TCONS_00060791 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00060791
Unique Name	TCONS_00060791
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2834

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_349:509990..520405+
coding sequence from alignment at scaffold_349:509990..520405+

transcript sequence

>TCONS_00060791 ID=TCONS_00060791|Name=TCONS_00060791|organism=Clytia hemisphaerica|type=transcript|length=2834bp
atagagttaaaaaaaaattatttcttcatttGCCTGACGACTCGGGAGTT
TTATTTGGTTACTAAAGATGGCATCACGTTTTCAACAAGAGATATTTGCT
TTAGAACCCCTGTCGATTGATCCAACGAATTGCAGTACACAAAAATCACT
CTACCagcaaatcaaaaaaagtcCACAAAAAGTATTGAACGAACAGAACA
AAAAGTTCAATTTAGGCAATGGGCAGTTTTTCAACGATCCGATCAAAGCC
GCTGATCAGCTTCTAGAACGTGAGTATGCTGATTCAGCACTTTTCGACTC
TACTCTCCACGAAGCCATTTTTATTCCACCTCTCTTCAAGTCAATCCAAT
ACGCGAAGACGGATTCAACGGTGCATATGCTCGATTACggagacgtcaaa
aaatcttcaatACAGAAATCGTTGGATAATTTGCAGACAATCAATCCAAA
CCATTGGTTTACCAAGGAGCTGCAATCCTTCCACGATCTCCAACACAAAA
ATTCTGGTGACGAAATCAACGCCACGGAANGTTTACCAAGGAGCTGCAAT
CCTTCCACGATCTCCAACACAAGAATTCTGGCGACGAAATCAAGACCATA
GATTTCGAAGAATGGATTCGCAATATCAAAATTATGCATTTACTGGTTGA
AGAGTTAGGAACGGACCAAGTGAACCTTCCCGCATCAACATCTGACAACC
AAACCTTCAAACAAGCTTGTATCCAAAAGCTGACAACGATTCAAGTATCT
CTACTCGATGAAGCTCTAAAGGCTAGGAACTATAGGAAGGCCATCGAAAA
GCTGGTCAAACAAAATCCACCAAAGGATCCCATCATGAGATGGTATTTCG
GATTCCAACCTGCTGAAGTCGGTGAAAAAGCAGAACGTTCcgtttttgaa
caattttattCCCTCAAAGATGACGAAGTGCTCCACGACATAGTTATTCT
GAATTCTCTTGACTTTCGTACTAATGTGAACAACCGCATGCAACAAGAAT
TTGACGTCCTTCTTTTCTCTTGGTCCAGAAAATTGATCATCGGAATCGAA
ATCAAACGGACACTCACCTCGACAAGAGCTTTTGAACAACTCGACAGATA
TCACAAGTTGATTGAAGAAAGATTGAGTGATCAACTCGGATCAGGTTGGA
CATTTTATCCAGCTCTTTGCATTGAGAACGATACTGAACTTTATGGCACT
CAACATTACATCAATCTGGACACTGATTTAAAAGGCTGGCTTGCAAACAT
CTTCACAAAATACCCTATTGTACCAACATCCATCCCCTACGTAGCCCCAA
TCAACCAACTTAAGGATGTTTTACGAATCGTCATTTTCGCTCTCCACTCT
TCCAAGACTGCACCCATCACAACAACAAATTGGGTGGAGTACATCACCGA
AGCCATTGATACCGTATGTACAACTGACAACATTATATTCTACAGTAAGA
AACAACTCCCCATCATGCGAGCAAACGATTCCCGTTTCAATAAAATGCTG
TTCTACGGTGGCTGGGGCTGTGGCAAGTCTTTCTTGCTGCAGCAAAAAGC
CAAACAGTTGAGTGGAATGAAAGAATACAAAGACAAGATAATGTACGTAG
TAGTAAAAAGTTTCTGGATAAATAAAGAAACTTTAACTTTATTAACATGG
AGATTGAAGAAAGAATTAGAAGAGCAATACGGAGTGATTGTTTGTGACAT
GGCGTTACTTGGTAATAACTGGAAAGAACTCATCATAAGGAAAAACATCA
AAGCCTTATTCATTGATGAATCCTGCATAATTAATGAATGGAAAGAAACG
ATTAACGACCTGGAAAAAGAAGTTGACATAATTTGGATCGCATTTAATTC
ACTCAGTCACTTAATCATTTTATCAGGTGATGAAGATCTTTCAAcgtata
acaatttcgcaaagTTCGAGCTTTCAACCAATCTACGCAACCACAAAGCT
ATTGTAGAAGAAGCAATAAAGTTGGACAAAGCGGAATTTGAGAGCCTTTC
TGGCTATGAAGAAGGTCTGAAATTTCCACCGTCAAATTTTCCAAACGCAC
GTCTCCCACTTCACGTAAAAAAGATAAATGACGCAATGGTGGAAATGCGT
CAAGTAACTGATGGTGCTGTTCTGATAATGGCTTACAAAAATGAATTGGA
AAAGATGAACATCAAATACAAATTTTATAGTGACAACAAGGATAACGATT
TCAATGAAGGTGAAAGTCCTTATCAACACCTGATGGATGGAAATGTTTTA
GTTATAACTGACCATAAACTGGTTACCGGTTTTGAGTGGCCCAACATCAT
CTACAACGATTACAGTTACGGCGGTAGTTTTGAAAAGCACCCATGTAATT
