TCONS_00060389 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00060389
Unique Name	TCONS_00060389
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3570

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_341:309284..325216+

transcript sequence

>TCONS_00060389 ID=TCONS_00060389|Name=TCONS_00060389|organism=Clytia hemisphaerica|type=transcript|length=3570bp
ATTGTTCTTGTCCTCTTGATTCTCATCTCAATCACCCTCGTCCTCGTTTT
CACACTAGCCCTCAAAAAAGACAaagaattGAGTTCGGAAACGTTGATCA
GTCCAAACAGACGATTTACATTAGACGAAGTTTTTCTAAGGAAATATACA
CCACGCACTGCAAGCATTTATTGGGTGTCAGATGACAATTACTTAGATTT
TTCGGACGGCATTGTCCGAAAATCGATCACCAATTCAACTTACTCTGATC
GGATTCTCACACGACAAGAAATGGTTGACAATAGAATCAGTCGTTCACTA
GCCAGACTTTCGCCAGATAATAAATGGGTTTTACTAGCCAACAATACTAA
AAAGCTATATCGACATTCCTTCTACGCTGACTATTATGTAAAAGAGAGAT
CTACAAATAGagtaATCAAACTACATAGCCCGGACGGAGATTCGGATGAG
CAGATACGACTTTGTACTTGGGCAAACAATGGAAGTGCTATTGTTTTCGT
CTACAAATGCAATGTGTATTACATTGCGACTTTGGAAACAGAAGACATCA
AGTATTACCAGTTAACAACCAGTGGTGTTCCCAAATCTGTTTTCAATGGC
GTTCCTGATTGGGTTTACGAAGaGGAGCTGTTGTTTTCTGGGAAAGCTTT
GGAGGTTTCAGCTGATGGCAAATATCTCTCTTACGTCAAATTCAACGCGA
ACCAATCGTATTTTAGTTATGCCATTTATGGTCACCCAAGTAAAAGCTAC
CCAGATATCGATCGAATCGCTTATCCGAAGGCTGGTTTTCCGAACCCAAC
CAtcgaaatcaaaatcatcaatcTGCAGAGTGTCTTGCAAGAAGATAata
gtgtcaaaaatttcacCCAATATAAAAAGATCCTAAGTCCACctgctaaa
atctcaaaaggTGATTATTATTATTGCATTATGACTTGGAGTCCTGGGAA
CGAGTTGTATGTCCAATGGATGAACCGTGCTCAAAACGAGACTGTTTGTA
TGAAGTACGATTCGACAAACGGACAACCAACAACTCTTCAAGAATACAAT
ACACCAGGTGGATGGATAGACGATGATTACACCAAACCAAAGTTTGCCAA
AGACAATTCCAATTATATCACGCTATTGCCACACGAAGATTTTCGACATT
TGGCTAAAGTCTCGATGAATCCCaagAATGGCCCTGAAGTGGAGTTTTTG
ACGGATGGAAAATTCATGGTTGTGGATATCAACTGTTACAACGCGGATGA
TCAAATTTTatattaTCGAAGCACCCAAGAATCTCCTGCACAACGTCATG
TCTATCGAATCAATTTACAAACCAAAGAAAACAGTTGTATCACTTGTGAC
TTGTTGAAAGACAGTGATGGCACCAAATGTACATATCACGATATTGTCTT
CAGCAAGAAGTGTACGTATGCAACCATCAACTGCAAAGGACCTTACGTAC
CCGTATCTTACATGGTCAATATGGAAACAATGAACGTACAAAACCTAACG
TCTAATGAACATGTTAAAGACTTATTAAGTAGGAAAGCGTTACCGACAGA
GAAATTTTATACTATAAAATCTGATGGGTGGGATATTCACGTTAAAGAGA
CACGCCCTGCGGGATTTGACCCCAAGAAGAAATATCCGGTGTTGTTGAGT
GTTTATGGTGGTCCAAGCACGCAAAAgGTGACAGATCGGTACAGTTACGG
ATTCGATCACTTTTTGGTATCTTCGCATGATATTATTCTCATTAACTTCG
ATGCTAGAGGAGCTGGTTACTATGGTTACAAGTTTATGTACGCAGTCTAC
AAACAACTTGGTCATTATGAAGCCGTCGATGCCGTTAACGTTGGCAAGTA
CTTAAAAACACAACCTTACGTTGACCCAAAGAAAATCGCTATTTGGGGCT
GGTCGTATGGAGGATTCTATTCATCAACTGTGATGGGAATGGACAGTGAC
GTCATCACGACGGCCGTTGCTGTTGCTCCAGTGACTGATTGGCGTTACTA
TGATACTGTTTACACTGAAAGATATATGGGACTGCCTACACCAGAAGATA
ATATTGCTGGGTATCAGAGTACGAGTGTCTTGAGCATGACAAAGAACTTC
AGAGGGAAGAACTTTCTACTGATACATGGCACAGCAGATGATAACGTCCA
CTTTCAAAACGCAGCTCAACTATCTGCAGCTTTGGTCAGAGATAAAGTCA
AATTTCGAGGACAGTTTTACACGGACAAGAGACATTCAATACAAACGAGC
CATGTTTATTATTTGATTGCTGACTACCTTATGGCGCATCTGAGAAATGT
TGAAATCCCCGCTGATTCAGTATTCGGACTAAAAAATTACCCACTCAAAT
GAAGAAGAAGGCTAGTCAAACCTGAATTAAAGCATCTTTTGTCAAATTAA
GAACTTAAAAGCAGATAAAGTTTAGTTCGAAGAAAGTCTCCGTGGTGGAC
AATGGAAAGTGTTGGCGGGTAAGAGACCATGGTGAAGCCAGGACATCTAA
AGATAAAGAGCTCCCACGCATTTGCTTCGATGCTGGGAGGTTATCATACT
GAATGCAGAATCGATGAATGCGCTTCCAGGTTGGTTATTCACTTAATTAA
GAAAGAGGACGAATATATTTGAAAATCCAATTTTGGTTAATGACTGCAAA
TCTGCAAATTGACATTTTGTTGGGTTGGCAATAATTGAGGAAACCAACGA
ATGTTGTTTTTCGaaggttaaattttgattttcttataaaataatgtAAT
CGAGATCAAGTgctaaaaatcattcaaaatctGCTTTGAAACGAAAAAAA
GAAAGTGATATTTCGTTTCAGCTTAACTCATGCGGAAATCCTACGTTATA
TACACATTTTTGCTTTTAGATAAAAATACTTCAAAACTGCATTGCAAAAT
GTGAAACTTTaaggaaagtttatttttgagTTAAGTACTTCTGGTGTTCT
CAAACAAAGTATCTCTCCTGATTTCCCAAAGTGCAGTGATAGTGACAAGT
CATGTTCATAATCCTAAGGCTGAAAAGGATTTGAAACAAGCGAGGGGTAA
ATTACTCAGAAAacatgattttttaaaaagaataaaagaatcGTACCAAA
CCTTTGTGATTGATCTCCCCCCCCCTCGGTGACATAGAAATGTTTTGGCA
CGTacgtagacgatgctatcgtccgtttagagggtcagtaaacgTGAGAA
AGTACAGAGTCAGGAcatcagggcggtttacggggaaaaagtggcggtag
agttttggaacaatgTTAGACAATAATTTTTACACTGTAAACACCTCTGC
CACTGTTTACTCCACCCCAAACTAAACTCGTTCTCAAATTTATCCCGCTT
CCTGGATTATTCCCTTTTTCAGTGAtaatgtgtagacgataggatcgtca
gCACGTACTTTGTGACATTATCTtgtataattttgattttttaattttgt
ttaataattgtttattatttactatgtgtaaaagaaaattatattGTGTA
AATTGAATTTTAGATGCCCGAACAATACCCGCTAAATATAATGAAAGAAA
TTATCGTCActaaatcgaaa

