TCONS_00060390 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00060390
Unique Name	TCONS_00060390
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3573

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_341:309400..325216+

transcript sequence

>TCONS_00060390 ID=TCONS_00060390|Name=TCONS_00060390|organism=Clytia hemisphaerica|type=transcript|length=3573bp
ATCATTGTTCTTGTCCTCTTGATTCTCATCTCAATCACCCTCGTCCTCGT
TTTCACACTAGCCCTCAAAAAAGACAaagaattGAGTTCGGAAACGTTGA
TCAGTCCAAACAGACGATTTACATTAGACGAAGTTTTTCTAAGGAAATAT
ACACCACGCACTGCAAGCATTTATTGGGTGTCAGATGACAATTACTTAGA
TTTTTCGGACGGCATTGTCCGAAAATCGATCACCAATTCAACTTACTCTG
ATCGGATTCTCACACGACAAGAAATGGTTGACAATAGAATCAGTCGTTCA
CTAGCCAGACTTTCGCCAGATAATAAATGGGTTTTACTAGCCAACAATAC
TAAAAAGCTATATCGACATTCCTTCTACGCTGACTATTATGTAAAAGAGA
GATCTACAAATAGagtaATCAAACTACATAGCCCGGACGGAGATTCGGAT
GAGCAGATACGACTTTGTACTTGGGCAAACAATGGAAGTGCTATTGTTTT
CGTCTACAAATGCAATGTGTATTACATTGCGACTTTGGAAACAGAAGACA
TCAAGTATTACCAGTTAACAACCAGTGGTGTTCCCAAATCTGTTTTCAAT
GGCGTTCCTGATTGGGTTTACGAAGaGGAGCTGTTGTTTTCTGGGAAAGC
TTTGGAGGTTTCAGCTGATGGCAAATATCTCTCTTACGTCAAATTCAACG
CGAACCAATCGTATTTTAGTTATGCCATTTATGGTCACCCAAGTAAAAGC
TACCCAGATATCGATCGAATCGCTTATCCGAAGGCTGGTTTTCCGAACCC
AACCAtcgaaatcaaaatcatcaatcTGCAGAGTGTCTTGCAAGAAGATA
atagtgtcaaaaatttcacCCAATATAAAAAGATCCTAAGTCCACctgct
aaaatctcaaaaggTGATTATTATTATTGCATTATGACTTGGAGTCCTGG
GAACGAGTTGTATGTCCAATGGATGAACCGTGCTCAAAACGAGACTGTTT
GTATGAAGTACGATTCGACAAACGGACAACCAACAACTCTTCAAGAATAC
AATACACCAGGTGGATGGATAGACGATGATTACACCAAACCAAAGTTTGC
CAAAGACAATTCCAATTATATCACGCTATTGCCACACGAAGATTTTCGAC
ATTTGGCTAAAGTCTCGATGAATCCCaagAATGGCCCTGAAGTGGAGTTT
TTGACGGATGGAAAATTCATGGTTGTGGATATCAACTGTTACAACGCGGA
TGATCAAATTTTatattaTCGAAGCACCCAAGAATCTCCTGCACAACGTC
ATGTCTATCGAATCAATTTACAAACCAAAGAAAACAGTTGTATCACTTGT
GACTTGTTGAAAGACAGTGATGGCACCAAATGTACATATCACGATATTGT
CTTCAGCAAGAAGTGTACGTATGCAACCATCAACTGCAAAGGACCTTACG
TACCCGTATCTTACATGGTCAATATGGAAACAATGAACGTACAAAACCTA
ACGTCTAATGAACATGTTAAAGACTTATTAAGTAGGAAAGCGTTACCGAC
AGAGAAATTTTATACTATAAAATCTGATGGGTGGGATATTCACGTTAAAG
AGACACGCCCTGCGGGATTTGACCCCAAGAAGAAATATCCGGTGTTGTTG
AGTGTTTATGGTGGTCCAAGCACGCAAAAgGTGACAGATCGGTACAGTTA
CGGATTCGATCACTTTTTGGTATCTTCGCATGATATTATTCTCATTAACT
TCGATGCTAGAGGAGCTGGTTACTATGGTTACAAGTTTATGTACGCAGTC
TACAAACAACTTGGTCATTATGAAGCCGTCGATGCCGTTAACGTTGGCAA
GTACTTAAAAACACAACCTTACGTTGACCCAAAGAAAATCGCTATTTGGG
GCTGGTCGTATGGAGGATTCTATTCATCAACTGTGATGGGAATGGACAGT
GACGTCATCACGACGGCCGTTGCTGTTGCTCCAGTGACTGATTGGCGTTA
CTATGATACTGTTTACACTGAAAGATATATGGGACTGCCTACACCAGAAG
ATAATATTGCTGGGTATCAGAGTACGAGTGTCTTGAGCATGACAAAGAAC
TTCAGAGGGAAGAACTTTCTACTGATACATGGCACAGCAGATGATAACGT
CCACTTTCAAAACGCAGCTCAACTATCTGCAGCTTTGGTCAGAGATAAAG
TCAAATTTCGAGGACAGTTTTACACGGACAAGAGACATTCAATACAAACG
AGCCATGTTTATTATTTGATTGCTGACTACCTTATGGCGCATCTGAGAAA
TGTTGAAATCCCCGCTGATTCAGTATTCGGACTAAAAAATTACCCACTCA
AATGAAGAAGAAGGCTAGTCAAACCTGAATTAAAGCATCTTTTGTCAAAT
TAAGAACTTAAAAGCAGATAAAGTTTAGTTCGAAGAAAGTCTCCGTGGTG
GACAATGGAAAGTGTTGGCGGGTAAGAGACCATGGTGAAGCCAGGACATC
TAAAGATAAAGAGCTCCCACGCATTTGCTTCGATGCTGGGAGGTTATCAT
ACTGAATGCAGAATCGATGAATGCGCTTCCAGGTTGGTTATTCACTTAAT
TAAGAAAGAGGACGAATATATTTGAAAATCCAATTTTGGTTAATGACTGC
AAATCTGCAAATTGACATTTTGTTGGGTTGGCAATAATTGAGGAAACCAA
CGAATGTTGTTTTTCGaaggttaaattttgattttcttataaaataatgt
AATCGAGATCAAGTgctaaaaatcattcaaaatctGCTTTGAAACGAAAA
AAAGAAAGTGATATTTCGTTTCAGCTTAACTCATGCGGAAATCCTACGTT
ATATACACATTTTTGCTTTTAGATAAAAATACTTCAAAACTGCATTGCAA
AATGTGAAACTTTaaggaaagtttatttttgagTTAAGTACTTCTGGTGT
TCTCAAACAAAGTATCTCTCCTGATTTCCCAAAGTGCAGTGATAGTGACA
AGTCATGTTCATAATCCTAAGGCTGAAAAGGATTTGAAACAAGCGAGGGG
TAAATTACTCAGAAAacatgattttttaaaaagaataaaagaatcGTACC
AAACCTTTGTGATTGATCTCCCCCCCCCTCGGTGACATAGAAATGTTTTG
GCACGTacgtagacgatgctatcgtccgtttagagggtcagtaaacgTGA
GAAAGTACAGAGTCAGGAcatcagggcggtttacggggaaaaagtggcgg
tagagttttggaacaatgTTAGACAATAATTTTTACACTGTAAACACCTC
TGCCACTGTTTACTCCACCCCAAACTAAACTCGTTCTCAAATTTATCCCG
CTTCCTGGATTATTCCCTTTTTCAGTGAtaatgtgtagacgataggatcg
tcagCACGTACTTTGTGACATTATCTtgtataattttgattttttaattt
tgtttaataattgtttattatttactatgtgtaaaagaaaattatattGT
GTAAATTGAATTTTAGATGCCCGAACAATACCCGCTAAATATAATGAAAG
AAATTATCGTCActaaatcgaaa

