TCONS_00060512 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060512
Unique NameTCONS_00060512
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3426

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060512 ID=TCONS_00060512|Name=TCONS_00060512|organism=Clytia hemisphaerica|type=transcript|length=3426bp
TAGatgtttttagaattatttAATCAGAAAAGATTGACATATGAAGaatg
aaacaaagaaaagatcCAGTCAAATTGATGGTTGGAAAATGAAGCATGGA
AAGCAAAATACAGACCAACCAGAGATGAATGATCCTGGATTTACTGACAG
tgTTTTTCAAGACAAagtagcaaaattttcaaaattgttgtgTGAAGCTG
GCACCAGAGAGATCAAAACAAACGAAGAGACATTGTTAAACATCAAAGCA
TTTAACAACATTGAAGATCCTCCAATATGTTTGGAGCAGTTCATGCAATG
TCCTTCAAATTTTCGGaaacaaacattttttgagaatttgaaaatcaaca
aTGTCATCATTGGAAAGTTAGCTGTATGTTCTGCCAGTGGATGGACCGTT
AAACTGCTAGGCGTCATGGAAGGTCAGAAAAGATGGATAAAAGATTTGCA
AATCACGGCACGATTGGTGATCACAAagtcttatgatgatgatgttgATG
AAGATTATGAAGTTGGAGATCTTGTCAAAGCGCTTGTGGAGAAAGTTGAT
GTACAATCCAAAGATATATGGTTGACACTGGAACCCTCTGTTGCTGCCAA
ATCCCAATACCAATTGCCTAAGCTGGGCAAAATTCAGGACCCAGATACCG
TTGAGTATCTTTTGGAAAGCCGTgaatttgatgaagaaaatgACTCAGCA
TATTTGGAACACATACGCGATAGTTCACTTTTCAATCATCCACACGGTGT
TTCATTACTGGCAAGTCATTTTAATGTCAACCAAGACCATCATGGGTTTG
TTGTATGTAACACGCTTAAGATTAAAGAAACGGCTCTTGAGCTTCGAGAG
AAACAAATGCTTGATTGGTCAATGAGCATGGTTGGGATTGGTGTGAAACA
TTTTCGTGAGAAGAATTTGAAGGAAGCAAAGAAATGTTTGGATAAAGCTC
TCAGCTTTTATCCGAAGAATGTTGAAGGTTTTGTGGCAAGAGGAGCATTG
AAAGCTAATCAAAGTGATTTGAAGGGAGCGATTGATGATTTTCGTAAAGC
GTTAGAAGTCAATCCACATCATCGCAATGGGAAGAAGTACTTGATTGAAA
CTTCACTCTCCTTAGCACGAAGTCACGAGAAAGAGAAGCGTTGGAAAGAA
AGTTCAAAGTGTTATCACGAGATTATGAAACATGATCCAGATCATAAAGA
AGCAAAAGAAAGATATCATCAAATTCATCAAATACTGTCTTCTAAGGTAA
CCGCTATCCATATCTTAATGGTGTCACGTGACTTAATTCTGTATGtcaag
tttgttttgttttggtattAGGCGCTATCAAGCAACCAATTTCTCCAACC
TAATCTAGATTTGGAATCTAGGAAAatgttgagaaaaaaaatagtgCTTC
ATTGTGcctttgtttcattttttttgtaattctaaCATTTCTTTTCTGAT
AGTTCACACCCCTCTTATTCTGACAGAAATCTATTTTGTCGAAATTCCAA
GTATTTAAACATTTATAATTTATAAGACAGGAAACAGAAACTTTTACCAT
ATTTTCCACAATTTTTTAAAAGCTCTTTCGTGATCTTTGAAGACAGTAGT
ACCCACAAGGTACTAACtgcaaattccaaaaatgaaatatgacccaccac
ggtactaaccgtcATGATGTCTGGTACCAACTGCATGACCCCTCCCCCtg
gaaaaaatgttaaatgcCAAACAGCTCTAGAATGGTTGGAGACGTTTAAC
TAAACGTATTTGCTATTCTTCTTCTCTTTTCATAAATCCTTGGCTTGTAT
TCTGTTTCATCTCCAACAAATCATTTGATATCTTTAACTCCATCAAACTT
CTATATCAATACAATTTGCAACTGGATGATTGGTGACCTCATTGGAATTG
CTGTAATGTACAATGTTATCATTTCTCTATTTTAATTGATATTTTACTGC
AAACgatttcaaacttttattggacCTTTTTACTCATCATTTGACAAATG
AATTGCTATTTTTTGCTTGTATTTTGATAATGATCTAATCCCTAACTTTT
TAAACATTGTCAACTCTATCCATTAACTATATCCAACTGTGTGAAATATG
TGGTATTATGTTCATCACATAATGTTCAATCCAATCAAACAATGACGTCA
CATCCTTTATTATTTCCACTGGAACCCAAACTAAATCTACGCtatatata
caaaaatttggTTCCACCATGCATTATCGCCACACTTATTACTTATTTTC
TGTAAAACGTGGAGATTATAAGCGGTCGAGAAGCAGCGAAAAATGAAGAG
ACAAGTTCCCATCGTCGTAACAGTGCAAGTAGCAAGACGAAGGATCGTAT
