TCONS_00060411 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060411
Unique NameTCONS_00060411
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1809

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060411 ID=TCONS_00060411|Name=TCONS_00060411|organism=Clytia hemisphaerica|type=transcript|length=1809bp
GGTCGCTGCGTGATGGTTAGGTTTTTCGAAAGATGACTTATTTGCGTGAT
AATACACTGTTGTTTAAAACCTCTTTAAGTTTTAAAGTAAGTTTCGATAA
GTATctctatatatatatatatgtgtATGGGGATGAGTTATAAAAGTTTA
TTCATTTACGATGCTTAGTGAAGAATATTTCCTAATGACGAGAAGGGGTT
CTTCATTTCGATAGAGCTTGTATCGCTTGTCTTAGATTCAGCTGAACTCG
CAATATTCGATTGACATGAGCGATATGAAATATTTCGATCCACTACATTC
GTCATACAATGAAAGCCTTATTGACGGTGGCCACAATGAATTCGACCAGA
AGATCAGACAGTTCTCAAAAACAATAATGGCGTGTAAAAGTTGTGGTACA
CAGGAAAACGGAACTCAACAGCGCCGACGGACCTTTCATTACACAAAACA
GCCATACCAAGAAGACTACCCTTCTACACAACACGATCAGCATGAGGTAG
ACTACCTAAAACACGAAATGGAGGAATTGCGGCGTGATAACAATCGAATG
TTTCTCGAAACCACGTATCTACggaaagaaaacaatttatatttgaaaag
actTAGGGAAGAGCATATTCTGCGGGAAAGGCTTATGCATCAGTTAGACG
AACAAAGGCATCATCAACAGAACACACAAAATTCTTACCAAGATATTGAT
TCCCTCAACTCCAAAACACTCGACTCAGATCTCATGCGAGAACAAttAAA
AGCGTACAGAGACGACTTCAACGAAGAAAAGAGGATACGCGAGCGATATT
GCAGAAGGAATGTTGAACTAGAACATGAATTAGAAGAAGCTAAACGCACC
ATGGAAATACAACAGAAGAAATTAATATGCTACGCACAGATCGTATCACA
ACCATTACACAAACTCGATGTACCTCTTATATACCCCTCATCGGGCGTCA
ATAACAAATCTCACAGCGCCTCATCATCTCCACCCTACCCGCCTTGTCCT
CAAAACAACTATAATGGGCGGACGCCACGTATCGCCCGTatagaaacaaa
gaaatatcCAGCAAGCAGTAGTGATCATATCATAGAAGCAACTCTAATGT
CAGGTGATCTTCCAACAAGGATTAAACGAGCATCTTCGATCGACTCTTGT
AAAGATGGACTAACAAATCCTTCATTATCTTCAACAACGAACACAAAAAC
TCAGAACAGTTTTACGTGGTCCTTGCATTCTTCTGATgaTGCTCCAACGA
AATACAGTTGAAGAAGCAGAACGGCAGAGAAACGGTTGTTTTTGGAAGTA
ACACATCAGAGGACAAATTGCTTGTGCATTCCCAATAAGGTGGTTCAAAT
AACTACAGCGTACGGGAAAGTGTGCAGAAGGTTTCTGAGACGGAAAGTTA
TCAAGGGGTGATACATTCCTCAGATATCATGATAGCGAGCAATTCAATAA
CGCCTCTTTGAATACCATAACAGAAGCTCGCactttccaaaaagaaaagt
cGAAATCCTTGTGGTTGCGATGAATCAGACACAAAGAAACATGACCAGAA
CGCATCGATTTGATGGTTTTGCCGTCACAAGGATACACCTCTGTTTGTCG
GGTTGAAACTTACAAAGTTCGCCCAGCGCGTACATTTAAGATTATACCAG
AGTTGTTTTTATCGTGAGTTTTTGTTCATATCAATGTTAATTTTATATTC
TGTCATTAATTATTTTACTGGTCTTTGAGCAGACTAAGTATAGTATattg
ttttgtatcatattgaACTTGTACATAGATTATTGTATCggaagaaattt
taaaagctt
Run BLAST on NCBI

transcript from alignment at scaffold_341:178495..191876-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060411 ID=TCONS_00060411|Name=TCONS_00060411|organism=Clytia hemisphaerica|type=transcript|length=13382bp|location=Sequence derived from alignment at scaffold_341:178495..191876- (Clytia hemisphaerica)
