TCONS_00060674 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060674
Unique NameTCONS_00060674
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1587

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060674 ID=TCONS_00060674|Name=TCONS_00060674|organism=Clytia hemisphaerica|type=transcript|length=1587bp
CAGATCTCGCTCACCCCATCTCCAAACTTGGAGCCAATGCCTTAGAAAAC
GGATGGCCTACTGATGTCAAAGTCGGTTTGATTGGCAGCTGTACTAACAG
CAGTTATGAAGATATGGGTCGATCTGCCAACTTGGCAAAACAAGCTCTTG
CACACGGTGTCAAAGCTAAGTCTATCTTCACCATTACACCAGGATCTGAA
CAGATCCGTGCCACCATCGAACGAGATGGTATTGCTGATACCCTCCGTGA
ATTCGGAGGTGTTGTTTTGGCCAACGCTTGTGGACCTTGTATCGGACAAT
GGGACAGACAAGATGTCCCAAAAGGCGAGAAGAACACTATCGTTTCCTCA
TACAACCGTAACTTTACTGGACGTAACGACGCTAACCCGATGACCCACGC
TTTCGTAACCTCCCCTGAAATGGTCACCGCCCTCTCCATCGCAGGTGACT
TGCGATTCAACCCATCTACCGATGACTTAGTGGGTGCCGATGGACAAAAA
TTCAAGCTGGAAAGCCCATTCGCTGACGAACTCCCCGTCAATGGATTCGA
CCCGGGCATGAACACATACCAAGCTCCCCCATCTGATGGAGGCTCCCTTA
AAGTTGACGTCGACCCTCAATCACAACGTCTACAATTGTTGACACCTTTC
AATACTTTTGACGGACAAGATTTGGTTGATATGCCCATCCTTATTAAGGC
TAAAGGTAAATGCACAACGGATCACATCAGTATGGCTGGACCATGGTTGA
AATACAGAGGTCACTTGGACAACATCTCTAACAATATGTTAATCGGAGCT
ATCAACGAAGAGAATGGCGAAGCTAACACCGTCAAGAATCAATTTACTGG
TGAATATGGAGCCGTGCCAGACACCGCTCGTCAATATAAGGCTCAAGGTA
TTGGATGGGTGGTCGTTGGAGACGAGAACTATGGAGAAGGAAGCAGTCGT
GAACACGCTGCTCTCGAACCAAGACATTTAGGAGGAAAAGCCATTATTGT
TAAATCCTTCGCCCGTATCCATGAAACGAACTTAAAGAAACAAGGAATGC
TTCCATTGACCTTCGAAACCGCTTCCGATTATGATAAAATCACACCCACA
GATCGCATCTCACTCCTCGGACTAAAGGATATCGCCCCCggaaaaccaat
taCATGTGAGATCACGCACGCTGACGGCGGCAAAGAACAAATCACATTAT
TGCACACAATGAACGAAGGCCAAATCGGGTGGTTCAAGTCCGGTTCTGCT
CTCAACAAAATGGCTGGCAAATAAgttcaaccaaaaaaaaaatcgcaaaa
aattaaagattttgatATATTGCGCACACGTCCGAATTTTTTATTAAATG
TTTATCTCACTGCTGCTGGCTGCGTTTTTATGTAATTTTATTTGGAGCCA
TTTTCTTCCACGCCACCTTATAGTTTTCTTTGTAAATGTCAGTTGTCAAA
AATTAAATGTCAGATAATatacaatattattatttttaactatctcaaat
tatttcaaattatttttctgtttCTACTAAGTTTATATTATTATAGAATT
TAGCTCTACCCACActtggtatagagcactttgtTTC
Run BLAST on NCBI

transcript from alignment at scaffold_348:123504..132289-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060674 ID=TCONS_00060674|Name=TCONS_00060674|organism=Clytia hemisphaerica|type=transcript|length=8786bp|location=Sequence derived from alignment at scaffold_348:123504..132289- (Clytia hemisphaerica)
CAGATCTCGCTCACCCCATCTCCAAACTTGGAGCCAATGCCTTAGAAAAC
GGATGGCCTACTGATGTCAAAGTCGGTATGTTATAAAAAAAATCTCTCTC
GATATTATTTGAAGAATTTGATTTGCTACATAATTTGTCTTGTTGGCACG
TAGCTTGCTAAAGATAAGCAATAAAGGAGTTCTTTTGATTGTTTTCTTTA
AAGCCTTTATTAAGTTTTTCAGAAGAAATAAAAATATATGGGACATAAGA
CGTTGGAGTTTAAAGACCAATACTACAATCATGGACGAAAATTGTGAGAC