CGAACAGTTGAAACGTTTGCTACAAGAAGATACAAACAAAAATTCCTCAA
GCTCTTCTTCAACTTCTTCTTCATCCTCTTCGTCATcggaaagtgaaagt
gaaagtaattcATCATCGGGCGAGGACTGGATCGAGAAAACAAACTCAAA
GTCAAGAAAAAGAGTATCTGATCGCAAACGTAGGAGTCATCACAAACATT
ATTCATCAAAATCGAGAAAGAATCGTAAACGGTCGAGAAAATCTTCGAGT
CAATCTCCAGAGAGACATTCTCGCAAGAACCTATACGAGACTTCAGAAAC
AAGTCGTAAAGAAAGAGATTTTAAGTCAACTCACGAGCCTGGTGGAGCTT
CAAATTTGTTAGACAATAATGCTTTAGATAAGGATGCGAAACAGATTTTA
CGAAAACTTAAAGACTTTTCTTCCGAGGAAATCGATATTGTTAAGAAAAT
GTTACGGAAAAACGAATCGGCAGAAAATACTTCGAAGGATGATcgaaaag
ttgaagaaaaatcGAAGGGCTATCGAGAAAGTAGACATTCACCGAGAAAT
TACCGTGATACTGAAAAATCAACAAGAGATTATCGATCTTCTTTGTATTC
TAGTCGAAATCGAGACGATTTGAGGAGAAACGAAGATCGATATGATCGAA
AAGATGACTACAGACATTCCAAACGAGAGAAATATTCGAAACAATCGAGC
TATGATCAAAGGGATTAATCATTCTTTAGGACATTTTCTTTTATAGCGTA
ATTTTTCATACACAAAtgtatttgaaaactcaattctTGTCAGTAATAGA
TACTCGGTAATACATATGGATCTATAATTTTATTGGGATGATTAGATGAA
CAGGCTGGGCAAGATCTTTACCGATCCAATGACAGCTCTGTTTGTTATTC
TGTCAGTTTTTAAGGAGAGTAGAAATGTGTGCGTCAGAATAATTTCGCCA
AAAAAATAATGTTCAATAGCAGGCGATGGGACTATGTGGTGAAAAGAGTT
GACCTACTATACTATCATGTCCCACtcgatttttgaagtctttTCTTCGT
ATTAATGTGTATATTTCATCCTTTCA
Run BLAST on NCBI

transcript from alignment at scaffold_343:161831..171967-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060512 ID=TCONS_00060512|Name=TCONS_00060512|organism=Clytia hemisphaerica|type=transcript|length=10137bp|location=Sequence derived from alignment at scaffold_343:161831..171967- (Clytia hemisphaerica)
TAGATGTTTTTAGAATTATTTAATCAGAAAAGATTGACATATGAAGAATG
AAACAAAGAAAAGATCCAGTCAAATTGATGGTTGGAAAATGAAGCATGGA
AAGCAAAATACAGACCAACCAGAGGTAGTTGGTTGTTCATTTCAAATTTT
TTGTTTTTCCTGTCCTGTTTTTTTCGGTAGATTCAAATGATAGTATTGAT
TCAAAGCCTCCAAATCCAAGTACCAAAAGAACTGGATTAAATTAATTATT
TGCCATGACCCATCCACTTTTTTGCAAAGTAAAAATTTTTGGTTGCGCCT
CCTTAGACTCTATATTCAATGGCCCCCTACTTTCAATTCCGTGGCGTGGG
CANAGATCAAAAGTTATGGGCCTGTTTGTGGTCAAAAACTGATGGAAAAC
AGGGAATTTCCCCACAATCTGCATAATTTATGCAAAATTAAAAACCTTTT
TTGACCACAAATAAGAGTATCAACAAGACCATCTTTATCATTCTAAAGGC
TTTTGATGTGCAAGCTAAACCGGCGTTTATAACGACGGGAACCTTCTAGT
ATCTATCTATAGTCAAAGTTTGACGTTGATACCACTTTTACTTTAAAAAC
AAGATGTTCAAATTTCTAGATTTACAATGTAATATTTACTTAAAGGGACA
TAACAGTACTTGCGAAATTCAAGTAAACAAACTGTATGCAGCGGATACAA
AATCAAAACAAATANTGTTTCATTGTTTATTGTGTTTTAGATGAATGATC
CTGGATTTACTGACAGGTTTGTTTTCATATCATATACATAAAGTGTTTGT
TTACTTATTTTTTATAGTTAAATATTTTGTTGTTAGAACCACTTTGTCTA
AGGAATGTTCTTCATGCCGCCAATTTATGTCAATTCTTTCAGATGCTATC
GTTATTTCGATAGAAGACAAACTTCTTAAATCTGGCACTCTTCAATCTAT
TAGTTTTTTTTTATTCTTTTAGTGTTTTTCAAGACAAAGTAGCAAAATTT
TCAAAATTGTTGTGTGAAGCTGGCACCAGAGAGATCAAAACAAACGAAGA
GACATTGTTAAACATCAAAGCATTTAACAACATTGAAGATCCTCCAATAT
GTTTGGAGCAGTTCATGCAATGTCCTTCAAATTTTCGGAAACAAACATTT
TTTGAGGTTTGTGCTCTTTCTTCAAAGTTATCATTTTTATACAGTGACTT
ACAAATTGTATTGCTCACGGTCCACTTGTCTCTTCTTATACTTTTCTCAG
CGAAATGTTTGTAATAATTCTTCAATTTACTGCCCATTGCTTTTTATAGA