GGTCGCTGCGTGATGGTTAGGTTTTTCGAAAGATGACTTATTTGCGTGAT
AATACACTGTTGTTTAAAACCTCTTTAAGTTTTAAAGTAAGTTTCGATAA
GTATCTCTATATATATATATATGTGTATGGGGATGAGTTATAAAAGTTTA
TTCATTTACGATGCTTAGTGAAGAATATTTCCTAATGACGAGAAGGGGTT
CTTCATTTCGATAGAGCTTGTATCGCTTGTCTTAGATTCAGCTGAACTCG
GTAAGTTTGGTTTTCTTATCCACCAATGTTTTGTTGGAGAAAGCTTTTAA
AAAATCGATTTTGTGAAACATCCGAGAGAAATCAAACTTATAGTGTTTTT
GAGAAAAGTACGGAGAGGAAAATGGGTTGTATGTAAATTTGGTATAGTGG
AAAAGATTTTGAAGGATTTAACGAAATGTTATCTTCATCACATGGAAAAG
CTTCTAATCAACACACTTTTCCATGACCTCTGCTATATAATTTGCTGTGC
TGAGCTAATTACATAGGAGATTAGAGATTACATTTGAGAACTTGAAATGA
CATCTGAGTGTTTTGCTGACCCCGTGTTTATTCACTGAGAGCGGAACAAT
TTTTTGTGGATACGATTTTGATCCTTAGAAGCAAGCAGGATTGAAATCAG
ATTTTTAAAAGGAGGAAGCATAGTTTGTCTATTGTCAGCAACGAAAAAAG
TTTCCTTTTGTTTTCGAATAAAAAGAAAATTCTTTTTCTATAAAGTCACT
ACTAGAAACTAAGCAGCAACGTATTTCGAAACTCTCATATTTTATCTGAT
CTGAATAAATAATATAATAGAAAACGAAAGGAATGTTACTACCAGGGGAG
CGCGAGTTTTCATCCATTGAAACGGACAGACAAAGAGAAATATATACTTT
CGAGTCTTCGCTTTCGAATCGAAAGATCCTCTGGTGGAAATATTTTGGTT
TCATGCAAACATCATAGAGAATCATAGAAAGAAGTTTTATTTTCTTGTTC
GATGTGGTTGAAGTTGATGGAATAAGGTAACGTAACATTTGGGGTAAAAT
GAATATATATTCCTTTTTATCATTTTTATGAAAAATTCTTTTGTGTATAG
TGCTTGCTGGGATATAGGAGCGTGTAAAGGTTCTTGGGAAGATTTTTCAA
AAAATGAGTGATCAAAAACATCAATGATTACCGAGTTGAATTCGTCAAAA
GTATTTTATTATGAGAAACGCCTAAATCTGGAGACTTAAAAACCTGTCGT
ATAATGGTATATTTTATTTTTCATAACTTACGGTATGAAAATATAAATTG
CTTAAAGAGGCCCAAAAGGTTTTCGTGATGGCGTGATTGGCGTTTTTTCA
AGTTCGTGGGTTTCGTGATTTAAGATTTTAAATTGTGTGATTGCGTGATA
AAGTTTTATTCGATTAAAATGATTGACTTTGATATTCATCCTAAAGTTAT
GTGTTTGTATGATAAAACTCCAAATTCACCGACGCTATTATACTTCAAAA
CATACTTTAAATCCTTTACTTTCGAAAGAAGATGAGCTTAATAATCTTTA
GAAAGTTTAACATCATTTCAGTCCTGGTCCAGACAGATAAACAGACAAAC
CAAAGTTTTGCTATATCTCTATACTATATCTTTTTATAAGAACGGTGTTT
TTCCATTTCACTATGGATATTCGTAACTTCTTGGGAATGAAAATTATCCT
TAAATATTCTACCCGTATTCTTAGTTCAGATCAAAATTCAACCTATAAAT
TTTACACGAACACTTTTAGCATAAAAGCTATTATTTAGGGATCACGAAAA
TCCCAAAAATGATATATTTTTCCCCAATTCTCAAAATCTCAATTAACTCC
CACCATCTTAAAAGTTTAATACCAATATTTTTAGTCTCTTTAAAACTTGT
AGGAACCATTAAGTGTTTGTTCTGCAGTTTTATAACCATTTCACACTCTC
TTCGTTATATTGCCTAGTTGCGTGACTTTGAAATCTTCCCGTTCAGTAAG
TGCGTATTTCAAGAAAACAATGAGATGAGAAAACTTCCAATCGCGTGCCT
TCGAAGGCAATTAAGTTATTTAAGTTGAATATAAAGTATAGTGCAATTTT
CATTGCACTTTATTTTAAATCTGGCTTCTTCCCAGCACTGACGGAAACAC
