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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060750 ID=TCONS_00060750|Name=TCONS_00060750|organism=Clytia hemisphaerica|type=transcript|length=982bp
GCAGTAAGCGATGGGTGTTCTGTAGTGGGCGGTGGGTGTTCTTCAGTAAG
GGGCGGGTGTTCTGAAGTGGTCGGTTCGAGTTTACCCTGTACATAATCAT
GATTTAGTTGATTATGGCATTCAGAATATAATTGTGAGTTTTGATTCGTT
TCTTGTACTGGGATAACCTTGTCTACCAAAATGTTCCTCGGCTGCCGTAA
ATCTGGCTGATCAGGGCGCTTCGCTGGTTCAATTCCTCTCTCATGTCTAT
CCTCGTGTGGATCATTATTTTGATTAGCTTCAATATTTCCTTCAGCCATA
TATCTTGGATTGTGCTCCCCATTCTGTAATAGCGGATCTTGTTCTGGATT
TTCAGGACCCTGATATCTGCAACAATATTCAGACAGAACATCGCTAGTCC
AGACACAGTATAAGAAAATTTGTTGTCGGAATTTCCTCTCGATTGCTAGT
ATAAGTGTAACATTAAGCAAGGGAGCAATCAAAACGAAAGAAAGCAGTAA
ATCTCCATCATCTAAAGAATTATTGATCTTCCATGCCTGTAATATACATT
CTCTTTGTGATGAACAAAGATCCGTACCTTTATCAAATATATTGAGATAC
GTGGTAATGTAAAAAGTCAATCCAGCACCATGAATTATAGACAATACACA
ATAAACCCAGAGTGAAAAATCATCCAATACCGGGTTGAATGCATTATCTC
TCCAGCAGCAGGAAAACCTCCATGCGCTTTTCACAGCGAGTATGTAGATA
ACAAGACCACCCAATGTTATTGGGCTCAATATGATAGCATAATACGATGT
GATAATGTTCTCCGGGTAATAAAACGCAACAATAGTATTGATTACGATGA
AGACAAAACCTTTACAGACAAGAGAAATATAAAGCTCCCCTCGTAAGTTT
TGGTTGGCTGTTTTGTAGTGTAGGTAGTAATCGGTGATTATAAATATGAG
GACTAGTAATAATTGAGCCATATTAAAGCCGA Run BLAST on NCBI protein sequence of TCONS_00060750-protein >TCONS_00060750-protein ID=TCONS_00060750-protein|Name=TCONS_00060750-protein|organism=Clytia hemisphaerica|type=polypeptide|length=326bp
GFNMAQLLLVLIFIITDYYLHYKTANQNLRGELYISLVCKGFVFIVINTI
VAFYYPENIITSYYAIILSPITLGGLVIYILAVKSAWRFSCCWRDNAFNP
VLDDFSLWVYCVLSIIHGAGLTFYITTYLNIFDKGTDLCSSQRECILQAW
KINNSLDDGDLLLSFVLIAPLLNVTLILAIERKFRQQIFLYCVWTSDVLS
EYCCRYQGPENPEQDPLLQNGEHNPRYMAEGNIEANQNNDPHEDRHERGI
EPAKRPDQPDLRQPRNILVDKVIPVQETNQNSQLYSECHNQLNHDYVQGK
LEPTTSEHPPLTEEHPPPTTEHPSLT Run BLAST on NCBI transcript from alignment at scaffold_348:158183..159164 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060750 ID=TCONS_00060750|Name=TCONS_00060750|organism=Clytia hemisphaerica|type=transcript|length=982bp|location=Sequence derived from alignment at scaffold_348:158183..159164 (Clytia hemisphaerica)
TCGGCTTTAATATGGCTCAATTATTACTAGTCCTCATATTTATAATCACC
GATTACTACCTACACTACAAAACAGCCAACCAAAACTTACGAGGGGAGCT
TTATATTTCTCTTGTCTGTAAAGGTTTTGTCTTCATCGTAATCAATACTA
TTGTTGCGTTTTATTACCCGGAGAACATTATCACATCGTATTATGCTATC
ATATTGAGCCCAATAACATTGGGTGGTCTTGTTATCTACATACTCGCTGT
GAAAAGCGCATGGAGGTTTTCCTGCTGCTGGAGAGATAATGCATTCAACC
CGGTATTGGATGATTTTTCACTCTGGGTTTATTGTGTATTGTCTATAATT
CATGGTGCTGGATTGACTTTTTACATTACCACGTATCTCAATATATTTGA
TAAAGGTACGGATCTTTGTTCATCACAAAGAGAATGTATATTACAGGCAT