Run BLAST on NCBI

transcript from alignment at scaffold_341:309400..325216+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00060390 ID=TCONS_00060390|Name=TCONS_00060390|organism=Clytia hemisphaerica|type=transcript|length=15817bp|location=Sequence derived from alignment at scaffold_341:309400..325216+ (Clytia hemisphaerica)
ATCATTGTTCTTGTCCTCTTGATTCTCATCTCAATCACCCTCGTCCTCGT
TTTCACACTAGCCCTCAAAAAAGACAGTAAGTATTTTCTAGATCAGTCTT
GTCTGCAATTTATACTACTATCATTGTTCTTGTCCTCTTGATTCTCATCT
CAATCACCCTCGTCCTCGTTTTCACACTAGCCCTCAAAAAAGACAGTAAG
TATTTTCTGGATCAGTCTGGTCTGCAATTTATACTACTATCATTGTTCTT
GTCCTCTTGATTCTCATCTCAATCACCCTCGTCCTCGTCTTCATACTAGC
ACTCAAAAAAGACATTAAGTATTTTACTGACCAGTATGGTCTGTAATTTA
TACTTCATGTAGTTCCCGGACCAACATAATTGTTCTTGTCCTTTTGATCT
TATTTAATCAACCTCATCCTTGTTGCTTCAAATTAGCTCTAAACAGaaag
taaatattttaatgagtagtctggtctgtaatttataGTTTATCTTATTC
CAAGACCAACATCATTATTCtagtcatttttgtttttatctcaATCACCC
TCGTCCTCGTTTTAATACTAGCTCTCAAAAAAGACAGAAAATCTTTTACG
GGCCAATctgtcaaaacaaacaaaagagaTTCCAACAAATCAACCTCGTA
CCCAGAGTCCATTgaaccactttttgattttactcatGAACGTGTTCGTT
CAACTGTGAGAGCTATCATCGTAATCATAAAGTGAACAAAGGGAATGGGT
TCGAGTTTGTCTAATAAACAAAACTctaattctcaaattttcagaagaat
tGAGTTCGGAAACGTTGATCAGTCCAAACAGACGATTTACATTAGACGAA
GTTTTTCTAAGGAAATATACACCACGCACTGCAAGCATTTATTGGGTGTC
AGGTAAGATAATAATCTAAGTCCTGGAAATTCTACCTATGATAATAATTA
TTAGGACAATCGCTCCATGGACAATCttatattgtaattttttttcataa
gatgGAGAGGTGATAAcactaaaaagttaaaatatttattttctctgtct
ttggaaatattttatgaaagGAGCTGCTTCAGATAACAAAATTCCGGAGT
AGTTTCCCGGGCGAAGACAGTCAATCGGGATGACGATCCTTATTATCTGG
GAAAATGATTTGACtcattttggctttttttaaatatcaacTGCAACAGC
TAAACAATCTTAATTTCAAAATCCTTTCTTTCAGATGACAATTACTTAGA
TTTTTCGGACGGCATTGTCCGAAAATCGATCACCAATTCAACTTACTCTG
ATCGGATTCTCACACGACAAGAAATGGTAAGTTAACTTCTTAAGGTCGGA
ATCCTGATAGAGATTGAGATTTGAAAACTAGTCGAAGTCTCTCGGTTTAC
GCTACCATCTTAAATGAATTGATATGCACTCCTTGAAAGGAGCACAAAAA
AAATGGCCTTggtttttaacatattttttctGTGGAGATTGTTGGAGCAT
TAAGTAGAAAAGATGAAGGGCCCGAGTCAAATTTCGAAAACCTACACTGA
ATTTAGGCTTTTCGACATGTTTTCATAGCTATATTTCAATAAATCTTCAA
CAACATTTTCACTATTATTGTTAAATTGTTAAATTCAGTTGTGGACAGTA
AATGTGAAAGCAATTAAAAGAACAATCTTCACATTGTTTCAAATCAtctt
attttatgttttagGTTGACAATAGAATCAGTCGTTCACTAGCCAGACTT
TCGCCAGATAATAAATGGGTTTTACTAGCCAACAATACTAAAAAGGTGAG
TGAGGACTTCAATCCCATTATTTGGACTCGAGATATTTATACCCATCACG
TGACTCAATGAGCTACAGGCTACCCTGAAGGAATGACAGACACCCCGAAA
AGAATTCGGTTTTTCTTCTAGAacaaagaaatgaaatgaaactcGTTTTC
GGAGCAAGTCAGCATCATTTTTATGGCGTTTATGTAATGACTTATAATTG
ATTGCCTTCTTTACAGCTATATCGACATTCCTTCTACGCTGACTATTATG
TAAAAGAGAGATCTACAAATAGgtaatattattttgttttcacaaaAACA
AGTTATTAGTTAAATACACGATTAATCAAAAGGTCATCCTTTCATTTAAG
CATGGGCTTAACTCGGTTGTTcggttgaaactttttttttcttttttaga
gtaATCAAACTACATAGCCCGGACGGAGATTCGGATGAGCAGATACGACT
TTGTACTTGGGCAAACAATGGAAGTGCTATTGTAAGAATGTGTTATTTAT
TTTAATTCCAATCTCTCATCATTAAGCATTGTATTATAGTCTCTGTAGTA
