TCONS_00060624 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060624
Unique NameTCONS_00060624
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1495

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060624 ID=TCONS_00060624|Name=TCONS_00060624|organism=Clytia hemisphaerica|type=transcript|length=1495bp
ATATGAGCGGCGGAGAGTTTGAAAATCATTCCCATCTCTAGCATCTTGTG
GAGAAAAGGAATAAATAGAGCATAAGTGAAAAAGAAGTATTCTCTCTTGA
AAGCAATCATGAGAAGTTTGGCGATTCTTTTGGCCGTTACCATCATTGGT
CAATCTTACGCAGGTTATCTTGGGTGCTATAGGAAACCATGCGTCGCTGC
AAACACTGACCGATGTGAAAATAAACCATATGGACGATACCAATGTATCT
GCAAAGAGGGATTCTCTGGTCGCAGATGTGAAACAAaTGACGATGATTGC
CGAGGTGTCAAATGCTTAAACGGAGGAACCTGCGAAGACGGAATTGCTTC
TTTCACTTGCAAATGCAAGAACGGATTCAATGgaaaattctgtaaaaaca
acATCGATGATTGCCGAGGTGTCAAATGCTTAAACGGAGGAACCTGCGAA
GACGGAATCGATTCTTTCACTTGCAAATGTAAGAATGGATTCAATGgaaa
attctgtaaaaacaacATCGATGATTGCAAAGGTGTCAAATGCTTAAACG
GAGGAACCTGCGAAGACGGAATCGCTTCTTTCACTTGTCAATGCAAACGT
GGATTCAATGgaaaattctgtaaaaacaacATCGATGATTGCCGAGGTGT
CAAATGCTTAAACGGAGGAACCTGCGAAGACGGAATCGCTTCTTTCACTT
GTCAATGCAAACGTGGATTCAATGggaaattctgtaaaaacaacATCGAT
GATTGCCGAGGTGTCAAATGCTTAAACGGAGGAACCTGCGAAGACGGAAT
CGCTTCTTTCACTTGCAAATGCAAGAATGGATTCAATGgaaaattctgta
aaaacaacATCGATGATTGCAAGCGCGTCAGATGTCTTAATGGAGGAACC
TGCAAAGATGGGATTGCTTCTTTCACTTGTCAATGCAAGCCTGGATTCTC
CGGAAAATTCTgtcaagTTCCATCATGTCACCCTAACCCATGTCAGAatg
gtggaaaatgtttgaaacatGGAAACGCCATCAAATGTTGGTGTAAACAA
GGCTATGAAGGAAGATTCTGTGAAACAAGTGTCAAAGAATGCAATTACCA
CTGCAGCAGACAGCGTGGATGGTGCCGTATTATGGGAACCGACGGCCGTA
TTTATGACAACTATTGTCAATTCGAGCGTGCTCAATGCAAAAATAAATCA
CTTCAAATCAAGAAGAAACTCTGTGGTTACTGgtaaattttgtgaatatt
ttagACTAGTTCAATTCACAATGAAATTTCAATAATTCGTTAGAATTTGA
agcttttcagactttttttcaCTCTTTACGGAAAAAATTGTTCCTGGACC
TAATAGAATAAGATAAATCATTCCTTTTTTCTCTTTGGATCTTTTTAGTT
TGTTGTCCTTTTTTTGTTACTCGTtttataacttttacaaaatacTTTTG
ATGGACAAGAGAAGTTGTTACTTGTGacaaattcttaattttttt
Run BLAST on NCBI

transcript from alignment at scaffold_348:30162..34005+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060624 ID=TCONS_00060624|Name=TCONS_00060624|organism=Clytia hemisphaerica|type=transcript|length=3844bp|location=Sequence derived from alignment at scaffold_348:30162..34005+ (Clytia hemisphaerica)