ACTACATGCGTTGTACCGCCAATCTCATCATTGTTGATCGTGAAAACGAA
AGCGACGAAGAAGCATCATCAGAAAACGAAGTCAGTGAAATTCCTTCAAA
ACGAAAGAGAGTGATCTGATACGATAGGATATTAAAGCGTCTTTCGTTAT
AACTAAGAATTAATTTGTAATTCATTAATAGCTGTGGTTTGTATGTATTT
TGTTTTCCAgaatattttgttcttttaaaagatgactttcagTTGAAACT
TGGTTCACAAAAATATTCTAGAGCCTGGTTTACACTTCCTTCAGTTTTAT
GTCCAACAAATGATTTCTTTTTGCACACGATACACCCATGTAATTATTTC
ATGCGGTGTACCGCCAATCTCATCATTGTTAACGAAGGAGCCTCATCAGA
CAACGAAgtcagtgaaatttcttcaaaataaaagaaagtgaTCTGATACA
ATAGGGTATCAAAACATCTTCTGTTTTAACTGAG

Run BLAST on NCBI

protein sequence of TCONS_00060791-protein

>TCONS_00060791-protein ID=TCONS_00060791-protein|Name=TCONS_00060791-protein|organism=Clytia hemisphaerica|type=polypeptide|length=611bp
MHLLVEELGTDQVNLPASTSDNQTFKQACIQKLTTIQVSLLDEALKARNY
RKAIEKLVKQNPPKDPIMRWYFGFQPAEVGEKAERSVFEQFYSLKDDEVL
HDIVILNSLDFRTNVNNRMQQEFDVLLFSWSRKLIIGIEIKRTLTSTRAF
EQLDRYHKLIEERLSDQLGSGWTFYPALCIENDTELYGTQHYINLDTDLK
GWLANIFTKYPIVPTSIPYVAPINQLKDVLRIVIFALHSSKTAPITTTNW
VEYITEAIDTVCTTDNIIFYSKKQLPIMRANDSRFNKMLFYGGWGCGKSF
LLQQKAKQLSGMKEYKDKIMYVVVKSFWINKETLTLLTWRLKKELEEQYG
VIVCDMALLGNNWKELIIRKNIKALFIDESCIINEWKETINDLEKEVDII
WIAFNSLSHLIILSGDEDLSTYNNFAKFELSTNLRNHKAIVEEAIKLDKA
EFESLSGYEEGLKFPPSNFPNARLPLHVKKINDAMVEMRQVTDGAVLIMA
YKNELEKMNIKYKFYSDNKDNDFNEGESPYQHLMDGNVLVITDHKLVTGF
EWPNIIYNDYSYGGSFEKHPCNYYMRCTANLIIVDRENESDEEASSENEV
SEIPSKRKRVI

Run BLAST on NCBI

transcript from alignment at scaffold_349:509990..520405+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00060791 ID=TCONS_00060791|Name=TCONS_00060791|organism=Clytia hemisphaerica|type=transcript|length=10416bp|location=Sequence derived from alignment at scaffold_349:509990..520405+ (Clytia hemisphaerica)
atagagttaaaaaaaaattatttcttcatttGCCTGACGACTCGGGAGTT
TTATTTGGTTACTAAAGATGGCATCACGTTTTCAACAAGAGATATTTGCT
TTAGAACCCCTGTCGATTGATCCAACGAATTGCAGTACACAAAAATCACT
CTACCagcaaatcaaaaaaagtcCACAAAAAGTATTGAACGAACAGAACA
AAAAGTTCAATTTAGGCAATGGGCAGTTTTTCAACGATCCGATCAAAGCC
GCTGATCAGCTTCTAGAACGTGAGTATGCTGATTCAGCACTTTTCGACTC
TACTCTCCACGAAGCCATTTTTATTCCACCTCTCTTCAAGTCAATCCAAT
ACGCGAAGACGGATTCAACGGTGCATATGCTCGATTACggagacgtcaaa
aaatcttcaatACAGAAATCGTTGGATAATTTGCAGACAATCAATCCAAA
CCATTGGTTTACCAAGGAGCTGCAATCCTTCCACGATCTCCAACACAAAA
ATTCTGGTGACGAAATCAACGCCACGGAANGTTTACCAAGGAGCTGCAAT
CCTTCCACGATCTCCAACACAAGAATTCTGGCGACGAAATCAAGACCATA
GATTTCGAAGAATGGATTCGCAATATCAAAATTATGCATTTACTGGTTGA
AGAGTTAGGAACGGACCAAGTGAACCTTCCCGCATCAACATCTGACAACC
AAACCTTCAAACAAGCTTGTATCCAAAAGCTGACAACGATTCAAGTATCT
CTACTCGATGAAGCTCTAAAGGTATTTTACTCATCTGTATGACACATACC
TGAACTttaaaaatatatcccatacacgttttttttttatatattaagGA
ACCTTGACTTGGCTCCccgcctggagttccttattttgccagagagtttc
agcttcaaagttccttatcgagttccttagtTACTTAACTGTTTGGATTT
GCTAAGTGTGTAGCTTCTTTATCagcattttttgtctttttgacaTATTG
AAAGGTGTTTGAGCAATATTTTCCGTCTTTTTATTTAGGTTGTTGTTAAT
GTGTGCAAGTTCAAATTGAAGCCGCTTCAATTGAGCCGTTccttaacttg
attttttattctcagcctgagcaatTCCTTGACAATTCCTTATTTCtcag
accattttcagcctcaagttccttataaacgtgttccttattaaaaaaaa