TCTTTATTAACAGTTACATTTGTCCCTTATTTATAAATGCACTCCAGCAT
TATAGCAAAGCTTAAATCAAACTTATATGGTACTCGATGTTTTTTTTCCG
ACACGCTGAAGgtcggaaaaacttttcatATCTGGATATTTTGCCTGGTC
ATGCAACAGAATTGTTATTTGGAAGTCTTAGCCCTTGTTTTGGGGATCGT
TGAGTCCAACCGCAATTTTCCGACCTTAACACGGGCAGTTGAATTACCCT
CCCCCACCGTTTGGCACACTCCTTCAGCTTCTGTTTGGATGGCTACTAAT
ACACCATTGGAGTATCAGATGTATTTGGAATTTGAATTCAACGAATGTAG
TGAGCCCCATTGCAAGCACAAGCTGCAGTGAAATACTGCGACgtaaaatt
ttacaattttaaaattcaaagtcGTTAGGTTAGATAGTTAAAGCGTCCCC
TCCTGAACATATAAGCTTTGTCTTCGCAGGTTTTCGTCTACAAATGCAAT
GTGTATTACATTGCGACTTTGGAAACAGAAGACATCAAGTATTACCAGTT
AACAACCAGTGGTGTTCCCAAATCTGTTTTCAATGGCGTTCCTGATTGGG
TTTACGAAGGTAAATAAAGGTTACcgtattattttttattaaaagattTA
GTCGGCTTCAGAAAGACGAAATTACGTTAGGTTTCTTTTATCAAGATCCC
GAGTCTCCTTGCATGGGTAGATTTTAACTATTTTGTCTACAGCCTGtcca
gaaaaaaagttgaacatatTGATGaagtaaaatctttaaaactcattttt
tcattctataataaattgctcaaaaaaataaattttgctcTGTTGGCACA
ATTTTGTAAGTCCGTGACAGTGATATCGTTGAATACCGAAACGCGCATGT
GTCGTTGGTATCCTTTGGGATGGTGATTTTATTCATCCTACGCTACACGT
GGTTTCTGGAGTGATCGAGACCCGACGCTGTTCCCGAGTGGGCTTCCAGT
GTGGCGTTATGGAGCGCCAAACCAGTTAAGGCTGGGTCCATGTCAACATA
TTTATTTAAGTTTTACCCCGAATATCGGCCTGGCTGACGTCAGAGAGGAG
AGACAATGACTAAAGTTAATTTCGATCAATATCTCATAAATCCAATATGT
TAGACATGTCGAGAAGTCGGGAACGAactattagcgagtttatgtatttg
cgcttttgaggacggtaaagtgactgaagtgatttggaataacccgtaAT
TCTGCCCCGCAAAATCATGGACGATAatagtgctgatttaccgtcgtcct
cagttggtcatgatctagtcaaattagaaccttaccgtctccgtcgctga
aaaacacacatacataaactcggtatcgACTCTGCCTGGCCGGTGCCATT
TCCGAACGAACTCTTTACTCTCTCCTCTTGGTAGCAGGATCTCTTTTCTC
ATTCCGATCAACACGATACTTCCCGACGAGAGGACTTGCCTCGTCCAAGT
GTTTTCTCTCCTAATGAATTCCCTATCTAACGTGCTCAAAGTGAGCTTCC
ATCCAAAGGTTTCCATTACAATAAATGTGAATATAAAAATTGTGTACCGT
GCCCTCATGACAGTGGGCTTGAAAGCTCAGTCGATAGAGTCGTGTTGGCG
CATAGATTCTATTCCACTTTTTTCCGTACACAAAAGATTTAAAATACAGA
GGAGAATTTTTCTGCTCTTCTcacttttccattttttctcatttcagaGG
AGCTGTTGTTTTCTGGGAAAGCTTTGGAGGTTTCAGCTGATGGCAAATAT
CTCTCTTACGTCAAATTCAACGCGAACCAATCGTATTTTAGTTATGCCAT
TTATGGTCACCCAAGTAAAAGCTACCCAGATATCGATCGAATCGCTTATC
CGAAGGTAATCAGGTCAACATTAAtgcatttttggacctaccgggaggtc
ctttaatttgaccgttgtccgttcgtctgttacaagcttttctcgggatt
ggctcattagttttttttaattttttgcacaatgatacaaaatagtaatg
cttaaaaagtgacggagcccgattttgaaaaagaaatttggggGAAACTT
GGGCCaaaaaaactacctaaaaatcaggttttttggactttgtgcaaaat
tgcttcattagtttttcctgacttttggcagaaagatgaagtgcaaggca
ccctaacatgtggctgaagtaatttttctcggaaaattttttttcgtcgt
caaatacggattttcgcaaatttgggccaaaaactacctaaaaataaggt
tttttggacttggtgcaaaattgcttcattagtttttcctgacttttggc
agaaagatgaagtgcaaggcaccctaacatgtggctgaagtaatttttct
cggaaaattttttttcgtcgtcaaatacggattttcgcaaatttgggcca
aaaactacctaaaaataaggttttttggacttggtgcaaaattgcttcat
tagtttttcctgacttttggcagaaagatgaagtgcaaggcaccctaaca
tgtggctgaagtaatttttctcggaaaattttttttcgtcgtcaaatacg
gattttcgcaaatttgggccaaaaactacctaaaaataaggttttttgga
cttggtgcaaaattgcttcattagtttttcctgacttttggcagaaagat