ATATGAGCGGCGGAGAGTTTGAAAATCATTCCCATCTCTAGCATCTTGTG GAGAAAAGGAATAAATAGAGCATAAGTGAAAAAGAAGTATTCTCTCTTGA AAGGTAAGTGATTTGGACATTATTTCAATCTAATATTGATTTCATTATTT AAAGTGAATTTCATAATTGTCAAGTCAAATTCTCTTTCAGAAACAGGTTT TTTATAAGTCCAGCAATCCCTTATGAAGTTTCCATAACtctagaaaattt gatttttccagTTGAGGAGAAGAATCTCTTCACTGTATACTGCTTATCTT CTGgctctgaaaattcaaaaagaaaaggatttagcattttctcaactttt ttatTCAGCAATCATGAGAAGTTTGGCGATTCTTTTGGCCGTTACCATCA TTGGTCAATCTTACGCAGGTATTGTTTATTGTTGTTATtcaatcttattc aatttttatctcaattaaagggacataaaagtagcaaaatgtaaacattg cacgaaccacgtgtcattaaagagaacaattaaaaccacgggtccaaaac aaacttgtaaaacaattgaataatcaaaattagccatatttgctttgatt tttttattttgacatttgttttgattttgtatccgcagcatacagtttgt ttacaaatttcgcacgtactgttatgtccctttaaatattGCGAAAAATC CTCTCGCTGTTCTTGAGACCTTCTAGGTCCCATTGATATTTTTGGGGGGG TTTAGGGAGGTAATTcaaggaaatttttcaaaattattaaaacatCTGTA ATTTTCAATTGTCAAGACATTTGTTATCACTAAGGAAAATTTAATGTGTT AAACATTGTAAAACCTGGGAGAGCGGGGTCAAATCAGTGAATAACATTTC TTCCAACAACCAAGGGATCTTAAGATGTTATAGCTTCCATAGAAACAACT TTGTAAgatttttaacttaaaaaaatcgTGTATTCTAACGTAACTCCACA ATAAGATAACTCGAAAAATTAGCTATTTCATtacattttctttaatttca gGTTATCTTGGGTGCTATAGGAAACCATGCGTCGCTGCAAACACTGACCG ATGTGAAAATAAACCATATGGACGATACCAATGTATCTGCAAAGAGGGAT TCTCTGGTCGCAGATGTGAAACAAGTAAGTCATCTTTCTTTATGGATGAG CTGTGAAGTGTTTGAATTCTATGATACACATGAGATAAAAAGATTATTAT AGTTTATGTATCAGATGTCAAACAATTACGTCATTCCTTATTTacacaaa aattgtttttagctCTGGTTTCTAATTGTTATTGTGAATTATGAAGTGGG CAGAAAGTTTGCTAACTTTGTGTGCACTCTAATAATAAGAATAAATAGGT CAGAATGTCACCATGCATGCCAGTGTGATGAATATAAGAAGggatttcta tgtttttttcaaagaaatttaaaaccTTACGGCGAGTCTTTCAAAGGGGT CATCAGAcagtttgatattttttctggCCTGTAAAATCATTCCCACAATC CTGAACGAAAGCTCTGAATCCCGGGGGAGGATACTTAGACAAATGGAGGG TAGGGTATTTGGCACCCTTCACAATACCATaattggatttccaaagtccc ggtaagggtaggaaaaaacagaaaatcaaattgcagtcccactaagggta gaagaaataggaaaaattcaactttttacccccagaaagatagaaattta gtCAAAATTAGTCCCGGTAAGcctcgtaaaattcacaaaattttcgtTTG TCGAGGGTTGGGCATCATCCCCCCGTCAgttcgcaaccctagtacccccc ccccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNAGTCAATGTGTTAGACATGATGTT TTGCCTTATTGCCAATGTTTTTAAATGATTTAATACTttgggtttttttt tctgaaatagaTGACGATGATTGCCGAGGTGTCAAATGCTTAAACGGAGG AACCTGCGAAGACGGAATTGCTTCTTTCACTTGCAAATGCAAGAACGGAT TCAATGgaaaattctgtaaaaacaacATCGATGATTGCCGAGGTGTCAAA TGCTTAAACGGAGGAACCTGCGAAGACGGAATCGATTCTTTCACTTGCAA ATGTAAGAATGGATTCAATGgaaaattctgtaaaaacaacATCGATGATT GCAAAGGTGTCAAATGCTTAAACGGAGGAACCTGCGAAGACGGAATCGCT TCTTTCACTTGTCAATGCAAACGTGGATTCAATGgaaaattctgtaaaaa caacATCGATGATTGCCGAGGTGTCAAATGCTTAAACGGAGGAACCTGCG AAGACGGAATCGCTTCTTTCACTTGTCAATGCAAACGTGGATTCAATGgg aaattctgtaaaaacaacATCGATGATTGCCGAGGTGTCAAATGCTTAAA CGGAGGAACCTGCGAAGACGGAATCGCTTCTTTCACTTGCAAATGCAAGA