ATTTGAAAATCAACAATGTCATCATTGGAAAGTTAGCTGTATGTTCTGCC
AGTGGATGGACCGTTAAACTGCTAGGCGTCATGGAAGGTCAGAAAAGATG
GATAAAAGATTTGCAAATCACGGTAAAGTAAAGTCTTTCCTCATTCTCCG
TTGGATCTTTTAAATGAATTTTGAATCTTTCCAGGGCTTTTATTTTTGTA
CATCCTAAATAAAATTTGTAAAAGGTTGAACCTAAATTCAGAGCTTTACG
ATGCTTTTAGCAAATAGAAAACGTTATTGATCTACTCAGAAGATGTTTCA
AATTTAATTTGTTATTTTCCAGGCACGATTGGTGATCACAAAGTCTTATG
ATGATGATGTTGATGAAGATTATGAAGTTGGAGATCTTGTCAAAGGTTTG
TCTTTTAAAGATAATAAATCAAAGTTATGGATTTGTACGGATAAGCCATG
AAAAATATTGAATGATTTTCAAAAGAACTAAAACACTTACATGGATCCAC
CGAATACCTTTATTCTTAAAGAACGTCACTTAATATGAATTCAATTTGTA
TTATTTACTGTACTAATATAATGAACTTGGGCTAGAAGTTTACTTGAACT
ACAAAAAAGTTTTAAAGTTGCACATTCCATACAATTACACATTGATCAAT
GATATCAACTGCATATATTTGTTCCATATGTTTTCATAAAGCTAACAACT
CCAATGTTGTATTGAAAACCAAGCTGATGCTAATAATATCTTGTTTTTTC
AGCGCTTGTGGAGAAAGTTGATGTACAATCCAAAGATATATGGTTGACAC
TGGAACCCTCTGTTGCTGCCAAATCCCAATACCAATTGCCTAAGCTGGTA
AAAGTCATCGTTATTATNCAAGACAAAGTAGCAAAATTTTCAAAATTGTT
GTGTGAAGCTGGCACCAGAGAGATCAAAACAAACGAAGAGACATTGTTAA
ACATCAAAGCATTTAACAACATTGAAGATCCTCCAATATGTTTGGAGCAG
TTCATGCAATGTCCTTCAAATTTTCGGAAACAAACATTTTTTGAGGTTTG
TGCTCTTTCTTCAAAGTTATCATTTTTATACAGTGACTTACAAATTGTAT
TGCTCACGGTCCACTTGTCTCTTCTTATACTTTTCTCAGCGAAATGTTTG
TAATAATTCTTCAATTTACTGCCCATTGCTTTTTATAGAATTTGAAAATC
AACAATGTCATCATTGGAAAGTTAGCTGTATGTTCTGCCAGTGGATGGAC
CGTTAAACTGCTAGGCGTCATGGAAGGTCAGAAAAGATGGATAAAAGATT
TGCAAATCACGGTAAAGTAAAGTCTTTCCTCATTCTCCGTTGGATCTTTT
AAATGAATTTTGAATCTTTCCAGGGCTTTTATTTTTGTACATCCTAAATA
AAATTTGTAAAAGGTTGAACCTAAATTCAGAGCTTTACGATGCTTTTAGC
AAATAGAAAACGTTATTGATCTACTCAGAAGATGTTTCAAATTTAATTTG
TTATTTTCCAGGCACGATTGGTGATCACAAAGTCTTATGATGATGATGTT
GATGAAGATTATGAAGTTGGAGATCTTGTCAAAGGTTTGTCTTTTAAAGA
TAATAAATCAAAGTTATGGATTTGTACGGATAAGCCATGAAAAATATTGA
ATGATTTTCAAAAGAACTAAAACACTTACATGGATCCACCGAATACCTTT
ATTCTTAAAGAACGTCACTTAATATGAATTCAATTTGTATTATTTACTGT
ACTAATATAATGAACTTGGGCTAGAAGTTTACTTGAACTACAAAAAAGTT
TTAAAGTTGCACATTCCATACAATTACACATTGATCAATGATATCAACTG
CATATATTTGTTCCATATGTTTTCATAAAGCTAACAACTCCAATGTTGTA
TTGAAAACCAAGCTGATGCTAATAATATCTTGTTTTTTCAGCGCTTGTGG
AGAAAGTTGATGTACAATCCAAAGATATATGGTTGACACTGGAACCCTCT
GTTGCTGCCAAATCCCAATACCAATTGCCTAAGCTGGTAAAAGTCATCGT
TATTATTTCCGTGTTTAGGTCCCCAATGACGTTACAGAATGTCAAAACAA
CGTCCATAACATTTTTAAAACATTAGATGAACGTTGAAACGATGCTCTGT
GCGAGCTGGGGAGCTGGGGATTCACCAAATGGCTAACTCGCAGATTTCAA
AAAAGCCCGAAGGGGTTGATAGAGTGCTTTGGCTGAAAAGTGTGATCACG
TGACGTTACAATAAAATTTCAGCGCTTGATCAATCAGAAGCTTCGCGGGT
TTTCGAAAACAATAGCAGCAATACTTTTTCCAATATTCACTTTTTTTTGC
TTGGAAAAGCTTAAAGCACGCCATCTAGCCCTTCGGGCTTTACAATATAC
AAAAATCTTTGGGCTAACCCTCTTAGTAATAATAACTGTATCCTTTTTGT
TACTAAGCTCTGTTGCATTATTCTGTTAAGTAGCAGGATCGTTTAACTGA
GGTAGTCCTTTTGTTTCTTTTAATAAGCTGGGAATATTGTTTTTGTTTTC
ACAGGGCAAAATTCAGGACCCAGATACCGTTGAGTAGTAAGTTAACATTC
TTTTACAGTAATACAGATAACTGACTTTACTCTCCCATTTTTTACTCTTT
AAAATCTGATCGTGTTTTTTTTCTTTAACTTTCTCAAAAGTATTTCTCTT
