TCONS_00060396 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00060396
Unique Name	TCONS_00060396
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3570

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_341:309522..325216+

transcript sequence

>TCONS_00060396 ID=TCONS_00060396|Name=TCONS_00060396|organism=Clytia hemisphaerica|type=transcript|length=3570bp
ATTGTTCTTGTCCTCTTGATTCTCATCTCAATCACCCTCGTCCTCGTTTT
CACACTAGCCCTCAAAAAAGACAaagaattGAGTTCGGAAACGTTGATCA
GTCCAAACAGACGATTTACATTAGACGAAGTTTTTCTAAGGAAATATACA
CCACGCACTGCAAGCATTTATTGGGTGTCAGATGACAATTACTTAGATTT
TTCGGACGGCATTGTCCGAAAATCGATCACCAATTCAACTTACTCTGATC
GGATTCTCACACGACAAGAAATGGTTGACAATAGAATCAGTCGTTCACTA
GCCAGACTTTCGCCAGATAATAAATGGGTTTTACTAGCCAACAATACTAA
AAAGCTATATCGACATTCCTTCTACGCTGACTATTATGTAAAAGAGAGAT
CTACAAATAGagtaATCAAACTACATAGCCCGGACGGAGATTCGGATGAG
CAGATACGACTTTGTACTTGGGCAAACAATGGAAGTGCTATTGTTTTCGT
CTACAAATGCAATGTGTATTACATTGCGACTTTGGAAACAGAAGACATCA
AGTATTACCAGTTAACAACCAGTGGTGTTCCCAAATCTGTTTTCAATGGC
GTTCCTGATTGGGTTTACGAAGaGGAGCTGTTGTTTTCTGGGAAAGCTTT
GGAGGTTTCAGCTGATGGCAAATATCTCTCTTACGTCAAATTCAACGCGA
ACCAATCGTATTTTAGTTATGCCATTTATGGTCACCCAAGTAAAAGCTAC
CCAGATATCGATCGAATCGCTTATCCGAAGGCTGGTTTTCCGAACCCAAC
CAtcgaaatcaaaatcatcaatcTGCAGAGTGTCTTGCAAGAAGATAata
gtgtcaaaaatttcacCCAATATAAAAAGATCCTAAGTCCACctgctaaa
atctcaaaaggTGATTATTATTATTGCATTATGACTTGGAGTCCTGGGAA
CGAGTTGTATGTCCAATGGATGAACCGTGCTCAAAACGAGACTGTTTGTA
TGAAGTACGATTCGACAAACGGACAACCAACAACTCTTCAAGAATACAAT
ACACCAGGTGGATGGATAGACGATGATTACACCAAACCAAAGTTTGCCAA
AGACAATTCCAATTATATCACGCTATTGCCACACGAAGATTTTCGACATT
TGGCTAAAGTCTCGATGAATCCCaagAATGGCCCTGAAGTGGAGTTTTTG
ACGGATGGAAAATTCATGGTTGTGGATATCAACTGTTACAACGCGGATGA
TCAAATTTTatattaTCGAAGCACCCAAGAATCTCCTGCACAACGTCATG
TCTATCGAATCAATTTACAAACCAAAGAAAACAGTTGTATCACTTGTGAC
TTGTTGAAAGACAGTGATGGCACCAAATGTACATATCACGATATTGTCTT
CAGCAAGAAGTGTACGTATGCAACCATCAACTGCAAAGGACCTTACGTAC
CCGTATCTTACATGGTCAATATGGAAACAATGAACGTACAAAACCTAACG
TCTAATGAACATGTTAAAGACTTATTAAGTAGGAAAGCGTTACCGACAGA
GAAATTTTATACTATAAAATCTGATGGGTGGGATATTCACGTTAAAGAGA
CACGCCCTGCGGGATTTGACCCCAAGAAGAAATATCCGGTGTTGTTGAGT
GTTTATGGTGGTCCAAGCACGCAAAAgGTGACAGATCGGTACAGTTACGG
ATTCGATCACTTTTTGGTATCTTCGCATGATATTATTCTCATTAACTTCG
ATGCTAGAGGAGCTGGTTACTATGGTTACAAGTTTATGTACGCAGTCTAC
AAACAACTTGGTCATTATGAAGCCGTCGATGCCGTTAACGTTGGCAAGTA
CTTAAAAACACAACCTTACGTTGACCCAAAGAAAATCGCTATTTGGGGCT
GGTCGTATGGAGGATTCTATTCATCAACTGTGATGGGAATGGACAGTGAC
GTCATCACGACGGCCGTTGCTGTTGCTCCAGTGACTGATTGGCGTTACTA
TGATACTGTTTACACTGAAAGATATATGGGACTGCCTACACCAGAAGATA
ATATTGCTGGGTATCAGAGTACGAGTGTCTTGAGCATGACAAAGAACTTC
AGAGGGAAGAACTTTCTACTGATACATGGCACAGCAGATGATAACGTCCA
CTTTCAAAACGCAGCTCAACTATCTGCAGCTTTGGTCAGAGATAAAGTCA
AATTTCGAGGACAGTTTTACACGGACAAGAGACATTCAATACAAACGAGC
CATGTTTATTATTTGATTGCTGACTACCTTATGGCGCATCTGAGAAATGT
TGAAATCCCCGCTGATTCAGTATTCGGACTAAAAAATTACCCACTCAAAT
GAAGAAGAAGGCTAGTCAAACCTGAATTAAAGCATCTTTTGTCAAATTAA
GAACTTAAAAGCAGATAAAGTTTAGTTCGAAGAAAGTCTCCGTGGTGGAC
AATGGAAAGTGTTGGCGGGTAAGAGACCATGGTGAAGCCAGGACATCTAA
AGATAAAGAGCTCCCACGCATTTGCTTCGATGCTGGGAGGTTATCATACT
GAATGCAGAATCGATGAATGCGCTTCCAGGTTGGTTATTCACTTAATTAA
GAAAGAGGACGAATATATTTGAAAATCCAATTTTGGTTAATGACTGCAAA
TCTGCAAATTGACATTTTGTTGGGTTGGCAATAATTGAGGAAACCAACGA
ATGTTGTTTTTCGaaggttaaattttgattttcttataaaataatgtAAT
CGAGATCAAGTgctaaaaatcattcaaaatctGCTTTGAAACGAAAAAAA
GAAAGTGATATTTCGTTTCAGCTTAACTCATGCGGAAATCCTACGTTATA
TACACATTTTTGCTTTTAGATAAAAATACTTCAAAACTGCATTGCAAAAT
GTGAAACTTTaaggaaagtttatttttgagTTAAGTACTTCTGGTGTTCT
CAAACAAAGTATCTCTCCTGATTTCCCAAAGTGCAGTGATAGTGACAAGT
CATGTTCATAATCCTAAGGCTGAAAAGGATTTGAAACAAGCGAGGGGTAA
ATTACTCAGAAAacatgattttttaaaaagaataaaagaatcGTACCAAA
CCTTTGTGATTGATCTCCCCCCCCCTCGGTGACATAGAAATGTTTTGGCA
CGTacgtagacgatgctatcgtccgtttagagggtcagtaaacgTGAGAA
AGTACAGAGTCAGGAcatcagggcggtttacggggaaaaagtggcggtag
agttttggaacaatgTTAGACAATAATTTTTACACTGTAAACACCTCTGC
CACTGTTTACTCCACCCCAAACTAAACTCGTTCTCAAATTTATCCCGCTT
CCTGGATTATTCCCTTTTTCAGTGAtaatgtgtagacgataggatcgtca
gCACGTACTTTGTGACATTATCTtgtataattttgattttttaattttgt
ttaataattgtttattatttactatgtgtaaaagaaaattatattGTGTA
AATTGAATTTTAGATGCCCGAACAATACCCGCTAAATATAATGAAAGAAA
TTATCGTCActaaatcgaaa