ATGGATTCAATGgaaaattctgtaaaaacaacATCGATGATTGCAAGCGC GTCAGATGTCTTAATGGAGGAACCTGCAAAGATGGGATTGCTTCTTTCAC TTGTCAATGCAAGCCTGGATTCTCCGGAAAATTCTgtcaaggtttgtttt ttttcatttttttaccaatattttttgACTGCAAGTCATCTTTAAATAAT GAGTTACAAGTTTTGCTATCAACCATTGAATTTGCTTTTAATATTTTATG TACCAAGAGACCCGGATATTGTTTTATTTCCTATGCCACTATACAAATTC TTGTTGAAAGTTGTATTTCCCGAAATCAGTTCTCTTAAGTGATTTATTGC AATTTGCTTTTCTTCGACAGTTCCATCATGTCACCCTAACCCATGTCAGA atggtggaaaatgtttgaaacatGGAAACGCCATCAAATGTTGGTGTAAA CAAGGCTATGAAGGAAGATTCTGTGAAACAAGTGTCAAAGGTAacattta aaatattaaaagatcATTTTCCTTTCGATGATTAAAGTTGCAATTAAAAt acaacaattttatttttgaaaatttatcttaaaaaatcttatttgagaaa atgtcgaaattttttggaattttttttctttgctctTACAAAATCATTCG ATATCAACTATTTAGAGGCTGTATTAAAAATTACTTTACGAAGTACTGAT ATACATAATAAAGTTAACAAATCTTTCATTTGCCAGAATGCAATTACCAC TGCAGCAGACAGCGTGGATGGTGCCGTATTATGGGAACCGACGGCCGTAT TTATGACAACTATTGTCAATTCGAGCGTGCTCAATGCAAAAATAAATCAC TTCAAATCAAGAAGAAACTCTGTGGTTACTGgtaaattttgtgaatattt tagACTAGTTCAATTCACAATGAAATTTCAATAATTCGTTAGAATTTGAa gcttttcagactttttttcaCTCTTTACGGAAAAAATTGTTCCTGGACCT AATAGAATAAGATAAATCATTCCTTTTTTCTCTTTGGATCTTTTTAGTTT GTTGTCCTTTTTTTGTTACTCGTtttataacttttacaaaatacTTTTGA TGGACAAGAGAAGTTGTTACTTGTGacaaattcttaattttttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038132XLOC_038132Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060624-exon-scaffold_348-1491911889:30162..30264TCONS_00060624-exon-scaffold_348-1491911889:30162..30264Clytia hemisphaericaexon
TCONS_00060624-exon-scaffold_348-1510915933:30162..30264TCONS_00060624-exon-scaffold_348-1510915933:30162..30264Clytia hemisphaericaexon
TCONS_00060624-exon-scaffold_348-1575043694:30162..30264TCONS_00060624-exon-scaffold_348-1575043694:30162..30264Clytia hemisphaericaexon
TCONS_00060624-exon-scaffold_348-1491911889:30520..30579TCONS_00060624-exon-scaffold_348-1491911889:30520..30579Clytia hemisphaericaexon
TCONS_00060624-exon-scaffold_348-1510915933:30520..30579TCONS_00060624-exon-scaffold_348-1510915933:30520..30579Clytia hemisphaericaexon
TCONS_00060624-exon-scaffold_348-1575043694:30520..30579TCONS_00060624-exon-scaffold_348-1575043694:30520..30579Clytia hemisphaericaexon
TCONS_00060624-exon-scaffold_348-1491911889:31213..31335TCONS_00060624-exon-scaffold_348-1491911889:31213..31335Clytia hemisphaericaexon
TCONS_00060624-exon-scaffold_348-1510915933:31213..31335TCONS_00060624-exon-scaffold_348-1510915933:31213..31335Clytia hemisphaericaexon