Run BLAST on NCBI

transcript from alignment at scaffold_341:309284..325216+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00060389 ID=TCONS_00060389|Name=TCONS_00060389|organism=Clytia hemisphaerica|type=transcript|length=15933bp|location=Sequence derived from alignment at scaffold_341:309284..325216+ (Clytia hemisphaerica)
ATTGTTCTTGTCCTCTTGATTCTCATCTCAATCACCCTCGTCCTCGTTTT
CACACTAGCCCTCAAAAAAGACAGTAAGTATTTTCTAGATCAGTCTTGTC
TGCAATTTATACTACTATCATTGTTCTTGTCCTCTTGATTCTCATCTCAA
TCACCCTCGTCCTCGTTTTCACACTAGCCCTCAAAAAAGACAGTAAGTAT
TTTCTAGATCAGTCTTGTCTGCAATTTATACTACTATCATTGTTCTTGTC
CTCTTGATTCTCATCTCAATCACCCTCGTCCTCGTTTTCACACTAGCCCT
CAAAAAAGACAGTAAGTATTTTCTGGATCAGTCTGGTCTGCAATTTATAC
TACTATCATTGTTCTTGTCCTCTTGATTCTCATCTCAATCACCCTCGTCC
TCGTCTTCATACTAGCACTCAAAAAAGACATTAAGTATTTTACTGACCAG
TATGGTCTGTAATTTATACTTCATGTAGTTCCCGGACCAACATAATTGTT
CTTGTCCTTTTGATCTTATTTAATCAACCTCATCCTTGTTGCTTCAAATT
AGCTCTAAACAGaaagtaaatattttaatgagtagtctggtctgtaattt
ataGTTTATCTTATTCCAAGACCAACATCATTATTCtagtcatttttgtt
tttatctcaATCACCCTCGTCCTCGTTTTAATACTAGCTCTCAAAAAAGA
CAGAAAATCTTTTACGGGCCAATctgtcaaaacaaacaaaagagaTTCCA
ACAAATCAACCTCGTACCCAGAGTCCATTgaaccactttttgattttact
catGAACGTGTTCGTTCAACTGTGAGAGCTATCATCGTAATCATAAAGTG
AACAAAGGGAATGGGTTCGAGTTTGTCTAATAAACAAAACTctaattctc
aaattttcagaagaattGAGTTCGGAAACGTTGATCAGTCCAAACAGACG
ATTTACATTAGACGAAGTTTTTCTAAGGAAATATACACCACGCACTGCAA
GCATTTATTGGGTGTCAGGTAAGATAATAATCTAAGTCCTGGAAATTCTA
CCTATGATAATAATTATTAGGACAATCGCTCCATGGACAATCttatattg
taattttttttcataagatgGAGAGGTGATAAcactaaaaagttaaaata
tttattttctctgtctttggaaatattttatgaaagGAGCTGCTTCAGAT
AACAAAATTCCGGAGTAGTTTCCCGGGCGAAGACAGTCAATCGGGATGAC
GATCCTTATTATCTGGGAAAATGATTTGACtcattttggctttttttaaa
tatcaacTGCAACAGCTAAACAATCTTAATTTCAAAATCCTTTCTTTCAG
ATGACAATTACTTAGATTTTTCGGACGGCATTGTCCGAAAATCGATCACC
AATTCAACTTACTCTGATCGGATTCTCACACGACAAGAAATGGTAAGTTA
ACTTCTTAAGGTCGGAATCCTGATAGAGATTGAGATTTGAAAACTAGTCG
AAGTCTCTCGGTTTACGCTACCATCTTAAATGAATTGATATGCACTCCTT
GAAAGGAGCACAAAAAAAATGGCCTTggtttttaacatattttttctGTG
GAGATTGTTGGAGCATTAAGTAGAAAAGATGAAGGGCCCGAGTCAAATTT
CGAAAACCTACACTGAATTTAGGCTTTTCGACATGTTTTCATAGCTATAT
TTCAATAAATCTTCAACAACATTTTCACTATTATTGTTAAATTGTTAAAT
TCAGTTGTGGACAGTAAATGTGAAAGCAATTAAAAGAACAATCTTCACAT
TGTTTCAAATCAtcttattttatgttttagGTTGACAATAGAATCAGTCG
TTCACTAGCCAGACTTTCGCCAGATAATAAATGGGTTTTACTAGCCAACA
ATACTAAAAAGGTGAGTGAGGACTTCAATCCCATTATTTGGACTCGAGAT
ATTTATACCCATCACGTGACTCAATGAGCTACAGGCTACCCTGAAGGAAT
GACAGACACCCCGAAAAGAATTCGGTTTTTCTTCTAGAacaaagaaatga
aatgaaactcGTTTTCGGAGCAAGTCAGCATCATTTTTATGGCGTTTATG
TAATGACTTATAATTGATTGCCTTCTTTACAGCTATATCGACATTCCTTC
TACGCTGACTATTATGTAAAAGAGAGATCTACAAATAGgtaatattattt
tgttttcacaaaAACAAGTTATTAGTTAAATACACGATTAATCAAAAGGT
CATCCTTTCATTTAAGCATGGGCTTAACTCGGTTGTTcggttgaaacttt
ttttttcttttttagagtaATCAAACTACATAGCCCGGACGGAGATTCGG