AACCCTCCTTCCCTCCCTTCCCCCCCTTCCCCCCAGTGGCAATGTTGAAG
GGCATTGGAAAAGTCGGTGGGAAGGTCGTTCGCACTAAACANCTTTTTAT
CTATCGAAAGGCAATTACTCACGATTTATCTCGTGTTTGATTGCCTACCA
GGAGGTGTGTTTAGGGGTTACTTCTATGTGATGCTATCATGTTTCAAACA
AACGTAAAAAAATGTTATCAAAAATAACTTCGTTGTTCCTTCCGTTTGTG
TGGACTTTGTCCCCTTTTGTCCTAGAGGATTTACCTAAAATAGTGTTTAT
TCTAGTAAATAGATCTCTTACTGTAAAAAAAGAATGATTACATTTTACAG
TATATTTAAAGTGTTATTGATAACAAGCTTTTATAGTGAATTTACTAGGG
ATGTTTTTCTTTCACTTCTATTGGATGATATATTCAACGATCTCCCAATT
AAGTGACAGTGTTTACATTCTACATTTCGTTCTGCATTTTATCAAACATC
TGTAACTCGAGTAGAATAACATTTCAAGAGGTCATATAGTACATTACCAA
CATGCTAAAGCACGAGCACTTACACGTGGCTCATACAGCTTTCATGATAT
TAGCTCCCACAGGCTCCCTCAGACCACCAAAAGGGAAAGAACCTGATCTT
TTTATCATGATTCAAAGTATAACTATGCGAACTAAATCGCATTGTTTTCC
GCATACTTACTGCTATCATCCTAGATCATTTCGAAACACCTATATGTACT
ATATGTGTATTCACTGTAAAAAGTCTATACTTTTAATAAAAATTGTAAAA
CTTACTACATTTCAAGAGGGTACATGTCTCGTAAATTTAAATTCTAGCTA
GGTGATTTTGTTTCCTAATCTTCAGCCTCATTCTGCATATATCATCTCTC
GCTGTATTTACGATTTTCTTTAATGATTATCAATTAATACTTTTTAAAAA
GGATTGAATTATTTTCATGCCATTTCCTACCATTTATTTTAGTTGGAACC
ACACGTCAACGGACCTTTCACACCAGATCTCGCTCACCCCATCTCCAAAC
TTGGAGCCAATGCCTTAGAAAACGGATGGCCTACTGATGTCAAAGTCGGT
ATGTTATAAAAAAAATCTCTCTCGATATTATTTGAAGAATTTGATTTGCT
ACATAATTTGTCTTGTTGGCACGTAGCTTGCTAAAGATAAGCAATAANAT
CTCCCGTTATTATTGAAGAATTTGATTTGCTACATAATTTGTCTTGTTGG
CACTTAGCTAGCTAAAGATAAGCAATAAAGGAGTTCTTTTGATCGTTTGC
TTTAAAGCCTTTTTTAAGTTTTTCAGAAGAAATAAAAATATATGGGACAG
AAGACGTTGGAGTTTAGAGACCAATACTGATATGTTTAAACTCTTTTTTT
TCGTGTATGTTGTATATGAATTCTTCCGATTCTAGGTTTGATTGGCAGCT
GTACTAACAGCAGTTATGAAGATATGGGTCGATCTGCCAACTTGGCAAAA
CAAGCTCTTGCACACGGTGTCAAAGCTAAGTAAGCAGGGGGGAACTTTTG
CAAACTAGTGACTTTAATTGTCAAACATCCTCAGTGTGTGTGGATCCATA
GCTTCTCCTTTCCCACTTAAAAAGTGGTATTTCTTTTGTATGCGGAGTGA
TTCAAAATCGATCTACGCTGCGCAGGTCGAAAAAACCTTCAATGTTTGAT
ATTTGATAAGGATTCAGATGTTTAAAAGGTGCATATGACCCCCGTCACGA
GTGATACAAAAATACATTTTCAATTAATACGCTTTATTTGATCCATCAGG
TCTATCTTCACCATTACACCAGGATCTGAACAGATCCGTGCCACCATCGA
ACGAGATGGTATTGCTGATACCCTCCGTGAATTCGGAGGTGTTGTTTTGG
CCAACGCTTGTGGACCTTGTATCGGACAATGGGACAGGTACGGTGTCATA
ATTAGTGACTTCCTCATTGTAGTTAGTACACACTAACAGAAGGTCATTTT
TAAAGTTGGAAAATCAGCCATTCTTTTATCAGAAGGAACACAAAAATCGG
AAGTTGAGCACAAACGCCCCTGGAAATCTCACAATCTATCGCGAAATATT
TAAGCTTCTATACTTAAATGAATATTATGACTTTTCTCAGAAATATTTGA
GAAGGCAATTATCAACTAGCCCCCCTTTATTTAATTTTTTCCAATATCTT
TCTTTACTTGTAGACAAGATGTCCCAAAAGGCGAGAAGAACACTATCGTT
TCCTCATACAACCGTAACTTTACTGGACGTAACGACGCTAACCCGATGAC
CCACGCTTTCGTAACCTCCCCTGAAATGGTCACCGCCCTCTCCATCGCAG
GTACGTCAACTACCTTATCGGCCCTTTTTACGCCGGCCCTTATTGGCGTT
ATTTTTAGGCTCTTTGCATAAAAAGGGCCGATATGGTACTTAAGTTTTGA
