TCONS_00060581 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060581
Unique NameTCONS_00060581
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2118

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060581 ID=TCONS_00060581|Name=TCONS_00060581|organism=Clytia hemisphaerica|type=transcript|length=2118bp
TCAGAAATATGAAAATTACATAAAATGCACGACAAAGATCTGATTCTTCA
AAAGTATGAGGATGCTCAACTTCAttgtttcaaaacaaatgatttaGTAA
TTGAGGAGCAAATCAAACTACCTGGTCATTCATGGAACATATCAGCTGTT
CAATTCAACTCAAGTGGACTTCATCTTGCATCAGCTGGCTGGGATAAAAC
TATCTTAGTATGGGATTTAAAGACTTTGGAGGATCCAAAAGTGTTAGAGA
ATGGTCATCGAGAAACCATTACTTGTTTATCTTGGTTTCCACAAGTAGAT
TCAATGATGGTGTCTGGATCATCTGATCACTCTTTGGTTATTTGGAATGT
TGATAACAATGAAGCTATGGCGAAGTTGGTTGAACATGAGTCGTGGGTGT
TATCGATTTCATTTGACTCTGTTGGTAAACAAATGGCCTCGTCTTCATGG
AaaggtgacgtcatcatttgggaTATGATGACTATCAACCCTTTTGTACA
ACTAAAAGGACATGCAGAAGaatgacatgacatgacaatGAAACTATTAC
ACTGTGACATTTCAACGTTTTAACAAGATATGTCTGGTATTGTGCTTTAT
GTGTTGTGAGTATGGTGTTGTGCATTCAATGACTGCAATCCCAACTTATT
ATGTAGTGCAAGTGAAGATACGTCATTGAGATTGTGGGACTTGCGTAACG
ATAACCAGTGGCATTCAGATGTTATTTTATCAGGCCTGCATACGGATGGT
ATTAGATGTTGTTCGTGGTCACCTTGTGGGAATTATATCGCTGCTGGATC
ACGTGACTCAAAGGTATCAATATGGGATATCCGTTCTAACAAAGCTATCA
ACTGTCTGTATGGACATTCAAATATTGTGATGGGTACTTCCTATCTCTCT
TCATCTCTTTTGTTCACTGTCGGTGATACAAGATGCTGCTTATGGAATAC
TTTTGATCCGCAAGGGAAACCTATTTGTTCCTTACAACAACATACGTGGA
GCTATGAGGTGGAATGTTTGGCACTTTCACCTGATAGAACGCTCTTAGCA
ACTGGTAGTGTGGATAAACAAATCACTCTTTCTACAGTAGAAGTCTCTGA
TGAGTTTAGTCATGGTTTACACGATGACTCTAATGAACTCCCATACGCTA
AATTACCTGCTAAAACTGCTACGTCCATGCAAGAAGTCAAAAATGACAAA
TCATCGGCCGATTATCTGGACGATGCCGTATATTTAAACGTCGCGCGTGA
AAAGGAGGATGGGCTTCGCGTCGCTAAACAGACAATTCGAATTAAGGCTC
CTGTTACATCAGAGATTTTACAGAACAAGTTAAGCAATTTGAAAGTAGTT
GATAACAACGGTACTGAACACCAAAGAACGAATGCAGCCAAtctttttcg
acgtttatcaaTGCGAGCTGAGGGTGACTCGAAAGAAAATCCGAAATCTA
AAGAACTTGttgaagaaagaaagaaaaatggaccGCGTGTAAAACCATCA
ACGGCTAGTGTGAAGCGTCGCAAGCCGGCCAATAGTAAAACGCTAGACAA
TGGCTTTTTATCGGAATTAGAAGGCAAGTTTACAGTCAGTCCACCATCAA
GCAGCCATCTTGGGTACGATGATAATTTGAGTTGCCACAGCAACTCTGAC
GTcagtagtttctatagcaacgATGACGAATATTGTGATATTGAGGTTGT
GACGTCAGAAATGATTCGGTTGGCTACTGAAGAAGAAGCAcacaaaatgt
aaaaattatgGAAAAATTCATAAGAAGATTTTCGATATAAGATAGATGGT
GTGCCTTTTAAGGTCATTTTATAAGGTTTCTATCAATTTATAAGGATATA
ATTCAGGGGTTCCTCCCGATAGTTGCTCCTTTCTTTGGATTCCGAGATAA
ATTACTTTAGAACCTTTATGGAACCCCTGAAATAACATATACCATGGAAA