aacgtgtattatacTCTGTACCTTCCGATCTCATTGGTGCTATATACAAA
TAAAACATGTATTTCTTTTGTAATTCCTTCGATCCTTCAGGCTAGGAACT
ATAGGAAGGCCATCGAAAAGCTGGTCAAACAAAATCCACCAAAGGATCCC
ATCATGAGATGGTATTTCGGATTCCAACCTGCTGAAGTCGGTGAAAAAGC
AGAACGTTCcgtttttgaacaattttattCCCTCAAAGATGACGAAGTGC
TCCACGACATAGTTATTCTGAATTCTCTTGACTTTCGTACTAATGTGAAC
AACCGCATGCAACAAGAATTTGACGTCCTTCTTTTCTCTTGGTCCAGAAA
ATTGATCATCGGAATCGAAATCAAACGGACACTCACCTCGACAAGAGCTT
TTGAACAACTCGACAGATATCACAAGTTGATTGAAGAAAGATTGAGTGAT
CAACTCGGATCAGGTTGGACATTTTATCCAGCTCTTTGCATTGAGAACGA
TACTGAACTTTATGGCACTCAACATTACATCAATCTGGACACTGATTTAA
AAGGCTGGCTTGCAAACATCTTCACAAAATACCCTATTGTACCAACATCC
ATCCCCTACGTAGCCCCAATCAACCAACTTAAGGATGTTTTACGAATCGT
CATTTTCGCTCTCCACTCTTCCAAGACTGCACCCATCACAACAACAAATT
GGGTGGAGTACATCACCGAAGCCATTGATACCGTATGTACAACTGACAAC
ATTATATTCTACAGTAAGAAACAACTCCCCATCATGCGAGCAAACGATTC
CCGTTTCAATAAAATGCTGTTCTACGGTGGCTGGGGCTGTGGCAAGTCTT
TCTTGCTGCAGCAAAAAGCCAAACAGTTGAGTGGAATGAAAGAATACAAA
GACAAGATAATGTACGTAGTAGTAAAAAGTTTCTGGATAAATAAAGAAAC
TTTAACTTTATTAACATGGAGATTGAAGAAAGAATTAGAAGAGCAATACG
GAGTGATTGTTTGTGACATGGCGTTACTTGTAAGTTTAtttcattgttgt
tttttttcattttgggaTATGTATAGTGGGTAGATTCGCTGGAGTTAGGT
ATTCGGTATTCGGGATTCGGGATTCGCATTCGGGATTCGaaaaagctcaa
taaaaacttaacgaaaaaagatattaacttgaaataaaaaacagatGCAT
GTACACATACTAAGGAATAaatcccaataaaaaaaattcagaatatgagc
tcagttgtcacgtggctatgggaaattcccctattcgggattcaaattct
gtcagggacctttcttcaaaagctcgccagtcgtcagtaaatggttggat
tgacttcaaataaaaaacggatgcaagctcACATGTtagggaaaatattc
caaaaaaaaaaattcagaatatgagcttagttgtcacgtgactatgggaa
attcccctatttgggagttatttcaatttagagaccatttttaaaaagct
cgCCAGTCGTCATTAAGTTGTTGAATTGACGTTCAATTATTTTAGggacc
tttcttaaaaatgatttgattgactttaaataacaaacggatgcaagttc
acatgctaaggaacaaattccaaaaagaattattcagaatatgagcttag
ttgtcacgtgactatgggaaattccccttttcgggattcattttaattta
ggcacctttcttaaaaatgatttgattgactttaaataacaaacggatgc
aagttcacatgctaaggaacaaattccaaaaagaattattcagaatatga
gcttagttgtcacgtgactatgggaaattccccttttcgggattcatttt
aatttaggcacctttcttaaaaatctcataaaaactcaaggaagaaagat
attgacttcaaataacaaacggatgcaatttcacatatctgggaaagtat
tccaaaaaaactattcagaatatgagcttagttgtcacgtgactatggga
agttcacctttttgggagttatttcaatttagagaccttttttaaaagat
taccATGGATTGATCATGGATTGACTTCATtagcgttttctttttttttt
ttgaaggacattcatgtttcttttattagaacacctaaattttgattgag
gctgaatgttcttattttttcaaccattttcagccttagaTGTTCTTGTT
AATGTTCCTATATCTGGgtccaaataacaaaagaaatgtaTTGTCTCGAG
TGAACCGTAATAAACCCAACAGGTACTGAACGTTATCATAACATCCAAAC
AATGTTGTCTCAACATCAGAACGTCAAATCGTTCAAATTTTCCCATAGAT
CAGTTTACCCCCTTTTGTgtcttatacacgttttttttttataagaacgt
caaaaattttcgaagccttcggatgttcttagttttttggatttgaagcc
taaaaatgttcttaaaatgttcttattttcagcattttttgagcattttg
atgtaatttcttaagaaatgttcttaaatttttgggcctcgaagccttat
gttcttatatagtttgttcttataaaaaaaaaacgtgtacaccaTCATCT
GTTTCACCCACTATTATTCTGTCTCATTTTTCTCTACGCCCAAGCTACCT
TTTTAACGCACCTTCCTTCTCTTCATATACACGCAAAGACCCTCCACTAA
AATAATCAACTAGTCACTTACCAtaggtaaaaaataattcattatAAATT
CTTGGCGGTGAGTTAAATTCTTAATAAGGATGATTTCACAACTTATTGGT
