TCONS_00060504 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060504
Unique NameTCONS_00060504
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2671

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060504 ID=TCONS_00060504|Name=TCONS_00060504|organism=Clytia hemisphaerica|type=transcript|length=2671bp
TAGatgtttttagaattatttAATCAGAAAAGATTGACATATGAAGaatg
aaacaaagaaaagatcCAGTCAAATTGATGGTTGGAAAATGAAGCATGGA
AAGCAAAATACAGACCAACCAGAGATGAATGATCCTGGATTTACTGACAG
tgTTTTTCAAGACAAagtagcaaaattttcaaaattgttgtgTGAAGCTG
GCACCAGAGAGATCAAAACAAACGAAGAGACATTGTTAAACATCAAAGCA
TTTAACAACATTGAAGATCCTCCAATATGTTTGGAGCAGTTCATGCAATG
TCCTTCAAATTTTCGGaaacaaacattttttgagaatttgaaaatcaaca
aTGTCATCATTGGAAAGTTAGCTGTATGTTCTGCCAGTGGATGGACCGTT
AAACTGCTAGGCGTCATGGAAGGTCAGAAAAGATGGATAAAAGATTTGCA
AATCACGGCACGATTGGTGATCACAAagtcttatgatgatgatgttgATG
AAGATTATGAAGTTGGAGATCTTGTCAAAGCGCTTGTGGAGAAAGTTGAT
GTACAATCCAAAGATATATGGTTGACACTGGAACCCTCTGTTGCTGCCAA
ATCCCAATACCAATTGCCTAAGCTGGGCAAAATTCAGGACCCAGATACCG
TTGAGTATCTTTTGGAAAGCCGTgaatttgatgaagaaaatgACTCAGCA
TATTTGGAACACATACGCGATAGTTCACTTTTCAATCATCCACACGGTGT
TTCATTACTGGCAAGTCATTTTAATGTCAACCAAGACCATCATGGGTTTG
TTGTATGTAACACGCTTAAGATTAAAGAAACGGCTCTTGAGCTTCGAGAG
AAACAAATGCTTGATTGGTCAATGAGCATGGTTGGGATTGGTGTGAAACA
TTTTCGTGAGAAGAATTTGAAGGAAGCAAAGAAATGTTTGGATAAAGCTC
TCAGCTTTTATCCGAAGAATGTTGAAGGTTTTGTGGCAAGAGGAGCATTG
AAAGCTAATCAAAGTGATTTGAAGGGAGCGATTGATGATTTTCGTAAAGC
GTTAGAAGTCAATCCACATCATCGCAATGGGAAGAAGTACTTGATTGAAA
CTTCACTCTCCTTAGCACGAAGTCACGAGAAAGAGAAGCGTTGGAAAGAA
AGTTCAAAGTGTTATCACGAGATTATGAAACATGATCCAGATCATAAAGA
AGCAAAAGAAAGATATCATCAAATTCATCAAATACTGTCTTCTAAGATTA
TAAGCGGTCGAGAAGCAGCGAAAAATGAAGAGACAAGTTCCCATCGTCGT
AACAGTGCAAGTAGCAAGACGAAGGATCGTATCGAACAGTTGAAACGTTT
GCTACAAGAAGATACAAACAAAAATTCCTCAAGCTCTTCTTCAACTTCTT
CTTCATCCTCTTCGTCATcggaaagtgaaagtgaaagtaattcATCATCG
GGCGAGGACTGGATCGAGAAAACAAACTCAAAGTCAAGAAAAAGAGTATC
TGATCGCAAACGTAGGAGTCATCACAAACATTATTCATCAAAATCGAGAA
AGAATCGTAAACGGTCGAGAAAATCTTCGAGTCAATCTCCAGAGAGACAT
TCTCGCAAGAACCTATACGAGACTTCAGAAACAAGTCGTAAAGAAAGAGA
TTTTAAGTCAACTCACGAGCCTGGTGGAGCTTCAAATTTGTTAGACAATA
ATGCTTTAGATAAGGATGCGAAACAGATTTTACGAAAACTTAAAGACTTT
TCTTCCGAGGAAATCGATATTGTTAAGAAAATGTTACGGAAAAACGAATC
GGCAGAAAATACTTCGAAGGATGATcgaaaagttgaagaaaaatcGAAGG
GCTATCGAGAAAGTAGACATTCACCGAGAAATTACCGTGATACTGAAAAA
TCAACAAGAGATTATCGATCTTCTTTGTATTCTAGTCGAAATCGAGACGA
TTTGAGGAGAAACGAAGATCGATATGATCGAAAAGATGACTACAGACATT
CCAAACGAGAGAAATATTCGAAACAATCGAGCTATGATCAAAGGGATTAA
TCATTCTTTAGGACATTTTCTTTTATAGCGTAATTTTTCATACACAAAtg
tatttgaaaactcaattctTGTCAGTAATAGATACTCGGTAATACATATG
GATCTATAATTTTATTGGGATGATTAGATGAACAGGCTGGGCAAGATCTT
TACCGATCCAATGACAGCTCTGTTTGTTATTCTGTCAGTTTTTAAGGAGA
GTAGAAATGTGTGCGTCAGAATAATTTCGCCAAAAAAATAATGTTCAATA
GCAGGCGATGGGACTATGTGGTGAAAAGAGTTGACCTACTATACTATCAT
GTCCCACtcgatttttgaagtctttTCTTCGTATTAATGTGTATATTTCA
TCCTTTCACACGCAGCAGTAAAGACATAACAATATGAGAAATGACAACGT
CTGAAGATATCCCTTAACAGTTAGTTgaagtttattttgaaagtggtTTT
GTGGTATTTTATGATGGATTACATAACTGCTGGGTTGATTGCTGCCATTG
GGAGAGTTGCCAAGAAAAGTGTTTCACTGTTTTACTGTTTTCACGACATG
CTTTATGCGAAAGCTAAAAGATGGTATTATCAACTTTATTTAATGACTAT
CTATGGGTTTCCTGTTTGGCT
Run BLAST on NCBI

transcript from alignment at scaffold_343:157424..171967-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060504 ID=TCONS_00060504|Name=TCONS_00060504|organism=Clytia hemisphaerica|type=transcript|length=14544bp|location=Sequence derived from alignment at scaffold_343:157424..171967- (Clytia hemisphaerica)