Run BLAST on NCBI

transcript from alignment at scaffold_341:309522..325216+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00060396 ID=TCONS_00060396|Name=TCONS_00060396|organism=Clytia hemisphaerica|type=transcript|length=15695bp|location=Sequence derived from alignment at scaffold_341:309522..325216+ (Clytia hemisphaerica)
ATTGTTCTTGTCCTCTTGATTCTCATCTCAATCACCCTCGTCCTCGTTTT
CACACTAGCCCTCAAAAAAGACAGTAAGTATTTTCTGGATCAGTCTGGTC
TGCAATTTATACTACTATCATTGTTCTTGTCCTCTTGATTCTCATCTCAA
TCACCCTCGTCCTCGTCTTCATACTAGCACTCAAAAAAGACATTAAGTAT
TTTACTGACCAGTATGGTCTGTAATTTATACTTCATGTAGTTCCCGGACC
AACATAATTGTTCTTGTCCTTTTGATCTTATTTAATCAACCTCATCCTTG
TTGCTTCAAATTAGCTCTAAACAGaaagtaaatattttaatgagtagtct
ggtctgtaatttataGTTTATCTTATTCCAAGACCAACATCATTATTCta
gtcatttttgtttttatctcaATCACCCTCGTCCTCGTTTTAATACTAGC
TCTCAAAAAAGACAGAAAATCTTTTACGGGCCAATctgtcaaaacaaaca
aaagagaTTCCAACAAATCAACCTCGTACCCAGAGTCCATTgaaccactt
tttgattttactcatGAACGTGTTCGTTCAACTGTGAGAGCTATCATCGT
AATCATAAAGTGAACAAAGGGAATGGGTTCGAGTTTGTCTAATAAACAAA
ACTctaattctcaaattttcagaagaattGAGTTCGGAAACGTTGATCAG
TCCAAACAGACGATTTACATTAGACGAAGTTTTTCTAAGGAAATATACAC
CACGCACTGCAAGCATTTATTGGGTGTCAGGTAAGATAATAATCTAAGTC
CTGGAAATTCTACCTATGATAATAATTATTAGGACAATCGCTCCATGGAC
AATCttatattgtaattttttttcataagatgGAGAGGTGATAAcactaa
aaagttaaaatatttattttctctgtctttggaaatattttatgaaagGA
GCTGCTTCAGATAACAAAATTCCGGAGTAGTTTCCCGGGCGAAGACAGTC
AATCGGGATGACGATCCTTATTATCTGGGAAAATGATTTGACtcattttg
gctttttttaaatatcaacTGCAACAGCTAAACAATCTTAATTTCAAAAT
CCTTTCTTTCAGATGACAATTACTTAGATTTTTCGGACGGCATTGTCCGA
AAATCGATCACCAATTCAACTTACTCTGATCGGATTCTCACACGACAAGA
AATGGTAAGTTAACTTCTTAAGGTCGGAATCCTGATAGAGATTGAGATTT
GAAAACTAGTCGAAGTCTCTCGGTTTACGCTACCATCTTAAATGAATTGA
TATGCACTCCTTGAAAGGAGCACAAAAAAAATGGCCTTggtttttaacat
attttttctGTGGAGATTGTTGGAGCATTAAGTAGAAAAGATGAAGGGCC
CGAGTCAAATTTCGAAAACCTACACTGAATTTAGGCTTTTCGACATGTTT
TCATAGCTATATTTCAATAAATCTTCAACAACATTTTCACTATTATTGTT
AAATTGTTAAATTCAGTTGTGGACAGTAAATGTGAAAGCAATTAAAAGAA
CAATCTTCACATTGTTTCAAATCAtcttattttatgttttagGTTGACAA
TAGAATCAGTCGTTCACTAGCCAGACTTTCGCCAGATAATAAATGGGTTT
TACTAGCCAACAATACTAAAAAGGTGAGTGAGGACTTCAATCCCATTATT
TGGACTCGAGATATTTATACCCATCACGTGACTCAATGAGCTACAGGCTA
CCCTGAAGGAATGACAGACACCCCGAAAAGAATTCGGTTTTTCTTCTAGA
acaaagaaatgaaatgaaactcGTTTTCGGAGCAAGTCAGCATCATTTTT
ATGGCGTTTATGTAATGACTTATAATTGATTGCCTTCTTTACAGCTATAT
CGACATTCCTTCTACGCTGACTATTATGTAAAAGAGAGATCTACAAATAG
gtaatattattttgttttcacaaaAACAAGTTATTAGTTAAATACACGAT
TAATCAAAAGGTCATCCTTTCATTTAAGCATGGGCTTAACTCGGTTGTTc
ggttgaaactttttttttcttttttagagtaATCAAACTACATAGCCCGG
ACGGAGATTCGGATGAGCAGATACGACTTTGTACTTGGGCAAACAATGGA
AGTGCTATTGTAAGAATGTGTTATTTATTTTAATTCCAATCTCTCATCAT
TAAGCATTGTATTATAGTCTCTGTAGTATCTTTATTAACAGTTACATTTG
TCCCTTATTTATAAATGCACTCCAGCATTATAGCAAAGCTTAAATCAAAC
TTATATGGTACTCGATGTTTTTTTTCCGACACGCTGAAGgtcggaaaaac