AATAACAACTTATTGTTAATAATTGCTGAAAATTAAGCAATTTCGAACCG
GAAAAACTCCCTCCGAACCTGCCTGTCAATCAAACATAACAACTTCCAAT
CAACAACTACAATTGGAGAGTTGAATAAATAAAAGATGGGCAACTGCCAA
TCAAATTACAGCGAACAAATAAGAATAGCGAAAGCAAAACATTATGTCTT
CTTAAAACATTACGTCTTCAAACAATAGAATTACAAGGACTGCAGAACAT
CatcctttttgaaaattgctgtaTAAGAAGAAGGACCTCACTCTGAAAAA
ATGTTAGATGGTACGAATATATCTTTATCTCATTTTAGACTATCCCAATT
AAGGACATTTACATCCAATCAACAAATAGagtaatcaaaataatttatga
aaccATTTATTTAGcgctacaatcagtgacaaaatacttggcacaaaagg
gaaattcatcattgttttgaaaccacaatcgatttgtaagtgctctagag
taggttcgaagggtagagtttcaacgctagacttaagacttaggacctct
cccagatcgaaataatcgatgaaatcaagttgagggcctgaaattgacat
tctcgctcgaactttgAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaattttcgaaa
aatggtaaataagccaaaagtgcaaatatattatggcacggattgtactT
TTAAAATAACTACTGAGCTTGAGGATGTAGTATCTTAGATAGTATTGATA
CTACATGGCCCGCTGATCTATGAGAAGTTATTGAATTAAAGGGTCGAAAA
CTTCATATGAGTAGATCTGAGTCAACTGATGACCTCCTAAAAGCTCTTCA
ACTTAACAAAACGCAACAGATGATCCTTAAAATCCATGACATACAACAAC
AAACATTAtctcatataaaaacattatcttaaaaaatctcaataatCCCA
GAAGATGATGGGTTGTAAACCATAAAACTATATTATCTGTTGTACcaaat
cataaaaataaaaaactatttcattCATATCTCAATTGTTTGACTTCTTT
GACCTTCAGTATGGTGGCCCATAAGTgccaagtaattttttattaaaaaa
cacaaaaaaagattttttttataaatgaaaataactttcattttacaatt
taaattaactttcatttcaaaatcaatttaaaagtaatttcgttttcaaa
atgactTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTACTTTTCGATatcattttaaaaagcattttgttttttta
tttttaaaatcactttTCTCACGTAGCCCATCAGTGCCAAAGACAGCTTT
GTCTCCAGACTCCTACAGGCTTAAAATATTGAAGTTACTATGGTTACTTA
TTGGTTTGTTTACAGTTCACGGCCCATCAAGGCCAAAACAACTTAGTGCT
TAAACCccaaacatttttacaaatgtgtAGGAGAGTATAAAATGATATCC
TTTACTCCAGTGTTCTATGGTACCATAAATGGGAGATTTTTTGTCCGTCA
CAGTGCTTTTCCTTTCTATTGTTCATTGTTTGGCTGGTGCTGGTGGGTTG
TATTgtcttgaaaaatttacttctttttgcagacaaaattattcatcaaa
cAATGGGCAACATGAAAGAGCCTTTGTTTATTGATGTGTAAATAAAGAGt
cgaattttttcttaatataCAGCATGCGAGCATGAAAGGAAAAATGTTGA
GAAAAGaggaaatacacttttttttatataagaacaattttataagaaca
atgagactcaaaaatgccaagaaataaaaacaatttaagaacagtggaga
ggctgaagttagagagttagagcaaaaagaatcactggtttcaaaaagtt
tcaaaacttgttatttaccttagaaaaaataagaacaaaataagaacaat
tcaaggctcaaagtgccaaaaatttactggttcttataaaaaaagagtgt
aatagGAGGGAAGTTTTATTTACTTCCAACCCCTTTCATGTTGCCGCCAT
ATGCTTTAATACTTTTGGCTCCGAGCAGGAAACCTCAATGTGACCCCCCC
CCTAAAACAAACAACTGGTTCGTtctattatcaaaagaaactttATCTGT
TGAAATTTACTCATTTCTATGAATGGCCTCAGTGGGCTGTCAGatcaatt
catttaaaaaaaattaaaattgattttaaaatgacatGGCCTCGATGGGC
TGAGTtggaaatcatttttgaaaacaaacccgttttaaatttgaaacgaa
aatagaaactaaatcaattttgaaatcaaaatttagttcaaaacttaaat
taaaagCTATTGCAAAAGTGAATGTGgaaagtaaattattttgaattttt
tatataaaaatgtcaaaacaatttAACTTGGCTCTCATGGGCCACCATAC
TTCAGAAATCTGACTTAATTAGTTACATTAACTCTTTGTTACAGCTTAAG
GTCTCCATTTCTTTATAAATCTTATCGGCAGTATTCTGacctaatatatt
ttttttgtttttctttttcttttctttttttttcatcgaaataactccca
aaaagggaaatttcccatagtcacatgacaactaagctcatattctgaat
aatNcttttttggaatatttttccagatatgtgaacttgcatccgtttgt
tatttgaagtcgatacctttcttccttgagtttttatgagcttttcaaaa