AGCTCTACAACTGATACAACAATTCGGGGTTTTGTTTCCCACATGGCATA
GGGGAAATACCAAAAATCGATATCCAGAATAACTTAACACTGCAACTttg
aaatgccttcacaatacactcttctcgaaaTGCATTAAATAATTGCGAAC
CTCGTCCTCAAAGACTAC
Run BLAST on NCBI

protein sequence of TCONS_00060581-protein

>TCONS_00060581-protein ID=TCONS_00060581-protein|Name=TCONS_00060581-protein|organism=Clytia hemisphaerica|type=polypeptide|length=290bp
MGTSYLSSSLLFTVGDTRCCLWNTFDPQGKPICSLQQHTWSYEVECLALS
PDRTLLATGSVDKQITLSTVEVSDEFSHGLHDDSNELPYAKLPAKTATSM
QEVKNDKSSADYLDDAVYLNVAREKEDGLRVAKQTIRIKAPVTSEILQNK
LSNLKVVDNNGTEHQRTNAANLFRRLSMRAEGDSKENPKSKELVEERKKN
GPRVKPSTASVKRRKPANSKTLDNGFLSELEGKFTVSPPSSSHLGYDDNL
SCHSNSDVSSFYSNDDEYCDIEVVTSEMIRLATEEEAHKM
Run BLAST on NCBI

transcript from alignment at scaffold_345:182037..190704+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060581 ID=TCONS_00060581|Name=TCONS_00060581|organism=Clytia hemisphaerica|type=transcript|length=8668bp|location=Sequence derived from alignment at scaffold_345:182037..190704+ (Clytia hemisphaerica)
TCAGAAATATGAAAATTACATAAAATGCACGACAAAGATCTGATTCTTCA
AAAGTATGAGGATGCTCAACTTCAttgtttcaaaacaaatgatttaGTAA
TTGAGGAGCAAATCAAACTACCTGGTCATTCATGGAACATATCAGCTGTT
CAATTCAACTCAAGTGGACTTCATCTTGCATCAGCTGGCTGGGATAAAAC
TATCTTAGTATGGGATTTAAAGACTTTGGAGGATCCAAAAGTGTTAGAGA
ATGGTCATCGAGAAACCATTACTTGTTTATCTTGGTTTCCACAAGTAGAT
TCAATGATGGTGTCTGGATCATCTGATCACTCTTTGGTTATTTGGAATGT
TGATAACAATGAAGCTATGGCGAAGTAAGTTATCAACAGCTGTATTTTCA
CCCTGTTTAGTTTGAATTTAAGGTTATCTTGCATTGTTTATGTGAAACTT
ATCTAAAGATTAACCAAGAATCGTAAAATAACTATTATATTGAGAGCTCA
TCTATTGATGGATCTTAGGATACTAGggttttttacgatttttttacTTA
GAATTGTattttattgattattttttagTTTGTCTTAGCCATGTGGGGTC
TACCAATGTTATGACAAAGTCTCGCTTTATTATAATGGTCTTGGACTTAG
ACTTTTCAGATTTGatgtatattaaaaaaaaaaacaataagatTTCTAAA
TATTTTAGGTTGGTTGAACATGAGTCGTGGGTGTTATCGATTTCATTTGA
CTCTGTTGGTAAACAAATGGCCTCGTCTTCATGGAaaggtgacgtcatca
tttgggaTATGATGACTATCAACCCTTTTGTACAACTAAAAGGACATGCA
GAAGGTAGGGCATTGTATCCAGGCTACTTGTTGAGTTAAGCTTTGTTTAC
TTCCACTCATTTTTGACCCAAAtagaatcaaaaaaataatctgcAAACTA
ATCAGGGAattacacactattgtaccattttatttggtttatcctactct
cctccaagtattatcccaacaaaaaaataatgcttagctaaaagccgtgg
cctctaatttaggctatttttctccatAAAATTGTATCCAGACAATCAAA
TCAACAGCGCATCATGGCTTCGCtaattggcaagtttagaaaaaaataaa
tttataagaacttggaaataatgacttctaaatgtttatctcctttagct
ccaatttgaactttttagtcgaggatgagtgggcgggggggtggggttgg