AACAGTTTTCAATGCTCACTTAATAACACAAATAAGAGAGATATGTCTTG
AAATCCAGAGGAGTTAATGTAGTCACAGTTTTTAAATAGAAAATGTGAAA
CATACCAACGAATAAACTAAAAGATGGAAAGGAAAGGAAAACAATTTTTG
TGAACGAAAAACTGATGTAAGGCGAGTTTACAACAATAGATTTTGACAAC
TGATGATAACCCTGTTTCAATTGTAATTTCAATCTCTGTTTTCCTTCTTT
TCAGCAATATTCGATTGACATGAGCGATATGAAATATTTCGATCCACTAC
ATTCGTCATACAATGAAAGCCTTATTGACGGTGGCCACAATGAATTCGAC
CAGAAGATCAGACAGGTTGGTACAGCTTACAATCTCTTTTATACATCCAT
TCATAAATGATCCGTATAATTTGCGGACAAGAAATTCTATTTCATTGGTC
CATTTAAGGAACTTTATTGGTACCTTTGGATTTTGAATCCCTAGTTTCTT
TAATTGAAAATCATTTTCAAATTTATGAAGAAGATGATCATTTAAATATT
TCGATATTTAATTTGAGAAAGATGTTTCAGCTTACAGGAGACACCAGTTC
TTCCCTTGACAAGCATTCATAATTTCTCTTTTATTTGACACTATTAAACC
TAGACCAACATTCTCATATACAACAACACAGCCGACTTACAAAACTTTAG
AATTTACTTTGCGTACTCGCAAACTGCAAAAAGAGGCTTCTGGTGGTCGC
AACCGAAAATGCTAAAATAAATAAGCAACATTGCACAATCGTGAAATATT
TGGTGTTAGGGAAATTTAGTCTCCGATTGTCTTTTTACTTCTAGTTGCGG
CTTACAACGCGGTGAGGGCCTCTTCAGTTTTTCCAAATTTTTTGGTATTA
TGTCTTTTAAATGCCTCTTGACTCGAAAGTAGAACAATGAAAAGGCTGGC
TGCCAGTAGATATTTTCTGTGGTGAAGCTGGAATTATTTTTTAACATATG
ATAAATATAGAATAATGTAGTTGATACTTCATTTGATGTTAAGATTATCC
ACAAAGTTGCAGGGGGGTTGGGGGTGATTCGCAAATGTGTCTTTCACACA
GCTCGAAAACCTCTTACAAGCGCTACAAAAATATACTTTTTCTCTAAAAG
ATCCAAAAGTTCGTTTTTGACGAGAAGTTTGGAAAATTTCACAACGCTTC
AAAAATCAGGTAAATTACTCAATATTTACGCCCCAGGATGGCAAGTAAAC
CCGGGGTTAAAGGATCCAACACAATTTTCATATCGTTTTGAATCACTTTC
ATTTCCAAAAATAAGCAAAATTGTCAAGGCCTTTTTTCATGATCACTCCT
AGACGGCGCTAAAAGCCACTCGGATAGTCTACAATTCTGTTTGATTTTTT
CTCCAATAAGTCAGTGAAAGTTTATTTATATTTGTGATTTGTCAATAAAC
GGTTTTCAGACCAAGGCTGTCTCTACCTATTGGTTCCTAAAGATTTCTGC
GATAAAACTCAGTGACTAGTGAAATTATAACAATATCAAATACACCCCCT
TCTCACAGACCCATCGTACTACAACTCGATGAGGACTGATTAACGATATT
TTTATGACTGGGATTTAAATTCCATTTTTTTCAAGTCAAAAAATTCAGTG
GGGATAAAGAAAATCTTTCCAGTGGGAAGGGTGTTCAAATAGGAACTTTT
GCTCAATGCACAAAAAATCAGTATGAAGTTTGATGCAGGTGCTTGAACCT
TGACCACATGAAGTTTCATGAGGAACACAATCAAAAATACCATTGAACTT
GGTCGATACATATTAGCCTTTTATCAAGCAGCCCTTATAGGCTATTGTTG
TTTTTACAGCTACATCTTAAGCTATTCTAAACATTATCAAAAGGTCTGAG
AAAGGTCATCTAAATCATAATTGAGAGGTCAATCACGTGGTCAAGGTTCC
TTTACTCTAAATTACAGTTAATTTTAAGGTATTCAAGAATTTCCTTCCCT
TTTCTTGTAATTGCCTCTTTCATAAATAGCCACGAGATCGTAAAGATAAA
ATTGCGGAAGGTTGCACCAACCAACTGAAAGGTCAACTTAAAGTTAGTTT
CTAACGGAATAATTTTCTTCTGTGGCATTTTTCCCTTCAACCTTTTGAAC
TTGAGGAACATTTAACGGCTAATCTATCATTATTTAGAATTGAATGCCCA
TGTAATTGACCCCTTGATTGTATAGTTACTGTCAAAAACAAGACTTACTA
TGTAGATGATAGANTCCATGTAATTGACTCCTTGATTGTATAGTTACTGT