TTTAACTATATTAACCCTCTTGAAAAACAATTCCTTATCGGTGCTCTCAA
AGATTTTTAACTGACACTGCATAAATGTTTCTTCAGAACATTTTTCGAAC
AGTTTTTAACTCGTGATCTTTCTTTACTTGCAGTCTTTTGGAAAGCCGTG
AATTTGATGAAGAAAATGACTCAGCATATTTGGAACACATACGCGATAGT
TCACTTTTCAATCATCCACACGGTGTTTCATTACTGGCAAGTCATTTTAA
TGTCAACCAAGACCATCATGGGTTTGTTGTATGGTAAGTCTAATATTGAT
TTGTTGGAGACAAAATTTACTCCTAACTTTACATTTAAACCACTTCCCGA
ATTTTGAAATATAACTTGTGTAAAGTACCTTTTAAATTTCATTGTTGATG
TTTTTTTGTTCACCTTATCGGCCCTTTTTACGCTGGCCCTAATTTAACGC
CGGCCCTTATTACGCCACGAGCCCAAAAATAACGCCAATAAAGGCCGGTG
TAAAAAGGGCCGATAAGGTAGTTTACATTTTATCTCCATTACTTTCAATC
ATTGGCTCTCAATAACAAACTAATATACTTTTTCCATCGCAGTAACACGC
TTAAGATTAAAGAAACGGCTCTTGAGCTTCGAGAGAAACAAATGCTTGAT
TGGTCAATGAGCATGTAAGTAGTCACGTGATAATAACCACATTACGAATA
AAATTGTCTTCAGTGTTGCAGAGTCACGCTGATTTTTCGTCTTAGTCGAG
GTAACACCCAGTAAAATTGACCTTTTCATAAATTACGTCACGAACATCAT
ACTTGCCTCGTTTTGAAATTATTGCCAAGGTGATCTACTCCCAGTGGATT
TTATTAAAACTACTTTCTATTTATAAAAAAATAATTTAATGTCTCAAGGG
ACATAGTCTCCATTGTAATTGTTTGAATACGAGGCAAGTGATGTTTGTGA
CGTAATTTATGAAAAGGTCTATGCAAATTGATTTCTTTTTTGAGTTCACA
AGTTGGAAAATAGTTACTGAAAGTTTCACTGAAAGTTCGAAACTTTCAAT
GTATTTTAAACTTTTTAAAACTTTTGATTATGTGTGTTTCAGGGTTGGGA
TTGGTGTGAAACATTTTCGTGAGAAGAATTTGAAGGAAGCAAAGAAATGT
TTGGATAAAGCTCTCAGCTTTTATCCGAAGAATGTTGAAGGTTTTGTGGC
AAGAGGAGCATTGTAAGTCAAATCCTGCGGCACATTTTAAACTCGCAGTT
TATAAAATGAGGCTATATTTTTGCTGTTTTGAGTTAGACATTAGTCTTAA
AGATGGCTAATCCATGACCTAGAAATATAGACAAGGCCTTTTAAAAATTC
AAAATATAAAGCCACCATTAGTTAACGTTGTTTTTGAATACATGAATGGT
ACGTTCTAGAATGATTTTACAAATATCCGAGATCTTTTTTCATTATCAGA
ACAAAACAAATATTAGCGAACAATTGCAACGAACACTACAAACATGTATG
ATATCCCTCCCCGCTAGGATCTTTAAAGTTATACCACCAGAGGTACTAGA
CTATGTAGAAAGAAAAGAAACAAAAATGTTATGAAAATGAATGTTAAATC
CGAGATCTATATCTTTTAGGAAAGCTAATCAAAGTGATTTGAAGGGAGCG
ATTGATGATTTTCGTAAAGCGTTAGAAGTCAATCCACATCATCGCAATGG
GAAGAAGTACTTGATTGAAACTTCACTCTCCTTAGCACGAAGGTAATAGT
ATTGTCATGTTGATATGCTCTTCTGCCACGCATTCTTTTTTTATGAATAG
TTTTTTTTTGCTGAGGGTTAAGTATTCTCAGGAATCTTGCCTAAACTGAG
GGTGAGATATTCTTAGTATTAGTATATCTTTCGAATGTCGTTCTTTAAAG
TCATTTAAAAACAAACGCAAAGAAGTGATGACCTTATTATATGAAAATAG
ACAAAAGAAAAAAGTTGGGAATCGGGACTTAATGTCATGGCTTACATAAA
AAGCTTAAGAAAGATTTCATCAAATACCATAATCAAATACGTCATGCACA
ATTGACAACGTCATTCTCATTAAGTATCACGCCCTGGTAGATTAATGCCG
TACACCTTTTTGAAATCAAAAAAGATTGAAGCGAGCTTAAACTAATTACG
GTTAGTTATAAAGCCCAATTGGAAATGGGGACAAGCCCTAAAAACTAAGA
CAAATTTTGTATGAATTTTTTACCAATCTAAAAAGTAAAGCACCTAACCA
TGCAAACGCACCTATGAGGTAGTCTTGTAAAATGAGACGATTAAAAAGAA
TCCGGCTGGATAAAGCTTCGTGACTGGTGGTAGAACAAATGTTTGTTATT
TGTAATGCAGGTCAGGTTCTATATACAAAATGATATACAATATATTATAT
ACAATAGATCTTATCGGAGTTTTTGATTTTTCTAAAAAAGTGATGTTTTG
GGAGTATTACAATAGAAATCTCTTAGGAATTCCTCGAGGGAATTCTATTG
TAATACTCCCGAAACAATCCCACAAAGAATCGCTTTTTTAGAAAAATCAA
AAACTCCGATAAGATCTATTTCATGTATATTGGCAGTAAAAACTGTTAGG
TCAATAATGAGAATCAAACGACGGGTGATTAAAACAATCCCCAAATGGTT
CGTTGTATCATCACTAAGTCTGATTAAAAACAGTTTTTCTAATCCTTACA