aagttccctaaactgaaataactcccaaaaaggggaatttcccatagtca
cgtgacaactaagctcatattctgaataatctttgttggaatattttccc
agatatgtgaacttgcatccgtttgttatttgaagtcgatacctttcttc
cttgagtttttatgagcttttcaaaaaaggtcgctaaactgaaataactc
ccaaaaaggggaatttcccatagtcacgtgacaactaagctcatattctg
aataattctttttggaatttgttccttagcatgtgaacttgcatccgttt
gttatttgaagtcaatcaaatcatttttaagaaaggtccctaaactgaaa
taactcccaaaaaggggaatttcccatagtcacgtgacaactaagctcat
attctgaataatttttttttgaatattttcccagatatgtgaacttgtat
ccgtttgttatttgaagtcgatacctttcttccttgagtttttatgagct
tttcaaaaagttccctaaactgaaataactcccaaaaaggggaatttccc
atagtcacgtgacaactgagctcatattctgaataatttttgttggaata
ttttcccatatatgtgaacttgcatccgtttgttatttgaagtcgatacc
tttcttccttaagtttttatgagcttttcaaaaaaggtccctaaactgaa
ataactcccaaaaaggggaatttcccatagtcacgtgacaactaagctca
tattctgaataaatctttttggaatttgttccttagcatgtgaacttgca
tccgtttgttatttgaagtcaatcaaatcatttttaagaaaggtccctaa
aataattgaactcttaaaaaggggaatttcccatagtcacgtgacaatta
agctcatattctgaataattttttttggaatattctcccagatatgtgaa
cttgcatctgtttgttatttgaagtcgatacctttcttccttgagttttt
atgagcttttcaaaaagggtccctaaactgaaataactctcaaaaagggg
aatttcccgtagtcacgtgacaactaagctcatattctgaattttttttt
tggaattttttcccTAACATGTgagcttgcatccgttttttatttgaagt
caattcaaccatttactgacgaccggcgagctttttaaaaatggtctcTA
AATTGAACTAACTCCCAAATAgaggaatttcccatagtcacgtgacaact
aagcccatattctgaatttttttttttggaatatcttccttgacatgtga
acttgcatccgttttttatttgaagtcaattcaaccatttactgacgacc
ggcgagctttttaaaaatggtctctaaattgaaataactcccaaatagag
gaatttcccatagtcacgtgacaactaagctcatattctgaatttttttt
tttggaattttttcccTAACATGTgagcttgcatccgttttttatttgaa
gtcaatccaaccatttcctgatgactggtaagcttttgaagaaaggtccC
TGACAGGNATCCAACCATTTACTGACGACTGGCgagcttttgaagaaagg
tccctgacaggatttgaatcccgaataggggaatttcccatagccacgtg
acaactgagctcatattctgaattttttttattgggattTATTCCTTAGT
ATGTGTACATGCatctgttttttatttcaagttaatatcttttttcgtta
agtttttattgagctttttCGAATCCCGAATGCGAATCCCGAATCCCGAA
TCCCGAATACCCAACTCCAGCGAATCTACCTGTATAGTGAATGTCCTGAT
AAAGCACTTCAGATATTATTATTTATTGTCTAATGGGATCAAATTCGGAA
ATTCTATTTCGCAAGTTGTGAaaatttctgagaaaattttgatgatgGCC
GCATAAGCCGGAAAACAGCCGGATTTTATTGCTTAAGGATTTTCTCCTAA
AAAAAGTAAACCAAAGTGTATTAAATATAAAGTATCATAAGGAAAAAGTG
TTTTAGTTCATCTAAGGatctttaatatttttattaaagTTCCCTTGACT
ATCGTTGTTAAACTACAGTTACGAAAAGAACTCTAAAATTAATGACAGAG
CTTATTTCTTTAGTTATTACCTAATATGAGTATACTTGCTCTCCGTGAAT
AATTTTGAGTGCCTTCTGTAAACGCCGTTCGACTGGCTGATTGGCAAGAT
GCTAGTTTTTTAACGTCAGTTCAATCAAATTTCATTTAACAGGGTAATAA
CTGGAAAGAACTCATCATAAGGAAAAACATCAAAGCCTTATTCATTGATG
AATCCTGCATAATTAATGAATGGAAAGAAACGATTAACGACCTGGAAAAA
GAAGTTGACATAATTTGGATCGCATTTAATTCACTCAGTCACTTAATCAT
TTTATCAGGTGATGAAGATCTTTCAAcgtataacaatttcgcaaagTTCG
AGCTTTCAACCAATCTACGCAACCACAAAGCTATTGTAGAAGAAGCAATA
AAGTTGGACAAAGCGGAATTTGAGAGCCTTTCTGGCTATGAAGAAGGTCT
GAAATTTCCACCGTCAAATTTTCCAAACGCACGTCTCCCACTTCACGTAA
AAAAGATAAATGACGCAATGGTGGAAATGCGTCAAGTAACTGATGGTGCT
GTTCTGATAATGGCTTACAAAAATGAATTGGAAAAGATGAACATCAAATA
CAAATTTTATAGTGACAACAAGGATAACGATTTCAATGAAGGTGAAAGTC