ATGAGCAGATACGACTTTGTACTTGGGCAAACAATGGAAGTGCTATTGTA
AGAATGTGTTATTTATTTTAATTCCAATCTCTCATCATTAAGCATTGTAT
TATAGTCTCTGTAGTATCTTTATTAACAGTTACATTTGTCCCTTATTTAT
AAATGCACTCCAGCATTATAGCAAAGCTTAAATCAAACTTATATGGTACT
CGATGTTTTTTTTCCGACACGCTGAAGgtcggaaaaacttttcatATCTG
GATATTTTGCCTGGTCATGCAACAGAATTGTTATTTGGAAGTCTTAGCCC
TTGTTTTGGGGATCGTTGAGTCCAACCGCAATTTTCCGACCTTAACACGG
GCAGTTGAATTACCCTCCCCCACCGTTTGGCACACTCCTTCAGCTTCTGT
TTGGATGGCTACTAATACACCATTGGAGTATCAGATGTATTTGGAATTTG
AATTCAACGAATGTAGTGAGCCCCATTGCAAGCACAAGCTGCAGTGAAAT
ACTGCGACgtaaaattttacaattttaaaattcaaagtcGTTAGGTTAGA
TAGTTAAAGCGTCCCCTCCTGAACATATAAGCTTTGTCTTCGCAGGTTTT
CGTCTACAAATGCAATGTGTATTACATTGCGACTTTGGAAACAGAAGACA
TCAAGTATTACCAGTTAACAACCAGTGGTGTTCCCAAATCTGTTTTCAAT
GGCGTTCCTGATTGGGTTTACGAAGGTAAATAAAGGTTACcgtattattt
tttattaaaagattTAGTCGGCTTCAGAAAGACGAAATTACGTTAGGTTT
CTTTTATCAAGATCCCGAGTCTCCTTGCATGGGTAGATTTTAACTATTTT
GTCTACAGCCTGtccagaaaaaaagttgaacatatTGATGaagtaaaatc
tttaaaactcattttttcattctataataaattgctcaaaaaaataaatt
ttgctcTGTTGGCACAATTTTGTAAGTCCGTGACAGTGATATCGTTGAAT
ACCGAAACGCGCATGTGTCGTTGGTATCCTTTGGGATGGTGATTTTATTC
ATCCTACGCTACACGTGGTTTCTGGAGTGATCGAGACCCGACGCTGTTCC
CGAGTGGGCTTCCAGTGTGGCGTTATGGAGCGCCAAACCAGTTAAGGCTG
GGTCCATGTCAACATATTTATTTAAGTTTTACCCCGAATATCGGCCTGGC
TGACGTCAGAGAGGAGAGACAATGACTAAAGTTAATTTCGATCAATATCT
CATAAATCCAATATGTTAGACATGTCGAGAAGTCGGGAACGAactattag
cgagtttatgtatttgcgcttttgaggacggtaaagtgactgaagtgatt
tggaataacccgtaATTCTGCCCCGCAAAATCATGGACGATAatagtgct
gatttaccgtcgtcctcagttggtcatgatctagtcaaattagaacctta
ccgtctccgtcgctgaaaaacacacatacataaactcggtatcgACTCTG
CCTGGCCGGTGCCATTTCCGAACGAACTCTTTACTCTCTCCTCTTGGTAG
CAGGATCTCTTTTCTCATTCCGATCAACACGATACTTCCCGACGAGAGGA
CTTGCCTCGTCCAAGTGTTTTCTCTCCTAATGAATTCCCTATCTAACGTG
CTCAAAGTGAGCTTCCATCCAAAGGTTTCCATTACAATAAATGTGAATAT
AAAAATTGTGTACCGTGCCCTCATGACAGTGGGCTTGAAAGCTCAGTCGA
TAGAGTCGTGTTGGCGCATAGATTCTATTCCACTTTTTTCCGTACACAAA
AGATTTAAAATACAGAGGAGAATTTTTCTGCTCTTCTcacttttccattt
tttctcatttcagaGGAGCTGTTGTTTTCTGGGAAAGCTTTGGAGGTTTC
AGCTGATGGCAAATATCTCTCTTACGTCAAATTCAACGCGAACCAATCGT
ATTTTAGTTATGCCATTTATGGTCACCCAAGTAAAAGCTACCCAGATATC
GATCGAATCGCTTATCCGAAGGTAATCAGGTCAACATTAAtgcatttttg
gacctaccgggaggtcctttaatttgaccgttgtccgttcgtctgttaca
agcttttctcgggattggctcattagttttttttaattttttgcacaatg
atacaaaatagtaatgcttaaaaagtgacggagcccgattttgaaaaaga
aatttggggGAAACTTGGGCCaaaaaaactacctaaaaatcaggtttttt
ggactttgtgcaaaattgcttcattagtttttcctgacttttggcagaaa
gatgaagtgcaaggcaccctaacatgtggctgaagtaatttttctcggaa
aattttttttcgtcgtcaaatacggattttcgcaaatttgggccaaaaac
tacctaaaaataaggttttttggacttggtgcaaaattgcttcattagtt
tttcctgacttttggcagaaagatgaagtgcaaggcaccctaacatgtgg
ctgaagtaatttttctcggaaaattttttttcgtcgtcaaatacggattt
tcgcaaatttgggccaaaaactacctaaaaataaggttttttggacttgg
tgcaaaattgcttcattagtttttcctgacttttggcagaaagatgaagt
gcaaggcaccctaacatgtggctgaagtaatttttctcggaaaatttttt