gaagtgcaaggcaccctaacatgtggctgaagtaatttttctcggaaaat
tttttttcgtcgtcaaatacggattttcgcaaatttgggccaaaaactac
ctaaaaataaggttttttggacttggtgcaaaattgcttcattagttttt
cctgacttttggcagaaagatgaagtgcaaggcaccctaacatgtggctg
aagtaatttttctcggaaaattttttttcgtcgtcaaatacggattttcg
caaatttgggccaaaaactacctaaaaataaggttttttggacttggtgc
aaaattgcttcattagtttttcctgacttttggcagaaagatgaagtgca
aggcaccctaacatgtggctgaagtaatttttctcggaaaattttttttt
ttgtcgtaaaatacgaattttcttttttgggggaaattctgttttaccat
tttcctgttagcagcttttctcgggatcggcttattatttttttttcatt
ttttgcacaatgatacaaaatagtaatgcctaaaaagtgacggagcccga
ttttgaaaaagaaatttggggTAAACTTGGGCCaaaaaaactacctaaaa
ataaggttttttggactttgtgcaaaattgcttcattagttttttctgat
ttttgtcagaaagatagagtgcaaggtaccttaaaatgtggctgaagtaa
tttttttcggaagattttttttcgtcataaaANNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgacgac
caagttacacaatgataaaagaaaataaatcagacgtttttgcattgttc
taaaacttattgtgtttgctcaataccaatagtaaaatgtagaacgccta
cttttatctgattttgatcaacaggtaggtccattcagcatgttgcttgt
ctTCCTAATTTTAATGCATCGTatcaatggaaaaaatttcactctCTCAA
GCTCTCTGGATATTGAATAGATCTTTCCCTTATGGAAGTTTTTATAGCCC
TGTCTTTCAGTAAGGATGAAACTACTCACATGGTACtgcttttgaaaact
tttgctTTTCTCGGCAAATGACCTTATTGTTGTAGCTTCTATGCAatcta
ttgagtttaaagccctaAAGTGGCTGGAGAGAAATCTTTAACCtatctca
agcaagaaaaagtgaaactttaAGATTTGAGCCGCATTTAGAATGACGAA
TTGAATCTagccctttctttgtttttgcgCAACCGGGcctttagaccatg
ttcacacacTACTGTTCCATTTCGCTCAGggatgattttcgttacggatc
gagggTATTcgtattggtttcggaacggaGCAGTTTCGTTCCGAtgaaaa
agtggagcgaaacctttttgatctgttttgctttgtgaCGTCTTCTTTCT
Tgatgtttcgaattttgacgttcacacttgtttcggaactgtttcgtttc
ggaacggaaagaaaccgtaacgtctgaacatggtcttaaagTCAATGATA
TAATCCTGTAGTATCTTTAACTTCCTTTTTTGACGATCGGCGTGGTGTTC
AATGTTAGTTTTATTATTGTTCTTCCAGGCTGGTTTTCCGAACCCAACCA
tcgaaatcaaaatcatcaatcTGCAGAGTGTCTTGCAAGAAGATAatagt
gtcaaaaatttcacCCAATATAAAAAGATCCTAAGTCCACctgctaaaat
ctcaaaagggTGAGTCCGTGATTGAAGATTAACTCAAATTCAACACGAGA
ACATACCGATGTTGCAGGGGAGGATAGTGTCCTTTcctttttatatcaat
tttcaaCAACAGCCCTCCTCCTTGCATGATTTGAAACTGAAAGATTAAAA
TGTCTTCCCTCTAAGCTATTAATAGAAGAAATGATATGGAAATATTACAG
AGGATTAATTGAGATGAGTGTTTCCTTTTCATTTCTACCAGTGATTATTA
TTATTGCATTATGACTTGGAGTCCTGGGAACGAGTTGTATGTCCAATGGA
TGAACCGTGCTCAAAACGAGACTGTTTGTATGAAGTACGATTCGACAAAC
GGACAACCAACAACTGTAAGTTTATGAAAGTActtcccagctggtacaca
acgttgactcaacgttcatctaacgttatatggacgttgtgaacgttgtG
TGCTTACAGTTgattctcgctaattcgaactcgaaaggGGAATATTGGTT
TTTTCGAATTAAGGAGAAATTCGAGTTaaagcatgattatttcatagagg
tcgatagacctgggaaatatattactgtaaattaaGTTGAGAAATTAAAT
TAAGAGGGTTTCGCCTTGACGGAAATtgggaataagttcgaattatagaa
agattcgaataagagaagttcgaataagcgagtcCAGTGTATTAGCCAGG
GcccaaaacatttcaaattcaacGTTGAGTGATTCTGATTTAAACGATAA
GAGTTAAAAATGGAATAAATCTTTTTCAGCTTCAAGAATACAATACACCA
GGTGGATGGATAGACGATGATGTAGGTGACATTACtaattcatcattttt
caatCTGCTGCTTTTTTCCAGTACTAGAAATTGTTTTCTAACAATCTCGT
