..100855TCONS_00061001-exon-scaffold_352-1510915933:100697..100855Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1575043694:100697..100855TCONS_00061001-exon-scaffold_352-1575043694:100697..100855Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1491911889:101245..101419TCONS_00061001-exon-scaffold_352-1491911889:101245..101419Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1510915933:101245..101419TCONS_00061001-exon-scaffold_352-1510915933:101245..101419Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1575043694:101245..101419TCONS_00061001-exon-scaffold_352-1575043694:101245..101419Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1491911889:101722..101849TCONS_00061001-exon-scaffold_352-1491911889:101722..101849Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1510915933:101722..101849TCONS_00061001-exon-scaffold_352-1510915933:101722..101849Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1575043694:101722..101849TCONS_00061001-exon-scaffold_352-1575043694:101722..101849Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1491911889:102147..102210TCONS_00061001-exon-scaffold_352-1491911889:102147..102210Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1510915933:102147..102210TCONS_00061001-exon-scaffold_352-1510915933:102147..102210Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1575043694:102147..102210TCONS_00061001-exon-scaffold_352-1575043694:102147..102210Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1491911889:102365..102412TCONS_00061001-exon-scaffold_352-1491911889:102365..102412Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1510915933:102365..102412TCONS_00061001-exon-scaffold_352-1510915933:102365..102412Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1575043694:102365..102412TCONS_00061001-exon-scaffold_352-1575043694:102365..102412Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1491911889:103085..103146TCONS_00061001-exon-scaffold_352-1491911889:103085..103146Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1510915933:103085..103146TCONS_00061001-exon-scaffold_352-1510915933:103085..103146Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1575043694:103085..103146TCONS_00061001-exon-scaffold_352-1575043694:103085..103146Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1491911889:103775..103819TCONS_00061001-exon-scaffold_352-1491911889:103775..103819Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1510915933:103775..103819TCONS_00061001-exon-scaffold_352-1510915933:103775..103819Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1575043694:103775..103819TCONS_00061001-exon-scaffold_352-1575043694:103775..103819Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1491911889:104264..104339TCONS_00061001-exon-scaffold_352-1491911889:104264..104339Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1510915933:104264..104339TCONS_00061001-exon-scaffold_352-1510915933:104264..104339Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1575043694:104264..104339TCONS_00061001-exon-scaffold_352-1575043694:104264..104339Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1491911889:104544..104590TCONS_00061001-exon-scaffold_352-1491911889:104544..104590Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1510915933:104544..104590TCONS_00061001-exon-scaffold_352-1510915933:104544..104590Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1575043694:104544..104590TCONS_00061001-exon-scaffold_352-1575043694:104544..104590Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1491911889:105378..105446TCONS_00061001-exon-scaffold_352-1491911889:105378..105446Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1510915933:105378..105446TCONS_00061001-exon-scaffold_352-1510915933:105378..105446Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1575043694:105378..105446TCONS_00061001-exon-scaffold_352-1575043694:105378..105446Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1491911889:106270..106347TCONS_00061001-exon-scaffold_352-1491911889:106270..106347Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1510915933:106270..106347TCONS_00061001-exon-scaffold_352-1510915933:106270..106347Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1575043694:106270..106347TCONS_00061001-exon-scaffold_352-1575043694:106270..106347Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1491911889:107305..107453TCONS_00061001-exon-scaffold_352-1491911889:107305..107453Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1510915933:107305..107453TCONS_00061001-exon-scaffold_352-1510915933:107305..107453Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1575043694:107305..107453TCONS_00061001-exon-scaffold_352-1575043694:107305..107453Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1491911889:108515..108699TCONS_00061001-exon-scaffold_352-1491911889:108515..108699Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1510915933:108515..108699TCONS_00061001-exon-scaffold_352-1510915933:108515..108699Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1575043694:108515..108699TCONS_00061001-exon-scaffold_352-1575043694:108515..108699Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1491911889:109419..109532TCONS_00061001-exon-scaffold_352-1491911889:109419..109532Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1510915933:109419..109532TCONS_00061001-exon-scaffold_352-1510915933:109419..109532Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1575043694:109419..109532TCONS_00061001-exon-scaffold_352-1575043694:109419..109532Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1491911889:109913..109996TCONS_00061001-exon-scaffold_352-1491911889:109913..109996Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1510915933:109913..109996TCONS_00061001-exon-scaffold_352-1510915933:109913..109996Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1575043694:109913..109996TCONS_00061001-exon-scaffold_352-1575043694:109913..109996Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1491911889:110405..111457TCONS_00061001-exon-scaffold_352-1491911889:110405..111457Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1510915933:110405..111457TCONS_00061001-exon-scaffold_352-1510915933:110405..111457Clytia hemisphaericaexon
TCONS_00061001-exon-scaffold_352-1575043694:110405..111457TCONS_00061001-exon-scaffold_352-1575043694:110405..111457Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_352supercontigscaffold_352:100697..111457 +
Expression
No biomaterial libraries express this feature.