ttcgtcgtcaaatacggattttcgcaaatttgggccaaaaactacctaaa
aataaggttttttggacttggtgcaaaattgcttcattagtttttcctga
cttttggcagaaagatgaagtgcaaggcaccctaacatgtggctgaagta
atttttctcggaaaattttttttcgtcgtcaaatacggattttcgcaaat
ttgggccaaaaactacctaaaaataaggttttttggacttggtgcaaaat
tgcttcattagtttttcctgacttttggcagaaagatgaagtgcaaggca
ccctaacatgtggctgaagtaatttttctcggaaaattttttttcgtcgt
caaatacggattttcgcaaatttgggccaaaaactacctaaaaataaggt
tttttggacttggtgcaaaattgcttcattagtttttcctgacttttggc
agaaagatgaagtgcaaggcaccctaacatgtggctgaagtaatttttct
cggaaaatttttttttttgtcgtaaaatacgaattttcttttttggggga
aattctgttttaccattttcctgttagcagcttttctcgggatcggctta
ttatttttttttcattttttgcacaatgatacaaaatagtaatgcctaaa
aagtgacggagcccgattttgaaaaagaaatttggggTAAACTTGGGCCa
aaaaaactacctaaaaataaggttttttggactttgtgcaaaattgcttc
attagttttttctgatttttgtcagaaagatagagtgcaaggtaccttaa
aatgtggctgaagtaatttttttcggaagattttttttcgtcataaaANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNgacgaccaagttacacaatgataaaagaaaataaatcaga
cgtttttgcattgttctaaaacttattgtgtttgctcaataccaatagta
aaatgtagaacgcctacttttatctgattttgatcaacaggtaggtccat
tcagcatgttgcttgtctTCCTAATTTTAATGCATCGTatcaatggaaaa
aatttcactctCTCAAGCTCTCTGGATATTGAATAGATCTTTCCCTTATG
GAAGTTTTTATAGCCCTGTCTTTCAGTAAGGATGAAACTACTCACATGGT
ACtgcttttgaaaacttttgctTTTCTCGGCAAATGACCTTATTGTTGTA
GCTTCTATGCAatctattgagtttaaagccctaAAGTGGCTGGAGAGAAA
TCTTTAACCtatctcaagcaagaaaaagtgaaactttaAGATTTGAGCCG
CATTTAGAATGACGAATTGAATCTagccctttctttgtttttgcgCAACC
GGGcctttagaccatgttcacacacTACTGTTCCATTTCGCTCAGggatg
attttcgttacggatcgagggTATTcgtattggtttcggaacggaGCAGT
TTCGTTCCGAtgaaaaagtggagcgaaacctttttgatctgttttgcttt
gtgaCGTCTTCTTTCTTgatgtttcgaattttgacgttcacacttgtttc
ggaactgtttcgtttcggaacggaaagaaaccgtaacgtctgaacatggt
cttaaagTCAATGATATAATCCTGTAGTATCTTTAACTTCCTTTTTTGAC
GATCGGCGTGGTGTTCAATGTTAGTTTTATTATTGTTCTTCCAGGCTGGT
TTTCCGAACCCAACCAtcgaaatcaaaatcatcaatcTGCAGAGTGTCTT
GCAAGAAGATAatagtgtcaaaaatttcacCCAATATAAAAAGATCCTAA
GTCCACctgctaaaatctcaaaagggTGAGTCCGTGATTGAAGATTAACT
CAAATTCAACACGAGAACATACCGATGTTGCAGGGGAGGATAGTGTCCTT
TcctttttatatcaattttcaaCAACAGCCCTCCTCCTTGCATGATTTGA
AACTGAAAGATTAAAATGTCTTCCCTCTAAGCTATTAATAGAAGAAATGA
TATGGAAATATTACAGAGGATTAATTGAGATGAGTGTTTCCTTTTCATTT
CTACCAGTGATTATTATTATTGCATTATGACTTGGAGTCCTGGGAACGAG
TTGTATGTCCAATGGATGAACCGTGCTCAAAACGAGACTGTTTGTATGAA
GTACGATTCGACAAACGGACAACCAACAACTGTAAGTTTATGAAAGTAct
tcccagctggtacacaacgttgactcaacgttcatctaacgttatatgga
cgttgtgaacgttgtGTGCTTACAGTTgattctcgctaattcgaactcga
aaggGGAATATTGGTTTTTTCGAATTAAGGAGAAATTCGAGTTaaagcat
gattatttcatagaggtcgatagacctgggaaatatattactgtaaatta
aGTTGAGAAATTAAATTAAGAGGGTTTCGCCTTGACGGAAATtgggaata
agttcgaattatagaaagattcgaataagagaagttcgaataagcgagtc
CAGTGTATTAGCCAGGGcccaaaacatttcaaattcaacGTTGAGTGATT
CTGATTTAAACGATAAGAGTTAAAAATGGAATAAATCTTTTTCAGCTTCA
AGAATACAATACACCAGGTGGATGGATAGACGATGATGTAGGTGACATTA
CtaattcatcatttttcaatCTGCTGCTTTTTTCCAGTACTAGAAATTGT