TAGATGTTTTTAGAATTATTTAATCAGAAAAGATTGACATATGAAGAATG AAACAAAGAAAAGATCCAGTCAAATTGATGGTTGGAAAATGAAGCATGGA AAGCAAAATACAGACCAACCAGAGGTAGTTGGTTGTTCATTTCAAATTTT TTGTTTTTCCTGTCCTGTTTTTTTCGGTAGATTCAAATGATAGTATTGAT TCAAAGCCTCCAAATCCAAGTACCAAAAGAACTGGATTAAATTAATTATT TGCCATGACCCATCCACTTTTTTGCAAAGTAAAAATTTTTGGTTGCGCCT CCTTAGACTCTATATTCAATGGCCCCCTACTTTCAATTCCGTGGCGTGGG CANAGATCAAAAGTTATGGGCCTGTTTGTGGTCAAAAACTGATGGAAAAC AGGGAATTTCCCCACAATCTGCATAATTTATGCAAAATTAAAAACCTTTT TTGACCACAAATAAGAGTATCAACAAGACCATCTTTATCATTCTAAAGGC TTTTGATGTGCAAGCTAAACCGGCGTTTATAACGACGGGAACCTTCTAGT ATCTATCTATAGTCAAAGTTTGACGTTGATACCACTTTTACTTTAAAAAC AAGATGTTCAAATTTCTAGATTTACAATGTAATATTTACTTAAAGGGACA TAACAGTACTTGCGAAATTCAAGTAAACAAACTGTATGCAGCGGATACAA AATCAAAACAAATANTGTTTCATTGTTTATTGTGTTTTAGATGAATGATC CTGGATTTACTGACAGGTTTGTTTTCATATCATATACATAAAGTGTTTGT TTACTTATTTTTTATAGTTAAATATTTTGTTGTTAGAACCACTTTGTCTA AGGAATGTTCTTCATGCCGCCAATTTATGTCAATTCTTTCAGATGCTATC GTTATTTCGATAGAAGACAAACTTCTTAAATCTGGCACTCTTCAATCTAT TAGTTTTTTTTTATTCTTTTAGTGTTTTTCAAGACAAAGTAGCAAAATTT TCAAAATTGTTGTGTGAAGCTGGCACCAGAGAGATCAAAACAAACGAAGA GACATTGTTAAACATCAAAGCATTTAACAACATTGAAGATCCTCCAATAT GTTTGGAGCAGTTCATGCAATGTCCTTCAAATTTTCGGAAACAAACATTT TTTGAGGTTTGTGCTCTTTCTTCAAAGTTATCATTTTTATACAGTGACTT ACAAATTGTATTGCTCACGGTCCACTTGTCTCTTCTTATACTTTTCTCAG CGAAATGTTTGTAATAATTCTTCAATTTACTGCCCATTGCTTTTTATAGA ATTTGAAAATCAACAATGTCATCATTGGAAAGTTAGCTGTATGTTCTGCC AGTGGATGGACCGTTAAACTGCTAGGCGTCATGGAAGGTCAGAAAAGATG GATAAAAGATTTGCAAATCACGGTAAAGTAAAGTCTTTCCTCATTCTCCG TTGGATCTTTTAAATGAATTTTGAATCTTTCCAGGGCTTTTATTTTTGTA CATCCTAAATAAAATTTGTAAAAGGTTGAACCTAAATTCAGAGCTTTACG ATGCTTTTAGCAAATAGAAAACGTTATTGATCTACTCAGAAGATGTTTCA AATTTAATTTGTTATTTTCCAGGCACGATTGGTGATCACAAAGTCTTATG ATGATGATGTTGATGAAGATTATGAAGTTGGAGATCTTGTCAAAGGTTTG TCTTTTAAAGATAATAAATCAAAGTTATGGATTTGTACGGATAAGCCATG AAAAATATTGAATGATTTTCAAAAGAACTAAAACACTTACATGGATCCAC CGAATACCTTTATTCTTAAAGAACGTCACTTAATATGAATTCAATTTGTA TTATTTACTGTACTAATATAATGAACTTGGGCTAGAAGTTTACTTGAACT ACAAAAAAGTTTTAAAGTTGCACATTCCATACAATTACACATTGATCAAT GATATCAACTGCATATATTTGTTCCATATGTTTTCATAAAGCTAACAACT CCAATGTTGTATTGAAAACCAAGCTGATGCTAATAATATCTTGTTTTTTC AGCGCTTGTGGAGAAAGTTGATGTACAATCCAAAGATATATGGTTGACAC TGGAACCCTCTGTTGCTGCCAAATCCCAATACCAATTGCCTAAGCTGGTA AAAGTCATCGTTATTATNCAAGACAAAGTAGCAAAATTTTCAAAATTGTT GTGTGAAGCTGGCACCAGAGAGATCAAAACAAACGAAGAGACATTGTTAA ACATCAAAGCATTTAACAACATTGAAGATCCTCCAATATGTTTGGAGCAG TTCATGCAATGTCCTTCAAATTTTCGGAAACAAACATTTTTTGAGGTTTG TGCTCTTTCTTCAAAGTTATCATTTTTATACAGTGACTTACAAATTGTAT TGCTCACGGTCCACTTGTCTCTTCTTATACTTTTCTCAGCGAAATGTTTG TAATAATTCTTCAATTTACTGCCCATTGCTTTTTATAGAATTTGAAAATC AACAATGTCATCATTGGAAAGTTAGCTGTATGTTCTGCCAGTGGATGGAC CGTTAAACTGCTAGGCGTCATGGAAGGTCAGAAAAGATGGATAAAAGATT TGCAAATCACGGTAAAGTAAAGTCTTTCCTCATTCTCCGTTGGATCTTTT AAATGAATTTTGAATCTTTCCAGGGCTTTTATTTTTGTACATCCTAAATA AAATTTGTAAAAGGTTGAACCTAAATTCAGAGCTTTACGATGCTTTTAGC AAATAGAAAACGTTATTGATCTACTCAGAAGATGTTTCAAATTTAATTTG TTATTTTCCAGGCACGATTGGTGATCACAAAGTCTTATGATGATGATGTT GATGAAGATTATGAAGTTGGAGATCTTGTCAAAGGTTTGTCTTTTAAAGA TAATAAATCAAAGTTATGGATTTGTACGGATAAGCCATGAAAAATATTGA ATGATTTTCAAAAGAACTAAAACACTTACATGGATCCACCGAATACCTTT ATTCTTAAAGAACGTCACTTAATATGAATTCAATTTGTATTATTTACTGT ACTAATATAATGAACTTGGGCTAGAAGTTTACTTGAACTACAAAAAAGTT TTAAAGTTGCACATTCCATACAATTACACATTGATCAATGATATCAACTG