TCONS_00060624-exon-scaffold_348-1575043694:31213..31335TCONS_00060624-exon-scaffold_348-1575043694:31213..31335Clytia hemisphaericaexon
TCONS_00060624-exon-scaffold_348-1491911889:32322..33002TCONS_00060624-exon-scaffold_348-1491911889:32322..33002Clytia hemisphaericaexon
TCONS_00060624-exon-scaffold_348-1510915933:32322..33002TCONS_00060624-exon-scaffold_348-1510915933:32322..33002Clytia hemisphaericaexon
TCONS_00060624-exon-scaffold_348-1575043694:32322..33002TCONS_00060624-exon-scaffold_348-1575043694:32322..33002Clytia hemisphaericaexon
TCONS_00060624-exon-scaffold_348-1491911889:33232..33351TCONS_00060624-exon-scaffold_348-1491911889:33232..33351Clytia hemisphaericaexon
TCONS_00060624-exon-scaffold_348-1510915933:33232..33351TCONS_00060624-exon-scaffold_348-1510915933:33232..33351Clytia hemisphaericaexon
TCONS_00060624-exon-scaffold_348-1575043694:33232..33351TCONS_00060624-exon-scaffold_348-1575043694:33232..33351Clytia hemisphaericaexon
TCONS_00060624-exon-scaffold_348-1491911889:33598..34005TCONS_00060624-exon-scaffold_348-1491911889:33598..34005Clytia hemisphaericaexon
TCONS_00060624-exon-scaffold_348-1510915933:33598..34005TCONS_00060624-exon-scaffold_348-1510915933:33598..34005Clytia hemisphaericaexon
TCONS_00060624-exon-scaffold_348-1575043694:33598..34005TCONS_00060624-exon-scaffold_348-1575043694:33598..34005Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_348supercontigscaffold_348:30162..34005 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.0828242 0 0 0 0 0 0 0 0 0 2.13304e-06 1.72309 873.763 250.232 2.14552e-05 0 0.32882 0.17309 0 0 0 0 0 0 0 0 0 0
Blast
BLAST of TCONS_00060624 vs. Swiss-Prot (Human)
Match: NOTC2 (Neurogenic locus notch homolog protein 2 OS=Homo sapiens GN=NOTCH2 PE=1 SV=3)

HSP 1 Score: 178.718 bits (452), Expect = 3.836e-47
Identity = 131/321 (40.81%), Postives = 184/321 (57.32%), Query Frame = 1
Query:  175 CYRKPCVAANTDRCENKPYGRYQCICKEGFSGRRCETNDDDCRGVKCLNGGTCEDGIASFTXXXXXXXXXXXXXXXIDDCRGVKCLNGGTCEDG--IDSFTXXXXXXXXXXXXXXXIDDCKGVKCLNGGTCEDGIASFTCQCKRGFNGKFCKNNIDDCRGVKCLNGGTCEDGIASFTCQCKRGFNGKFCKNNIDDCRGVKCLNGGTCEDGIASFTXXXXXXXXXXXXXXXIDDCKRVRCLNGGTCKDGIASFTCQCKPGFSGKFC--QVPSCHPNPCQNGGKCLKHGNAIKCWCKQGYEGRFCETSVKECNYHCSRQRGWC 1125