TTTCTAACAATCTCGTTTTGCAACGGGGGAAAGTGCTTCGTATGTTTTGT
ATGTTCAGGTTTCCAAGTTTCCAACTGTTTTAAAGAATAAGAAAAACAAT
GAACATCCAGAAATGTTTATCTAAGGgtcgtaattttcaaaaaagcaaca
aaaatgttaaaaaactcTTTTGGAGAACGTCTCCGTAAGTAGCAGACTCT
GCCTCTTGTCCGGCATCCTTCAAACCTAATAAATTCCGGGTATTTTGCAT
TCCTTATTGTAAACAAACTTAAAGAGGTCAACGTGCATTCTTTCAGTACA
CCAAACCAAAGTTTGCCAAAGACAATTCCAATTATATCACGCTATTGCCA
CACGAAGATTTTCGACATTTGGCTAAAGTCTCGATGAATCCCaaggtatg
aacttaatttttccTTCTATCAGGAGGCTAATTAGCTAGAGGGATGCTAG
CAACCTAACCGTTAGGATTTTTAGGGTTTTAACCGTTTGATTTTTACCAG
AACCTTTTTTGACGGCCGTTAGTCACAGAGGATTGCTttacttaggcaaa
aagagATACAGGGATAAACGAATGACCTGGGGAACCGTTTCAAATCCGTC
AGACTCGAGCATAGCTTttgaaaaacacaaattaaaaaattagcCTCTTT
TAGCCTACCTTTTTATGAAAAACCCATCAGAAACACACCCCTTGAATCGA
CAAGGATAGTCCCTTAAGCCCCCCGTAAAGGCCGTAAAATCCGAAAGGAG
AAGTTTGTATTTCACTAGCCTATAATAATTGTTTCCGCGTTTCGTTTAGA
ATGGCCCTGAAGTGGAGTTTTTGACGGATGGAAAATTCATGGTTGTGGAT
ATCAACTGTTACAACGCGGATGATCAAATTTTGTAAGTTGGACTCATTTC
CAAACCACCTTCAATATATTACTTCAAGAGAAGCATGAGAAAAATTGTAA
ATCATTTTCCGCTGTctcattttttttcagatattaTCGAAGCACCCAAG
AATCTCCTGCACAACGTCATGTCTATCGAATCAATTTACAAACCAAAGAA
AACAGTTGTATCACTTGTGACTTGTTGAAAGGTAAGACATGCAACTTTAC
AGAACTCTTCTAACTGGTGGAACAACTTTAACACGGAGGGCTTAAAATGC
TTAATACATTCGCTTAAACTTCTAGACTGATTCCCTGACCTCTAAGGATA
AATTCCTAAATAGAAATTATAACCGTGAAGTTTTTTCGTTAGAGAATGGA
TAAACTAATTTTTAGCTCAAATAGTTGGATAGAGTGTCGTCCAACAGCCT
TCTTATTTCTGCcgagaaaatttgaagaatacTGAAAGCAGAACAGAAAG
CTCAACCCACTTTTCGTACTTTTGGTTAATTTTTTGAGCTTTGTGAGTTA
TGATAACGCGCTTAACATGTCTATGTGAAAATTAGGTTGTTAGGTTATAC
AAGTTCATCTGTGCATTCATTGAGCAGagtcttttagtgagttaaagcAT
GGTGTTTGTTTTTCCTTTCTGGTAGTTTACATATCTCGTTTGCAGGCTTG
ATTACTTCCGCGATGAAGAATAAATGTTTCACCATTTCTGGTCTGTATTA
CAAAGGGACGAGATTTCTGGATTTCTAATATATTTCTATTGCATTATTGT
AGACAGTGATGGCACCAAATGTACATATCACGATATTGTCTTCAGCAAGA
AGTGTACGTATGCAACCATCAACTGCAAAGGACCTTACGTACCCGTATCT
TACATGGTCAATATGGAAACAATGAACGTACAAAACCTAACGTCTAATGA
ACATGTTAAAGACTTATTAAGTAGGAAAGCGTTACCGACAGAGAAATTTT
ATACTATAAAATCTGATGGGTGGGATATTCACGTTAAAGAGACACGCCCT
GCGGGATTTGACCCCAAGAAGAAATATCCGGTGTTGTTGAGTGTTTATGG
TGGTCCAAGCACGCAAAAggtaaaagaaattttctttggaaGTTATTCCC
TTTAGGTGTTGATTGGCTTAATAATTATATGGAGAAGTAGAAAATCCCTT
TGAAGCTATTTCCTTACAGGGATGCTAGAAAGCCTGTAAAGTATACAGAA
AAATACATTTTGGCTTTCGGAAAGAAAATTAACCTCACGGTCTGTAAAAC
AAATGGTTCTCTACCAGCCAGTCGGTCTGATGACAATAGCttgaaaaatt
tagcaaaaaaaaatttagcctTTTCTTATTCAAAAAGTTCTCAATACACG
TCTTGAAGGTTGTACTGTAAATGCAAGGTGTTTCTGATGGACTGATTCTT
TACAATCCTCGCAGGTGACAGATCGGTACAGTTACGGATTCGATCACTTT
TTGGTATCTTCGCATGATATTATTCTCATTAACTTCGATGCTAGAGGAGC
TGGTTACTATGGTTACAAGTATGTTCGTTTAACATTAGCGAGGTTAATTT
TGACtgtaaagtgcgataccgtaggcctgtatataacttgccaaagcaaa
tcatacaagtgaaatcttatgtaaAGGCCTACGATATCTCATTGAAAGGT
CTAAATAAAAACTACTCAATTCTGAAAGGAAATAACTGTTTCACGCTGAA
ATATTGTGGTAGCATGACATGCATGTCgtttattttcattcagtttattc
aaaacaatctcAGTACTACAGTTAAGCAAATAAAGACTAAAGTCAGACTA