AGAAAGCGATCAAGGGTTCTTAGTCCTCCTTTCTTCTTTAAAATTGTGCT
GTTAGCAAATGGGGGTACTATAACTTATGATAATTTTATAAATGTTTCTG
AAGAGTTCACAACTGAATAACAAAAAGTAGAGGAATGATGGTTTTTTTCC
ATTTTGTTTTCAATTCTTTTCCACAGGTGACTTGCGATTCAACCCATCTA
CCGATGACTTAGTGGGTGCCGATGGACAAAAATTCAAGCTGGAAAGCCCA
TTCGCTGACGAACTCCCCGTCAATGGATTCGACCCGGGCATGAACACATA
CCAAGCTCCCCCATCTGATGGAGGCTCCCTTAAAGTTGACGTCGACCCTC
AATCACAACGTCTACAATTGTTGACACCTTTCAATACTTTTGACGGACAA
GATTTGGTTGATATGCCCATCCTTATTAAGGTGCCTTCTGTGATTCTTTT
AATATCGAAACCCTTATGAACTTGCGGTTAGACCAGAAAGATGAAGAGCA
ACAACAACAACTGCAAAATCACTTCCCTCACAACTACATCAGTAGATAAA
GTGCATTCCCCTTGGTTTGCTTCAAGACGAACCACCTCTTTATTTTTCCA
CTTTTGGGTCGGAACAGTCATTGGATTAGATCACATTTCCCTCGAAGTAT
CAACGTTGGAAATCAACGTGACATGATCTTTTCTTCTTTCAGGCTAAAGG
TAAATGCACAACGGATCACATCAGTATGGCTGGACCATGGTTGAAATACA
GAGGTCACTTGGACAACATCTCTAACAATATGTTAATCGGGTGAGATGGT
TATTATCTCTTGTCTTATGAAAATATCTCAGGCAAAATGATTAAAATAGC
AAGTCTAACTAGGCATNTCACAAACGCCCCTGGAAATCTCACAATCTATC
GCGAAATATTTAAGCTTCTATACAGTATGTGGCCCCCAAAACGGCGATCA
AATTTGAAATTTCTCTCGAATCTAGAGGAAAAGATATTTTACAAAAATTT
TTGCTGCATGAAAACCTTTAACATCTCTACTTTATTTCCTGGAAGTTCTT
TTTCAAAATTTCCAATTTCAACAATATTTTTCAATCGCTTAAAGATAGGT
AGCTTTTTTCTAATGGCCCCCAAAACGGAGGTTTGAAATTTTAGCGATTT
CTCGAGCTTTAAGATATGAATACAAAATTTTGACCATAGTTTTGAAATAT
GATTTAGAGGGTTTTAGGCATAAATTTATTTGATAAAATTTTTACAGTAT
ACCCCTGGTTGTCAAAATGCAGGTTTGGGGCCCCCAGAACGGAGGTGTAG
TTAAAATCAAATTATTAGGCCCAGTGGTAATAGGGGGAAAAACTATGAAC
ATATTTGTGTTTCCCCTTAAATTTACGACCTGATGGATGTAAAATTTATG
ATTTTTATGAAATATTTCAAGATTTTCGATATTGCCAAGTCCAAACTGAA
AATTTAGAAATTTTCAAAATGACAATTTTGATTTAACAACGTCTTAATCA
AGTTTTTGAAAACAAATCTCTTTTGAAAATAGTTCCATTCATGTATGGAA
TAAGCTGTGAAAATTTTAGAAAAAAAGCTTAATTGAAACTGAAACTACTA
AGCTTTAAAGATATTTTGCTCCTATATTTTGCAAAAAAAATGACAGAATT
TGCCGTTTTTGCTGATTCAGCGAAATTTTTGATATATAATGTTATTTTTT
TGTTATAAACTATTAGCTCAAGGTGATAGGAATAGGATTCCAAGATTTTT
TGCTTTTTCTCATATTTAGAATTTTCAGTTTTGTCAATGCTGATTCTAGG
GCTCCAAAATACTGGTTGACCTTCAAAATGCTATATCTTTTACCCAGCCT
CTAAAGTCACAGATGTATCTGCATTTTCTGAACGGCATTAGGTGTAGAAA
GTTTCCTATACCCCGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNAATCATTCTTTCAAAATAAACAAAAATCGTTTAATTCTGATAAATC
TACAAGTCAGAATCTTCATTTTAATGAAAACCTCCGTTTTGGGGGCCGTC
TCCGTTTTGGGGGCCGTCTCCGTTTTGGGGGCCATATACTGTAATTAAAT
GAATATTATGACGTTTCCTCAGAAATATTTGAGAAGGCAATTATCAACTA
GCCCCCCTTTATTTAATTTTTTCCAATATCTTTCTTTACTTGTAGACAAG
ATGTCCCAAAAGGCGAGAAGAACACTATCGTTTCCTCATACAACCGTAAC
TTTACTGGACGTAACGACGCTAACCCGATGACCCACGCTTTCGTAACCTC
CCCTGAAATGGTCACCGCCCTCTCCATCGCAGGTACGTCAACTACCTTAT
CGGCCCTTTTTACGCCGGCCCTTATTGGCGTTATTTTTAGGCTCTTTGCA
TAAAAAGGGCCGATATGGTACTTAAGTTTTGAAGAAAGCGATCAAGGGTT
CTTAGTCCTCCTTTCTTCTTTAAAATTGTGCTGTTAGCAAATGGGGGTAC