ttttcatATCTGGATATTTTGCCTGGTCATGCAACAGAATTGTTATTTGG
AAGTCTTAGCCCTTGTTTTGGGGATCGTTGAGTCCAACCGCAATTTTCCG
ACCTTAACACGGGCAGTTGAATTACCCTCCCCCACCGTTTGGCACACTCC
TTCAGCTTCTGTTTGGATGGCTACTAATACACCATTGGAGTATCAGATGT
ATTTGGAATTTGAATTCAACGAATGTAGTGAGCCCCATTGCAAGCACAAG
CTGCAGTGAAATACTGCGACgtaaaattttacaattttaaaattcaaagt
cGTTAGGTTAGATAGTTAAAGCGTCCCCTCCTGAACATATAAGCTTTGTC
TTCGCAGGTTTTCGTCTACAAATGCAATGTGTATTACATTGCGACTTTGG
AAACAGAAGACATCAAGTATTACCAGTTAACAACCAGTGGTGTTCCCAAA
TCTGTTTTCAATGGCGTTCCTGATTGGGTTTACGAAGGTAAATAAAGGTT
ACcgtattattttttattaaaagattTAGTCGGCTTCAGAAAGACGAAAT
TACGTTAGGTTTCTTTTATCAAGATCCCGAGTCTCCTTGCATGGGTAGAT
TTTAACTATTTTGTCTACAGCCTGtccagaaaaaaagttgaacatatTGA
TGaagtaaaatctttaaaactcattttttcattctataataaattgctca
aaaaaataaattttgctcTGTTGGCACAATTTTGTAAGTCCGTGACAGTG
ATATCGTTGAATACCGAAACGCGCATGTGTCGTTGGTATCCTTTGGGATG
GTGATTTTATTCATCCTACGCTACACGTGGTTTCTGGAGTGATCGAGACC
CGACGCTGTTCCCGAGTGGGCTTCCAGTGTGGCGTTATGGAGCGCCAAAC
CAGTTAAGGCTGGGTCCATGTCAACATATTTATTTAAGTTTTACCCCGAA
TATCGGCCTGGCTGACGTCAGAGAGGAGAGACAATGACTAAAGTTAATTT
CGATCAATATCTCATAAATCCAATATGTTAGACATGTCGAGAAGTCGGGA
ACGAactattagcgagtttatgtatttgcgcttttgaggacggtaaagtg
actgaagtgatttggaataacccgtaATTCTGCCCCGCAAAATCATGGAC
GATAatagtgctgatttaccgtcgtcctcagttggtcatgatctagtcaa
attagaaccttaccgtctccgtcgctgaaaaacacacatacataaactcg
gtatcgACTCTGCCTGGCCGGTGCCATTTCCGAACGAACTCTTTACTCTC
TCCTCTTGGTAGCAGGATCTCTTTTCTCATTCCGATCAACACGATACTTC
CCGACGAGAGGACTTGCCTCGTCCAAGTGTTTTCTCTCCTAATGAATTCC
CTATCTAACGTGCTCAAAGTGAGCTTCCATCCAAAGGTTTCCATTACAAT
AAATGTGAATATAAAAATTGTGTACCGTGCCCTCATGACAGTGGGCTTGA
AAGCTCAGTCGATAGAGTCGTGTTGGCGCATAGATTCTATTCCACTTTTT
TCCGTACACAAAAGATTTAAAATACAGAGGAGAATTTTTCTGCTCTTCTc
acttttccattttttctcatttcagaGGAGCTGTTGTTTTCTGGGAAAGC
TTTGGAGGTTTCAGCTGATGGCAAATATCTCTCTTACGTCAAATTCAACG
CGAACCAATCGTATTTTAGTTATGCCATTTATGGTCACCCAAGTAAAAGC
TACCCAGATATCGATCGAATCGCTTATCCGAAGGTAATCAGGTCAACATT
AAtgcatttttggacctaccgggaggtcctttaatttgaccgttgtccgt
tcgtctgttacaagcttttctcgggattggctcattagttttttttaatt
ttttgcacaatgatacaaaatagtaatgcttaaaaagtgacggagcccga
ttttgaaaaagaaatttggggGAAACTTGGGCCaaaaaaactacctaaaa
atcaggttttttggactttgtgcaaaattgcttcattagtttttcctgac
ttttggcagaaagatgaagtgcaaggcaccctaacatgtggctgaagtaa
tttttctcggaaaattttttttcgtcgtcaaatacggattttcgcaaatt
tgggccaaaaactacctaaaaataaggttttttggacttggtgcaaaatt
gcttcattagtttttcctgacttttggcagaaagatgaagtgcaaggcac
cctaacatgtggctgaagtaatttttctcggaaaattttttttcgtcgtc
aaatacggattttcgcaaatttgggccaaaaactacctaaaaataaggtt
ttttggacttggtgcaaaattgcttcattagtttttcctgacttttggca
gaaagatgaagtgcaaggcaccctaacatgtggctgaagtaatttttctc
ggaaaattttttttcgtcgtcaaatacggattttcgcaaatttgggccaa
aaactacctaaaaataaggttttttggacttggtgcaaaattgcttcatt
agtttttcctgacttttggcagaaagatgaagtgcaaggcaccctaacat
gtggctgaagtaatttttctcggaaaattttttttcgtcgtcaaatacgg