TTTGCAACGGGGGAAAGTGCTTCGTATGTTTTGTATGTTCAGGTTTCCAA
GTTTCCAACTGTTTTAAAGAATAAGAAAAACAATGAACATCCAGAAATGT
TTATCTAAGGgtcgtaattttcaaaaaagcaacaaaaatgttaaaaaact
cTTTTGGAGAACGTCTCCGTAAGTAGCAGACTCTGCCTCTTGTCCGGCAT
CCTTCAAACCTAATAAATTCCGGGTATTTTGCATTCCTTATTGTAAACAA
ACTTAAAGAGGTCAACGTGCATTCTTTCAGTACACCAAACCAAAGTTTGC
CAAAGACAATTCCAATTATATCACGCTATTGCCACACGAAGATTTTCGAC
ATTTGGCTAAAGTCTCGATGAATCCCaaggtatgaacttaatttttccTT
CTATCAGGAGGCTAATTAGCTAGAGGGATGCTAGCAACCTAACCGTTAGG
ATTTTTAGGGTTTTAACCGTTTGATTTTTACCAGAACCTTTTTTGACGGC
CGTTAGTCACAGAGGATTGCTttacttaggcaaaaagagATACAGGGATA
AACGAATGACCTGGGGAACCGTTTCAAATCCGTCAGACTCGAGCATAGCT
TttgaaaaacacaaattaaaaaattagcCTCTTTTAGCCTACCTTTTTAT
GAAAAACCCATCAGAAACACACCCCTTGAATCGACAAGGATAGTCCCTTA
AGCCCCCCGTAAAGGCCGTAAAATCCGAAAGGAGAAGTTTGTATTTCACT
AGCCTATAATAATTGTTTCCGCGTTTCGTTTAGAATGGCCCTGAAGTGGA
GTTTTTGACGGATGGAAAATTCATGGTTGTGGATATCAACTGTTACAACG
CGGATGATCAAATTTTGTAAGTTGGACTCATTTCCAAACCACCTTCAATA
TATTACTTCAAGAGAAGCATGAGAAAAATTGTAAATCATTTTCCGCTGTc
tcattttttttcagatattaTCGAAGCACCCAAGAATCTCCTGCACAACG
TCATGTCTATCGAATCAATTTACAAACCAAAGAAAACAGTTGTATCACTT
GTGACTTGTTGAAAGGTAAGACATGCAACTTTACAGAACTCTTCTAACTG
GTGGAACAACTTTAACACGGAGGGCTTAAAATGCTTAATACATTCGCTTA
AACTTCTAGACTGATTCCCTGACCTCTAAGGATAAATTCCTAAATAGAAA
TTATAACCGTGAAGTTTTTTCGTTAGAGAATGGATAAACTAATTTTTAGC
TCAAATAGTTGGATAGAGTGTCGTCCAACAGCCTTCTTATTTCTGCcgag
aaaatttgaagaatacTGAAAGCAGAACAGAAAGCTCAACCCACTTTTCG
TACTTTTGGTTAATTTTTTGAGCTTTGTGAGTTATGATAACGCGCTTAAC
ATGTCTATGTGAAAATTAGGTTGTTAGGTTATACAAGTTCATCTGTGCAT
TCATTGAGCAGagtcttttagtgagttaaagcATGGTGTTTGTTTTTCCT
TTCTGGTAGTTTACATATCTCGTTTGCAGGCTTGATTACTTCCGCGATGA
AGAATAAATGTTTCACCATTTCTGGTCTGTATTACAAAGGGACGAGATTT
CTGGATTTCTAATATATTTCTATTGCATTATTGTAGACAGTGATGGCACC
AAATGTACATATCACGATATTGTCTTCAGCAAGAAGTGTACGTATGCAAC
CATCAACTGCAAAGGACCTTACGTACCCGTATCTTACATGGTCAATATGG
AAACAATGAACGTACAAAACCTAACGTCTAATGAACATGTTAAAGACTTA
TTAAGTAGGAAAGCGTTACCGACAGAGAAATTTTATACTATAAAATCTGA
TGGGTGGGATATTCACGTTAAAGAGACACGCCCTGCGGGATTTGACCCCA
AGAAGAAATATCCGGTGTTGTTGAGTGTTTATGGTGGTCCAAGCACGCAA
AAggtaaaagaaattttctttggaaGTTATTCCCTTTAGGTGTTGATTGG
CTTAATAATTATATGGAGAAGTAGAAAATCCCTTTGAAGCTATTTCCTTA
CAGGGATGCTAGAAAGCCTGTAAAGTATACAGAAAAATACATTTTGGCTT
TCGGAAAGAAAATTAACCTCACGGTCTGTAAAACAAATGGTTCTCTACCA
GCCAGTCGGTCTGATGACAATAGCttgaaaaatttagcaaaaaaaaattt
agcctTTTCTTATTCAAAAAGTTCTCAATACACGTCTTGAAGGTTGTACT
GTAAATGCAAGGTGTTTCTGATGGACTGATTCTTTACAATCCTCGCAGGT
GACAGATCGGTACAGTTACGGATTCGATCACTTTTTGGTATCTTCGCATG
ATATTATTCTCATTAACTTCGATGCTAGAGGAGCTGGTTACTATGGTTAC
AAGTATGTTCGTTTAACATTAGCGAGGTTAATTTTGACtgtaaagtgcga
taccgtaggcctgtatataacttgccaaagcaaatcatacaagtgaaatc
ttatgtaaAGGCCTACGATATCTCATTGAAAGGTCTAAATAAAAACTACT
CAATTCTGAAAGGAAATAACTGTTTCACGCTGAAATATTGTGGTAGCATG
ACATGCATGTCgtttattttcattcagtttattcaaaacaatctcAGTAC
TACAGTTAAGCAAATAAAGACTAAAGTCAGACTAGATCCCGATTCCATAT