ttctttaggcaagaaagtgcatgtttAATCACTTAGAaaagctaaacttc
cagctggtttatttatttgttaagattatttctcatactcgctctgcaat
agaattattactttgctttctgatctgttctgattagtagtttgtgggca
acgttctaacacaactaactcaacaaactcatctttcacatcttttaatc
tcttttaagccggagcttccagcgcagctggtttattcactttcgtttac
tgttgaaaacataacaaagttttagctataCTTTTAAACCGCGTATAACT
GTcggttaagccaatcagctttcgggctgacatcagcatgtatttcagag
tataccatgaAAGTGCCACCAAatccgacccctactataagtatagcgct
atagcctttaagtgatgagattttagctccccccaattacataggtcccc
ccaaaaaagtggtgtactcccagccccctcctttttgggaaaaatttagg
gTGTACCCCAACTAGaaggggggctgacgctatgtttAGGGTAGTCTGGC
TTTCAAGTGTAATTTGAGTATATAAATAAGTAAGACTAAGAGGGTGtcct
ttttattgttaaaactttattaaaaaTGATTAATGAAGACTTGACAGATA
TTATTTCTTTACTTTTGACAgaatgacatgacatgacaatGAAACTATTA
CACTGTGACATTTCAACGTTTTAACAAGATATGTCTGGTATTGTGCTTTA
TGTGTTGTGTAAGAGAAATTCTTTCATCTACCACTTACAATGGATGACCT
TTATCACTCCTAGTAATGAGATCTTTTTTTCTCAGAGCGCtcgaattttg
aatatttcggTGTTCTTGTCGTAAAAGGTTTTCAGCTTTACCCTTTTTTC
GAATGTCGTGTTGACTTTCCTATTCTTTCTATAATATAAACCTATTTTCA
GTCACAGTGACATAATTTATGCAGTATAATTCGAATCtccataatttcaa
aaaatgttgcgtTCGAGATATAAGAAGATTCAGTTGCACTCACAGAGTGT
AAAAGTTTATCCCCTTttgcaatagaccttatcggagtttttgatttttc
taaaaaagcgatgcattgtgggattgtttcaagtgtattacaatagaatt
cccttgaGGAATTCATAAGAGATTTcgattgtaatacactcgaaacaatc
ccacaatgcatcgcttttttagaaaaatcaaaaactccgataaggtctaa
aCAGTGATAATTACACTTTTCCTCTTCCATTAGTTCTTGCTTATTTTCTA
CTGGTCTGAATTCGTCGCCTAGCACGCTAGACTAGACATATTTATAATGT
TTGTTAATTGTTCTCACAACATTACAGTCAAGTTTTTCTCCTGTTTTCCC
TTTTCTGCAGTAAACTTACAGAATCCAAAATAACCACAATTACGGCCTCC
CCAACTGTGTGTCTATCTACCTTTTAAATTGGTCAAACCTAGGTTTTTCG
TCGGATTTTACACACCAAATTAGCACATATATCCTGAAATTTTGGTGAGT
TATGCCGAATTTAGAGAAGAAGAAGCCTCTTTATATACTTCGCTGAGACG
GGAATCCCTTTGAGATGAAAGAACTTTTATCACTGCTTCTGTTATTATTT
TCAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNCCCTTttgcaatagaccttatcggagtttttgatttt
tctaaaaaagcgatgcattttgggattgtttcaagtgtattacaatagaa
ttcccttgaGGAATTCATAAGAGATTTcgattgtaatacactcgaaacaa
tcccacaatgcatcgcttttttagaaaaatcaaaaactccgataaggtct
aaaCAGTGATAATTACACTTTTCCTCTTCCATTAGTTCTTGCTTATTTTC
TACTGGTCTGAATTCGTCGCCTAGCACGCTAGACTAGACATATTTATAAT
GTTTGTTAATTGTTCTCACAACATTACAGTCAAGTTTTTCTCCTGTTTTC
CCTTTTCTGCAGTAAACTTACAGAATCCAAAATAACCACAATTACGGCCT
CCCCAACTGTGTGTCTATCTACCTTTTAAATTGGTCAAACCTAGGTTTTT
CGTCGGATTTTACACACCAAATTAGCACATATATCCTGAAATTTTGGTGA
GTTATGCCGAATTTAGAGAAGAAGAAGCCTCTTTATATACTTCGCTGAGA
CGGGAATCCCTTTGAGATGAAAGAACTTTAATCACTGCTTCTGTTATTAT