attttcgcaaatttgggccaaaaactacctaaaaataaggttttttggac
ttggtgcaaaattgcttcattagtttttcctgacttttggcagaaagatg
aagtgcaaggcaccctaacatgtggctgaagtaatttttctcggaaaatt
ttttttcgtcgtcaaatacggattttcgcaaatttgggccaaaaactacc
taaaaataaggttttttggacttggtgcaaaattgcttcattagtttttc
ctgacttttggcagaaagatgaagtgcaaggcaccctaacatgtggctga
agtaatttttctcggaaaatttttttttttgtcgtaaaatacgaattttc
ttttttgggggaaattctgttttaccattttcctgttagcagcttttctc
gggatcggcttattatttttttttcattttttgcacaatgatacaaaata
gtaatgcctaaaaagtgacggagcccgattttgaaaaagaaatttggggT
AAACTTGGGCCaaaaaaactacctaaaaataaggttttttggactttgtg
caaaattgcttcattagttttttctgatttttgtcagaaagatagagtgc
aaggtaccttaaaatgtggctgaagtaatttttttcggaagatttttttt
cgtcataaaANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNgacgaccaagttacacaatgataaaaga
aaataaatcagacgtttttgcattgttctaaaacttattgtgtttgctca
ataccaatagtaaaatgtagaacgcctacttttatctgattttgatcaac
aggtaggtccattcagcatgttgcttgtctTCCTAATTTTAATGCATCGT
atcaatggaaaaaatttcactctCTCAAGCTCTCTGGATATTGAATAGAT
CTTTCCCTTATGGAAGTTTTTATAGCCCTGTCTTTCAGTAAGGATGAAAC
TACTCACATGGTACtgcttttgaaaacttttgctTTTCTCGGCAAATGAC
CTTATTGTTGTAGCTTCTATGCAatctattgagtttaaagccctaAAGTG
GCTGGAGAGAAATCTTTAACCtatctcaagcaagaaaaagtgaaacttta
AGATTTGAGCCGCATTTAGAATGACGAATTGAATCTagccctttctttgt
ttttgcgCAACCGGGcctttagaccatgttcacacacTACTGTTCCATTT
CGCTCAGggatgattttcgttacggatcgagggTATTcgtattggtttcg
gaacggaGCAGTTTCGTTCCGAtgaaaaagtggagcgaaacctttttgat
ctgttttgctttgtgaCGTCTTCTTTCTTgatgtttcgaattttgacgtt
cacacttgtttcggaactgtttcgtttcggaacggaaagaaaccgtaacg
tctgaacatggtcttaaagTCAATGATATAATCCTGTAGTATCTTTAACT
TCCTTTTTTGACGATCGGCGTGGTGTTCAATGTTAGTTTTATTATTGTTC
TTCCAGGCTGGTTTTCCGAACCCAACCAtcgaaatcaaaatcatcaatcT
GCAGAGTGTCTTGCAAGAAGATAatagtgtcaaaaatttcacCCAATATA
AAAAGATCCTAAGTCCACctgctaaaatctcaaaagggTGAGTCCGTGAT
TGAAGATTAACTCAAATTCAACACGAGAACATACCGATGTTGCAGGGGAG
GATAGTGTCCTTTcctttttatatcaattttcaaCAACAGCCCTCCTCCT
TGCATGATTTGAAACTGAAAGATTAAAATGTCTTCCCTCTAAGCTATTAA
TAGAAGAAATGATATGGAAATATTACAGAGGATTAATTGAGATGAGTGTT
TCCTTTTCATTTCTACCAGTGATTATTATTATTGCATTATGACTTGGAGT
CCTGGGAACGAGTTGTATGTCCAATGGATGAACCGTGCTCAAAACGAGAC
TGTTTGTATGAAGTACGATTCGACAAACGGACAACCAACAACTGTAAGTT
TATGAAAGTActtcccagctggtacacaacgttgactcaacgttcatcta
acgttatatggacgttgtgaacgttgtGTGCTTACAGTTgattctcgcta
attcgaactcgaaaggGGAATATTGGTTTTTTCGAATTAAGGAGAAATTC
GAGTTaaagcatgattatttcatagaggtcgatagacctgggaaatatat
tactgtaaattaaGTTGAGAAATTAAATTAAGAGGGTTTCGCCTTGACGG
AAATtgggaataagttcgaattatagaaagattcgaataagagaagttcg
aataagcgagtcCAGTGTATTAGCCAGGGcccaaaacatttcaaattcaa
cGTTGAGTGATTCTGATTTAAACGATAAGAGTTAAAAATGGAATAAATCT
TTTTCAGCTTCAAGAATACAATACACCAGGTGGATGGATAGACGATGATG
TAGGTGACATTACtaattcatcatttttcaatCTGCTGCTTTTTTCCAGT
ACTAGAAATTGTTTTCTAACAATCTCGTTTTGCAACGGGGGAAAGTGCTT
CGTATGTTTTGTATGTTCAGGTTTCCAAGTTTCCAACTGTTTTAAAGAAT