CATATATTTGTTCCATATGTTTTCATAAAGCTAACAACTCCAATGTTGTA TTGAAAACCAAGCTGATGCTAATAATATCTTGTTTTTTCAGCGCTTGTGG AGAAAGTTGATGTACAATCCAAAGATATATGGTTGACACTGGAACCCTCT GTTGCTGCCAAATCCCAATACCAATTGCCTAAGCTGGTAAAAGTCATCGT TATTATTTCCGTGTTTAGGTCCCCAATGACGTTACAGAATGTCAAAACAA CGTCCATAACATTTTTAAAACATTAGATGAACGTTGAAACGATGCTCTGT GCGAGCTGGGGAGCTGGGGATTCACCAAATGGCTAACTCGCAGATTTCAA AAAAGCCCGAAGGGGTTGATAGAGTGCTTTGGCTGAAAAGTGTGATCACG TGACGTTACAATAAAATTTCAGCGCTTGATCAATCAGAAGCTTCGCGGGT TTTCGAAAACAATAGCAGCAATACTTTTTCCAATATTCACTTTTTTTTGC TTGGAAAAGCTTAAAGCACGCCATCTAGCCCTTCGGGCTTTACAATATAC AAAAATCTTTGGGCTAACCCTCTTAGTAATAATAACTGTATCCTTTTTGT TACTAAGCTCTGTTGCATTATTCTGTTAAGTAGCAGGATCGTTTAACTGA GGTAGTCCTTTTGTTTCTTTTAATAAGCTGGGAATATTGTTTTTGTTTTC ACAGGGCAAAATTCAGGACCCAGATACCGTTGAGTAGTAAGTTAACATTC TTTTACAGTAATACAGATAACTGACTTTACTCTCCCATTTTTTACTCTTT AAAATCTGATCGTGTTTTTTTTCTTTAACTTTCTCAAAAGTATTTCTCTT TTTAACTATATTAACCCTCTTGAAAAACAATTCCTTATCGGTGCTCTCAA AGATTTTTAACTGACACTGCATAAATGTTTCTTCAGAACATTTTTCGAAC AGTTTTTAACTCGTGATCTTTCTTTACTTGCAGTCTTTTGGAAAGCCGTG AATTTGATGAAGAAAATGACTCAGCATATTTGGAACACATACGCGATAGT TCACTTTTCAATCATCCACACGGTGTTTCATTACTGGCAAGTCATTTTAA TGTCAACCAAGACCATCATGGGTTTGTTGTATGGTAAGTCTAATATTGAT TTGTTGGAGACAAAATTTACTCCTAACTTTACATTTAAACCACTTCCCGA ATTTTGAAATATAACTTGTGTAAAGTACCTTTTAAATTTCATTGTTGATG TTTTTTTGTTCACCTTATCGGCCCTTTTTACGCTGGCCCTAATTTAACGC CGGCCCTTATTACGCCACGAGCCCAAAAATAACGCCAATAAAGGCCGGTG TAAAAAGGGCCGATAAGGTAGTTTACATTTTATCTCCATTACTTTCAATC ATTGGCTCTCAATAACAAACTAATATACTTTTTCCATCGCAGTAACACGC TTAAGATTAAAGAAACGGCTCTTGAGCTTCGAGAGAAACAAATGCTTGAT TGGTCAATGAGCATGTAAGTAGTCACGTGATAATAACCACATTACGAATA AAATTGTCTTCAGTGTTGCAGAGTCACGCTGATTTTTCGTCTTAGTCGAG GTAACACCCAGTAAAATTGACCTTTTCATAAATTACGTCACGAACATCAT ACTTGCCTCGTTTTGAAATTATTGCCAAGGTGATCTACTCCCAGTGGATT TTATTAAAACTACTTTCTATTTATAAAAAAATAATTTAATGTCTCAAGGG ACATAGTCTCCATTGTAATTGTTTGAATACGAGGCAAGTGATGTTTGTGA CGTAATTTATGAAAAGGTCTATGCAAATTGATTTCTTTTTTGAGTTCACA AGTTGGAAAATAGTTACTGAAAGTTTCACTGAAAGTTCGAAACTTTCAAT GTATTTTAAACTTTTTAAAACTTTTGATTATGTGTGTTTCAGGGTTGGGA TTGGTGTGAAACATTTTCGTGAGAAGAATTTGAAGGAAGCAAAGAAATGT TTGGATAAAGCTCTCAGCTTTTATCCGAAGAATGTTGAAGGTTTTGTGGC AAGAGGAGCATTGTAAGTCAAATCCTGCGGCACATTTTAAACTCGCAGTT TATAAAATGAGGCTATATTTTTGCTGTTTTGAGTTAGACATTAGTCTTAA AGATGGCTAATCCATGACCTAGAAATATAGACAAGGCCTTTTAAAAATTC AAAATATAAAGCCACCATTAGTTAACGTTGTTTTTGAATACATGAATGGT ACGTTCTAGAATGATTTTACAAATATCCGAGATCTTTTTTCATTATCAGA ACAAAACAAATATTAGCGAACAATTGCAACGAACACTACAAACATGTATG ATATCCCTCCCCGCTAGGATCTTTAAAGTTATACCACCAGAGGTACTAGA CTATGTAGAAAGAAAAGAAACAAAAATGTTATGAAAATGAATGTTAAATC CGAGATCTATATCTTTTAGGAAAGCTAATCAAAGTGATTTGAAGGGAGCG ATTGATGATTTTCGTAAAGCGTTAGAAGTCAATCCACATCATCGCAATGG GAAGAAGTACTTGATTGAAACTTCACTCTCCTTAGCACGAAGGTAATAGT ATTGTCATGTTGATATGCTCTTCTGCCACGCATTCTTTTTTTATGAATAG TTTTTTTTTGCTGAGGGTTAAGTATTCTCAGGAATCTTGCCTAAACTGAG GGTGAGATATTCTTAGTATTAGTATATCTTTCGAATGTCGTTCTTTAAAG TCATTTAAAAACAAACGCAAAGAAGTGATGACCTTATTATATGAAAATAG ACAAAAGAAAAAAGTTGGGAATCGGGACTTAATGTCATGGCTTACATAAA AAGCTTAAGAAAGATTTCATCAAATACCATAATCAAATACGTCATGCACA ATTGACAACGTCATTCTCATTAAGTATCACGCCCTGGTAGATTAATGCCG TACACCTTTTTGAAATCAAAAAAGATTGAAGCGAGCTTAAACTAATTACG GTTAGTTATAAAGCCCAATTGGAAATGGGGACAAGCCCTAAAAACTAAGA CAAATTTTGTATGAATTTTTTACCAATCTAAAAAGTAAAGCACCTAACCA TGCAAACGCACCTATGAGGTAGTCTTGTAAAATGAGACGATTAAAAAGAA TCCGGCTGGATAAAGCTTCGTGACTGGTGGTAGAACAAATGTTTGTTATT