GATCCCGATTCCATATTCCTCCTTCTATTGGTATAAGTCGTACCAGCGTa
ctttacaaatttgaaatctATTTTCGATTTATAATTGGATGCTCTGACGT
TTTTCCCGGACAATTCAACTTTACGCTCCCTTTTCAGTAGAAGTTTTCCT
GAGCTAAATTTAATGTGTAAAAGTTTACTTTCTGTTCCTTTCTTTAGGTT
TATGTACGCAGTCTACAAACAACTTGGTCATTATGAAGCCGTCGATGCCG
TTAACGTTGGCAAGTAAGTCCACTTGTGCTTGTATATCGTTGCTTGGGGC
TCGAAAAAAGATCCCGATCATTTATCTATTGGAACTTTAGTAAAGCAGGG
TTACTAAAACCCAAGTATTTGATCATTGACACGGGCAATTATTCATGAAG
AAATAGATAAAAATCAGCTTCCATTCGATGTTAAGTTTGGAGATGTATAC
CCAGCATTCTATTTTTTGCGTGTCCCTGAATTTTATACATGACAGTCCAC
AAATCTCAGAATTTTAGTTCTCACTTTTGTAACAAAATAAAGGTTAAGGC
CACTGGACTTTCATATTTCATTTATTCACTTTCCAGGTACTTAAAAACAC
AACCTTACGTTGACCCAAAGAAAATCGCTATTTGGGGCTGGGTGAGTAAA
AATGTGCTTGTTAATCCTACTGGCATCAAACATTAAAGAACGGTCATCTC
AGGTCCatcgaaaatatcaaaaaacgtTCTTCTAACATCAGCAAACCCGA
ACTAACGTTGAAACACAATCTCGTTCCCTGTGCCATCAGTAAGCaccaaa
aagctgataatacactAGCGTCAaccagtaacgtaaataaagcctgggat
gcacggggacgaggttggccGAAACACTGTTATGAAACAAGTTTatagaa
aagtgaaaaagttttcaatctTGATAATATTTCTTTTGTTCATTTCAGTC
GTATGGAGGATTCTATTCATCAACTGTGATGGGAATGGACAGTGACGTCA
TCACGACGGCCGTTGCTGTTGCTCCAGTGACTGATTGGCGTTACTATGGT
AATTCTTATTTCATTATTATGATAACGCTACTGTAGCAACCAATTTTACG
ATGTTTTTTGGTCGAAAGAGTAAGATTTCTTTAGATTACAGATTCTTTCG
TTTGATGCGACTTTTGACCTTATTAAAAACTTTCTGCGTAGGCCTCCGAT
TTcctcaattcaaaatttcctctACTGACCTTACATACCTTAAATTTCCG
GGAAATTGTATATTGATGACCTAACGAAAACTTCCTATCCAGTGGTGATT
TACCTCATCTTTCATAAGTACGAGCTTTCAAAATATGctcacactttttt
gaaaaataacctttTTTGGCCTTATATAGTGATCATGACCTATTGACAAA
TGGCCGGTTTGAATAAATGTTTGACGCGCATGATCCATTAACAATCAATC
CCAGGATCTTATACTTTTGTTTCTACTTTAGATACTGTTTACACTGAAAG
ATATATGGGACTGCCTACACCAGAAGATAATATTGCTGGGTATCAGGTTA
GTAGAGTGGCTCAGTCCGGAAGAAGCCATATAATCCTATTAACTTTCGTC
TATAAAACCGAACTGACCAAACTAAATCTAAAGGTGATGTCTAAGTTTTC
TTGAGTGGAGTTTAACTCTTGCATGATTAGAATAACCGTCGTAATATTAC
GTATTTTCGAATCTATGATAACAGGAACATTGATATCTTGATTTTTACTA
GAGTACGAGTGTCTTGAGCATGACAAAGAACTTCAGAGGGAAGAACTTTC
TACTGATACATGGCACAGCAGATGGTGAGAAACCATTTCATTGTATAGTG
CTAATTAGTTTCATACTCGTTTACAGGCCTCCCAGAGAAGTCACTGATTA
CGCAATCACACCAAAATAATCCAATGACGATCTtgtatcgtttttttttt
catcaaaaatctCTTACATCAAATTTCTTGTCCATTGAACTACTTTTAAT
TCAAAACTTTTATGCACttctaaattttctttcgtAGATAACGTCCACTT
TCAAAACGCAGCTCAACTATCTGCAGCTTTGGTCAGAGATAAAGTCAAAT
TTCGAGGACAGGTGTGTTTCACTTTTGCCAGCATCGACTGGTATTTTTAA
TGGTTATTTCAATTGTTAATTTGCGATCTTTTCTCTTATGGAGTTAAATT
TagaccaaaaaaattgaaatgaaaattttaattctccTACATAGAGGTTA
CTAGCTTTATCATTTCCTTTTTGGTTTTTGGTGAGTTGACTATTTTATAA
GAAGCTTTTCAATGTTCATCATTTTCAGTTTTACACGGACAAGAGACATT
CAATACAAACGAGTNGCAACCAATTTTACGATGTTTTTTGGTATTTAGTG
CTACCTTGGACTCTGATAGAGTTCAATCCTCCCAGCTtagaaaaacataa
aataagcaaatttctttttcgtatagtctatttgatttgatttttttttt
taacaaagttaATCTTTGGACGATTTTTTGTTAGTCGTTTACCGTCTAGT
GGTAGCTTTATTACCAATCATTTGTTACTCAATTTTATCGTGAAAGATTA
ACGGACAGATTCTTTCGTTTGATGCGACTTTTGACCTTATTAAAAACTTT
CTGCGTAGGCCTCCGATTTcctcaattcaaaatttcctctACTGACCTTA