CTTATCAACACCTGATGGATGGAAATGTTTTAGTTATAACTGACCATAAA
CTGGTTACCGGTTTTGAGTGGCCCAACATCATCTACAACGATTACAGTTA
CGGCGGTAGTTTTGAAAAGCACCCATGTAATTACTACATGCGTTGTACCG
CCAATCTCATCATTGTTGATCGTGAAAACGAAAGCGACGAAGAAGCATCA
TCAGAAAACGAAGTCAGTGAAATTCCTTCAAAACGAAAGAGAGTGATCTG
ATACGATAGGATATTAAAGCGTCTTTCGTTATAACTAAGAATTAATTTGT
AATTCATTAATAGCTGTGGTTTGTATGTATTTTGTTTTCCAgaatatttt
gttcttttaaaagatgactttcagTTGAAACTTGGTTCACAAAAATATTC
TAGAGCCTGGTTTACACTTCCTTCAGTTTTATGTCCAACAAATGATTTCT
TTTTGCACACGATACACCCATGTAATTATTTCATGCGGTGTACCGCCAAT
CTCATCATTGTTAACGAAGGAGCCTCATCAGACAACGAAgtcagtgaaat
ttcttcaaaataaaagaaagtgaTCTGATACAATAGGGTATCAAAACATC
TTCTGTTTTAACTGAG

Coding sequence (CDS) from alignment at scaffold_349:509990..520405+

>TCONS_00060791 ID=TCONS_00060791|Name=TCONS_00060791|organism=Clytia hemisphaerica|type=CDS|length=5508bp|location=Sequence derived from alignment at scaffold_349:509990..520405+ (Clytia hemisphaerica)
ATGCATTTACTGGTTGAAGAGTTAGGAACGGACCAAGTGAACCTTCCCGC
ATCAACATCTGACAACCAAACCTTCAAACAAGCTTGTATCCAAAAGCTGA
CAACGATTCAAGTATCTCTACTCGATGAAGCTCTAAAGGCTAGGAACTAT
AGGAAGGCCATCGAAAAGCTGGTCAAACAAAATCCACCAAAGGATCCCAT
CATGAGATGGTATTTCGGATTCCAACCTGCTGAAGTCGGTGAAAAAGCAG
AACGTTCcgtttttgaacaattttattCCCTCAAAGATGACGAAGTGCTC
CACGACATAGTTATTCTGAATTCTCTTGACTTTCGTACTAATGTGAACAA
CCGCATGCAACAAGAATTTGACGTCCTTCTTTTCTCTTGGTCCAGAAAAT
TGATCATCGGAATCGAAATCAAACGGACACTCACCTCGACAAGAGCTTTT
GAACAACTCGACAGATATCACAAGTTGATTGAAGAAAGATTGAGTGATCA
ACTCGGATCAGGTTGGACATTTTATCCAGCTCTTTGCATTGAGAACGATA
CTGAACTTTATGGCACTCAACATTACATCAATCTGGACACTGATTTAAAA
GGCTGGCTTGCAAACATCTTCACAAAATACCCTATTGTACCAACATCCAT
CCCCTACGTAGCCCCAATCAACCAACTTAAGGATGTTTTACGAATCGTCA
TTTTCGCTCTCCACTCTTCCAAGACTGCACCCATCACAACAACAAATTGG
GTGGAGTACATCACCGAAGCCATTGATACCGTATGTACAACTGACAACAT
TATATTCTACAGTAAGAAACAACTCCCCATCATGCGAGCAAACGATTCCC
GTTTCAATAAAATGCTGTTCTACGGTGGCTGGGGCTGTGGCAAGTCTTTC
TTGCTGCAGCAAAAAGCCAAACAGTTGAGTGGAATGAAAGAATACAAAGA
CAAGATAATGTACGTAGTAGTAAAAAGTTTCTGGATAAATAAAGAAACTT
TAACTTTATTAACATGGAGATTGAAGAAAGAATTAGAAGAGCAATACGGA
GTGATTGTTTGTGACATGGCGTTACTTGGTAATAACTGGAAAGAACTCAT
CATAAGGAAAAACATCAAAGCCTTATTCATTGATGAATCCTGCATAATTA
ATGAATGGAAAGAAACGATTAACGACCTGGAAAAAGAAGTTGACATAATT
TGGATCGCATTTAATTCACTCAGTCACTTAATCATTTTATCAGGTGATGA
AGATCTTTCAAcgtataacaatttcgcaaagTTCGAGCTTTCAACCAATC
TACGCAACCACAAAGCTATTGTAGAAGAAGCAATAAAGTTGGACAAAGCG
GAATTTGAGAGCCTTTCTGGCTATGAAGAAGGTCTGAAATTTCCACCGTC
AAATTTTCCAAACGCACGTCTCCCACTTCACGTAAAAAAGATAAATGACG
CAATGGTGGAAATGCGTCAAGTAACTGATGGTGCTGTTCTGATAATGGCT
TACAAAAATGAATTGGAAAAGATGAACATCAAATACAAATTTTATAGTGA
CAACAAGGATAACGATTTCAATGAAGGTGAAAGTCCTTATCAACACCTGA
TGGATGGAAATGTTTTAGTTATAACTGACCATAAACTGGTTACCGGTTTT
GAGTGGCCCAACATCATCTACAACGATTACAGTTACGGCGGTAGTTTTGA
AAAGCACCCATGTAATTACTACATGCGTTGTACCGCCAATCTCATCATTG
TTGATCGTGAAAACGAAAGCGACGAAGAAGCATCATCAGAAAACGAAGTC
AGTGAAATTCCTTCAAAACGAAAGAGAGTGATCTGAATGCATTTACTGGT
TGAAGAGTTAGGAACGGACCAAGTGAACCTTCCCGCATCAACATCTGACA
ACCAAACCTTCAAACAAGCTTGTATCCAAAAGCTGACAACGATTCAAGTA