TCCTCCTTCTATTGGTATAAGTCGTACCAGCGTactttacaaatttgaaa
tctATTTTCGATTTATAATTGGATGCTCTGACGTTTTTCCCGGACAATTC
AACTTTACGCTCCCTTTTCAGTAGAAGTTTTCCTGAGCTAAATTTAATGT
GTAAAAGTTTACTTTCTGTTCCTTTCTTTAGGTTTATGTACGCAGTCTAC
AAACAACTTGGTCATTATGAAGCCGTCGATGCCGTTAACGTTGGCAAGTA
AGTCCACTTGTGCTTGTATATCGTTGCTTGGGGCTCGAAAAAAGATCCCG
ATCATTTATCTATTGGAACTTTAGTAAAGCAGGGTTACTAAAACCCAAGT
ATTTGATCATTGACACGGGCAATTATTCATGAAGAAATAGATAAAAATCA
GCTTCCATTCGATGTTAAGTTTGGAGATGTATACCCAGCATTCTATTTTT
TGCGTGTCCCTGAATTTTATACATGACAGTCCACAAATCTCAGAATTTTA
GTTCTCACTTTTGTAACAAAATAAAGGTTAAGGCCACTGGACTTTCATAT
TTCATTTATTCACTTTCCAGGTACTTAAAAACACAACCTTACGTTGACCC
AAAGAAAATCGCTATTTGGGGCTGGGTGAGTAAAAATGTGCTTGTTAATC
CTACTGGCATCAAACATTAAAGAACGGTCATCTCAGGTCCatcgaaaata
tcaaaaaacgtTCTTCTAACATCAGCAAACCCGAACTAACGTTGAAACAC
AATCTCGTTCCCTGTGCCATCAGTAAGCaccaaaaagctgataatacact
AGCGTCAaccagtaacgtaaataaagcctgggatgcacggggacgaggtt
ggccGAAACACTGTTATGAAACAAGTTTatagaaaagtgaaaaagttttc
aatctTGATAATATTTCTTTTGTTCATTTCAGTCGTATGGAGGATTCTAT
TCATCAACTGTGATGGGAATGGACAGTGACGTCATCACGACGGCCGTTGC
TGTTGCTCCAGTGACTGATTGGCGTTACTATGGTAATTCTTATTTCATTA
TTATGATAACGCTACTGTAGCAACCAATTTTACGATGTTTTTTGGTCGAA
AGAGTAAGATTTCTTTAGATTACAGATTCTTTCGTTTGATGCGACTTTTG
ACCTTATTAAAAACTTTCTGCGTAGGCCTCCGATTTcctcaattcaaaat
ttcctctACTGACCTTACATACCTTAAATTTCCGGGAAATTGTATATTGA
TGACCTAACGAAAACTTCCTATCCAGTGGTGATTTACCTCATCTTTCATA
AGTACGAGCTTTCAAAATATGctcacacttttttgaaaaataacctttTT
TGGCCTTATATAGTGATCATGACCTATTGACAAATGGCCGGTTTGAATAA
ATGTTTGACGCGCATGATCCATTAACAATCAATCCCAGGATCTTATACTT
TTGTTTCTACTTTAGATACTGTTTACACTGAAAGATATATGGGACTGCCT
ACACCAGAAGATAATATTGCTGGGTATCAGGTTAGTAGAGTGGCTCAGTC
CGGAAGAAGCCATATAATCCTATTAACTTTCGTCTATAAAACCGAACTGA
CCAAACTAAATCTAAAGGTGATGTCTAAGTTTTCTTGAGTGGAGTTTAAC
TCTTGCATGATTAGAATAACCGTCGTAATATTACGTATTTTCGAATCTAT
GATAACAGGAACATTGATATCTTGATTTTTACTAGAGTACGAGTGTCTTG
AGCATGACAAAGAACTTCAGAGGGAAGAACTTTCTACTGATACATGGCAC
AGCAGATGGTGAGAAACCATTTCATTGTATAGTGCTAATTAGTTTCATAC
TCGTTTACAGGCCTCCCAGAGAAGTCACTGATTACGCAATCACACCAAAA
TAATCCAATGACGATCTtgtatcgttttttttttcatcaaaaatctCTTA
CATCAAATTTCTTGTCCATTGAACTACTTTTAATTCAAAACTTTTATGCA
CttctaaattttctttcgtAGATAACGTCCACTTTCAAAACGCAGCTCAA
CTATCTGCAGCTTTGGTCAGAGATAAAGTCAAATTTCGAGGACAGGTGTG
TTTCACTTTTGCCAGCATCGACTGGTATTTTTAATGGTTATTTCAATTGT
TAATTTGCGATCTTTTCTCTTATGGAGTTAAATTTagaccaaaaaaattg
aaatgaaaattttaattctccTACATAGAGGTTACTAGCTTTATCATTTC
CTTTTTGGTTTTTGGTGAGTTGACTATTTTATAAGAAGCTTTTCAATGTT
CATCATTTTCAGTTTTACACGGACAAGAGACATTCAATACAAACGAGTNG
CAACCAATTTTACGATGTTTTTTGGTATTTAGTGCTACCTTGGACTCTGA
TAGAGTTCAATCCTCCCAGCTtagaaaaacataaaataagcaaatttctt
tttcgtatagtctatttgatttgatttttttttttaacaaagttaATCTT
TGGACGATTTTTTGTTAGTCGTTTACCGTCTAGTGGTAGCTTTATTACCA
ATCATTTGTTACTCAATTTTATCGTGAAAGATTAACGGACAGATTCTTTC
GTTTGATGCGACTTTTGACCTTATTAAAAACTTTCTGCGTAGGCCTCCGA
TTTcctcaattcaaaatttcctctACTGACCTTACATACCTTAAATTTCC