            C   PC   N   C+N   G Y+C CK+GF G  C+ N D+C    CLN GTC D I+ +TC C   + GK C+  +  C    C N   C++    +S+TC C  G+ G+ C  +ID+C    C+N G C +   S+ C+C  GF+G  C+ +IDDC    C NGG+C DG+ +F+C C  GF G  C+ ++++C    C NGGTC D + S+TCKC+ GF+G  C+NNI++C    C NGGTC DGI SF+C C  GF+G FC  ++  C  +PC N G C+      +C C  GY G+ C+T V  C+    + +G C
Sbjct:  761 CLSNPC--QNGGTCDNLVNG-YRCTCKKGFKGYNCQVNIDECASNPCLNQGTCFDDISGYTCHCVLPYTGKNCQTVLAPCSPNPCENAAVCKESPNFESYTCLCAPGWQGQRCTIDIDECISKPCMNHGLCHNTQGSYMCECPPGFSGMDCEEDIDDCLANPCQNGGSCMDGVNTFSCLCLPGFTGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCKCQAGFDGVHCENNINECTESSCFNGGTCVDGINSFSCLCPVGFTGSFCLHEINECSSHPCLNEGTCVDGLGTYRCSCPLGYTGKNCQTLVNLCSRSPCKNKGTC 1078          

HSP 2 Score: 162.155 bits (409), Expect = 1.000e-41
Identity = 125/318 (39.31%), Postives = 169/318 (53.14%), Query Frame = 1
Query:  175 CYRKPCVAANTDRCENKPYGRYQCICKEGFSGRRCETNDDDCRGVKCLNGGTCEDGIASFTXXXXXXXXXXXXXXXIDDCRGVKCLNGGTCEDGIDSFTXXXXXXXXXXXXXXXIDDCKGVKCLNGGTCEDGIASFTCQCKRGFNGKFCKNNIDDCRGVKCLNGGTCEDGIASFTCQCKRGFNGKFCKNNIDDCRGVKCLNGGTCEDGIASF-----TXXXXXXXXXXXXXXXIDDCKR-----VRCLNGGTCKDGIASFTCQCKPGFSGKFC--QVPSCHPNPCQNGGKCLKHGNAIKCWCKQGYEGRFCETSVKEC 1092
            C  KPC+  N   C N   G Y C C  GFSG  CE + DDC    C NGG+C DG+ +F+C C  GF G  C+ ++++C    C NGGTC D ++S+TCKC+ GF+G  C+NNI++C    C NGGTC DGI SF+C C  GF G FC + I++C    CLN GTC DG+ ++ C C  G+ GK C+  ++ C    C N GTC    A       +       +      +I   +R       C + G C +   +  CQC  G++G +C  Q+  C  NPCQ+G  C       +C C  GY+G  CE  V EC
Sbjct:  877 CISKPCM--NHGLCHNT-QGSYMCECPPGFSGMDCEEDIDDCLANPCQNGGSCMDGVNTFSCLCLPGFTGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCKCQAGFDGVHCENNINECTESSCFNGGTCVDGINSFSCLCPVGFTGSFCLHEINECSSHPCLNEGTCVDGLGTYRCSCPLGYTGKNCQTLVNLCSRSPCKNKGTCVQKKAESQCLCPSGWAGAYCDVPNVSCDIAASRRGVLVEHLCQHSGVCINAGNTHYCQCPLGYTGSYCEEQLDECASNPCQHGATCSDFIGGYRCECVPGYQGVNCEYEVDEC 1191          

HSP 3 Score: 154.066 bits (388), Expect = 3.691e-39
Identity = 108/290 (37.24%), Postives = 158/290 (54.48%), Query Frame = 1
Query:  235 RYQCICKEGFSGRRCETNDDDCRGVKCLNGGTCEDGIASFTXXXXXXXXXXXXXXXIDDCRGVKCLNGGTCEDGIDSFTXXXXXXXXXXXXXXXIDDCKGVKCLNGGTCEDGIASFTCQCKRGFNGKFCKNNIDDCRGVKCLNGGTCEDGIASFTCQCKRGFNGKFCKNNIDDCRGVKCLNGGTCEDG--IASFTXXXXXXXXXXXXXXXIDDCKRVRCLNGGTCKDGIASFTCQCKPGFSGKFCQ--VPSCHPNPCQNGGKCLKHGNAIKCWCKQGYEGRFCETSVKEC 1092
            RY C+C  GF+G+RC  + D+C    C  G TC +G+  F C C  G +   C + +++C    C++G  C  G+  + C C  G+ G  C+ + ++C    C NGGTC++ +  + C CK+GF G  C+ NID+C    CLN GTC D I+ +TC C   + GK C+  +  C    C N   C++     S+TC C  G+ G+ C  +ID+C    C+N G C +   S+ C+C PGFSG  C+  +  C  NPCQNGG C+   N   C C  G+ G  C+T + EC