TTTCAGGAGTATGGTGTTGTGCATTCAATGACTGCAATCCCAACTTATTA
TGTAGTGCAAGTGAAGATACGTCATTGAGATTGTGGGACTTGCGTAACGA
TAACCAGTGGCATTCAGATGTTATTTTATCAGGCCTGCATACGGATGGTA
TTAGATGTTGTTCGTGGTCACCTTGTGGGAATTATATCGCTGCTGGATCA
CGTGACTCAAAGGTACCAAACATTTatacactcctgtctcacagccccgg
tgaaacctttttcccacagcgggatgaaaaaatttctattgagaTCTCAA
TGGGGAGGAAAACTCAattgttttggagtgcaatttctaaacaatgaatt
tcgaatggggatgaaatcaaagtcattttctTAGGGTatttctagggtat
ttttcccaccggggacgaaatttttgccaaattttccagcgggtctgtga
caaagGGGTGTATTTATCCTGATATAAGgtatagaaaatgaataaattAC
TTTTAATGTGTATTAAGCCATTTTTAACGCCCTGGACATGTATGAAGTGT
ATATTAGTAAGCTAGTTTTCTCTTCACCTCCATTTGTCCAAGGTAGATAa
actttttcctattttttgtaGTGAGTTCCTTTGCTAATAATTGAGGGACA
AGACTAATTTTTTTACGTAGAGTTTGGGAGTCTTTCCTCCGTAAAAAATG
GTATCATCATCAtatagttttatttttcttgcaaATCAACATATacatac
atttttttataagcataacatttataagtatatgcaggctcagtttttgg
tacccaAACAATggctaaaaaaaacatttaatgagAAATAATAGGGAACT
AAATTGCAGGTATGAAGGCAACCTGAAGCCATGCTTGAAGCTCTAAATCA
ACAATTGCCACCAATTTACTTTCGCTTATCTTGTATCAGGTATCAATATG
GGATATCCGTTCTAACAAAGCTATCAACTGTCTGTATGGACATTCAAATA
TTGTGATGGGTACTTCCTATCTCTCTTCATCTCTTTTGTTCACTGTCGGT
GATACAAGATGCTGCTTATGGAATACTTTTGATCCGCAAGGGAAACCTAT
TTGTTCCTTACAACAACATACGTGGAGCTATGAGGTAGGTTTATATATTG
TTCATTTGTTTTAGATTAaaagattgggcttttccagaaaaatttgaaca
tgggggtggaggatataaggTGTTTTGTGAAAATACCTTATGATCCACCG
GACAAAAGATCTTATCCCCCCCGGACAATCAAAATTACNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNtttgtaaaaattcggaattccagag
gggtatgatcctaaaattgcctggaattccaagggggtaggtcacaaaag
gttggacctcctcaacagggggtgctcggcttttttctggaaaagcccat
taatCATtcgcctaaatttatgcttttcATCATGAAGAGTTCTGTAGAAT
CAATATGAAGTTCCTTTTTACTATACTTACCTGTATCAAACACTTTTCTC
TGCTGAAAAAAACGATGCGTTCGGTCAGACACTACTCCGTGTCTAAGCTT
TTTTTCACAAGTCTCTTGCTGCCTCTGTGGTGTAGCGCATAGGCAACGAG
ACACAGAATTTCTCTAACCGATACCATCGAGATGTTGAAGCAGGCCGACA
CAAGACAATATCAAGTATGTAAGAATCGTCCATGGctagtttggtacagg
ctatgattatacatacttttgagatttttcagcCTTTTATTCCTTATCAT
TCTTCTTCCATTTTAGGTGGAATGTTTGGCACTTTCACCTGATAGAACGC
TCTTAGCAACTGGTAGTGTGGATAAACAAATCACTCTTTCTACAGTAGAA
GTCTCTGATGAGTTTAGTCATGGTTTACACGATGACTCTAATGAACTCCC
ATACGCTAAATTACCTGCTAAAACTGCTACGTCCATGCAAGAAGTCAAAA
GTAAgacatttaaaatttgaaacttgAAGGTATTTATCGTATTAATATCC
TCATTTCAATTTGATCATTAGGCTTTTTGATTAAACCGGTCgtctttaaa
attcaaatccTAGAAAGCTCTCTTCGAGATCTTCAGGTTGTCAGATTTTT
AGATACGGTTTGCTGTGAAATCTGCAAAATCGACAAGTATTTTAGAATTT
TGGCATATACTCAAGGTATGAAATTTGTTTCTAGAATGAAAATGTACTAA