TATAACTTATGATAATTTTATAAATGTTTCTGAAGAGTTCACAACTGAAT
AACAAAAAGTAGAGGAATGATGGTTTTTTTCCATTTTGTTTTCAATTCTT
TTCCACAGGTGACTTGCGATTCAACCCATCTACCGATGACTTAGTGGGTG
CCGATGGACAAAAATTCAAGCTGGAAAGCCCATTCGCTGACGAACTCCCC
GTCAATGGATTCGACCCGGGCATGAACACATACCAAGCTCCCCCATCTGA
TGGAGGCTCCCTTAAAGTTGACGTCGACCCTCAATCACAACGTCTACAAT
TGTTGACACCTTTCAATACTTTTGACGGACAAGATTTGGTTGATATGCCC
ATCCTTATTAAGGTGCCTTCTGTGATTCTTTTAATATCGAAACCCTTATG
AACTTGCGGTTAGACCAGAAAGATGAAGAGCAACAACAACAACTGCAAAA
TCACTTCCCTCACAACTACATCAGTAGATAAAGTGCATTCCCCTTGGTTT
GCTTCAAGACGAACCACCTCTTTATTTTTCCACTTTTGGGTCGGAACAGT
CATTGGATTAGATCACATTTCCCTCGAAGTATCAACGTTGGAAATCAACG
TGACATGATCTTTTCTTCTTTCAGGCTAAAGGTAAATGCACAACGGATCA
CATCAGTATGGCTGGACCATGGTTGAAATACAGAGGTCACTTGGACAACA
TCTCTAACAATATGTTAATCGGGTGAGATGGTTATTATCTCTTGTCTTAT
GAAAATATCTCAGGCAAAATGATTAAAATAGCAAGTCTAACTAGGCATAT
CTTCACATGTTCAAAACTTTCAACTTCTTGATGATTTCATACCTCAGCTG
GTTCAAGATCGTCATTCATTTGAAAATAAACATACTTCTTTTCTTACAGA
GCTATCAACGAAGAGAATGGCGAAGCTAACACCGTCAAGAATCAATTTAC
TGGTGAATATGGAGCCGTGCCAGACACCGCTCGTCAATATAAGGTGAAAG
ATAACAGCGTTATAGTGATTGATGATTTAATATCTTACGAATTCATATTC
TTTGTTTGAAATCGGAATTTGTGTTGTTTTAGATGACAGTGCTTTTGGAT
TTCCGATGCAATTTTGACCTATCCCCCTGCGCAAAAAAACAGTTTTCAAT
TTTCACAAATTCAATTTCAATTTAATGCAATATTTTCTCTTTGACACAGG
CTCAAGGTATTGGATGGGTGGTCGTTGGAGACGAGAACTATGGAGAAGGA
AGCAGTCGTGAACANGGAAATCAACGTGACATGATCTTTTCTTCTTTCAG
GCTAAAGGTAAATGCACGACGGATCACATCAGTATGGCTGGACCATGGTT
GAAATACAGAGGTCACTTGGACAACATCTCTAACAATATGTTAATCGGGT
GAGATGGTTATTATCTCTTGTCTTATGAAAATATCTCAGGCAAAATGATT
AAAATAGCAAGTCTAACTAGGCATATCTTCACATGTTCAAAACTTTCAAC
TTCTTGATGATTTCATACCTCAGCTGGTTCAAGATCGTCATTCATTTGAA
AATAAACATACTTCTTTTCTTACAGAGCTATCAACGAAGAGAATGGCGAA
GCTAACACCGTCAAGAATCAATTTACCGGTGAATATGGAGCCGTGCCAGA
CACCGCTCGTCAATATAAGGTGAAAGATAACAGCGTTATAGTGATTGATG
ATTTAATATCTTACGAATTCATATTCTTTGTTTGAAATCGGAATTTGTGT
TGTTTTAGATGACCGTGTTTTTGAATTTCCGACTTAATTTTGACCTATCC
CCCTGCGCAAAAAACAATGTTTTAACAGCCTATAAGGTTTCTGCGAGGCT
TCTTTCAATTTTCACAAATTCAATTATAATGCAGTTTAATGCAATATTTT
CTCTTTGACACAGGCTCAAGGTATTGGATGGGTGGTCGTTGGAGACGAGA
ACTATGGAGAAGGAAGCAGTCGTGAACACGCTGCTCTCGAACCAAGACAT
TTAGGAGGAAAAGCCATTATTGTTAAATCCTTCGCCCGTATCCATGGTGA
GTAAAGGATCGTACTTGCCCAAGGTCTCGCTTCATCTGATTAAATCATTA
TACCCTTTAAGTTTCTTTTTCTTGTCTAAGAACCCAAACTTTCAAAATGA
TCGTTGACTGAATTTGCCCATTAACTCAAATTAGAAATGTTAAAAAGCCT
CCAATAAAATCGTATTTTCTCTAATTTTCATCCAACTTCTTTCAGAGACG
GTCTGCTTGTTGATTCGACAATCTCTTTCCTCCCTTTCAGAAACGAACTT
AAAGAAACAAGGAATGCTTCCATTGACCTTCGAAACCGCTTCCGATTATG
ATAAAATCACACCCACAGATCGCATCTCACTCCTCGGACTAAAGGATATC
GCCCCCGGAAAAGTAATTATTTTTAATTATTGTTAATTTATTTTTGAAAT
TTCGTAAACCGAGGCTCAACATATGCTTAACCAACGCCTAAGTTTTTTGA