GTCACGAGAAAGAGAAGCGTTGGAAAGAAAGTTCAAAGTGTTATCACGAG
ATTATGAAACATGATCCAGATCATAAAGAAGCAAAAGAAAGATATCATCA
AATTCATCAAATACTGTCTTCTAAGGTAACCGCTATCCATATCTTAATGG
TGTCACGTGACTTAATTCTGTATGTCAAGTTTGTTTTGTTTTGGTATTAG
GCGCTATCAAGCAACCAATTTCTCCAACCTAATCTAGATTTGGAATCTAG
GAAAATGTTGAGAAAAAAAATAGTGCTTCATTGTGCCTTTGTTTCATTTT
TTTTGTAATTCTAACATTTCTTTTCTGATAGTTCACACCCCTCTTATTCT
GACAGAAATCTATTTTGTCGAAATTCCAAGTATTTAAACATTTATAATTT
ATAAGACAGGAAACAGAAACTTTTACCATATTTTCCACAATTTTTTAAAA
GCTCTTTCGTGATCTTTGAAGACAGTAGTACCCACAAGGTACTAACTGCA
AATTCCAAAAATGAAATATGACCCACCACGGTACTAACCGTCATGATGTC
TGGTACCAACTGCATGACCCCTCCCCCTGGAAAAAATGTTAAATGCCAAA
CAGCTCTAGAATGGTTGGAGACGTTTAACTAAACGTATTTGCTATTCTTC
TTCTCTTTTCATAAATCCTTGGCTTGTATTCTGTTTCATCTCCAACAAAT
CATTTGATATCTTTAACTCCATCAAACTTCTATATCAATACAATTTGCAA
CTGGATGATTGGTGACCTCATTGGAATTGCTGTAATGTACAATGTTATCA
TTTCTCTATTTTAATTGATATTTTACTGCAAACGATTTCAAACTTTTATT
GGACCTTTTTACTCATCATTTGACAAATGAATTGCTATTTTTTGCTTGTA
TTTTGATAATGATCTAATCCCTAACTTTTTAAACATTGTCAACTCTATCC
ATTAACTATATCCAACTGTGTGAAATATGTGGTATTATGTTCATCACATA
ATGTTCAATCCAATCAAACAATGACGTCACATCCTTTATTATTTCCACTG
GAACCCAAACTAAATCTACGCTATATATACAAAAATTTGGTTCCACCATG
CATTATCGCCACACTTATTACTTATTTTCTGTAAAACGTGGAGATTATAA
GCGGTCGAGAAGCAGCGAAAAATGAAGAGACAAGTTCCCATCGTCGTAAC
AGTGCAAGTAGCAAGACGAAGGATCGTATCGAACAGTTGAAACGTTTGCT
ACAAGAAGATACAAACAAAAATTCCTCAAGGTAAGATTGATTCCGCATCT
CACTTCATCCTTAGAAAATGAGATGCTAAACAAACATTTGCTCTTTTTCG
AACCTCAAAGACTGCCCTCGTCCTGCCAGATACTAATTTTTACCTCGAAA
GAGGTCCTCTAGGAAAAAAGTGTAGTAACTATTTCTTAAGACATATGATT
CTGAACTGGGATTTAAACTAGAACACTAAATTTTGTTTAAATCGTTTGTG
TGCTAAAGGGACAGGAAATTTTTTTTGAGCTACAGAGCTTCGCACTATGA
TTATAAAACTTTTCGGTATTGAGCAATACCATATAATTTGCATCCTTCCT
AAATCTAATAATGTTGCGGAAATCTGTTCATCCTGTAATAAGGTTTTTGA
CGTTAATAATTCATCCAAAAAAATCATGAAATTGAAAAATCCTTAAAAAA
TTGCACTGTCAGGTGAATAATTCTCATTTTCCCTTTAGTAATAGTCGTTT
ACCCTTAATGATAATTATTCGATTTGTTAATGTCAAATAGTTTAATGAAT
CTTATTTCTTATTTTCCCCTTTTAAGGATTGTATTTTAACTGTTTATTCT
CGAACATTTCAAACACCCTTTTGAAGCAGTTTTTTTAAGCTTTTTATTTC
CGTTAAAGCAAGAAAGAAAGTTTGCGACCATATGATGTTTGTCCTTTTTC
AGTCTCTTAGGCCAGGGGCCGCGACTTATTTTAAGGTTATTAAACAGAAT
TTTGGCTTGATTAGTAAATTTTTTTTTGATTTGAAAAAATGTGGTTGGGC
CAAGGCCCGACTGGCCCCCCGGTGTCGCGACGCCTGTAGGCTAAGTAGTA
CTATTTTTTACCGGTTCCCCGAGTGTACTCCTTATCGGTATTCAGCTGTA
TAGAGTTATTTGATTGTGATTATTAATATTTTTATATAATGCATGAGACA
TGTTCTCGATCCTAACTTAACGAATCTGTTCGGAAGAAACCCTTGCTTAC
GTTCAACGGCGCTACATCAAAATCCGCGACGAAAAGTAAATCTACCCCTC
TTAATGTGGGTACCCCTTTTCTGAAAAATTCGATGAAGAAATAGGTGGAT
ATAGCTTAGTGCAAGGTTTTATAGAGGTCAGTGATTATCACATTTTGTTT
TCTTCTTCTTAGCTCTTCTTCAACTTCTTCTTCATCCTCTTCGTCATCGG
AAAGTGAAAGTGAAAGTAATTCATCATCGGGCGAGGACTGGATCGAGAAA
ACAAACTCAAAGTCAAGAAAAAGAGTATCTGATCGCAAACGTAGGAGTCA
TCACAAACATTATTCATCAAAATCGAGAAAGAATCGTAAACGGTCGAGAA
AATCTTCGAGTCAATCTCCAGAGAGACATTCTCGCAAGAACCTATACGAG