Sbjct:  665 RYSCVCSPGFTGQRCNIDIDECASNPCRKGATCINGVNGFRCICPEGPHHPSCYSQVNECLSNPCIHG-NCTGGLSGYKCLCDAGWVGINCEVDKNECLSNPCQNGGTCDNLVNGYRCTCKKGFKGYNCQVNIDECASNPCLNQGTCFDDISGYTCHCVLPYTGKNCQTVLAPCSPNPCENAAVCKESPNFESYTCLCAPGWQGQRCTIDIDECISKPCMNHGLCHNTQGSYMCECPPGFSGMDCEEDIDDCLANPCQNGGSCMDGVNTFSCLCLPGFTGDKCQTDMNEC 953          

HSP 4 Score: 144.821 bits (364), Expect = 3.549e-36
Identity = 119/317 (37.54%), Postives = 164/317 (51.74%), Query Frame = 1
Query:  214 CENKPY-GRYQCICKEGFSGRRCETNDDDCRGV---KCLNGGTCEDGIASFTXXXXXXXXXXXXXXXIDDCRGVKCLNGGTCEDGIDSFTXXXXXXXXXXXXXXXIDDCKGVKCLNGGTCEDGIASFTCQCKRGFNGKFCKNNIDDCRGVKCLNGGTCEDGIASFTCQCKRGFNGKFCKNNIDDCRGVKCLNGGTCEDGIASFTXXXXXXXXXXXXXXXIDDCKRVRCLNGGTCKDGIASFTCQCKPGFSGKFCQV--PSCHPNPCQNGGKCLKHGNAIKCWCKQGYEGRFCETSVKECNYHCSRQRGWCRIMGTDG 1146
            C+  P  G+Y C C +G+ G  C  + D+C       C + G C +   +F C+C  G+ G  C+ +I++C    C N  TC D I  FTC C  GF G  C+  I++C+   C+N G C D +  F C C  GF G  C+ +IDDC    CLNG  C D    + CQC  GF G  C+ NID+C    C + G C+DGI S+TC C  G+ G  C + ID+C    CLN G C D +  + C C+PG SG  C++    C  NPC + G C+   N   C C  G+ G+ C   + EC  +  R+   C I G +G
Sbjct:  390 CDTNPLNGQYICTCPQGYKGADCTEDVDECAMANSNPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDKIGGFTCLCMPGFKGVHCELEINECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPNGYECQCATGFTGVLCEENIDNCDPDPC-HHGQCQDGIDSYTCICNPGYMGAICSDQIDECYSSPCLNDGRCIDLVNGYQCNCQPGTSGVNCEINFDDCASNPCIH-GICMDGINRYSCVCSPGFTGQRCNIDIDECASNPCRKGATC-INGVNG 703          

HSP 5 Score: 132.88 bits (333), Expect = 1.782e-32
Identity = 119/342 (34.80%), Postives = 170/342 (49.71%), Query Frame = 1
Query:  238 YQCICKEGFSGRRCETNDDDCRGVKCLNGGTCEDGIASFTXXXXXXXXXXXXXXXIDDCRGVKCLNGGTCEDGIDSFTXXXXXXXXXXXXXXXIDDC------KGVK----CLNGGTCEDGIASFTCQCKRGFNGKFCKNNIDDCRGVKCLNGGTCEDGIASFTCQCKRGFNGKFCKNNIDDCRGVKCLNGGTCEDGIASFTXXXXXXXXXXXXXXXIDDCKR-VRCLNGGTCKDGIASFTCQCKPGFSGKFCQ--VPSCHPNPCQNGGK--CLKHGNAIKCWCKQGYEGRFCETSVKECNYHCSRQRGWCRIMG--TDGRIYDNYCQFERAQCKNKSLQIK 1212
            + C+C  GF+G  C    ++C    CLN GTC DG+ ++ C C  G+ GK C+  ++ C    C N GTC        C C +G+ G +C      C      +GV     C + G C +   +  CQC  G+ G +C+  +D+C    C +G TC D I  + C+C  G+ G  C+  +D+C+   C NGGTC D +  F C C  G  G  C+ NIDDC R   CLNGG C D I  ++C+C PGF+G+ C+  +  C  NPC + G   C++  N   C C+  + GR CET V  C        G C +     DG I      F  A+C++   Q+K