TCTCTACTCGATGAAGCTCTAAAGGCTAGGAACTATAGGAAGGCCATCGA
AAAGCTGGTCAAACAAAATCCACCAAAGGATCCCATCATGAGATGGTATT
TCGGATTCCAACCTGCTGAAGTCGGTGAAAAAGCAGAACGTTCcgttttt
gaacaattttattCCCTCAAAGATGACGAAGTGCTCCACGACATAGTTAT
TCTGAATTCTCTTGACTTTCGTACTAATGTGAACAACCGCATGCAACAAG
AATTTGACGTCCTTCTTTTCTCTTGGTCCAGAAAATTGATCATCGGAATC
GAAATCAAACGGACACTCACCTCGACAAGAGCTTTTGAACAACTCGACAG
ATATCACAAGTTGATTGAAGAAAGATTGAGTGATCAACTCGGATCAGGTT
GGACATTTTATCCAGCTCTTTGCATTGAGAACGATACTGAACTTTATGGC
ACTCAACATTACATCAATCTGGACACTGATTTAAAAGGCTGGCTTGCAAA
CATCTTCACAAAATACCCTATTGTACCAACATCCATCCCCTACGTAGCCC
CAATCAACCAACTTAAGGATGTTTTACGAATCGTCATTTTCGCTCTCCAC
TCTTCCAAGACTGCACCCATCACAACAACAAATTGGGTGGAGTACATCAC
CGAAGCCATTGATACCGTATGTACAACTGACAACATTATATTCTACAGTA
AGAAACAACTCCCCATCATGCGAGCAAACGATTCCCGTTTCAATAAAATG
CTGTTCTACGGTGGCTGGGGCTGTGGCAAGTCTTTCTTGCTGCAGCAAAA
AGCCAAACAGTTGAGTGGAATGAAAGAATACAAAGACAAGATAATGTACG
TAGTAGTAAAAAGTTTCTGGATAAATAAAGAAACTTTAACTTTATTAACA
TGGAGATTGAAGAAAGAATTAGAAGAGCAATACGGAGTGATTGTTTGTGA
CATGGCGTTACTTGGTAATAACTGGAAAGAACTCATCATAAGGAAAAACA
TCAAAGCCTTATTCATTGATGAATCCTGCATAATTAATGAATGGAAAGAA
ACGATTAACGACCTGGAAAAAGAAGTTGACATAATTTGGATCGCATTTAA
TTCACTCAGTCACTTAATCATTTTATCAGGTGATGAAGATCTTTCAAcgt
ataacaatttcgcaaagTTCGAGCTTTCAACCAATCTACGCAACCACAAA
GCTATTGTAGAAGAAGCAATAAAGTTGGACAAAGCGGAATTTGAGAGCCT
TTCTGGCTATGAAGAAGGTCTGAAATTTCCACCGTCAAATTTTCCAAACG
CACGTCTCCCACTTCACGTAAAAAAGATAAATGACGCAATGGTGGAAATG
CGTCAAGTAACTGATGGTGCTGTTCTGATAATGGCTTACAAAAATGAATT
GGAAAAGATGAACATCAAATACAAATTTTATAGTGACAACAAGGATAACG
ATTTCAATGAAGGTGAAAGTCCTTATCAACACCTGATGGATGGAAATGTT
TTAGTTATAACTGACCATAAACTGGTTACCGGTTTTGAGTGGCCCAACAT
CATCTACAACGATTACAGTTACGGCGGTAGTTTTGAAAAGCACCCATGTA
ATTACTACATGCGTTGTACCGCCAATCTCATCATTGTTGATCGTGAAAAC
GAAAGCGACGAAGAAGCATCATCAGAAAACGAAGTCAGTGAAATTCCTTC
AAAACGAAAGAGAGTGATCTGAATGCATTTACTGGTTGAAGAGTTAGGAA
CGGACCAAGTGAACCTTCCCGCATCAACATCTGACAACCAAACCTTCAAA
CAAGCTTGTATCCAAAAGCTGACAACGATTCAAGTATCTCTACTCGATGA
AGCTCTAAAGGCTAGGAACTATAGGAAGGCCATCGAAAAGCTGGTCAAAC
AAAATCCACCAAAGGATCCCATCATGAGATGGTATTTCGGATTCCAACCT
GCTGAAGTCGGTGAAAAAGCAGAACGTTCcgtttttgaacaattttattC
CCTCAAAGATGACGAAGTGCTCCACGACATAGTTATTCTGAATTCTCTTG
ACTTTCGTACTAATGTGAACAACCGCATGCAACAAGAATTTGACGTCCTT
CTTTTCTCTTGGTCCAGAAAATTGATCATCGGAATCGAAATCAAACGGAC
ACTCACCTCGACAAGAGCTTTTGAACAACTCGACAGATATCACAAGTTGA
TTGAAGAAAGATTGAGTGATCAACTCGGATCAGGTTGGACATTTTATCCA
GCTCTTTGCATTGAGAACGATACTGAACTTTATGGCACTCAACATTACAT
CAATCTGGACACTGATTTAAAAGGCTGGCTTGCAAACATCTTCACAAAAT
ACCCTATTGTACCAACATCCATCCCCTACGTAGCCCCAATCAACCAACTT
AAGGATGTTTTACGAATCGTCATTTTCGCTCTCCACTCTTCCAAGACTGC
ACCCATCACAACAACAAATTGGGTGGAGTACATCACCGAAGCCATTGATA
CCGTATGTACAACTGACAACATTATATTCTACAGTAAGAAACAACTCCCC
ATCATGCGAGCAAACGATTCCCGTTTCAATAAAATGCTGTTCTACGGTGG
CTGGGGCTGTGGCAAGTCTTTCTTGCTGCAGCAAAAAGCCAAACAGTTGA
GTGGAATGAAAGAATACAAAGACAAGATAATGTACGTAGTAGTAAAAAGT
TTCTGGATAAATAAAGAAACTTTAACTTTATTAACATGGAGATTGAAGAA
AGAATTAGAAGAGCAATACGGAGTGATTGTTTGTGACATGGCGTTACTTG