AAGAAAAACAATGAACATCCAGAAATGTTTATCTAAGGgtcgtaattttc
aaaaaagcaacaaaaatgttaaaaaactcTTTTGGAGAACGTCTCCGTAA
GTAGCAGACTCTGCCTCTTGTCCGGCATCCTTCAAACCTAATAAATTCCG
GGTATTTTGCATTCCTTATTGTAAACAAACTTAAAGAGGTCAACGTGCAT
TCTTTCAGTACACCAAACCAAAGTTTGCCAAAGACAATTCCAATTATATC
ACGCTATTGCCACACGAAGATTTTCGACATTTGGCTAAAGTCTCGATGAA
TCCCaaggtatgaacttaatttttccTTCTATCAGGAGGCTAATTAGCTA
GAGGGATGCTAGCAACCTAACCGTTAGGATTTTTAGGGTTTTAACCGTTT
GATTTTTACCAGAACCTTTTTTGACGGCCGTTAGTCACAGAGGATTGCTt
tacttaggcaaaaagagATACAGGGATAAACGAATGACCTGGGGAACCGT
TTCAAATCCGTCAGACTCGAGCATAGCTTttgaaaaacacaaattaaaaa
attagcCTCTTTTAGCCTACCTTTTTATGAAAAACCCATCAGAAACACAC
CCCTTGAATCGACAAGGATAGTCCCTTAAGCCCCCCGTAAAGGCCGTAAA
ATCCGAAAGGAGAAGTTTGTATTTCACTAGCCTATAATAATTGTTTCCGC
GTTTCGTTTAGAATGGCCCTGAAGTGGAGTTTTTGACGGATGGAAAATTC
ATGGTTGTGGATATCAACTGTTACAACGCGGATGATCAAATTTTGTAAGT
TGGACTCATTTCCAAACCACCTTCAATATATTACTTCAAGAGAAGCATGA
GAAAAATTGTAAATCATTTTCCGCTGTctcattttttttcagatattaTC
GAAGCACCCAAGAATCTCCTGCACAACGTCATGTCTATCGAATCAATTTA
CAAACCAAAGAAAACAGTTGTATCACTTGTGACTTGTTGAAAGGTAAGAC
ATGCAACTTTACAGAACTCTTCTAACTGGTGGAACAACTTTAACACGGAG
GGCTTAAAATGCTTAATACATTCGCTTAAACTTCTAGACTGATTCCCTGA
CCTCTAAGGATAAATTCCTAAATAGAAATTATAACCGTGAAGTTTTTTCG
TTAGAGAATGGATAAACTAATTTTTAGCTCAAATAGTTGGATAGAGTGTC
GTCCAACAGCCTTCTTATTTCTGCcgagaaaatttgaagaatacTGAAAG
CAGAACAGAAAGCTCAACCCACTTTTCGTACTTTTGGTTAATTTTTTGAG
CTTTGTGAGTTATGATAACGCGCTTAACATGTCTATGTGAAAATTAGGTT
GTTAGGTTATACAAGTTCATCTGTGCATTCATTGAGCAGagtcttttagt
gagttaaagcATGGTGTTTGTTTTTCCTTTCTGGTAGTTTACATATCTCG
TTTGCAGGCTTGATTACTTCCGCGATGAAGAATAAATGTTTCACCATTTC
TGGTCTGTATTACAAAGGGACGAGATTTCTGGATTTCTAATATATTTCTA
TTGCATTATTGTAGACAGTGATGGCACCAAATGTACATATCACGATATTG
TCTTCAGCAAGAAGTGTACGTATGCAACCATCAACTGCAAAGGACCTTAC
GTACCCGTATCTTACATGGTCAATATGGAAACAATGAACGTACAAAACCT
AACGTCTAATGAACATGTTAAAGACTTATTAAGTAGGAAAGCGTTACCGA
CAGAGAAATTTTATACTATAAAATCTGATGGGTGGGATATTCACGTTAAA
GAGACACGCCCTGCGGGATTTGACCCCAAGAAGAAATATCCGGTGTTGTT
GAGTGTTTATGGTGGTCCAAGCACGCAAAAggtaaaagaaattttctttg
gaaGTTATTCCCTTTAGGTGTTGATTGGCTTAATAATTATATGGAGAAGT
AGAAAATCCCTTTGAAGCTATTTCCTTACAGGGATGCTAGAAAGCCTGTA
AAGTATACAGAAAAATACATTTTGGCTTTCGGAAAGAAAATTAACCTCAC
GGTCTGTAAAACAAATGGTTCTCTACCAGCCAGTCGGTCTGATGACAATA
GCttgaaaaatttagcaaaaaaaaatttagcctTTTCTTATTCAAAAAGT
TCTCAATACACGTCTTGAAGGTTGTACTGTAAATGCAAGGTGTTTCTGAT
GGACTGATTCTTTACAATCCTCGCAGGTGACAGATCGGTACAGTTACGGA
TTCGATCACTTTTTGGTATCTTCGCATGATATTATTCTCATTAACTTCGA
TGCTAGAGGAGCTGGTTACTATGGTTACAAGTATGTTCGTTTAACATTAG
CGAGGTTAATTTTGACtgtaaagtgcgataccgtaggcctgtatataact
tgccaaagcaaatcatacaagtgaaatcttatgtaaAGGCCTACGATATC
TCATTGAAAGGTCTAAATAAAAACTACTCAATTCTGAAAGGAAATAACTG
TTTCACGCTGAAATATTGTGGTAGCATGACATGCATGTCgtttattttca
ttcagtttattcaaaacaatctcAGTACTACAGTTAAGCAAATAAAGACT
AAAGTCAGACTAGATCCCGATTCCATATTCCTCCTTCTATTGGTATAAGT