GGGAAATTGTATATTGATGACCTAACGAAAGCTTGCTAACCAGTGGTGAT
TTACCTCATCTTTCATAAGTACGAGCTTTCAAAATATGctcacacttttt
tgaaaaataacctttTTTGGCCTTATATAGTGATCATGACCTATTGACAA
TAATAGCCGGTAAATGGGCGTTTTTCTTCGAGTAAATGTTTGACGCACAT
GACCCATTTACAATCAATCCCAGGATCTTATACCTTCGTTTCTACTTTAG
ATACTGTTTACACCGAAAGATATATGGGACTGCCTACACTTGAAGATAAT
ATTGCTGGGTATCAGGTTAGTAGAGTGGCTCAGTCCGGATGAAGCCATAC
AATCCTATTACCTTTCGTCTATAAAACCGAACTGACCAAACTAAATCTAA
AGGTGGTGTCTAAGTTTTCTTGAGTGGAGTTTAACCCTCGCATGATTAGA
ATAACCGTCGTAATATTACGTATTTTCGAATCTATGATAACAGGAACATT
GATATCTTGATCTTTACTAGAGTACAAGTGTCTTGAGCATGACAAAGAAC
TTCAGAGGAAAGAACTTTCTACTGATACATGGTACAGCAGATGGTGAGAA
AGCGTTTCATTGTATAGTATACTTAGTTTCATACTCGTTTACAGGCCTCC
CAGAGAAGTCACTGATTACGCAATCACACCAAAATAATCCAATCACGATC
CTGTACCgttttttataaataagaaatgaattaaaattaaatcaaaaatc
ttgTACATCAAATTTCTTGTACATTGAACTACTTTTGTGAACATTGAACA
CGTCGCTCCCCTCGTATACTACGAACTAGTGTAATAGCAACGAATCGATA
GCGcagttgggagagcaatcgcccggcaagcgagaggtcgtgggttcaat
ccccactcgatttgttacctttgagaaaactgggaagtacattagtgcat
gatccgttgattcattactgAACTACTTTTAATTCAAAACTTTTATGTAC
TTCTAAATTTTCCTTCGTAGATAACGTCCACTTTCAAAATGCAGCTCAAC
TATCTGCAGCTTTGGTCAGAGATAAAGTCAAATTTCGAGGACAGGTGTGA
TTCACTTTTGCCAGCATCGACTGGTATTTTTAATGGTTATTTTAATTGTT
AATTTGCGATCTTCTCTCTTATGGAGTTAAATTTAgaccaaaaaatttga
aatgaaaattttaattctccTACATAGAGGTTACTAACTTTATCATTTCC
TTTTTGGTTTTCGGTGAGTTGACTATTTTATAAGAAGCTTTTCAATCTTC
ATCATTTTCAGTTTTACACGGACAAGAGACATTCAATACAAACGAGCCAT
GTTTATTATTTGATTGCTGACTACCTTATGGCGCATCTGAGAAATGTTGA
AATCCCCGCTGATTCAGTATTCGGACTAAAAAATTACCCACTCAAATGAA
GAAGAAGGCTAGTCAAACCTGAATTAAAGCATCTTTTGTCAAATTAAGAA
CTTAAAAGCAGATAAAGTTTAGTTCGAAGAAAGTCTCCGTGGTGGACAAT
GGAAAGTGTTGGCGGGTAAGAGACCATGGTGAAGCCAGGACATCTAAAGA
TAAAGAGCTCCCACGCATTTGCTTCGATGCTGGGAGGTTATCATACTGAA
TGCAGAATCGATGAATGCGCTTCCAGGTTGGTTATTCACTTAATTAAGAA
AGAGGACGAATATATTTGAAAATCCAATTTTGGTTAATGACTGCAAATCT
GCAAATTGACATTTTGTTGGGTTGGCAATAATTGAGGAAACCAACGAATG
TTGTTTTTCGaaggttaaattttgattttcttataaaataatgtAATCGA
GATCAAGTgctaaaaatcattcaaaatctGCTTTGAAACGAAAAAAAGAA
AGTGATATTTCGTTTCAGCTTAACTCATGCGGAAATCCTACGTTATATAC
ACATTTTTGCTTTTAGATAAAAATACTTCAAAACTGCATTGCAAAATGTG
AAACTTTaaggaaagtttatttttgagTTAAGTACTTCTGGTGTTCTCAA
ACAAAGTATCTCTCCTGATTTCCCAAAGTGCAGTGATAGTGACAAGTCAT
GTTCATAATCCTAAGGCTGAAAAGGATTTGAAACAAGCGAGGGGTAAATT
ACTCAGAAAacatgattttttaaaaagaataaaagaatcGTACCAAACCT
TTGTGATTGATCTCCCCCCCCCTCGGTGACATAGAAATGTTTTGGCACGT
acgtagacgatgctatcgtccgtttagagggtcagtaaacgTGAGAAAGT
ACAGAGTCAGGAcatcagggcggtttacggggaaaaagtggcggtagagt
tttggaacaatgTTAGACAATAATTTTTACACTGTAAACACCTCTGCCAC
TGTTTACTCCACCCCAAACTAAACTCGTTCTCAAATTTATCCCGCTTCCT
GGATTATTCCCTTTTTCAGTGAtaatgtgtagacgataggatcgtcagCA
CGTACTTTGTGACATTATCTtgtataattttgattttttaattttgttta
ataattgtttattatttactatgtgtaaaagaaaattatattGTGTAAAT
TGAATTTTAGATGCCCGAACAATACCCGCTAAATATAATGAAAGAAATTA
TCGTCActaaatcgaaa