GAATTGAGCCTGGATATGCTTGTAAGCGTTATGCTTATAAAATGACATGA
ATGGAGAAATGATTGCCGAATTCAAGTGACGAGCGAGCTTTCGTTCTTTG
ATGATACGGTGAGACTCCATAACTCGAACCCGCATGAGGAACAGAAATTT
GTTCGAGTTAAGGAAATTTTGAGTTAGAGTAAGGTTTGTAACTGAAGGGG
CCATAAAACTAGACATTCAAGTTATAGAGGTTCGAGTTAAAGAGACTCCG
CTGTAACAAAATAGATTCCGTCGCATAACTTCTTATTTAATTGAATGAGA
TAAGACATGAAAGACTCTGGACAATAATTCAATTTTTTTTTCAGCCAATT
ACATGTGAGATCACGCACGCTGACGGCGGCAAAGAACAAATCACATTATT
GCACACAATGAACGAAGGCCAAATCGGGTGGTTCAAGTCCGGTTCTGCTC
TCAACAAAATGGCTGGCAAATAAGTTCAACCAAAAAAAAAATCGCAAAAA
ATTAAAGATTTTGATATATTGCGCACACGTCCGAATTTTTTATTAAATGT
TTATCTCACTGCTGCTGGCTGCGTTTTTATGTAATTTTATTTGGAGCCAT
TTTCTTCCACGCCACCTTATAGTTTTCTTTGTAAATGTCAGTTGTCAAAA
ATTAAATGTCAGATAATATACAATATTATTATTTTTAACTATCTCAAATT
ATTTCAAATTATTTTTCTGTTTCTACTAAGTTTATATTATTATAGAATTT
AGCTCTACCCACACTTGGTATAGAGCACTTTGTTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038152XLOC_038152Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060674-exon-scaffold_348-1575043694:132215..132289TCONS_00060674-exon-scaffold_348-1575043694:132215..132289Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1575043694:130461..130554TCONS_00060674-exon-scaffold_348-1575043694:130461..130554Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1575043694:130053..130190TCONS_00060674-exon-scaffold_348-1575043694:130053..130190Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1575043694:129640..129776TCONS_00060674-exon-scaffold_348-1575043694:129640..129776Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1575043694:129110..129363TCONS_00060674-exon-scaffold_348-1575043694:129110..129363Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1575043694:128750..128847TCONS_00060674-exon-scaffold_348-1575043694:128750..128847Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1575043694:125797..125890TCONS_00060674-exon-scaffold_348-1575043694:125797..125890Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1575043694:125527..125590TCONS_00060674-exon-scaffold_348-1575043694:125527..125590Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1575043694:124744..124812TCONS_00060674-exon-scaffold_348-1575043694:124744..124812Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1575043694:124378..124499TCONS_00060674-exon-scaffold_348-1575043694:124378..124499Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1575043694:123504..123945TCONS_00060674-exon-scaffold_348-1575043694:123504..123945Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1510915933:132215..132289TCONS_00060674-exon-scaffold_348-1510915933:132215..132289Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