ACTTCAGAAACAAGTCGTAAAGAAAGAGATTTTAAGTCAACTCACGAGCC
TGGTGGAGCTTCAAATTTGTTAGACAATAATGCTTTAGATAAGGATGCGA
AACAGATTTTACGAAAACTTAAAGACTTTTCTTCCGAGGAAATCGATATT
GTTAAGAAAATGTTACGGAAAAACGAATCGGCAGAAAATACTTCGAAGGA
TGATCGAAAAGTTGAAGAAAAATCGAAGGGCTATCGAGAAAGTAGACATT
CACCGAGAAATTACCGTGATACTGAAAAATCAACAAGAGATTATCGATCT
TCTTTGTATTCTAGTCGAAATCGAGACGATTTGAGGAGAAACGAAGATCG
ATATGATCGAAAAGATGACTACAGACATTCCAAACGAGAGAAATATTCGA
AACAATCGAGCTATGATCAAAGGGATTAATCATTCTTTAGGACATTTTCT
TTTATAGCGTAATTTTTCATACACAAATGTATTTGAAAACTCAATTCTTG
TCAGTAATAGATACTCGGTAATACATATGGATCTATAATTTTATTGGGAT
GATTAGATGAACAGGCTGGGCAAGATCTTTACCGATCCAATGACAGCTCT
GTTTGTTATTCTGTCAGTTTTTAAGGAGAGTAGAAATGTGTGCGTCAGAA
TAATTTCGCCAAAAAAATAATGTTCAATAGCAGGCGATGGGACTATGTGG
TGAAAAGAGTTGACCTACTATACTATCATGTCCCACTCGATTTTTGAAGT
CTTTTCTTCGTATTAATGTGTATATTTCATCCTTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038061XLOC_038061Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060512-exon-scaffold_343-1575043694:171844..171967TCONS_00060512-exon-scaffold_343-1575043694:171844..171967Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1575043694:171202..171227TCONS_00060512-exon-scaffold_343-1575043694:171202..171227Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1575043694:170812..170995TCONS_00060512-exon-scaffold_343-1575043694:170812..170995Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1575043694:169357..169479TCONS_00060512-exon-scaffold_343-1575043694:169357..169479Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1575043694:169084..169156TCONS_00060512-exon-scaffold_343-1575043694:169084..169156Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1575043694:168632..168726TCONS_00060512-exon-scaffold_343-1575043694:168632..168726Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1575043694:168082..168113TCONS_00060512-exon-scaffold_343-1575043694:168082..168113Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1575043694:167685..167834TCONS_00060512-exon-scaffold_343-1575043694:167685..167834Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1575043694:167304..167375TCONS_00060512-exon-scaffold_343-1575043694:167304..167375Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1575043694:166756..166875TCONS_00060512-exon-scaffold_343-1575043694:166756..166875Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1575043694:166226..166348TCONS_00060512-exon-scaffold_343-1575043694:166226..166348Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1575043694:163988..165266TCONS_00060512-exon-scaffold_343-1575043694:163988..165266Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1575043694:161831..162855TCONS_00060512-exon-scaffold_343-1575043694:161831..162855Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1510915933:171844..171967TCONS_00060