CAAAAACAAGACTTACTATGTAGATGATAGAGGATCATGCAAAAAAGTTT
TTTGATATGAAATTTGTTCGGAGATAATTCAGTGAGATTTAGCAATTTAA
TGGGGACAATATCATGTGTAGAAGAAAAGTAACGTAGGGAGGATTTGATT
GTTAGGGACTAGGGAAAATTTTATAGCAGATATATATTCATTGTGTGGGT
AAGAGGGCAGATGTAATAGATTTCGTTGTCATTGGGACGAAAATAATTTT
CAACTGTGTAGATGGCCTAAATATGTATAGCTTGAAATATGAAATCAGCA
TTATTGAACTATGTTTAAATATACACCTTTAAAATTTCACATGGATTTTC
AAGGGATAAAATGTTGGAACTTTTCGTATACGTGAAAAAGACAGATTTTT
GTGGGTTGTGAGAAAAGATTCAAAAGCGTAATCGAAATTCAAGCATCGCA
CTTTTAGTATTTTCATATTTCACAGGATTTGCCTTTTAGGACATCTTCTT
TCTTTTACACCACTACTATAAATCAACTTTTTATGGCTGAGAACTCTTTT
CCGAAGTTGATGGCGAATGAAAAACAATCATTTCTTTCTTGAAGGAACAT
TTGCACAGATTTGTGTAATTATCCCCTGTACATTGATTAGAATAGAATGT
AACAGATGATGAAATAACCTAACAATTAGGACACTTGTTCACTTATGTTG
AACTTGTTATTCTACTGTATCAGAGTTACGTGTAACCCAGCAAACACACA
ACGTTGTTTTAACGTTCAATTTACGTTATTTGGACGTTATGAATGCCAAA
TGGACGTTGATACGACGTCGAGTGCCGGCTGGGAAGGGTCGTAAAGAAAT
TCCAGGTCCACTACACGGGTAAAAATGAGTGATACTGACATTTTAGGGGA
AGGTTCATTTCTCGATAGAATACAACCAGAGGGGTAAATGTGAGATTGAG
AGAGATAAAAAGGATTAACGAAAAATAGTTTCTGTTCCTTGACGATAACA
CGTTTCAGTTACTGTGGTTTTCACTCTCTAAATTCATTTTTTCCATGTAC
AGCTTGCGAAAGTGGGAAAAATATTGAAGGAGATGAAATGTTTTATACGT
GCGATCATCTTATTTACTTGGAAAGCTTTTTTCCAACGTTAGATGGATGT
TATTTTAACGTTGGGGGATTTTAGATTACATCTATTCTTGATATTCATGA
CGTAATCTTTTATACGGAAATACCTGAAAAACACCGGGCGTTTGCCACCA
GTCTTGAATTAAAACAATGAAACTGGTAGCAAACGCCCGGTGTTTTTCGT
GTGTTTCCGTATGAAATATTATGTCATGAATATCAAGAATTGTTTTGTTG
TTTTGCAGTTTGAAATGGAAGGCGGATACTTAGGCAAAGACGGGTGCCGG
GTATGTGCAGACAATAAGGGCCTGTTTTTTCACCTTCCAAAGTCTCTCTA
AACAGAAAATTTCAAAGAAACTCCTCTAAGGGTCAGAAGACTCACGATAA
TTTAAGAAAACATTTTTGATTTTGAGAGAAAAATTTGTAAAAAAGTCTCT
CTAAGAGTCGGTTTTTGTTGGTCCCGCACACACCCCTCATACGCCAACCC
TAGTACCCTTCCGGGGGTTTTCTCAAACTTAAAGTAACGTTGGCTGTTAA
TAAAAGTTCAGTACATTATAGTTTCATTGAGGGATAAAATTTGAGAATTT
TTCTCTCGCCAGGGAAGACATTTTGGTAAATCTTTTACAATATTGGAGAC
ATTTCGTGGTTTTGTTTCTCTAGTAGTTTCAGACTGGATTAATATTTAAA
TTTATAAAATGAAAAGATAAAATGAAAATTCNAATATTGGAGATATTTCG
TGGTTTTGTTTCTCTAGTAGTTTCAGACTGGATTAATATTTAAATTTATA
AAATGAAAAGATAAAATGAAAATTCTGAGAATTTAGCATATTTTGAACGT
CATCGAAAGAGTAGAAAGAAAAATGAAACAAAAGAAAGGCGAAGACAATA
ACAATGAAATGAAGTTGCTGTGTCACAGTACAAAAGATGCTGTTCTTCTT
AAGATACGTAGTTTTGTAACTATAATTTCTCACTAAAAAAGCTTTTGATT
GATAAAGTGAAGTGAACAGTAGAAGCCTTGAGGATTTTAGCAAAGCCTTA
TTTCCTTTTTTTAGAAACAGCGTTATTTAGTGCTTGCTAATTTGAAAGAG
AAGAATATCAAGGGAGCGTTATATTTGATGAAAAGTTAAAAGAAACAGTC
ATGGAAAGTAAAATATTGGACTAAAAAAATTAAGAAGAAGATTAATATTC