TGTAATGCAGGTCAGGTTCTATATACAAAATGATATACAATATATTATAT ACAATAGATCTTATCGGAGTTTTTGATTTTTCTAAAAAAGTGATGTTTTG GGAGTATTACAATAGAAATCTCTTAGGAATTCCTCGAGGGAATTCTATTG TAATACTCCCGAAACAATCCCACAAAGAATCGCTTTTTTAGAAAAATCAA AAACTCCGATAAGATCTATTTCATGTATATTGGCAGTAAAAACTGTTAGG TCAATAATGAGAATCAAACGACGGGTGATTAAAACAATCCCCAAATGGTT CGTTGTATCATCACTAAGTCTGATTAAAAACAGTTTTTCTAATCCTTACA GTCACGAGAAAGAGAAGCGTTGGAAAGAAAGTTCAAAGTGTTATCACGAG ATTATGAAACATGATCCAGATCATAAAGAAGCAAAAGAAAGATATCATCA AATTCATCAAATACTGTCTTCTAAGGTAACCGCTATCCATATCTTAATGG TGTCACGTGACTTAATTCTGTATGTCAAGTTTGTTTTGTTTTGGTATTAG GCGCTATCAAGCAACCAATTTCTCCAACCTAATCTAGATTTGGAATCTAG GAAAATGTTGAGAAAAAAAATAGTGCTTCATTGTGCCTTTGTTTCATTTT TTTTGTAATTCTAACATTTCTTTTCTGATAGTTCACACCCCTCTTATTCT GACAGAAATCTATTTTGTCGAAATTCCAAGTATTTAAACATTTATAATTT ATAAGACAGGAAACAGAAACTTTTACCATATTTTCCACAATTTTTTAAAA GCTCTTTCGTGATCTTTGAAGACAGTAGTACCCACAAGGTACTAACTGCA AATTCCAAAAATGAAATATGACCCACCACGGTACTAACCGTCATGATGTC TGGTACCAACTGCATGACCCCTCCCCCTGGAAAAAATGTTAAATGCCAAA CAGCTCTAGAATGGTTGGAGACGTTTAACTAAACGTATTTGCTATTCTTC TTCTCTTTTCATAAATCCTTGGCTTGTATTCTGTTTCATCTCCAACAAAT CATTTGATATCTTTAACTCCATCAAACTTCTATATCAATACAATTTGCAA CTGGATGATTGGTGACCTCATTGGAATTGCTGTAATGTACAATGTTATCA TTTCTCTATTTTAATTGATATTTTACTGCAAACGATTTCAAACTTTTATT GGACCTTTTTACTCATCATTTGACAAATGAATTGCTATTTTTTGCTTGTA TTTTGATAATGATCTAATCCCTAACTTTTTAAACATTGTCAACTCTATCC ATTAACTATATCCAACTGTGTGAAATATGTGGTATTATGTTCATCACATA ATGTTCAATCCAATCAAACAATGACGTCACATCCTTTATTATTTCCACTG GAACCCAAACTAAATCTACGCTATATATACAAAAATTTGGTTCCACCATG CATTATCGCCACACTTATTACTTATTTTCTGTAAAACGTGGAGATTATAA GCGGTCGAGAAGCAGCGAAAAATGAAGAGACAAGTTCCCATCGTCGTAAC AGTGCAAGTAGCAAGACGAAGGATCGTATCGAACAGTTGAAACGTTTGCT ACAAGAAGATACAAACAAAAATTCCTCAAGGTAAGATTGATTCCGCATCT CACTTCATCCTTAGAAAATGAGATGCTAAACAAACATTTGCTCTTTTTCG AACCTCAAAGACTGCCCTCGTCCTGCCAGATACTAATTTTTACCTCGAAA GAGGTCCTCTAGGAAAAAAGTGTAGTAACTATTTCTTAAGACATATGATT CTGAACTGGGATTTAAACTAGAACACTAAATTTTGTTTAAATCGTTTGTG TGCTAAAGGGACAGGAAATTTTTTTTGAGCTACAGAGCTTCGCACTATGA TTATAAAACTTTTCGGTATTGAGCAATACCATATAATTTGCATCCTTCCT AAATCTAATAATGTTGCGGAAATCTGTTCATCCTGTAATAAGGTTTTTGA CGTTAATAATTCATCCAAAAAAATCATGAAATTGAAAAATCCTTAAAAAA TTGCACTGTCAGGTGAATAATTCTCATTTTCCCTTTAGTAATAGTCGTTT ACCCTTAATGATAATTATTCGATTTGTTAATGTCAAATAGTTTAATGAAT CTTATTTCTTATTTTCCCCTTTTAAGGATTGTATTTTAACTGTTTATTCT CGAACATTTCAAACACCCTTTTGAAGCAGTTTTTTTAAGCTTTTTATTTC CGTTAAAGCAAGAAAGAAAGTTTGCGACCATATGATGTTTGTCCTTTTTC AGTCTCTTAGGCCAGGGGCCGCGACTTATTTTAAGGTTATTAAACAGAAT TTTGGCTTGATTAGTAAATTTTTTTTTGATTTGAAAAAATGTGGTTGGGC CAAGGCCCGACTGGCCCCCCGGTGTCGCGACGCCTGTAGGCTAAGTAGTA CTATTTTTTACCGGTTCCCCGAGTGTACTCCTTATCGGTATTCAGCTGTA TAGAGTTATTTGATTGTGATTATTAATATTTTTATATAATGCATGAGACA TGTTCTCGATCCTAACTTAACGAATCTGTTCGGAAGAAACCCTTGCTTAC GTTCAACGGCGCTACATCAAAATCCGCGACGAAAAGTAAATCTACCCCTC TTAATGTGGGTACCCCTTTTCTGAAAAATTCGATGAAGAAATAGGTGGAT ATAGCTTAGTGCAAGGTTTTATAGAGGTCAGTGATTATCACATTTTGTTT TCTTCTTCTTAGCTCTTCTTCAACTTCTTCTTCATCCTCTTCGTCATCGG AAAGTGAAAGTGAAAGTAATTCATCATCGGGCGAGGACTGGATCGAGAAA ACAAACTCAAAGTCAAGAAAAAGAGTATCTGATCGCAAACGTAGGAGTCA TCACAAACATTATTCATCAAAATCGAGAAAGAATCGTAAACGGTCGAGAA AATCTTCGAGTCAATCTCCAGAGAGACATTCTCGCAAGAACCTATACGAG ACTTCAGAAACAAGTCGTAAAGAAAGAGATTTTAAGTCAACTCACGAGCC TGGTGGAGCTTCAAATTTGTTAGACAATAATGCTTTAGATAAGGATGCGA AACAGATTTTACGAAAACTTAAAGACTTTTCTTCCGAGGAAATCGATATT GTTAAGAAAATGTTACGGAAAAACGAATCGGCAGAAAATACTTCGAAGGA TGATCGAAAAGTTGAAGAAAAATCGAAGGGCTATCGAGAAAGTAGACATT