1510915933:130461..130554TCONS_00060674-exon-scaffold_348-1510915933:130461..130554Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1510915933:130053..130190TCONS_00060674-exon-scaffold_348-1510915933:130053..130190Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1510915933:129640..129776TCONS_00060674-exon-scaffold_348-1510915933:129640..129776Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1510915933:129110..129363TCONS_00060674-exon-scaffold_348-1510915933:129110..129363Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1510915933:128750..128847TCONS_00060674-exon-scaffold_348-1510915933:128750..128847Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1510915933:125797..125890TCONS_00060674-exon-scaffold_348-1510915933:125797..125890Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1510915933:125527..125590TCONS_00060674-exon-scaffold_348-1510915933:125527..125590Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1510915933:124744..124812TCONS_00060674-exon-scaffold_348-1510915933:124744..124812Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1510915933:124378..124499TCONS_00060674-exon-scaffold_348-1510915933:124378..124499Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1510915933:123504..123945TCONS_00060674-exon-scaffold_348-1510915933:123504..123945Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1491911889:132215..132289TCONS_00060674-exon-scaffold_348-1491911889:132215..132289Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1491911889:130461..130554TCONS_00060674-exon-scaffold_348-1491911889:130461..130554Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1491911889:130053..130190TCONS_00060674-exon-scaffold_348-1491911889:130053..130190Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1491911889:129640..129776TCONS_00060674-exon-scaffold_348-1491911889:129640..129776Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1491911889:129110..129363TCONS_00060674-exon-scaffold_348-1491911889:129110..129363Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1491911889:128750..128847TCONS_00060674-exon-scaffold_348-1491911889:128750..128847Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1491911889:125797..125890TCONS_00060674-exon-scaffold_348-1491911889:125797..125890Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1491911889:125527..125590TCONS_00060674-exon-scaffold_348-1491911889:125527..125590Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1491911889:124744..124812TCONS_00060674-exon-scaffold_348-1491911889:124744..124812Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1491911889:124378..124499TCONS_00060674-exon-scaffold_348-1491911889:124378..124499Clytia hemisphaericaexon