CATACCTTAAATTTCCGGGAAATTGTATATTGATGACCTAACGAAAGCTT
GCTAACCAGTGGTGATTTACCTCATCTTTCATAAGTACGAGCTTTCAAAA
TATGctcacacttttttgaaaaataacctttTTTGGCCTTATATAGTGAT
CATGACCTATTGACAATAATAGCCGGTAAATGGGCGTTTTTCTTCGAGTA
AATGTTTGACGCACATGACCCATTTACAATCAATCCCAGGATCTTATACC
TTCGTTTCTACTTTAGATACTGTTTACACCGAAAGATATATGGGACTGCC
TACACTTGAAGATAATATTGCTGGGTATCAGGTTAGTAGAGTGGCTCAGT
CCGGATGAAGCCATACAATCCTATTACCTTTCGTCTATAAAACCGAACTG
ACCAAACTAAATCTAAAGGTGGTGTCTAAGTTTTCTTGAGTGGAGTTTAA
CCCTCGCATGATTAGAATAACCGTCGTAATATTACGTATTTTCGAATCTA
TGATAACAGGAACATTGATATCTTGATCTTTACTAGAGTACAAGTGTCTT
GAGCATGACAAAGAACTTCAGAGGAAAGAACTTTCTACTGATACATGGTA
CAGCAGATGGTGAGAAAGCGTTTCATTGTATAGTATACTTAGTTTCATAC
TCGTTTACAGGCCTCCCAGAGAAGTCACTGATTACGCAATCACACCAAAA
TAATCCAATCACGATCCTGTACCgttttttataaataagaaatgaattaa
aattaaatcaaaaatcttgTACATCAAATTTCTTGTACATTGAACTACTT
TTGTGAACATTGAACACGTCGCTCCCCTCGTATACTACGAACTAGTGTAA
TAGCAACGAATCGATAGCGcagttgggagagcaatcgcccggcaagcgag
aggtcgtgggttcaatccccactcgatttgttacctttgagaaaactggg
aagtacattagtgcatgatccgttgattcattactgAACTACTTTTAATT
CAAAACTTTTATGTACTTCTAAATTTTCCTTCGTAGATAACGTCCACTTT
CAAAATGCAGCTCAACTATCTGCAGCTTTGGTCAGAGATAAAGTCAAATT
TCGAGGACAGGTGTGATTCACTTTTGCCAGCATCGACTGGTATTTTTAAT
GGTTATTTTAATTGTTAATTTGCGATCTTCTCTCTTATGGAGTTAAATTT
AgaccaaaaaatttgaaatgaaaattttaattctccTACATAGAGGTTAC
TAACTTTATCATTTCCTTTTTGGTTTTCGGTGAGTTGACTATTTTATAAG
AAGCTTTTCAATCTTCATCATTTTCAGTTTTACACGGACAAGAGACATTC
AATACAAACGAGCCATGTTTATTATTTGATTGCTGACTACCTTATGGCGC
ATCTGAGAAATGTTGAAATCCCCGCTGATTCAGTATTCGGACTAAAAAAT
TACCCACTCAAATGAAGAAGAAGGCTAGTCAAACCTGAATTAAAGCATCT
TTTGTCAAATTAAGAACTTAAAAGCAGATAAAGTTTAGTTCGAAGAAAGT
CTCCGTGGTGGACAATGGAAAGTGTTGGCGGGTAAGAGACCATGGTGAAG
CCAGGACATCTAAAGATAAAGAGCTCCCACGCATTTGCTTCGATGCTGGG
AGGTTATCATACTGAATGCAGAATCGATGAATGCGCTTCCAGGTTGGTTA
TTCACTTAATTAAGAAAGAGGACGAATATATTTGAAAATCCAATTTTGGT
TAATGACTGCAAATCTGCAAATTGACATTTTGTTGGGTTGGCAATAATTG
AGGAAACCAACGAATGTTGTTTTTCGaaggttaaattttgattttcttat
aaaataatgtAATCGAGATCAAGTgctaaaaatcattcaaaatctGCTTT
GAAACGAAAAAAAGAAAGTGATATTTCGTTTCAGCTTAACTCATGCGGAA
ATCCTACGTTATATACACATTTTTGCTTTTAGATAAAAATACTTCAAAAC
TGCATTGCAAAATGTGAAACTTTaaggaaagtttatttttgagTTAAGTA
CTTCTGGTGTTCTCAAACAAAGTATCTCTCCTGATTTCCCAAAGTGCAGT
GATAGTGACAAGTCATGTTCATAATCCTAAGGCTGAAAAGGATTTGAAAC
AAGCGAGGGGTAAATTACTCAGAAAacatgattttttaaaaagaataaaa
gaatcGTACCAAACCTTTGTGATTGATCTCCCCCCCCCTCGGTGACATAG
AAATGTTTTGGCACGTacgtagacgatgctatcgtccgtttagagggtca
gtaaacgTGAGAAAGTACAGAGTCAGGAcatcagggcggtttacggggaa
aaagtggcggtagagttttggaacaatgTTAGACAATAATTTTTACACTG
TAAACACCTCTGCCACTGTTTACTCCACCCCAAACTAAACTCGTTCTCAA
ATTTATCCCGCTTCCTGGATTATTCCCTTTTTCAGTGAtaatgtgtagac
gataggatcgtcagCACGTACTTTGTGACATTATCTtgtataattttgat
tttttaattttgtttaataattgtttattatttactatgtgtaaaagaaa
attatattGTGTAAATTGAATTTTAGATGCCCGAACAATACCCGCTAAAT
ATAATGAAAGAAATTATCGTCActaaatcgaaa