ATAAAACCTTATCAAACCCATCATTTCAGATGACAAATCATCGGCCGATT
ATCTGGACGATGCCGTATATTTAAACGTCGCGCGTGAAAAGGAGGATGGG
CTTCGCGTCGCTAAACAGACAATTCGAATTAAGGCTCCTGTTACATCAGA
GATTTTACAGAACAAGTTAAGCAATTTGAAAGTAGTTGATAACAACGGTA
CTGAACACCAAAGAACGGTGagtttcgctttcgttttcaaactgTTGATT
TTCCTTATTCGAAGAAACAGTGCTAACATTCAGGATCACCGAGAGTTTAA
aggaatctttaacctttctcaagcaagaaaaagtgaaaccttaagATTTG
CGCTACATAAGGACAATCCTTATATATAGGGACGTCCTTAAATATAGAGT
ATAATGCCGTAATGCCTAAGAAACTTTAGTTCCAATCTGAATTTTGTCAA
TTAAAATTATCTACATAAATTTTTATCTAGAATGCAGCCAAtctttttcg
acgtttatcaaTGCGAGCTGAGGGTGACTCGAAAGAAAATCCGAAATCTA
AAGAACTTGttgaagaaagaaagaaaaatggaccGCGTGTAAAACCATCA
ACGGCTAGTGTGAAGCGTCGCAAGCCGGCCAATAGTAAAACGCTAGACAA
TGGCTTTTTATCGGAATTAGAAGGCAAGTTTACAGTCAGTCCACCATCAA
GCAGCCATCTTGGGTACGATGATAATTTGAGTTGCCACAGCAACTCTGAC
GTcagtagtttctatagcaacgATGACGAATATTGTGATATTGAGGTTGT
GACGTCAGAAATGATTCGGTTGGCTACTGAAGAAGAAGCAcacaaaatgt
aaaaattatgGAAAAATTCATAAGAAGATTTTCGATATAAGATAGATGGT
GTGCCTTTTAAGGTCATTTTATAAGGTTTCTATCAATTTATAAGGATATA
ATTCAGGGGTTCCTCCCGATAGTTGCTCCTTTCTTTGGATTCCGAGATAA
ATTACTTTAGAACCTTTATGGAACCCCTGAAATAACATATACCATGGAAA
AGCTCTACAACTGATACAACAATTCGGGGTTTTGTTTCCCACATGGCATA
GGGGAAATACCAAAAATCGATATCCAGAATAACTTAACACTGCAACTttg
aaatgccttcacaatacactcttctcgaaaTGCATTAAATAATTGCGAAC
CTCGTCCTCAAAGACTAC

Coding sequence (CDS) from alignment at scaffold_345:182037..190704+

>TCONS_00060581 ID=TCONS_00060581|Name=TCONS_00060581|organism=Clytia hemisphaerica|type=CDS|length=3492bp|location=Sequence derived from alignment at scaffold_345:182037..190704+ (Clytia hemisphaerica)
ATGGGTACTTCCTATCTCTCTTCATCTCTTTTGTTCACTGTCGGTGATAC
AAGATGCTGCTTATGGAATACTTTTGATCCGCAAGGGAAACCTATTTGTT
CCTTACAACAACATACGTGGAGCTATGAGGTGGAATGTTTGGCACTTTCA
CCTGATAGAACGCTCTTAGCAACTGGTAGTGTGGATAAACAAATCACTCT
TTCTACAGTAGAAGTCTCTGATGAGTTTAGTCATGGTTTACACGATGACT
CTAATGAACTCCCATACGCTAAATTACCTGCTAAAACTGCTACGTCCATG
CAAGAAGTCAAAAATGACAAATCATCGGCCGATTATCTGGACGATGCCGT
ATATTTAAACGTCGCGCGTGAAAAGGAGGATGGGCTTCGCGTCGCTAAAC
AGACAATTCGAATTAAGGCTCCTGTTACATCAGAGATTTTACAGAACAAG
TTAAGCAATTTGAAAGTAGTTGATAACAACGGTACTGAACACCAAAGAAC
GAATGCAGCCAAtctttttcgacgtttatcaaTGCGAGCTGAGGGTGACT
CGAAAGAAAATCCGAAATCTAAAGAACTTGttgaagaaagaaagaaaaat
ggaccGCGTGTAAAACCATCAACGGCTAGTGTGAAGCGTCGCAAGCCGGC
CAATAGTAAAACGCTAGACAATGGCTTTTTATCGGAATTAGAAGGCAAGT
TTACAGTCAGTCCACCATCAAGCAGCCATCTTGGGTACGATGATAATTTG