CACCGAGAAATTACCGTGATACTGAAAAATCAACAAGAGATTATCGATCT TCTTTGTATTCTAGTCGAAATCGAGACGATTTGAGGAGAAACGAAGATCG ATATGATCGAAAAGATGACTACAGACATTCCAAACGAGAGAAATATTCGA AACAATCGAGCTATGATCAAAGGGATTAATCATTCTTTAGGACATTTTCT TTTATAGCGTAATTTTTCATACACAAATGTATTTGAAAACTCAATTCTTG TCAGTAATAGATACTCGGTAATACATATGGATCTATAATTTTATTGGGAT GATTAGATGAACAGGCTGGGCAAGATCTTTACCGATCCAATGACAGCTCT GTTTGTTATTCTGTCAGTTTTTAAGGAGAGTAGAAATGTGTGCGTCAGAA TAATTTCGCCAAAAAAATAATGTTCAATAGCAGGCGATGGGACTATGTGG TGAAAAGAGTTGACCTACTATACTATCATGTCCCACTCGATTTTTGAAGT CTTTTCTTCGTATTAATGTGTATATTTCATCCTTTCACACGCAGCAGTAA AGACATAACAATATGAGAAATGACAACGTCTGAAGATATCCCTTAACAGT TAGTAAGTTATTTTAAGATTTTCCAAATTTGTGAAATTTAAATTCACAAT TAAAGACCTTCGCTTCAATGGCCTTTTATTATTATAGAACTTTTATCTGA GGGTGATAAAGTTAGATAAGGTCGGTTGGGCTATAATCTTAGCGTGGGTC GCGGTTAAGGGGCGGGACCAACAATTTAAACAACTTACTTCAAAGATATA AATGACAATATTCATCATAATACAATATTCTGTAGCTAACCTTCTCATAT CACCTTTCCGTCTAATTCGTACTTCGTGTTATTAACAGGTATTCTACGAT GTATCTTTTTTTGTTACTGTCAGGTTATAGCCCCTAGTATTTTCCCATCC CTCGTTCTTTTTCTTAAGTCACGTTTAACACGCTTAACATGCTTAACAAG TTTACATTTCGATGTATCTTTGGCACACCCGGTATGAATCTGTACTGTCT TCAACTAAATGGTTCGATAAAGATTGCTCTAAATTACTGATTAATGAATC ATGCATTTTAAGTAGAATTCTTTTTTCCTCTTTATTTATAGGTTGAAGTT TATTTTGAAAGTGGTTTTGTGGTATTTTATGATGGATTACATAACTGCTG GGTTGATTGCTGCCATTGGGAGAGTTGCCAAGAAAAGTGTTTCACTGTTT TACTGTTTTCACGACATGCTTTATGCGAAAGCTAAAAGATGGTATTATCA ACTTTATTTAATGACTATCTATGGGTTTCCTGTTTGGCTGATAGTTATCA AAATTGAAGTAAGGTATTCGACGCAATTTTCAGCGTTAAATACTTCCTTC TATCTTTTACCAACTCAGACCAACAAGCCACTCTTTAAACCCAAATAAAG AAAACAACGTGCAAAGGTATGCATCGTGGATTGCACATCTCTTGCCGTTT TACAATAAAAGTATCTTCAAATATCACCCTGTGCTTCATCCAAAGACAAA ATATGCAAGCTATGCAAAACATGCCTACAGCGTCTTATTTGTAGATCGAA GGTACTAGCAATGAATTTTACACATAAATGGGCTCCCGATCTTGATTTCC CGACTTTCTGTTAAACGTTCGACCTACCCCCTGATCTCAGTCAGATATAA GCTATGGCTGTTTTATTTAGGCTATAGTTGAAGGTCGTTGTGGTATCACT ATAGACAAAAATATATGACCTAGTTTTTATGTAAGACCAAATTATGTATT TGATATGAGGGAATTCTCCTCAAATCATGTAACAATTGCGTGGGGTTGAT GGAAGGTTGAAATTAAGATGTTACTGCTACTGCACTTCAGTTTGTTGCTT GGTGATCCTTTTGTTTAATACCCCAAAAAAGTTCCAAAATTTTCAACCCC CCCCCCTGGACCTTATTAGGACCCCTCCCCCCGTTTCTTAATTTTTAAGA ATATTTTCAGCTGTCAAAGAGAAGGCCCCTCATTTTATAGCCTGATTTTA GCCTATATTTACCTTACTTTTGGGTTTCAGAAGCACGATTTCCAACCCCC CGGTAATTAGTTCCCCCCGCCCGTTTATTTGGAACCTAAGAGTAAACGTC TGGTGTATTTCGGAAGATTAAGATTACGTCATGAATATCGTGAATTGTTC TATCTTGGTCGATTTTAACACTCTGAATATCAAAATCAAAAGAATCTAAT CATAGTTTATTTTTCATTCAGAGGTTGGCTCAACTATGACGTAACAGAAA GGAATTCAATCTCCATGGAAACAAGTGAATTATGCCAGGAATTTCATCGT AAGTACTGTAATAATTATATACGTTTTACCCAAAATTGAGTTTGTTTTTA TTGTTATTTCAACGTCACGCACACAGAGCAAAACGTCATAAATTTGTTCA CATTTGTGTGTGGGGGTAGCTAATTAGATATGTGGCGCAAAATTTGCCTC CGCGAAATTAATGAAATTTGCGAAAAACGATGAGTAAATCAAGGAAGTTG CTTGAATGAATGTAGGTTTTGAGTAAAGTACAGTGTCACGTTAGCCAATG ATATGATGTAGGGTGCGAGCGCCCCAAGTGGGTGACCCTAAATCTGAAAT AGCTTAATTTTGGGCAAAGTAGGTTCAAATTAACAGAAACAATTTCCCCC TTAAAATAAAAAACAGGACATTAACGATATGAAACTCACCAAAAAATAAG AATAGCCGAGGATCAACAAAAAAAAAATGTGTTCTAGGCGAAAATAAAAA AATGCATTGTTTCCGGAAGCCGGCCGGGTGAACAAAAAGTTTTTTCTGAC CCGGCCGCAGATCAATTTTTGTTTGTTAGTAGTTGATACATTAGTATTCA GGGCTTGCTTTATACTGTTTTTACATAAAAGTTATCTTTAGAGTTCTATT TCAATGATCTTAAGTTATCAAAAACAGCAACAAAAAAAATTTTCCGGCCG GCCGCATGAGAGCTTTTTTCCTTCACCCGCATTCCGGAAGCACCACACTT TTTTTTATTTTCGCCTTACGTTTAAATTTTATTGATAGCCTCAATTCGAG GACGTAAAGTGGACGTAAGTTTGTAAAAAGAATTTGACATGTTGAGTTCG TAAAAAGCCTAACTTCAGTGTCAATAAAAACAAATACATGTAGCGTGCCC