512-exon-scaffold_343-1510915933:171844..171967Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1510915933:171202..171227TCONS_00060512-exon-scaffold_343-1510915933:171202..171227Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1510915933:170812..170995TCONS_00060512-exon-scaffold_343-1510915933:170812..170995Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1510915933:169357..169479TCONS_00060512-exon-scaffold_343-1510915933:169357..169479Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1510915933:169084..169156TCONS_00060512-exon-scaffold_343-1510915933:169084..169156Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1510915933:168632..168726TCONS_00060512-exon-scaffold_343-1510915933:168632..168726Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1510915933:168082..168113TCONS_00060512-exon-scaffold_343-1510915933:168082..168113Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1510915933:167685..167834TCONS_00060512-exon-scaffold_343-1510915933:167685..167834Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1510915933:167304..167375TCONS_00060512-exon-scaffold_343-1510915933:167304..167375Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1510915933:166756..166875TCONS_00060512-exon-scaffold_343-1510915933:166756..166875Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1510915933:166226..166348TCONS_00060512-exon-scaffold_343-1510915933:166226..166348Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1510915933:163988..165266TCONS_00060512-exon-scaffold_343-1510915933:163988..165266Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1510915933:161831..162855TCONS_00060512-exon-scaffold_343-1510915933:161831..162855Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1491911889:171844..171967TCONS_00060512-exon-scaffold_343-1491911889:171844..171967Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1491911889:171202..171227TCONS_00060512-exon-scaffold_343-1491911889:171202..171227Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1491911889:170812..170995TCONS_00060512-exon-scaffold_343-1491911889:170812..170995Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1491911889:169357..169479TCONS_00060512-exon-scaffold_343-1491911889:169357..169479Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1491911889:169084..169156TCONS_00060512-exon-scaffold_343-1491911889:169084..169156Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1491911889:168632..168726TCONS_00060512-exon-scaffold_343-1491911889:168632..168726Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1491911889:168082..168113TCONS_00060512-exon-scaffold_343-1491911889:168082..168113Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1491911889:167685..167834TCONS_00060512-exon-scaffold