CGTACCAGCGTactttacaaatttgaaatctATTTTCGATTTATAATTGG
ATGCTCTGACGTTTTTCCCGGACAATTCAACTTTACGCTCCCTTTTCAGT
AGAAGTTTTCCTGAGCTAAATTTAATGTGTAAAAGTTTACTTTCTGTTCC
TTTCTTTAGGTTTATGTACGCAGTCTACAAACAACTTGGTCATTATGAAG
CCGTCGATGCCGTTAACGTTGGCAAGTAAGTCCACTTGTGCTTGTATATC
GTTGCTTGGGGCTCGAAAAAAGATCCCGATCATTTATCTATTGGAACTTT
AGTAAAGCAGGGTTACTAAAACCCAAGTATTTGATCATTGACACGGGCAA
TTATTCATGAAGAAATAGATAAAAATCAGCTTCCATTCGATGTTAAGTTT
GGAGATGTATACCCAGCATTCTATTTTTTGCGTGTCCCTGAATTTTATAC
ATGACAGTCCACAAATCTCAGAATTTTAGTTCTCACTTTTGTAACAAAAT
AAAGGTTAAGGCCACTGGACTTTCATATTTCATTTATTCACTTTCCAGGT
ACTTAAAAACACAACCTTACGTTGACCCAAAGAAAATCGCTATTTGGGGC
TGGGTGAGTAAAAATGTGCTTGTTAATCCTACTGGCATCAAACATTAAAG
AACGGTCATCTCAGGTCCatcgaaaatatcaaaaaacgtTCTTCTAACAT
CAGCAAACCCGAACTAACGTTGAAACACAATCTCGTTCCCTGTGCCATCA
GTAAGCaccaaaaagctgataatacactAGCGTCAaccagtaacgtaaat
aaagcctgggatgcacggggacgaggttggccGAAACACTGTTATGAAAC
AAGTTTatagaaaagtgaaaaagttttcaatctTGATAATATTTCTTTTG
TTCATTTCAGTCGTATGGAGGATTCTATTCATCAACTGTGATGGGAATGG
ACAGTGACGTCATCACGACGGCCGTTGCTGTTGCTCCAGTGACTGATTGG
CGTTACTATGGTAATTCTTATTTCATTATTATGATAACGCTACTGTAGCA
ACCAATTTTACGATGTTTTTTGGTCGAAAGAGTAAGATTTCTTTAGATTA
CAGATTCTTTCGTTTGATGCGACTTTTGACCTTATTAAAAACTTTCTGCG
TAGGCCTCCGATTTcctcaattcaaaatttcctctACTGACCTTACATAC
CTTAAATTTCCGGGAAATTGTATATTGATGACCTAACGAAAACTTCCTAT
CCAGTGGTGATTTACCTCATCTTTCATAAGTACGAGCTTTCAAAATATGc
tcacacttttttgaaaaataacctttTTTGGCCTTATATAGTGATCATGA
CCTATTGACAAATGGCCGGTTTGAATAAATGTTTGACGCGCATGATCCAT
TAACAATCAATCCCAGGATCTTATACTTTTGTTTCTACTTTAGATACTGT
TTACACTGAAAGATATATGGGACTGCCTACACCAGAAGATAATATTGCTG
GGTATCAGGTTAGTAGAGTGGCTCAGTCCGGAAGAAGCCATATAATCCTA
TTAACTTTCGTCTATAAAACCGAACTGACCAAACTAAATCTAAAGGTGAT
GTCTAAGTTTTCTTGAGTGGAGTTTAACTCTTGCATGATTAGAATAACCG
TCGTAATATTACGTATTTTCGAATCTATGATAACAGGAACATTGATATCT
TGATTTTTACTAGAGTACGAGTGTCTTGAGCATGACAAAGAACTTCAGAG
GGAAGAACTTTCTACTGATACATGGCACAGCAGATGGTGAGAAACCATTT
CATTGTATAGTGCTAATTAGTTTCATACTCGTTTACAGGCCTCCCAGAGA
AGTCACTGATTACGCAATCACACCAAAATAATCCAATGACGATCTtgtat
cgttttttttttcatcaaaaatctCTTACATCAAATTTCTTGTCCATTGA
ACTACTTTTAATTCAAAACTTTTATGCACttctaaattttctttcgtAGA
TAACGTCCACTTTCAAAACGCAGCTCAACTATCTGCAGCTTTGGTCAGAG
ATAAAGTCAAATTTCGAGGACAGGTGTGTTTCACTTTTGCCAGCATCGAC
TGGTATTTTTAATGGTTATTTCAATTGTTAATTTGCGATCTTTTCTCTTA
TGGAGTTAAATTTagaccaaaaaaattgaaatgaaaattttaattctccT
ACATAGAGGTTACTAGCTTTATCATTTCCTTTTTGGTTTTTGGTGAGTTG
ACTATTTTATAAGAAGCTTTTCAATGTTCATCATTTTCAGTTTTACACGG
ACAAGAGACATTCAATACAAACGAGTNGCAACCAATTTTACGATGTTTTT
TGGTATTTAGTGCTACCTTGGACTCTGATAGAGTTCAATCCTCCCAGCTt
agaaaaacataaaataagcaaatttctttttcgtatagtctatttgattt
gatttttttttttaacaaagttaATCTTTGGACGATTTTTTGTTAGTCGT
TTACCGTCTAGTGGTAGCTTTATTACCAATCATTTGTTACTCAATTTTAT
CGTGAAAGATTAACGGACAGATTCTTTCGTTTGATGCGACTTTTGACCTT
ATTAAAAACTTTCTGCGTAGGCCTCCGATTTcctcaattcaaaatttcct
ctACTGACCTTACATACCTTAAATTTCCGGGAAATTGTATATTGATGACC