TCONS_00060674-exon-scaffold_348-1491911889:123504..123945TCONS_00060674-exon-scaffold_348-1491911889:123504..123945Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_348supercontigscaffold_348:123504..132289 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.2544e-06	7.76844e-07	3.32732e-08	0.000762181	0.322064	0.599553	0.874268	0.00588496	0	0	0	1.75111e-10	0	0	0	0	3.53026e-09	0	1.11718e-09	8.02593e-09	0	0	6.12385e-10	2.93089e-10	0.00267041	0.000749155	0	1.57893e-09	0	1.01648e-08
Blast
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BLAST of TCONS_00060674 vs. Swiss-Prot (Human)
Match: ACON (Aconitate hydratase, mitochondrial OS=Homo sapiens GN=ACO2 PE=1 SV=2)

HSP 1 Score: 653.67 bits (1685), Expect = 0.000e+0
Identity = 306/420 (72.86%), Postives = 352/420 (83.81%), Query Frame = 3 
Query:    3 DLAHPISKLGANALENGWPTDVKVGLIGSCTNSSYEDMGRSANLAKQALAHGVKAKSIFTITPGSEQIRATIERDGIADTLREFGGVVLANACGPCIGQWDRQDVPKGEKNTIVSSYNRNFTGRNDANPMTHAFVTSPEMVTALSIAGDLRFNPSTDDLVGADGQKFKLESPFADELPVNGFDPGMNTYQAPPSDGGSLKVDVDPQSQRLQLLTPFNTFDGQDLVDMPILIKAKGKCTTDHISMAGPWLKYRGHLDNISNNMLIGAINEENGEANTVKNQFTGEYGAVPDTARQYKAQGIGWVVVGDENYGEGSSREHAALEPRHLGGKAIIVKSFARIHETNLKKQGMLPLTFETASDYDKITPTDRISLLGLKDIAPGKPITCEITHADGGKEQITLLHTMNEGQIGWFKSGSALNKM 1262
            DLAHP++++G  A + GWP D++VGLIGSCTNSSYEDMGRSA +AKQALAHG+K KS FTITPGSEQIRATIERDG A  LR+ GG+VLANACGPCIGQWDR+D+ KGEKNTIV+SYNRNFTGRNDANP THAFVTSPE+VTAL+IAG L+FNP TD L G DG+KF+LE+P ADELP   FDPG +TYQ PP D     VDV P SQRLQLL PF+ +DG+DL D+ ILIK KGKCTTDHIS AGPWLK+RGHLDNISNN+LIGAIN ENG+AN+V+N  T E+G VPDTAR YK  GI WVV+GDENYGEGSSREHAALEPRHLGG+AII KSFARIHETNLKKQG+LPLTF   +DY+KI P D++++ GLKD  PGKP+ C I H +G +E I L HT NE QI WF++GSALN+M
Sbjct:  356 DLAHPVAEVGKVAEKEGWPLDIRVGLIGSCTNSSYEDMGRSAAVAKQALAHGLKCKSQFTITPGSEQIRATIERDGYAQILRDLGGIVLANACGPCIGQWDRKDIKKGEKNTIVTSYNRNFTGRNDANPETHAFVTSPEIVTALAIAGTLKFNPETDYLTGTDGKKFRLEAPDADELPKGEFDPGQDTYQHPPKDSSGQHVDVSPTSQRLQLLEPFDKWDGKDLEDLQILIKVKGKCTTDHISAAGPWLKFRGHLDNISNNLLIGAINIENGKANSVRNAVTQEFGPVPDTARYYKKHGIRWVVIGDENYGEGSSREHAALEPRHLGGRAIITKSFARIHETNLKKQGLLPLTFADPADYNKIHPVDKLTIQGLKDFTPGKPLKCIIKHPNGTQETILLNHTFNETQIEWFRAGSALNRM 775
The following BLAST results are available for this feature:
BLAST of TCONS_00060674 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACON0.000e+072.86Aconitate hydratase, mitochondrial OS=Homo sapiens... [more]
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