AGTTGCCACAGCAACTCTGACGTcagtagtttctatagcaacgATGACGA
ATATTGTGATATTGAGGTTGTGACGTCAGAAATGATTCGGTTGGCTACTG
AAGAAGAAGCAcacaaaatgtaaATGGGTACTTCCTATCTCTCTTCATCT
CTTTTGTTCACTGTCGGTGATACAAGATGCTGCTTATGGAATACTTTTGA
TCCGCAAGGGAAACCTATTTGTTCCTTACAACAACATACGTGGAGCTATG
AGGTGGAATGTTTGGCACTTTCACCTGATAGAACGCTCTTAGCAACTGGT
AGTGTGGATAAACAAATCACTCTTTCTACAGTAGAAGTCTCTGATGAGTT
TAGTCATGGTTTACACGATGACTCTAATGAACTCCCATACGCTAAATTAC
CTGCTAAAACTGCTACGTCCATGCAAGAAGTCAAAAATGACAAATCATCG
GCCGATTATCTGGACGATGCCGTATATTTAAACGTCGCGCGTGAAAAGGA
GGATGGGCTTCGCGTCGCTAAACAGACAATTCGAATTAAGGCTCCTGTTA
CATCAGAGATTTTACAGAACAAGTTAAGCAATTTGAAAGTAGTTGATAAC
AACGGTACTGAACACCAAAGAACGAATGCAGCCAAtctttttcgacgttt
atcaaTGCGAGCTGAGGGTGACTCGAAAGAAAATCCGAAATCTAAAGAAC
TTGttgaagaaagaaagaaaaatggaccGCGTGTAAAACCATCAACGGCT
AGTGTGAAGCGTCGCAAGCCGGCCAATAGTAAAACGCTAGACAATGGCTT
TTTATCGGAATTAGAAGGCAAGTTTACAGTCAGTCCACCATCAAGCAGCC
ATCTTGGGTACGATGATAATTTGAGTTGCCACAGCAACTCTGACGTcagt
agtttctatagcaacgATGACGAATATTGTGATATTGAGGTTGTGACGTC
AGAAATGATTCGGTTGGCTACTGAAGAAGAAGCAcacaaaatgtaaATGG
GTACTTCCTATCTCTCTTCATCTCTTTTGTTCACTGTCGGTGATACAAGA
TGCTGCTTATGGAATACTTTTGATCCGCAAGGGAAACCTATTTGTTCCTT
ACAACAACATACGTGGAGCTATGAGGTGGAATGTTTGGCACTTTCACCTG
ATAGAACGCTCTTAGCAACTGGTAGTGTGGATAAACAAATCACTCTTTCT
ACAGTAGAAGTCTCTGATGAGTTTAGTCATGGTTTACACGATGACTCTAA
TGAACTCCCATACGCTAAATTACCTGCTAAAACTGCTACGTCCATGCAAG
AAGTCAAAAATGACAAATCATCGGCCGATTATCTGGACGATGCCGTATAT
TTAAACGTCGCGCGTGAAAAGGAGGATGGGCTTCGCGTCGCTAAACAGAC
AATTCGAATTAAGGCTCCTGTTACATCAGAGATTTTACAGAACAAGTTAA
GCAATTTGAAAGTAGTTGATAACAACGGTACTGAACACCAAAGAACGAAT
GCAGCCAAtctttttcgacgtttatcaaTGCGAGCTGAGGGTGACTCGAA
AGAAAATCCGAAATCTAAAGAACTTGttgaagaaagaaagaaaaatggac
cGCGTGTAAAACCATCAACGGCTAGTGTGAAGCGTCGCAAGCCGGCCAAT
AGTAAAACGCTAGACAATGGCTTTTTATCGGAATTAGAAGGCAAGTTTAC
AGTCAGTCCACCATCAAGCAGCCATCTTGGGTACGATGATAATTTGAGTT
GCCACAGCAACTCTGACGTcagtagtttctatagcaacgATGACGAATAT
TGTGATATTGAGGTTGTGACGTCAGAAATGATTCGGTTGGCTACTGAAGA
AGAAGCAcacaaaatgtaaATGGGTACTTCCTATCTCTCTTCATCTCTTT
TGTTCACTGTCGGTGATACAAGATGCTGCTTATGGAATACTTTTGATCCG
CAAGGGAAACCTATTTGTTCCTTACAACAACATACGTGGAGCTATGAGGT
GGAATGTTTGGCACTTTCACCTGATAGAACGCTCTTAGCAACTGGTAGTG
TGGATAAACAAATCACTCTTTCTACAGTAGAAGTCTCTGATGAGTTTAGT
CATGGTTTACACGATGACTCTAATGAACTCCCATACGCTAAATTACCTGC
TAAAACTGCTACGTCCATGCAAGAAGTCAAAAATGACAAATCATCGGCCG
ATTATCTGGACGATGCCGTATATTTAAACGTCGCGCGTGAAAAGGAGGAT