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_037992	XLOC_037992	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_341	supercontig	scaffold_341:309284..325216 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00150417	0.00131345	0	0	0.00381485	0.00142779	0.0187039	0.240468	0.00744094	0.0236685	0.0103349	0.0177307	0.243315	0.178015	0.010743	0.0428915	0.0463742	0.0137548	0.038788	0.0761217	0.110105	0.0247156	0.0137304	0.00912783	0.201247	0.507728	0.347318	0.306013	0.00750047	0.0704327

Blast

[Close]

BLAST of TCONS_00060389 vs. Swiss-Prot (Human)
Match: DPP4 (Dipeptidyl peptidase 4 OS=Homo sapiens GN=DPP4 PE=1 SV=2)

HSP 1 Score: 393.66 bits (1010), Expect = 2.998e-120
Identity = 247/749 (32.98%), Postives = 413/749 (55.14%), Query Frame = 1

Query:  109 RRFTLDEVFLRKYTPRTASIYWVSDDNYLDFSDGIVRKSITNSTYSDRILTRQEMVDNRISRSLA--RLSPDNKWVLLANNTKKLYRHSFYADYYVKERSTNRVIKLHSPDGDSDEQI----RLCTWANNGSAIVFVYKCNVYYIATLETEDIKYYQLTTSGVPKSVFNGVPDWVYEEELLFSGKALEVSADGKYLSYVKFNANQ-SYFSYAIYGHPSKSYPDIDRIAYPKAGFPNPTIEIKIINLQSVLQEDNSVKNFTQYKKILSPPAKISKGDYYYCIMTWSPGNELYVQWMNRAQNETV--CMKYDSTNGQPTTLQEYN----TPGGWIDD-DYTKPKFAKDNSNYITLLPHED-FRHLAKVSMNPKNGPEVEFLTDGKFMVVDINCYNADDQILYYRSTQ--ESPAQRHVYRINLQT-KENSCITCDLLKDSDGTKCTYHDIVFSKKCTYATINCKGPYVPVSYM---VNMETMNVQNLTSNEHVKDLLSRKALPTEKFYTIKSDGWDIHVKETRPAGFDPKKKYPVLLSVYGGPSTQKVTDRYSYGFDHFLVSSHDIILINFDARGAGYYGYKFMYAVYKQLGHYEAVDAVNVGKYLKTQPYVDPKKIAIWGWSYGGFYSSTVMGMDSDVIXXXXXXXXXXDWRYYDTVYTERYMGLPTPEDNIAGYQSTSVLSMTKNFRGKNFLLIHGTADDNVHFQNAAQLSAALVRDKVKFRGQFYTDKRHSIQTS----HVYYLIADYL 2280
            + +TL +     Y  +  S+ W+SD  YL   +  +   + N+ Y +  +  +    +    S+    +SPD +++LL  N  K +RHS+ A Y + + +  ++I        ++E+I    +  TW+  G  + +V+  ++Y    +E  ++  Y++T +G    ++NG+ DWVYEEE+  +  AL  S +G +L+Y +FN  +     Y+ Y   S  YP   R+ YPKAG  NPT++  ++N  S+    +SV N T  +  ++ PA +  GD+Y C +TW+    + +QW+ R QN +V     YD ++G+   L        +  GW+     ++P F  D +++  ++ +E+ +RH+    ++ K   +  F+T G + V+ I    +D   LYY S +    P  R++Y+I L    + +C++C+L    +  +C Y+ + FSK+  Y  + C GP +P+  +   VN + + V  L  N  +  +L    +P++K   I  +      +   P  FD  KKYP+LL VY GP +QK    +   +  +L S+ +II+ +FD RG+GY G K M+A+ ++LG +E  D +   +      +VD K+IAIWGWSYGG+ +S V+G  S V    +AVAPV+ W YYD+VYTERYMGLPTPEDN+  Y++++V+S  +NF+   +LLIHGTADDNVHFQ +AQ+S ALV   V F+  +YTD+ H I +S    H+Y  ++ ++
Sbjct:   41 KTYTLTDYLKNTYRLKLYSLRWISDHEYLYKQENNIL--VFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI--------TEERIPNNTQWVTWSPVGHKLAYVWNNDIY--VKIE-PNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSL----SSVTNATSIQ--ITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKK---DCTFITKGTWEVIGIEALTSD--YLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCEL----NPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRV--LEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFI 759

The following BLAST results are available for this feature:

BLAST of TCONS_00060389 vs. Swiss-Prot (Human)

BLAST of TCONS_00060389 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DPP4	2.998e-120	32.98	Dipeptidyl peptidase 4 OS=Homo sapiens GN=DPP4 PE=...	[more]

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TCONS_00060389 (transcript) - C. hemisphaerica