TCTTATTTACTTGTTACACTTTGAGGGTATTTGTTCTATTGAAACTTCAC
TTTTTTTGGAATTGAGAGAAACGCAAATTTCGGCCGTTAAACATCGAACA
ATGAAATCAAGAAATAAAGTTCTAAGGGACACGTTGTATACCGCTGTTGT
TGTAGGTATATTTACGAGAAGAAGACTGAGAAGTAGAAAAAGTTTGGCTT
GGCTGTTATAGAGTTAAACATTTCATCTTTTTTTATCCTTAATTCTTTTT
ACTTAAAAAAGAACTTAGAGTTGCCAAGGTAGGCAAAGAAGATACATCGT
TTGAGGGGCTGTTTTTATTATGGTGGCCCGGTTTACGTCACAGTCTTTGA
CAAATCAAATGGCTAGAAATAGATCACGTGACGGTCGAAAATTATCGCAC
AACACCTAGCATGAACATTCCCTTATTCAAGAATAGTGAAGCGAGTTTTC
TGTTCTGAAATTTGACATAGTTGACAGTTCCCATCTCATTTTTTTCTGTT
TCTGGGATAGAGCCATACGGTTTAAAAAAAGTGAAAAAACAAAACAGATA
TTGCAAAACGGTAGGTTGAGGGAAAGATAGCGTCATAGGATTTCAGAGTT
TTATCCCCGTGAAATACAAAAGTAAAATCTGGTAGAATCTTCGAGAATTT
GATCAACTTTTTGATGATTTTCGTTCATGTCGACATAATCATGGTTCCAC
GGTGTAAACAGATTTCTCCAATTCAGGAAAATCTTACTATTTATTGTCGC
TCTTATCAGATTATCTTTCTTCTTTTTCAAGCCTAACAGGAGCTTGGCTC
ATTTTGATATATTTTCGGATCAACCCCAAGTTATCTCATTTCTTATTATT
CTTTCTAGTTCTCAAAAACAATAATGGCGTGTAAAAGTTGTGGTACACAG
GAAAACGGAACTCAACAGCGCCGACGGACCTTTCATTACACAAAACAGCC
ATACCAAGAAGACTACCCTTCTACACAACACGATCAGCATGAGGTAGACT
ACCTAAAACACGAAATGGAGGAATTGCGGCGTGATAACAATCGAATGTTT
CTCGAAACCACGTATCTACGGAAAGAAAACAATTTATATTTGAAAAGACT
TAGGGAAGAGCATATTCTGCGGGAAAGGTGAATTGATTTGTTAATTCATT
TTATGGAAATATTCTTTGAGATTTGTGACTTTCGTCAATGACAATGTGAC
AGAAATCAACTCAATATTAAAACCAAAAAAGCTTATACCCTGCCATCCCC
ATTGACTAATACATTATACCTGTGCAACGATNAAGCTTATACCCTGTCAC
CCATTTGCACTTCTTATCCCCATTGACTAATACATTATACCTGTGCAACG
ATGAGACAGGAGTATTATATAAACTTCTCTTTTACAGGCTTATGCATCAG
TTAGACGAACAAAGGCATCATCAACAGAACACACAAAATTCTTACCAAGA
TATTGATTCCCTCAACTCCAAAACACTCGACTCAGATCTCATGCGAGAAC
AAGTAAGGCTTAAATATAATCTGATTTGAAAATACTCAAAGGGTTTTTAC
TATTTGTCATTTGGGAAATCCCCCATGAACCACAAGTGAAAATTAAGACA
AAACTGTTTTGATTGTCTGTAGGCTATTTGTATAATTATGATGTGAGCGA
ACGTACACCTAAGGAGCCTAGGCTGCTGGGAAGGTCTGAGACAAAAGTCA
CTCCCACCTTCTAACTGGAAGGCTACAGTAATCTGTAGATGGATTTGTAA
GGAAGGTTACATAAATGTTCGACGAAGTACATTGAGTACTGAGAACGTAT
CCTCCCTTCAGAATGGTCCATGACTGGCTACTTGAGTGCGATTGGTGTAG
CAACATTCCATTGGTGCAATGTTGTAACTCAATTCAGACTACTCTCGATC
ACAAAATATTTTCATATTCAATATTTGAATTTTATTCATTTTGACGTTTA
CAAAAAAGCTCACTTTTAGGGTCAACCTGGAGTTTTTAGAAGGTTTTCGA
TGATTCGGTTGATGGTTGAATCTTGAGACAAAGGATTTTATTACTTTTTC
TAAAGAACGCGTCATCTCTATTATTTTAAATGACCAATTAGTGAAGTATC
TTATAAAAACTCCAGCTCATCCCAATAAACTCCCATGCTGACAAAATGAC
AGTCATCTACATAAATTTATTCTTGTAAGACGGCTACAATTTACAGTCAA
AGAACCCTTTTCGTAAACATTCTCAGAGGTTTAATTGGTTTTACACCTCA
CTGTCTGTTCTTGAAATAGCCACTGTTATTAAAACAAAGTTACCTTAATC