GGGCTTCGCGTCGCTAAACAGACAATTCGAATTAAGGCTCCTGTTACATC
AGAGATTTTACAGAACAAGTTAAGCAATTTGAAAGTAGTTGATAACAACG
GTACTGAACACCAAAGAACGAATGCAGCCAAtctttttcgacgtttatca
aTGCGAGCTGAGGGTGACTCGAAAGAAAATCCGAAATCTAAAGAACTTGt
tgaagaaagaaagaaaaatggaccGCGTGTAAAACCATCAACGGCTAGTG
TGAAGCGTCGCAAGCCGGCCAATAGTAAAACGCTAGACAATGGCTTTTTA
TCGGAATTAGAAGGCAAGTTTACAGTCAGTCCACCATCAAGCAGCCATCT
TGGGTACGATGATAATTTGAGTTGCCACAGCAACTCTGACGTcagtagtt
tctatagcaacgATGACGAATATTGTGATATTGAGGTTGTGACGTCAGAA
ATGATTCGGTTGGCTACTGAAGAAGAAGCAcacaaaatgtaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038106XLOC_038106Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060581-exon-scaffold_345-1491911889:182037..182410TCONS_00060581-exon-scaffold_345-1491911889:182037..182410Clytia hemisphaericaexon
TCONS_00060581-exon-scaffold_345-1510915933:182037..182410TCONS_00060581-exon-scaffold_345-1510915933:182037..182410Clytia hemisphaericaexon
TCONS_00060581-exon-scaffold_345-1575043694:182037..182410TCONS_00060581-exon-scaffold_345-1575043694:182037..182410Clytia hemisphaericaexon
TCONS_00060581-exon-scaffold_345-1491911889:182745..182890TCONS_00060581-exon-scaffold_345-1491911889:182745..182890Clytia hemisphaericaexon
TCONS_00060581-exon-scaffold_345-1510915933:182745..182890TCONS_00060581-exon-scaffold_345-1510915933:182745..182890Clytia hemisphaericaexon
TCONS_00060581-exon-scaffold_345-1575043694:182745..182890TCONS_00060581-exon-scaffold_345-1575043694:182745..182890Clytia hemisphaericaexon
TCONS_00060581-exon-scaffold_345-1491911889:183958..184044TCONS_00060581-exon-scaffold_345-1491911889:183958..184044Clytia hemisphaericaexon
TCONS_00060581-exon-scaffold_345-1510915933:183958..184044TCONS_00060581-exon-scaffold_345-1510915933:183958..184044Clytia hemisphaericaexon
TCONS_00060581-exon-scaffold_345-1575043694:183958..184044TCONS_00060581-exon-scaffold_345-1575043694:183958..184044Clytia hemisphaericaexon
TCONS_00060581-exon-scaffold_345-1491911889:186893..187098TCONS_00060581-exon-scaffold_345-1491911889:186893..187098Clytia hemisphaericaexon
TCONS_00060581-exon-scaffold_345-1510915933:186893..187098TCONS_00060581-exon-scaffold_345-1510915933:186893..187098Clytia hemisphaericaexon
TCONS_00060581-exon-scaffold_345-1575043694:186893..187098TCONS_00060581-exon-scaffold_345-1575043694:186893..187098Clytia hemisphaericaexon