TAACGAAAGCTTGCTAACCAGTGGTGATTTACCTCATCTTTCATAAGTAC
GAGCTTTCAAAATATGctcacacttttttgaaaaataacctttTTTGGCC
TTATATAGTGATCATGACCTATTGACAATAATAGCCGGTAAATGGGCGTT
TTTCTTCGAGTAAATGTTTGACGCACATGACCCATTTACAATCAATCCCA
GGATCTTATACCTTCGTTTCTACTTTAGATACTGTTTACACCGAAAGATA
TATGGGACTGCCTACACTTGAAGATAATATTGCTGGGTATCAGGTTAGTA
GAGTGGCTCAGTCCGGATGAAGCCATACAATCCTATTACCTTTCGTCTAT
AAAACCGAACTGACCAAACTAAATCTAAAGGTGGTGTCTAAGTTTTCTTG
AGTGGAGTTTAACCCTCGCATGATTAGAATAACCGTCGTAATATTACGTA
TTTTCGAATCTATGATAACAGGAACATTGATATCTTGATCTTTACTAGAG
TACAAGTGTCTTGAGCATGACAAAGAACTTCAGAGGAAAGAACTTTCTAC
TGATACATGGTACAGCAGATGGTGAGAAAGCGTTTCATTGTATAGTATAC
TTAGTTTCATACTCGTTTACAGGCCTCCCAGAGAAGTCACTGATTACGCA
ATCACACCAAAATAATCCAATCACGATCCTGTACCgttttttataaataa
gaaatgaattaaaattaaatcaaaaatcttgTACATCAAATTTCTTGTAC
ATTGAACTACTTTTGTGAACATTGAACACGTCGCTCCCCTCGTATACTAC
GAACTAGTGTAATAGCAACGAATCGATAGCGcagttgggagagcaatcgc
ccggcaagcgagaggtcgtgggttcaatccccactcgatttgttaccttt
gagaaaactgggaagtacattagtgcatgatccgttgattcattactgAA
CTACTTTTAATTCAAAACTTTTATGTACTTCTAAATTTTCCTTCGTAGAT
AACGTCCACTTTCAAAATGCAGCTCAACTATCTGCAGCTTTGGTCAGAGA
TAAAGTCAAATTTCGAGGACAGGTGTGATTCACTTTTGCCAGCATCGACT
GGTATTTTTAATGGTTATTTTAATTGTTAATTTGCGATCTTCTCTCTTAT
GGAGTTAAATTTAgaccaaaaaatttgaaatgaaaattttaattctccTA
CATAGAGGTTACTAACTTTATCATTTCCTTTTTGGTTTTCGGTGAGTTGA
CTATTTTATAAGAAGCTTTTCAATCTTCATCATTTTCAGTTTTACACGGA
CAAGAGACATTCAATACAAACGAGCCATGTTTATTATTTGATTGCTGACT
ACCTTATGGCGCATCTGAGAAATGTTGAAATCCCCGCTGATTCAGTATTC
GGACTAAAAAATTACCCACTCAAATGAAGAAGAAGGCTAGTCAAACCTGA
ATTAAAGCATCTTTTGTCAAATTAAGAACTTAAAAGCAGATAAAGTTTAG
TTCGAAGAAAGTCTCCGTGGTGGACAATGGAAAGTGTTGGCGGGTAAGAG
ACCATGGTGAAGCCAGGACATCTAAAGATAAAGAGCTCCCACGCATTTGC
TTCGATGCTGGGAGGTTATCATACTGAATGCAGAATCGATGAATGCGCTT
CCAGGTTGGTTATTCACTTAATTAAGAAAGAGGACGAATATATTTGAAAA
TCCAATTTTGGTTAATGACTGCAAATCTGCAAATTGACATTTTGTTGGGT
TGGCAATAATTGAGGAAACCAACGAATGTTGTTTTTCGaaggttaaattt
tgattttcttataaaataatgtAATCGAGATCAAGTgctaaaaatcattc
aaaatctGCTTTGAAACGAAAAAAAGAAAGTGATATTTCGTTTCAGCTTA
ACTCATGCGGAAATCCTACGTTATATACACATTTTTGCTTTTAGATAAAA
ATACTTCAAAACTGCATTGCAAAATGTGAAACTTTaaggaaagtttattt
ttgagTTAAGTACTTCTGGTGTTCTCAAACAAAGTATCTCTCCTGATTTC
CCAAAGTGCAGTGATAGTGACAAGTCATGTTCATAATCCTAAGGCTGAAA
AGGATTTGAAACAAGCGAGGGGTAAATTACTCAGAAAacatgatttttta
aaaagaataaaagaatcGTACCAAACCTTTGTGATTGATCTCCCCCCCCC
TCGGTGACATAGAAATGTTTTGGCACGTacgtagacgatgctatcgtccg
tttagagggtcagtaaacgTGAGAAAGTACAGAGTCAGGAcatcagggcg
gtttacggggaaaaagtggcggtagagttttggaacaatgTTAGACAATA
ATTTTTACACTGTAAACACCTCTGCCACTGTTTACTCCACCCCAAACTAA
ACTCGTTCTCAAATTTATCCCGCTTCCTGGATTATTCCCTTTTTCAGTGA
taatgtgtagacgataggatcgtcagCACGTACTTTGTGACATTATCTtg
tataattttgattttttaattttgtttaataattgtttattatttactat
gtgtaaaagaaaattatattGTGTAAATTGAATTTTAGATGCCCGAACAA
TACCCGCTAAATATAATGAAAGAAATTATCGTCActaaatcgaaa