TTAAGCACATTAAGTTGACCTACTATACTACCGGGTGCGCCACAAAAAAG TTTCTCTCTTTAAAACTAATTTTCTAGAAATCTAAAAATTAAAAAAAAAC TATTCTTATTTCATTGGAAAGAAGAAAGATAAACTTAAATTTTGATGGGT CATTTATTGAATTCGATTCATTAGATCAAAATTTATGCTCAATTAAATAA AAAAGTTACTTTCTGAAAGTGCTCAAAAACGTTAAAATTTTACCTATCAA ATTAAACAGAAGCATAATTACATAATACATCATTATCTTCGTTTCAGTCA TTAAAAATGATAATTAGCTGTCTAAATGACCTTTTGTTATGTAAAGGAAG GTTGTATCTCAATACAAGGAGGAACATTTGTTCAAAAAGGCCAAAAAATC TGGTAAAATTCATAAAAATCCATGAAATATGGCTTTCGAGATATATCCGG CCTTACATAAACTTTATCCAATCTAAAACCAAAAATCGGAGAAAATTTTC GGTAAAAATAAATTAAAGTGATTTTGATGAAGATTTAAACCCTTTCGGCA TTTCAGTTTCGAAATTTATGTGTTTAAATTACTGAAAAATGCTTTTAATC ATGTAAAGGCTATTGCAATTACCAATTTTAATCTAAAAATTTGATAGGTC GATTTTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNATTCAATTGAGCATAACTTTTGATCTAATGAATCGAATTC AATAAATGACCCATCAAAATTTAAGTTTATCTTTCTTCTTTCCAATGAAA TAGGAATGGTTCTTTTAAAGCTTTTAGATTCCTAGAAAATTAGTTTTAAA GAGAGAAACTTTTTTGTGGCGCACCCGGTATCATGTCCCACTCGATTTTT GAAGTCTTTTCTTCGTATTAATGTGTATATTTCATCCTTTCACACGCAGC AGTAAAGACATAACAATATGAGAAATGACAACGTCTGAAGATATCCCTTA ACAGTTAGTAAGTTATTTTAAGATTTTCCAAATTTGTGAAATTTAAATTC ACAATTAAAGACCTTCGCTTCAATGGCCTTTTATTATTATAGAACTTTTA TCTGAGGGTGATAAAGTTAGATAAGGTCGGTTGGGCTATAATCTTAGCGT GGGTCGCGGTTAAGGGGCGGGACCAACAATTTAAACAACTTACTTCAAAG ATATAAATGACAATATTCATCATAATACAATATTCTGTAGCTAACCTTCT CATATCACCTTTCCGTCTAATTCGTACTTCGTGTTATTAACAGGTATTCT ACGATGTATCTTTTTTTGTTACTGTCAGGTTATAGCCCCTAGTATTTTCC CATCCCTCGTTCTTTTTCTTAAGTCACGTTTAACACGCTTAACATGCTTA ACAAGTTTACATTTCGATGTATCTTTGGCACACCCGGTATGAATCTGTAC TGTCTTCAACTAAATGGTTCGATAAAGATTGCTCTAAATTACTGATTAAT GAATCATGCATTTTAAGTAGAATTCTTTTTTCCTCTTTATTTATAGGTTG AAGTTTATTTTGAAAGTGGTTTTGTGGTATTTTATGATGGATTACATAAC TGCTGGGTTGATTGCTGCCATTGGGAGAGTTGCCAAGAAAAGTGTTTCAC TGTTTTACTGTTTTCACGACATGCTTTATGCGAAAGCTAAAAGATGGTAT TATCAACTTTATTTAATGACTATCTATGGGTTTCCTGTTTGGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038061XLOC_038061Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060504-exon-scaffold_343-1575043694:171844..171967TCONS_00060504-exon-scaffold_343-1575043694:171844..171967Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1575043694:171202..171227TCONS_00060504-exon-scaffold_343-1575043694:171202..171227Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1575043694:170812..170995TCONS_00060504-exon-scaffold_343-1575043694:170812..170995Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1575043694:170546..170668TCONS_00060504-exon-scaffold_343-1575043694:170546..170668Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1575043694:170273..170345TCONS_00060504-exon-scaffold_343-1575043694:170273..170345Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1575043694:169821..169915TCONS_00060504-exon-scaffold_343-1575043694:169821..169915Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1575043694:168082..168113TCONS_00060504-exon-scaffold_343-1575043694:168082..168113Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1575043694:167685..167834TCONS_00060504-exon-scaffold_343-1575043694:167685..167834Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1575043694:167304..167375TCONS_00060504-exon-scaffold_343-1575043694:167304..167375Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1575043694:166756..166875TCONS_00060504-exon-scaffold_343-1575043694:166756..166875Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1575043694:166226..166348TCONS_00