Blast
[Close]
BLAST of TCONS_00061001 vs. Swiss-Prot (Human)
Match: PEPD (Xaa-Pro dipeptidase OS=Homo sapiens GN=PEPD PE=1 SV=3)

HSP 1 Score: 627.476 bits (1617), Expect = 0.000e+0
Identity = 295/475 (62.11%), Postives = 364/475 (76.63%), Query Frame = 2 
Query:  158 SHHMGQETMKVSRKLHGMNRDRLVTELRNDENTKSG-IVVIQGGESETLHSSDREVAFRQESYFHWAFGCREPDCYGAIEVDTGRCILFVPELPQEYIVWMGQIHPKEHFQKLYEVDEVYFTNEIAKVLEDKKPKTLLTLRGRNTDSGKYTKEAAFDGISNFTVNNEILFPVMSECRVFKTEYELDVIRYANKISSEAHKEVMKHIRPGMTEYQLESLFQHYCYVRGGCRFLAYTCVCGSGTNSATLHYGHAGAPNDKLIQDGDMCLFDMGGEYYCYTSDITCSFPANGKFTEQQKGIYNAVLKSSRAVLNSVKPGVSWKEMHLLADKTNLEEMKKLGIVQGDVDEMMKVRLGAVFMPHGLGHFMGCDVHDVHGYPDGDKEHRPKEEGLKSLRTTRTLQQSMVLTIEPGIYFIEQWIRRALANPAQACFIVQNVVEQYFNFGGVRIEDDIAVTEEGCELMTNVPRTVEEIESLMA 1579
            S  +G ET+KV   L  +NR RL   LR +   ++G IVV+QGGE    + +D  V FRQES+FHWAFG  EP CYG I+VDTG+  LFVP LP  +  WMG+IH KEHF++ Y VD+V + +EIA VL  +KP  LLTLRG NTDSG   +EA+FDGIS F VNN IL P + ECRVFKT+ EL+V+RY NKISSEAH+EVMK ++ GM EY+LESLF+HYCY RGG R  +YTC+CGSG NSA LHYGHAGAPND+ IQ+GDMCLFDMGGEYYC+ SDITCSFPANGKFT  QK +Y AVL+SSRAV+ ++KPGV W +MH LAD+ +LEE+  +GI+ G VD M++  LGAVFMPHGLGHF+G DVHDV GYP+G +  R  E GL+SLRT R LQ  MVLT+EPGIYFI+  +  ALA+PA+A F+ + V++++  FGGVRIE+D+ VT+ G EL+T VPRTVEEIE+ MA
Sbjct:    8 SFWLGNETLKVPLALFALNRQRLCERLRKNPAVQAGSIVVLQGGEETQRYCTDTGVLFRQESFFHWAFGVTEPGCYGVIDVDTGKSTLFVPRLPASHATWMGKIHSKEHFKEKYAVDDVQYVDEIASVLTSQKPSVLLTLRGVNTDSGSVCREASFDGISKFEVNNTILHPEIVECRVFKTDMELEVLRYTNKISSEAHREVMKAVKVGMKEYELESLFEHYCYSRGGMRHSSYTCICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANGKFTADQKAVYEAVLRSSRAVMGAMKPGVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLGIDVHDVGGYPEGVE--RIDEPGLRSLRTARHLQPGMVLTVEPGIYFIDHLLDEALADPARASFLNREVLQRFRGFGGVRIEEDVVVTDSGIELLTCVPRTVEEIEACMA 480
The following BLAST results are available for this feature:
BLAST of TCONS_00061001 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PEPD0.000e+062.11Xaa-Pro dipeptidase OS=Homo sapiens GN=PEPD PE=1 S... [more]
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