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_037992	XLOC_037992	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_341	supercontig	scaffold_341:309400..325216 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.000467418	0.000424493	0	0	0.00130887	0.000459392	0.95012	0.464548	0.0019692	0.00828157	0.00360007	0.005756	0.583205	0.0428595	0.0179308	0.0120287	0.0143465	0.00393744	0.012922	0.0230094	0.0319432	0.007931	0.00417258	0.0289168	0.0627606	0.560431	0.16641	0.327464	0.00230594	0.0250433

Blast

[Close]

BLAST of TCONS_00060390 vs. Swiss-Prot (Human)
Match: DPP4 (Dipeptidyl peptidase 4 OS=Homo sapiens GN=DPP4 PE=1 SV=2)

HSP 1 Score: 393.66 bits (1010), Expect = 3.049e-120
Identity = 247/749 (32.98%), Postives = 413/749 (55.14%), Query Frame = 1

Query:  112 RRFTLDEVFLRKYTPRTASIYWVSDDNYLDFSDGIVRKSITNSTYSDRILTRQEMVDNRISRSLA--RLSPDNKWVLLANNTKKLYRHSFYADYYVKERSTNRVIKLHSPDGDSDEQI----RLCTWANNGSAIVFVYKCNVYYIATLETEDIKYYQLTTSGVPKSVFNGVPDWVYEEELLFSGKALEVSADGKYLSYVKFNANQ-SYFSYAIYGHPSKSYPDIDRIAYPKAGFPNPTIEIKIINLQSVLQEDNSVKNFTQYKKILSPPAKISKGDYYYCIMTWSPGNELYVQWMNRAQNETV--CMKYDSTNGQPTTLQEYN----TPGGWIDD-DYTKPKFAKDNSNYITLLPHED-FRHLAKVSMNPKNGPEVEFLTDGKFMVVDINCYNADDQILYYRSTQ--ESPAQRHVYRINLQT-KENSCITCDLLKDSDGTKCTYHDIVFSKKCTYATINCKGPYVPVSYM---VNMETMNVQNLTSNEHVKDLLSRKALPTEKFYTIKSDGWDIHVKETRPAGFDPKKKYPVLLSVYGGPSTQKVTDRYSYGFDHFLVSSHDIILINFDARGAGYYGYKFMYAVYKQLGHYEAVDAVNVGKYLKTQPYVDPKKIAIWGWSYGGFYSSTVMGMDSDVIXXXXXXXXXXDWRYYDTVYTERYMGLPTPEDNIAGYQSTSVLSMTKNFRGKNFLLIHGTADDNVHFQNAAQLSAALVRDKVKFRGQFYTDKRHSIQTS----HVYYLIADYL 2283
            + +TL +     Y  +  S+ W+SD  YL   +  +   + N+ Y +  +  +    +    S+    +SPD +++LL  N  K +RHS+ A Y + + +  ++I        ++E+I    +  TW+  G  + +V+  ++Y    +E  ++  Y++T +G    ++NG+ DWVYEEE+  +  AL  S +G +L+Y +FN  +     Y+ Y   S  YP   R+ YPKAG  NPT++  ++N  S+    +SV N T  +  ++ PA +  GD+Y C +TW+    + +QW+ R QN +V     YD ++G+   L        +  GW+     ++P F  D +++  ++ +E+ +RH+    ++ K   +  F+T G + V+ I    +D   LYY S +    P  R++Y+I L    + +C++C+L    +  +C Y+ + FSK+  Y  + C GP +P+  +   VN + + V  L  N  +  +L    +P++K   I  +      +   P  FD  KKYP+LL VY GP +QK    +   +  +L S+ +II+ +FD RG+GY G K M+A+ ++LG +E  D +   +      +VD K+IAIWGWSYGG+ +S V+G  S V    +AVAPV+ W YYD+VYTERYMGLPTPEDN+  Y++++V+S  +NF+   +LLIHGTADDNVHFQ +AQ+S ALV   V F+  +YTD+ H I +S    H+Y  ++ ++
Sbjct:   41 KTYTLTDYLKNTYRLKLYSLRWISDHEYLYKQENNIL--VFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI--------TEERIPNNTQWVTWSPVGHKLAYVWNNDIY--VKIE-PNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSL----SSVTNATSIQ--ITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKK---DCTFITKGTWEVIGIEALTSD--YLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCEL----NPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRV--LEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFI 759

The following BLAST results are available for this feature:

BLAST of TCONS_00060390 vs. Swiss-Prot (Human)

BLAST of TCONS_00060390 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DPP4	3.049e-120	32.98	Dipeptidyl peptidase 4 OS=Homo sapiens GN=DPP4 PE=...	[more]

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TCONS_00060390 (transcript) - C. hemisphaerica