060504-exon-scaffold_343-1575043694:166226..166348Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1575043694:165143..165266TCONS_00060504-exon-scaffold_343-1575043694:165143..165266Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1575043694:163988..164124TCONS_00060504-exon-scaffold_343-1575043694:163988..164124Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1575043694:161766..162855TCONS_00060504-exon-scaffold_343-1575043694:161766..162855Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1575043694:157424..157621TCONS_00060504-exon-scaffold_343-1575043694:157424..157621Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1510915933:171844..171967TCONS_00060504-exon-scaffold_343-1510915933:171844..171967Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1510915933:171202..171227TCONS_00060504-exon-scaffold_343-1510915933:171202..171227Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1510915933:170812..170995TCONS_00060504-exon-scaffold_343-1510915933:170812..170995Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1510915933:170546..170668TCONS_00060504-exon-scaffold_343-1510915933:170546..170668Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1510915933:170273..170345TCONS_00060504-exon-scaffold_343-1510915933:170273..170345Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1510915933:169821..169915TCONS_00060504-exon-scaffold_343-1510915933:169821..169915Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1510915933:168082..168113TCONS_00060504-exon-scaffold_343-1510915933:168082..168113Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1510915933:167685..167834TCONS_00060504-exon-scaffold_343-1510915933:167685..167834Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1510915933:167304..167375TCONS_00060504-exon-scaffold_343-1510915933:167304..167375Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1510915933:166756..166875TCONS_00060504-exon-scaffold_343-1510915933:166756..166875Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1510915933:166226..166348TCONS_00060504-exon-scaffold_343-1510915933:166226..166348Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1510915933:165143..165266TCONS_00060504-exon-scaffold_343-1510915933:165143..165266Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1510915933:163988..164124TCONS_00060504-exon-scaffold_343-1510915933:163988..164124Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1510915933:161766..162855TCONS_00060504-exon-scaffold_343-1510915933:161766..162855Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1510915933:157424..157621TCONS_00060504-exon-scaffold_343-1510915933:157424..157621Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1491911889:171844..171967TCONS_00060504-exon-scaffold_343-1491911889:171844..171967Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1491911889:171202..171227TCONS_00060504-exon-scaffold_343-1491911889:171202..171227Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1491911889:170812..170995TCONS_00060504-exon-scaffold_343-1491911889:170812..170995Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1491911889:170546..170668TCONS_00060504-exon-scaffold_343-1491911889:170546..170668Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1491911889:170273..170345TCONS_00060504-exon-scaffold_343-1