TCONS_00060581-exon-scaffold_345-1491911889:187826..188020TCONS_00060581-exon-scaffold_345-1491911889:187826..188020Clytia hemisphaericaexon
TCONS_00060581-exon-scaffold_345-1510915933:187826..188020TCONS_00060581-exon-scaffold_345-1510915933:187826..188020Clytia hemisphaericaexon
TCONS_00060581-exon-scaffold_345-1575043694:187826..188020TCONS_00060581-exon-scaffold_345-1575043694:187826..188020Clytia hemisphaericaexon
TCONS_00060581-exon-scaffold_345-1491911889:189053..189236TCONS_00060581-exon-scaffold_345-1491911889:189053..189236Clytia hemisphaericaexon
TCONS_00060581-exon-scaffold_345-1510915933:189053..189236TCONS_00060581-exon-scaffold_345-1510915933:189053..189236Clytia hemisphaericaexon
TCONS_00060581-exon-scaffold_345-1575043694:189053..189236TCONS_00060581-exon-scaffold_345-1575043694:189053..189236Clytia hemisphaericaexon
TCONS_00060581-exon-scaffold_345-1491911889:189516..189703TCONS_00060581-exon-scaffold_345-1491911889:189516..189703Clytia hemisphaericaexon
TCONS_00060581-exon-scaffold_345-1510915933:189516..189703TCONS_00060581-exon-scaffold_345-1510915933:189516..189703Clytia hemisphaericaexon
TCONS_00060581-exon-scaffold_345-1575043694:189516..189703TCONS_00060581-exon-scaffold_345-1575043694:189516..189703Clytia hemisphaericaexon
TCONS_00060581-exon-scaffold_345-1491911889:189967..190704TCONS_00060581-exon-scaffold_345-1491911889:189967..190704Clytia hemisphaericaexon
TCONS_00060581-exon-scaffold_345-1510915933:189967..190704TCONS_00060581-exon-scaffold_345-1510915933:189967..190704Clytia hemisphaericaexon
TCONS_00060581-exon-scaffold_345-1575043694:189967..190704TCONS_00060581-exon-scaffold_345-1575043694:189967..190704Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060581-proteinTCONS_00060581-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_345supercontigscaffold_345:182037..190704 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.89134	1.66361	1.01003	0.494078	1.59198	0.669834	2.75739	2.03149	4.1699	1.21616	2.7711	1.53245	1.19228	0.398857	0.636648	0.971811	0.835885	2.18101	0	1.43079	0.495301	0.926109	2.89415	4.71279	0.507128	0.892259	0.448713	0.860314	2.8518	2.23717
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060581 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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