GGAAGATCAATAATTCTTTAGATGATGGAGATTTACTGCTTTCTTTCGTT
TTGATTGCTCCCTTGCTTAATGTTACACTTATACTAGCAATCGAGAGGAA
ATTCCGACAACAAATTTTCTTATACTGTGTCTGGACTAGCGATGTTCTGT
CTGAATATTGTTGCAGATATCAGGGTCCTGAAAATCCAGAACAAGATCCG
CTATTACAGAATGGGGAGCACAATCCAAGATATATGGCTGAAGGAAATAT
TGAAGCTAATCAAAATAATGATCCACACGAGGATAGACATGAGAGAGGAA
TTGAACCAGCGAAGCGCCCTGATCAGCCAGATTTACGGCAGCCGAGGAAC
ATTTTGGTAGACAAGGTTATCCCAGTACAAGAAACGAATCAAAACTCACA
ATTATATTCTGAATGCCATAATCAACTAAATCATGATTATGTACAGGGTA
AACTCGAACCGACCACTTCAGAACACCCGCCCCTTACTGAAGAACACCCA
CCGCCCACTACAGAACACCCATCGCTTACTGC Coding sequence (CDS) from alignment at scaffold_348:158183..159164 >TCONS_00060750 ID=TCONS_00060750|Name=TCONS_00060750|organism=Clytia hemisphaerica|type=CDS|length=978bp|location=Sequence derived from alignment at scaffold_348:158183..159164 (Clytia hemisphaerica)
GGCTTTAATATGGCTCAATTATTACTAGTCCTCATATTTATAATCACCGA
TTACTACCTACACTACAAAACAGCCAACCAAAACTTACGAGGGGAGCTTT
ATATTTCTCTTGTCTGTAAAGGTTTTGTCTTCATCGTAATCAATACTATT
GTTGCGTTTTATTACCCGGAGAACATTATCACATCGTATTATGCTATCAT
ATTGAGCCCAATAACATTGGGTGGTCTTGTTATCTACATACTCGCTGTGA
AAAGCGCATGGAGGTTTTCCTGCTGCTGGAGAGATAATGCATTCAACCCG
GTATTGGATGATTTTTCACTCTGGGTTTATTGTGTATTGTCTATAATTCA
TGGTGCTGGATTGACTTTTTACATTACCACGTATCTCAATATATTTGATA
AAGGTACGGATCTTTGTTCATCACAAAGAGAATGTATATTACAGGCATGG
AAGATCAATAATTCTTTAGATGATGGAGATTTACTGCTTTCTTTCGTTTT
GATTGCTCCCTTGCTTAATGTTACACTTATACTAGCAATCGAGAGGAAAT
TCCGACAACAAATTTTCTTATACTGTGTCTGGACTAGCGATGTTCTGTCT
GAATATTGTTGCAGATATCAGGGTCCTGAAAATCCAGAACAAGATCCGCT
ATTACAGAATGGGGAGCACAATCCAAGATATATGGCTGAAGGAAATATTG
AAGCTAATCAAAATAATGATCCACACGAGGATAGACATGAGAGAGGAATT
GAACCAGCGAAGCGCCCTGATCAGCCAGATTTACGGCAGCCGAGGAACAT
TTTGGTAGACAAGGTTATCCCAGTACAAGAAACGAATCAAAACTCACAAT
TATATTCTGAATGCCATAATCAACTAAATCATGATTATGTACAGGGTAAA
CTCGAACCGACCACTTCAGAACACCCGCCCCTTACTGAAGAACACCCACC
GCCCACTACAGAACACCCATCGCTTACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060750-exon-scaffold_348-1491911889:158183..159164 | TCONS_00060750-exon-scaffold_348-1491911889:158183..159164 | Clytia hemisphaerica | exon |
| TCONS_00060750-exon-scaffold_348-1510915933:158183..159164 | TCONS_00060750-exon-scaffold_348-1510915933:158183..159164 | Clytia hemisphaerica | exon |
| TCONS_00060750-exon-scaffold_348-1575043694:158183..159164 | TCONS_00060750-exon-scaffold_348-1575043694:158183..159164 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_348 | supercontig | scaffold_348:158183..159164 . |
Blast
The following BLAST results are available for this feature:
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