491911889:170273..170345Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1491911889:169821..169915TCONS_00060504-exon-scaffold_343-1491911889:169821..169915Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1491911889:168082..168113TCONS_00060504-exon-scaffold_343-1491911889:168082..168113Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1491911889:167685..167834TCONS_00060504-exon-scaffold_343-1491911889:167685..167834Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1491911889:167304..167375TCONS_00060504-exon-scaffold_343-1491911889:167304..167375Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1491911889:166756..166875TCONS_00060504-exon-scaffold_343-1491911889:166756..166875Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1491911889:166226..166348TCONS_00060504-exon-scaffold_343-1491911889:166226..166348Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1491911889:165143..165266TCONS_00060504-exon-scaffold_343-1491911889:165143..165266Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1491911889:163988..164124TCONS_00060504-exon-scaffold_343-1491911889:163988..164124Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1491911889:161766..162855TCONS_00060504-exon-scaffold_343-1491911889:161766..162855Clytia hemisphaericaexon
TCONS_00060504-exon-scaffold_343-1491911889:157424..157621TCONS_00060504-exon-scaffold_343-1491911889:157424..157621Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_343supercontigscaffold_343:157424..171967 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.315411 0 0.0851833 0 0.664972 8.23804e-05 0 0 0 0 0.831972 0.603654 0.0421345 0.038187 0 0.168358 0.150163 0.189409 0 0.0487745 0.100186 0 0 0 0 0 0.0974881 0 0 0
Blast
BLAST of TCONS_00060504 vs. Swiss-Prot (Human)
Match: TTC14 (Tetratricopeptide repeat protein 14 OS=Homo sapiens GN=TTC14 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 9.697e-31
Identity = 98/332 (29.52%), Postives = 169/332 (50.90%), Query Frame = 2
Query:  269 PPICLEQFMQCPSNFRKQTFFENLKINNVIIGKLAVCSASGWTVKLLGVMEGQKRWIKDLQITA----RLVITKSXXXXXXXXXXXGDLVKALVEKVDVQSKDIWLTLEPSVAAKSQYQLPKLGKIQDPDTVEYLLESREFDEENDSAYLEHIRDSSL-FNHPHGVSLLASHFNVNQDHHGFVV----CNTLKIKETALELREKQMLDWSMSMVGIGVKHFREKNLKEAKKCLDKALSFYPKNVEGFVARGALKANQSDLKGAIDDFRKALEVNPHHRNGKKYLIETSLSLARSHEKEKRWKESSKCYHEIMKHDPDHKEAKERYHQIHQIL 1237
            PP  LEQFM+ PS  R++ FF +++  +++IG+++     G+ + L+ +  G  R I  L+ITA    R V + S   D    Y+ GD+++A ++ +D   + + ++L  S        + KLG I   +   Y   S E +  +  +Y E++  SSL F +P  V  L     +++ +   ++           + A  LR+KQ   W++  V IGV +F+     +A    +KAL    +NVE  VARGAL A +  L  AI+DF  ALE  P HRN +KYL +T +      E+E+++  +   Y + +  D   K+A++   ++H+ +
Sbjct:  102 PP--LEQFMEIPSMDRRELFFRDIERGDIVIGRISSIREFGFFMVLICLGSGIMRDIAHLEITALCPLRDVPSHSNHGDPLSYYQTGDIIRAGIKDIDRYHEKLAVSLYSSSLPPHLSGI-KLGVISSEELPLYYRRSVELNSNSLESY-ENVMQSSLGFVNPGVVEFLLEKLGIDESNPPSLMRGLQSKNFSEDDFASALRKKQSASWALKCVKIGVDYFKVGRHVDAMNEYNKALEIDKQNVEALVARGALYATKGSLNKAIEDFELALENCPTHRNARKYLCQTLVERGGQLEEEEKFLNAESYYKKALALDETFKDAEDALQKLHKYM 429          
The following BLAST results are available for this feature:
BLAST of TCONS_00060504 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TTC149.697e-3129.52Tetratricopeptide repeat protein 14 OS=Homo sapien... [more]
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