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_037992	XLOC_037992	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_341	supercontig	scaffold_341:309522..325216 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00150417	0.00131345	0	0	0.00381485	0.00142779	0.0187039	0.240468	0.00744094	0.0236685	0.0103349	0.0177307	0.243315	0.178015	0.010743	0.0428915	0.0463742	0.0137548	0.038788	0.0761217	0.110105	0.0247156	0.0137304	0.00912783	0.201247	0.507728	0.347318	0.306013	0.00750047	0.0704327

Blast

[Close]

BLAST of TCONS_00060396 vs. Swiss-Prot (Human)
Match: DPP4 (Dipeptidyl peptidase 4 OS=Homo sapiens GN=DPP4 PE=1 SV=2)

HSP 1 Score: 393.66 bits (1010), Expect = 2.998e-120
Identity = 247/749 (32.98%), Postives = 413/749 (55.14%), Query Frame = 1

Query:  109 RRFTLDEVFLRKYTPRTASIYWVSDDNYLDFSDGIVRKSITNSTYSDRILTRQEMVDNRISRSLA--RLSPDNKWVLLANNTKKLYRHSFYADYYVKERSTNRVIKLHSPDGDSDEQI----RLCTWANNGSAIVFVYKCNVYYIATLETEDIKYYQLTTSGVPKSVFNGVPDWVYEEELLFSGKALEVSADGKYLSYVKFNANQ-SYFSYAIYGHPSKSYPDIDRIAYPKAGFPNPTIEIKIINLQSVLQEDNSVKNFTQYKKILSPPAKISKGDYYYCIMTWSPGNELYVQWMNRAQNETV--CMKYDSTNGQPTTLQEYN----TPGGWIDD-DYTKPKFAKDNSNYITLLPHED-FRHLAKVSMNPKNGPEVEFLTDGKFMVVDINCYNADDQILYYRSTQ--ESPAQRHVYRINLQT-KENSCITCDLLKDSDGTKCTYHDIVFSKKCTYATINCKGPYVPVSYM---VNMETMNVQNLTSNEHVKDLLSRKALPTEKFYTIKSDGWDIHVKETRPAGFDPKKKYPVLLSVYGGPSTQKVTDRYSYGFDHFLVSSHDIILINFDARGAGYYGYKFMYAVYKQLGHYEAVDAVNVGKYLKTQPYVDPKKIAIWGWSYGGFYSSTVMGMDSDVIXXXXXXXXXXDWRYYDTVYTERYMGLPTPEDNIAGYQSTSVLSMTKNFRGKNFLLIHGTADDNVHFQNAAQLSAALVRDKVKFRGQFYTDKRHSIQTS----HVYYLIADYL 2280
            + +TL +     Y  +  S+ W+SD  YL   +  +   + N+ Y +  +  +    +    S+    +SPD +++LL  N  K +RHS+ A Y + + +  ++I        ++E+I    +  TW+  G  + +V+  ++Y    +E  ++  Y++T +G    ++NG+ DWVYEEE+  +  AL  S +G +L+Y +FN  +     Y+ Y   S  YP   R+ YPKAG  NPT++  ++N  S+    +SV N T  +  ++ PA +  GD+Y C +TW+    + +QW+ R QN +V     YD ++G+   L        +  GW+     ++P F  D +++  ++ +E+ +RH+    ++ K   +  F+T G + V+ I    +D   LYY S +    P  R++Y+I L    + +C++C+L    +  +C Y+ + FSK+  Y  + C GP +P+  +   VN + + V  L  N  +  +L    +P++K   I  +      +   P  FD  KKYP+LL VY GP +QK    +   +  +L S+ +II+ +FD RG+GY G K M+A+ ++LG +E  D +   +      +VD K+IAIWGWSYGG+ +S V+G  S V    +AVAPV+ W YYD+VYTERYMGLPTPEDN+  Y++++V+S  +NF+   +LLIHGTADDNVHFQ +AQ+S ALV   V F+  +YTD+ H I +S    H+Y  ++ ++
Sbjct:   41 KTYTLTDYLKNTYRLKLYSLRWISDHEYLYKQENNIL--VFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI--------TEERIPNNTQWVTWSPVGHKLAYVWNNDIY--VKIE-PNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSL----SSVTNATSIQ--ITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKK---DCTFITKGTWEVIGIEALTSD--YLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCEL----NPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRV--LEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFI 759

The following BLAST results are available for this feature:

BLAST of TCONS_00060396 vs. Swiss-Prot (Human)

BLAST of TCONS_00060396 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DPP4	2.998e-120	32.98	Dipeptidyl peptidase 4 OS=Homo sapiens GN=DPP4 PE=...	[more]

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TCONS_00060396 (transcript) - C. hemisphaerica