GTAATAACTGGAAAGAACTCATCATAAGGAAAAACATCAAAGCCTTATTC
ATTGATGAATCCTGCATAATTAATGAATGGAAAGAAACGATTAACGACCT
GGAAAAAGAAGTTGACATAATTTGGATCGCATTTAATTCACTCAGTCACT
TAATCATTTTATCAGGTGATGAAGATCTTTCAAcgtataacaatttcgca
aagTTCGAGCTTTCAACCAATCTACGCAACCACAAAGCTATTGTAGAAGA
AGCAATAAAGTTGGACAAAGCGGAATTTGAGAGCCTTTCTGGCTATGAAG
AAGGTCTGAAATTTCCACCGTCAAATTTTCCAAACGCACGTCTCCCACTT
CACGTAAAAAAGATAAATGACGCAATGGTGGAAATGCGTCAAGTAACTGA
TGGTGCTGTTCTGATAATGGCTTACAAAAATGAATTGGAAAAGATGAACA
TCAAATACAAATTTTATAGTGACAACAAGGATAACGATTTCAATGAAGGT
GAAAGTCCTTATCAACACCTGATGGATGGAAATGTTTTAGTTATAACTGA
CCATAAACTGGTTACCGGTTTTGAGTGGCCCAACATCATCTACAACGATT
ACAGTTACGGCGGTAGTTTTGAAAAGCACCCATGTAATTACTACATGCGT
TGTACCGCCAATCTCATCATTGTTGATCGTGAAAACGAAAGCGACGAAGA
AGCATCATCAGAAAACGAAGTCAGTGAAATTCCTTCAAAACGAAAGAGAG
TGATCTGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_038192	XLOC_038192	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00060791-protein	TCONS_00060791-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00060791-exon-scaffold_349-1491911889:509990..510760	TCONS_00060791-exon-scaffold_349-1491911889:509990..510760	Clytia hemisphaerica	exon
TCONS_00060791-exon-scaffold_349-1510915933:509990..510760	TCONS_00060791-exon-scaffold_349-1510915933:509990..510760	Clytia hemisphaerica	exon
TCONS_00060791-exon-scaffold_349-1575043694:509990..510760	TCONS_00060791-exon-scaffold_349-1575043694:509990..510760	Clytia hemisphaerica	exon
TCONS_00060791-exon-scaffold_349-1491911889:511280..512218	TCONS_00060791-exon-scaffold_349-1491911889:511280..512218	Clytia hemisphaerica	exon
TCONS_00060791-exon-scaffold_349-1510915933:511280..512218	TCONS_00060791-exon-scaffold_349-1510915933:511280..512218	Clytia hemisphaerica	exon
TCONS_00060791-exon-scaffold_349-1575043694:511280..512218	TCONS_00060791-exon-scaffold_349-1575043694:511280..512218	Clytia hemisphaerica	exon
TCONS_00060791-exon-scaffold_349-1491911889:519282..520405	TCONS_00060791-exon-scaffold_349-1491911889:519282..520405	Clytia hemisphaerica	exon
TCONS_00060791-exon-scaffold_349-1510915933:519282..520405	TCONS_00060791-exon-scaffold_349-1510915933:519282..520405	Clytia hemisphaerica	exon
TCONS_00060791-exon-scaffold_349-1575043694:519282..520405	TCONS_00060791-exon-scaffold_349-1575043694:519282..520405	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_349	supercontig	scaffold_349:509990..520405 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.166292	0.193266	0.259157	0.0932782	4.8191	3.60545	2.81263	4.04803	1.56437	2.74035	1.43562	1.129	3.83015	3.41283	1.94824	2.73918	1.24683	1.9928	2.136	1.63172	1.09499	0.915337	0.826215	0.664522	3.24487	3.13378	3.70909	2.16892	0.544027	0.568299

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00060791 vs. Swiss-Prot (Human)

BLAST of TCONS_00060791 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00060791 (transcript) - C. hemisphaerica