Sbjct: 1009 FSCLCPVGFTGSFCLHEINECSSHPCLNEGTCVDGLGTYRCSCPLGYTGKNCQTLVNLCSRSPCKNKGTCVQKKAESQCLCPSGWAGAYCDVPNVSCDIAASRRGVLVEHLCQHSGVCINAGNTHYCQCPLGYTGSYCEEQLDECASNPCQHGATCSDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLCEENIDDCARGPHCLNGGQCMDRIGGYSCRCLPGFAGERCEGDINECLSNPCSSEGSLDCIQLTNDYLCVCRSAFTGRHCETFVDVCPQMPCLNGGTCAVASNMPDGFICRCPPGFSGARCQSSCGQVK 1350          

HSP 6 Score: 132.494 bits (332), Expect = 2.821e-32
Identity = 123/321 (38.32%), Postives = 172/321 (53.58%), Query Frame = 1
Query:  157 YAGYLGCY-RKPCVAANTDRCENKPYGRYQCICKEGFSGRRCETNDDDCRGVKCLNGGTCEDGIASFTXXXXXXXXXXXXXXXIDDCRGV-KCLNGGTCEDGIDSFTXXXXXXXXXXXXXXXIDDCKGVKCLNGGTC-EDGIASFTCQCKRGFNGKFCKNNIDDCRGVKCLNGGTCEDGIASFTCQCKRGFNGKFCKNNIDDC--RGVKCLNGGTCEDGIASFTXXXXXXXXXXXXXXXIDDCKRVRCLNGGTCKDGIASFTCQCKPGFSGKFCQV-PSCHPNPCQNGGKC---LKHGNAIKCWCKQGYEGRFCETSVKEC 1092
            Y+    C+  +PC+   T  C       Y+C C+ GF+G+ C+  D  C    C NG TC      F+CKC  GF G+ C+ ++++C     C +GGTC +   S+ C+C  GF G++C +    C    C+NGGTC + G  +F C C  GF G  C+ NIDDC   +C NGG C DG+ ++ C+C   + G+FC  ++D+C  +   C NGGTC +    + C C NG++G  C  NIDDC    C  G TC D +ASF+C C  G +G  C +  +C  NPC  G  C     +G  I C C QGY+G  C   V EC
Sbjct:  103 YSTSHPCFVSRPCLNGGT--CHMLSRDTYECTCQVGFTGKECQWTDA-CLSHPCANGSTCTTVANQFSCKCLTGFTGQKCETDVNECDIPGHCQHGGTCLNLPGSYQCQCPQGFTGQYCDSLYVPCAPSPCVNGGTCRQTGDFTFECNCLPGFEGSTCERNIDDCPNHRCQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTCANRNGGYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASFSCMCPEGKAGLLCHLDDACISNPCHKGALCDTNPLNGQYI-CTCPQGYKGADCTEDVDEC 419          

HSP 7 Score: 110.923 bits (276), Expect = 1.989e-25
Identity = 106/302 (35.10%), Postives = 153/302 (50.66%), Query Frame = 1
Query:  229 YGRYQCICKEGFSGRRCETNDDDCRGVKCLNGGTCEDGIASFTXXXXXXXXXXXXXXXIDDC------RGVK----CLNGGTCEDGIDSFTXXXXXXXXXXXXXXXIDDCKGVKCLNGGTCEDGIASFTCQCKRGFNGKFCKNNIDDCRGVKCLNGGTCEDGIASFTCQCKRGFNGKFCKNNIDDC-RGVKCLNGGTCEDGIASFTXXXXXXXXXXXXXXXIDDCKRVRCLNGGT--CKDGIASFTCQCKPGFSGKFCQ--VPSCHPNPCQNGGKCLKHGNA---IKCWCKQGYEGRFCETS 1080
             G Y+C C  G++G+ C+T  + C    C N GTC    A   C C +G+ G +C      C      RGV     C + G C +  ++  C+C  G+ G +C+  +D+C    C +G TC D I  + C+C  G+ G  C+  +D+C+   C NGGTC D +  F C C  G  G  C+ NIDDC RG  CLNGG C D I  ++C+C  GF G+ C+ +I++C    C + G+  C      + C C+  F+G+ C+  V  C   PC NGG C    N      C C  G+ G  C++S