TTTTTACTCGTATCTGACGGTATTTGCTTGTTTTTTTTGTTTTTTTTTGG
GGGGGGGGNCCTAAGGTATGTTGAAACTTAATCTCAACCAATTTCGAGAG
AAAATATAAGAAAGTTGTTGGACAGCAAAAAGTATGGTGTAGCAGTGAAG
ATTCAAGTATAGTCAAAATGTGTATTGTTTTTAATTTTCTTTCTTTTAGT
TAAAAGCGTACAGAGACGACTTCAACGAAGAAAAGAGGATACGCGAGCGA
TATTGCAGAAGGAATGTTGAACTAGAACATGAATTAGAAGAAGCTAAACG
CACCATGGAAATACAACAGAAGAAAGTAAGTTCAAATTTGAAGCACGTGC
GTGAGATATTGATATTTTTGTCCTTGTAAAGTATTATTTCAAAGAATCTT
GGAAAAACTCAACAAGAAAAAACTAGAATTTTACCATTTAATGAAAAAAC
ACTTCCTCTTTCAAAACTTTCAGTTAATATGCTACGCACAGATCGTATCA
CAACCATTACACAAACTCGATGTACCTCTTATATACCCCTCATCGGGCGT
CAATAACAAATCTCACAGCGCCTCATCATCTCCACCCTACCCGCCTTGTC
CTCAAAACAACTATAATGGGCGGACGCCACGTATCGCCCGTATAGAAACA
AAGAAATATCCAGCAAGCAGTAGTGATCATATCATAGAAGCAACTCTAAT
GTCAGGTGATCTTCCAACAAGGATTAAACGAGCATCTTCGATCGACTCTT
GTAAAGATGGACTAACAAATCCTTCATTATCTTCAACAACGAACACAAAA
ACTCAGAACAGTTTTACGTGGTCCTTGCATTCTTCTGATGTAAGTAAAAA
TAATTATCAATAGTTCCTAAATTCCAAAGAGAAAACCTTTACGAACAGCC
TTACTAAATTTTGTTTACAACAACTTTACTAATAAACGAAGAGTGATTAA
AGACCATCTTTTTTCTTTATTAATTTCGCCTTAGCGAAAGTATTACGATA
GGCATTCAGCGGCGGTGTCCTCGGACGAAAATTTAGAAAACGAAAGTACT
CGATACGGTGGACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNCGCACAATATGAGCATATTTATTTTTCTTATA
AGCATATATTTTATAAGAATCAAATCAATAACTCTTGATAGACTGTGATA
TACCTTTCGGTAATTAGTTCTTACAAAGTAAACAATAGATGGCAGGCAAC
ATGAGCATATTTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTA
CAAAGTAAACAAGGGATGGCGCACAATATGAGCATATTTATTTTTCTTAT
AAGCATATATTTTATAAGAATCAAATCAATAACTCTTGATAGACTGTGAT
ACACCCTTCGGTAATTAGTTCTTACAAAGTAAACAATAGATGGCAGGCAA
CATGAGCATATTTATTTTTCTTATAAGCATACACTTTATAAGAATCAAAT
CGATAACTCTTGATAGACTGTGATATACCTTTCGGTAGTTAGTTCTTACA
AAGTAAATAAGGGATGGCGCACAATATGAGCATATTTATTTTTTTTATAA
GCATATATTTTATAAGAATCAAATCAATAACTCTTGATAGACTGTGATAT
ACCTTTCGGTAATTAGTTCTTACAAAGTAAACAAGGGTTGGCGCACAATA
TGAGCATATTTATTTTTCTTATAAACATATATTTTATAAGAATCACATCA
ATAACTCTTGATAGACTGTGATATACCTTTCGGTAATTAGTTCTTACAAA
GTAAACAAGGGATGAGGCACAATATGAGCATATTTATTTTTCTTATAAAC
ATATATTTTATAAGAATCAAATCAATAGCTCTTGATAGACGGTGATATAC
CTTTTGGTAATTAGTTCTTACAAAGTAAACAAGGGTTGGCGCACAATATG
AGCATATTTATTTTTCTTATAAACATATATTTTATAAGAATCACATCAAT
AACTCTTGATAGACTGTGATATACCTTTCGGTAATTAGTTCTTACAAAGT
AAACAATAGATGGCAGACAATATAAGCATATTGATTTTTCCTATAAGCAT
ATACTTTATAAGAATCAAATCAGTAACTCTTGATAGACGGTGATACACCC
TTCGGTAATTAGTTCTTACAAAGTANTAGTAAACAAGGGATGGCGCACAA
TATGAGCATATTTATTATCTATTACCTTTCGGTAATTAGTTCTTACAAAG
TAAACAAGGGATGGCGCACAATATGAGCATATTTATTTTTCTTATAAGCA
TATATTTTATAAGAATCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNGTCACTTGGCCAAGATTTCGTCACTTTTCCCCGACGAAGTTT
TCCCTGATAAGGTTTTTTTTTCTATAAGAATCAAATTAATAACTCTTTAT
AGATGGTGATTTTCCCTTCAGTTATTAGTTCTTAAGAATTAAACAACCAT
TGTTCGTAAATTGATCTTATCTTTTTAGCGATTTTGAGGCTTGATGTAAA
GTAGACTTCAGATTAGCTTTCATTTCTAGTTCTTGTTTTTTCCCATGCAG
TTTAAACTTTAGGCGAAATTTTCGACTTCAAGTCGTCTTGTTTTCTTTTA
CTTTAATGGGATAAATTAACGCGGGGATTAAATTTCGTGGATTTCGTGGA
TTCGGGTGTCATCCGTGAGATTAAGTCCAAATGGGAATCTGGAAAAATCT
TATCCTTATCGTTTTGAAAATAAAATTTTTGTCCATTTCATTTTTTGCGG
TTAAAATAGAATGTCATTAAAATTGACGTGTTTTGAGAATCATTTTAATT
TCAATTTCAGGATGCTCCAACGAAATACAGTTGAAGAAGCAGAACGGCAG
AGAAACGGTTGTTTTTGGAAGTAACACATCAGAGGACAAATTGCTTGTGC
ATTCCCAATAAGGTGGTTCAAATAACTACAGCGTACGGGAAAGTGTGCAG
AAGGTTTCTGAGACGGAAAGTTATCAAGGGGTGATACATTCCTCAGATAT
CATGATAGCGAGCAATTCAATAACGCCTCTTTGAATACCATAACAGAAGC
TCGCACTTTCCAAAAAGAAAAGTCGAAATCCTTGTGGTTGCGATGAATCA
GACACAAAGAAACATGACCAGAACGCATCGATTTGATGGTTTTGCCGTCA
CAAGGATACACCTCTGTTTGTCGGGTTGAAACTTACAAAGTTCGCCCAGC
GCGTACATTTAAGATTATACCAGAGTTGTTTTTATCGTGAGTTTTTGTTC
ATATCAATGTTAATTTTATATTCTGTCATTAATTATTTTACTGGTCTTTG
AGCAGACTAAGTATAGTATATTGTTTTGTATCATATTGAACTTGTACATA
GATTATTGTATCGGAAGAAATTTTAAAAGCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037997XLOC_037997Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060411-exon-scaffold_341-1575043694:191627..191876TCONS_00060411-exon-scaffold_341-1575043694:191627..191876Clytia hemisphaericaexon
TCONS_00060411-exon-scaffold_341-1575043694:189362..189472TCONS_00060411-exon-scaffold_341-1575043694:189362..189472Clytia hemisphaericaexon
TCONS_00060411-exon-scaffold_341-1575043694:184000..184268TCONS_00060411-exon-scaffold_341-1575043694:184000..184268Clytia hemisphaericaexon
TCONS_00060411-exon-scaffold_341-1575043694:183625..183739TCONS_00060411-exon-scaffold_341-1575043694:183625..183739Clytia hemisphaericaexon
TCONS_00060411-exon-scaffold_341-1575043694:182502..182627TCONS_00060411-exon-scaffold_341-1575043694:182502..182627Clytia hemisphaericaexon
TCONS_00060411-exon-scaffold_341-1575043694:181988..182353TCONS_00060411-exon-scaffold_341-1575043694:181988..182353Clytia hemisphaericaexon
TCONS_00060411-exon-scaffold_341-1575043694:178495..179066TCONS_00060411-exon-scaffold_341-1575043694:178495..179066Clytia hemisphaericaexon