_343-1491911889:167685..167834Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1491911889:167304..167375TCONS_00060512-exon-scaffold_343-1491911889:167304..167375Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1491911889:166756..166875TCONS_00060512-exon-scaffold_343-1491911889:166756..166875Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1491911889:166226..166348TCONS_00060512-exon-scaffold_343-1491911889:166226..166348Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1491911889:163988..165266TCONS_00060512-exon-scaffold_343-1491911889:163988..165266Clytia hemisphaericaexon
TCONS_00060512-exon-scaffold_343-1491911889:161831..162855TCONS_00060512-exon-scaffold_343-1491911889:161831..162855Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_343supercontigscaffold_343:161831..171967 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.05395	1.07718	0.835328	0.500118	3.53439	1.7536	2.40098	2.21893	2.59005	1.63017	2.00887	3.08426	2.05184	2.68935	2.23925	1.47879	1.89807	1.88478	1.69346	1.43932	2.25849	1.67451	1.44934	1.79719	0.747316	1.30762	1.42662	0.964457	0.818536	1.07976
Blast
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BLAST of TCONS_00060512 vs. Swiss-Prot (Human)
Match: TTC14 (Tetratricopeptide repeat protein 14 OS=Homo sapiens GN=TTC14 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.444e-29
Identity = 98/332 (29.52%), Postives = 169/332 (50.90%), Query Frame = 2 
Query:  269 PPICLEQFMQCPSNFRKQTFFENLKINNVIIGKLAVCSASGWTVKLLGVMEGQKRWIKDLQITA----RLVITKSXXXXXXXXXXXGDLVKALVEKVDVQSKDIWLTLEPSVAAKSQYQLPKLGKIQDPDTVEYLLESREFDEENDSAYLEHIRDSSL-FNHPHGVSLLASHFNVNQDHHGFVV----CNTLKIKETALELREKQMLDWSMSMVGIGVKHFREKNLKEAKKCLDKALSFYPKNVEGFVARGALKANQSDLKGAIDDFRKALEVNPHHRNGKKYLIETSLSLARSHEKEKRWKESSKCYHEIMKHDPDHKEAKERYHQIHQIL 1237
            PP  LEQFM+ PS  R++ FF +++  +++IG+++     G+ + L+ +  G  R I  L+ITA    R V + S   D    Y+ GD+++A ++ +D   + + ++L  S        + KLG I   +   Y   S E +  +  +Y E++  SSL F +P  V  L     +++ +   ++           + A  LR+KQ   W++  V IGV +F+     +A    +KAL    +NVE  VARGAL A +  L  AI+DF  ALE  P HRN +KYL +T +      E+E+++  +   Y + +  D   K+A++   ++H+ +
Sbjct:  102 PP--LEQFMEIPSMDRRELFFRDIERGDIVIGRISSIREFGFFMVLICLGSGIMRDIAHLEITALCPLRDVPSHSNHGDPLSYYQTGDIIRAGIKDIDRYHEKLAVSLYSSSLPPHLSGI-KLGVISSEELPLYYRRSVELNSNSLESY-ENVMQSSLGFVNPGVVEFLLEKLGIDESNPPSLMRGLQSKNFSEDDFASALRKKQSASWALKCVKIGVDYFKVGRHVDAMNEYNKALEIDKQNVEALVARGALYATKGSLNKAIEDFELALENCPTHRNARKYLCQTLVERGGQLEEEEKFLNAESYYKKALALDETFKDAEDALQKLHKYM 429
The following BLAST results are available for this feature:
BLAST of TCONS_00060512 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TTC142.444e-2929.52Tetratricopeptide repeat protein 14 OS=Homo sapien... [more]
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