Sbjct: 1044 LGTYRCSCPLGYTGKNCQTLVNLCSRSPCKNKGTCVQKKAESQCLCPSGWAGAYCDVPNVSCDIAASRRGVLVEHLCQHSGVCINAGNTHYCQCPLGYTGSYCEEQLDECASNPCQHGATCSDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLCEENIDDCARGPHCLNGGQCMDRIGGYSCRCLPGFAGERCEGDINECLSNPCSSEGSLDCIQLTNDYLCVCRSAFTGRHCETFVDVCPQMPCLNGGTCAVASNMPDGFICRCPPGFSGARCQSS 1345          

HSP 8 Score: 94.7449 bits (234), Expect = 3.279e-20
Identity = 92/262 (35.11%), Postives = 130/262 (49.62%), Query Frame = 1
Query:  232 GRYQCICKEGFSGRRCETNDDDCRGVKCLNGGTCEDGIASFTXXXXXXXXXXXXXXXIDDC-RGVKCLNGGTCEDGIDSFTXXXXXXXXXXXXXXXIDDCKGVKCLNGGT--CEDGIASFTCQCKRGFNGKFCKNNIDDCRGVKCLNGGTCEDGIAS-----FTCQCKRGFNGKFCKNNIDDCRGVKCLNGGTCEDGIASFTXXXXXXXXXXXXXXXIDDCKRVRCLNGGTCKDG--IASFTCQCKPGFSGKFCQVPSCHPN 987
            G Y+C C  G+ G  CE   D+C+   C NGGTC D +  F C C  G  G  C+ NIDDC RG  CLNGG C D I  ++C+C  GF G+ C+ +I++C    C + G+  C      + C C+  F G+ C+  +D C  + CLNGGTC   +AS     F C+C  GF+G  C+++   C  VKC  G  C                    ++    C    C +GG+C        ++CQC P FSG  C++ +  P+
Sbjct: 1169 GGYRCECVPGYQGVNCEYEVDECQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLCEENIDDCARGPHCLNGGQCMDRIGGYSCRCLPGFAGERCEGDINECLSNPCSSEGSLDCIQLTNDYLCVCRSAFTGRHCETFVDVCPQMPCLNGGTC--AVASNMPDGFICRCPPGFSGARCQSS---CGQVKCRKGEQC------VHTASGPRCFCPSPRDCESGCASSPCQHGGSCHPQRQPPYYSCQCAPPFSGSRCELYTAPPS 1419          

HSP 9 Score: 93.9745 bits (232), Expect = 5.063e-20
Identity = 79/204 (38.73%), Postives = 112/204 (54.90%), Query Frame = 1
Query:  520 DDCKGVKCLNGGTC--EDGIASFTCQCKRGFNGKFCKNNIDDCRGV--KCLNGGTCED-GIASFTCQCKRGFNGKFCKNNIDDCRGVKCLNGGTCEDGIASFTXXXXXXXXXXXXXXXIDDCKRV-RCLNGGTCKDGIASFTCQCKPGFSGKFCQ---VPSCHPNPCQNGGKCLKHGN-AIKCWCKQGYEGRFCETSVKECNYH 1101
            D C+  +C NGGTC  +  +   TC+C  GF G+ C+ +      V   CLNGGTC      ++ C C+ GF GK C+   D C    C NG TC      F+CKC  GF G+ C+ ++++C     C +GGTC +   S+ CQC  GF+G++C    VP C P+PC NGG C + G+   +C C  G+EG  CE ++ +C  H
Sbjct:   66 DPCEKNRCQNGGTCVAQAMLGKATCRCASGFTGEDCQYSTSHPCFVSRPCLNGGTCHMLSRDTYECTCQVGFTGKECQWT-DACLSHPCANGSTCTTVANQFSCKCLTGFTGQKCETDVNECDIPGHCQHGGTCLNLPGSYQCQCPQGFTGQYCDSLYVP-CAPSPCVNGGTCRQTGDFTFECNCLPGFEGSTCERNIDDCPNH 267          
The following BLAST results are available for this feature:
BLAST of TCONS_00060624 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NOTC23.836e-4740.81Neurogenic locus notch homolog protein 2 OS=Homo s... [more]
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