TCONS_00060411-exon-scaffold_341-1510915933:191627..191876TCONS_00060411-exon-scaffold_341-1510915933:191627..191876Clytia hemisphaericaexon
TCONS_00060411-exon-scaffold_341-1510915933:189362..189472TCONS_00060411-exon-scaffold_341-1510915933:189362..189472Clytia hemisphaericaexon
TCONS_00060411-exon-scaffold_341-1510915933:184000..184268TCONS_00060411-exon-scaffold_341-1510915933:184000..184268Clytia hemisphaericaexon
TCONS_00060411-exon-scaffold_341-1510915933:183625..183739TCONS_00060411-exon-scaffold_341-1510915933:183625..183739Clytia hemisphaericaexon
TCONS_00060411-exon-scaffold_341-1510915933:182502..182627TCONS_00060411-exon-scaffold_341-1510915933:182502..182627Clytia hemisphaericaexon
TCONS_00060411-exon-scaffold_341-1510915933:181988..182353TCONS_00060411-exon-scaffold_341-1510915933:181988..182353Clytia hemisphaericaexon
TCONS_00060411-exon-scaffold_341-1510915933:178495..179066TCONS_00060411-exon-scaffold_341-1510915933:178495..179066Clytia hemisphaericaexon
TCONS_00060411-exon-scaffold_341-1491911889:191627..191876TCONS_00060411-exon-scaffold_341-1491911889:191627..191876Clytia hemisphaericaexon
TCONS_00060411-exon-scaffold_341-1491911889:189362..189472TCONS_00060411-exon-scaffold_341-1491911889:189362..189472Clytia hemisphaericaexon
TCONS_00060411-exon-scaffold_341-1491911889:184000..184268TCONS_00060411-exon-scaffold_341-1491911889:184000..184268Clytia hemisphaericaexon
TCONS_00060411-exon-scaffold_341-1491911889:183625..183739TCONS_00060411-exon-scaffold_341-1491911889:183625..183739Clytia hemisphaericaexon
TCONS_00060411-exon-scaffold_341-1491911889:182502..182627TCONS_00060411-exon-scaffold_341-1491911889:182502..182627Clytia hemisphaericaexon
TCONS_00060411-exon-scaffold_341-1491911889:181988..182353TCONS_00060411-exon-scaffold_341-1491911889:181988..182353Clytia hemisphaericaexon
TCONS_00060411-exon-scaffold_341-1491911889:178495..179066TCONS_00060411-exon-scaffold_341-1491911889:178495..179066Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_341supercontigscaffold_341:178495..191876 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0.42442	0	2.37513	0.152788	0.355055	0.959357	3.34825	2.33206	0	1.28932	0	0.738522	2.84303	5.24904	1.55095	2.66627	1.57598	3.62019	3.11072	1.6843
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060411 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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