TCONS_00060386 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00060386
Unique Name	TCONS_00060386
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3573

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_341:309162..325216+

transcript sequence

>TCONS_00060386 ID=TCONS_00060386|Name=TCONS_00060386|organism=Clytia hemisphaerica|type=transcript|length=3573bp
ATCATTGTTCTTGTCCTCTTGATTCTCATCTCAATCACCCTCGTCCTCGT
TTTCACACTAGCCCTCAAAAAAGACAaagaattGAGTTCGGAAACGTTGA
TCAGTCCAAACAGACGATTTACATTAGACGAAGTTTTTCTAAGGAAATAT
ACACCACGCACTGCAAGCATTTATTGGGTGTCAGATGACAATTACTTAGA
TTTTTCGGACGGCATTGTCCGAAAATCGATCACCAATTCAACTTACTCTG
ATCGGATTCTCACACGACAAGAAATGGTTGACAATAGAATCAGTCGTTCA
CTAGCCAGACTTTCGCCAGATAATAAATGGGTTTTACTAGCCAACAATAC
TAAAAAGCTATATCGACATTCCTTCTACGCTGACTATTATGTAAAAGAGA
GATCTACAAATAGagtaATCAAACTACATAGCCCGGACGGAGATTCGGAT
GAGCAGATACGACTTTGTACTTGGGCAAACAATGGAAGTGCTATTGTTTT
CGTCTACAAATGCAATGTGTATTACATTGCGACTTTGGAAACAGAAGACA
TCAAGTATTACCAGTTAACAACCAGTGGTGTTCCCAAATCTGTTTTCAAT
GGCGTTCCTGATTGGGTTTACGAAGaGGAGCTGTTGTTTTCTGGGAAAGC
TTTGGAGGTTTCAGCTGATGGCAAATATCTCTCTTACGTCAAATTCAACG
CGAACCAATCGTATTTTAGTTATGCCATTTATGGTCACCCAAGTAAAAGC
TACCCAGATATCGATCGAATCGCTTATCCGAAGGCTGGTTTTCCGAACCC
AACCAtcgaaatcaaaatcatcaatcTGCAGAGTGTCTTGCAAGAAGATA
atagtgtcaaaaatttcacCCAATATAAAAAGATCCTAAGTCCACctgct
aaaatctcaaaaggTGATTATTATTATTGCATTATGACTTGGAGTCCTGG
GAACGAGTTGTATGTCCAATGGATGAACCGTGCTCAAAACGAGACTGTTT
GTATGAAGTACGATTCGACAAACGGACAACCAACAACTCTTCAAGAATAC
AATACACCAGGTGGATGGATAGACGATGATTACACCAAACCAAAGTTTGC
CAAAGACAATTCCAATTATATCACGCTATTGCCACACGAAGATTTTCGAC
ATTTGGCTAAAGTCTCGATGAATCCCaagAATGGCCCTGAAGTGGAGTTT
TTGACGGATGGAAAATTCATGGTTGTGGATATCAACTGTTACAACGCGGA
TGATCAAATTTTatattaTCGAAGCACCCAAGAATCTCCTGCACAACGTC
ATGTCTATCGAATCAATTTACAAACCAAAGAAAACAGTTGTATCACTTGT
GACTTGTTGAAAGACAGTGATGGCACCAAATGTACATATCACGATATTGT
CTTCAGCAAGAAGTGTACGTATGCAACCATCAACTGCAAAGGACCTTACG
TACCCGTATCTTACATGGTCAATATGGAAACAATGAACGTACAAAACCTA
ACGTCTAATGAACATGTTAAAGACTTATTAAGTAGGAAAGCGTTACCGAC
AGAGAAATTTTATACTATAAAATCTGATGGGTGGGATATTCACGTTAAAG
AGACACGCCCTGCGGGATTTGACCCCAAGAAGAAATATCCGGTGTTGTTG
AGTGTTTATGGTGGTCCAAGCACGCAAAAgGTGACAGATCGGTACAGTTA
CGGATTCGATCACTTTTTGGTATCTTCGCATGATATTATTCTCATTAACT
TCGATGCTAGAGGAGCTGGTTACTATGGTTACAAGTTTATGTACGCAGTC
TACAAACAACTTGGTCATTATGAAGCCGTCGATGCCGTTAACGTTGGCAA
GTACTTAAAAACACAACCTTACGTTGACCCAAAGAAAATCGCTATTTGGG
GCTGGTCGTATGGAGGATTCTATTCATCAACTGTGATGGGAATGGACAGT
GACGTCATCACGACGGCCGTTGCTGTTGCTCCAGTGACTGATTGGCGTTA
CTATGATACTGTTTACACCGAAAGATATATGGGACTGCCTACACTTGAAG
ATAATATTGCTGGGTATCAGAGTACAAGTGTCTTGAGCATGACAAAGAAC
TTCAGAGGAAAGAACTTTCTACTGATACATGGTACAGCAGATGATAACGT
CCACTTTCAAAATGCAGCTCAACTATCTGCAGCTTTGGTCAGAGATAAAG
TCAAATTTCGAGGACAGTTTTACACGGACAAGAGACATTCAATACAAACG
AGCCATGTTTATTATTTGATTGCTGACTACCTTATGGCGCATCTGAGAAA
TGTTGAAATCCCCGCTGATTCAGTATTCGGACTAAAAAATTACCCACTCA
AATGAAGAAGAAGGCTAGTCAAACCTGAATTAAAGCATCTTTTGTCAAAT
TAAGAACTTAAAAGCAGATAAAGTTTAGTTCGAAGAAAGTCTCCGTGGTG
GACAATGGAAAGTGTTGGCGGGTAAGAGACCATGGTGAAGCCAGGACATC
TAAAGATAAAGAGCTCCCACGCATTTGCTTCGATGCTGGGAGGTTATCAT
ACTGAATGCAGAATCGATGAATGCGCTTCCAGGTTGGTTATTCACTTAAT
TAAGAAAGAGGACGAATATATTTGAAAATCCAATTTTGGTTAATGACTGC
AAATCTGCAAATTGACATTTTGTTGGGTTGGCAATAATTGAGGAAACCAA
CGAATGTTGTTTTTCGaaggttaaattttgattttcttataaaataatgt
AATCGAGATCAAGTgctaaaaatcattcaaaatctGCTTTGAAACGAAAA
AAAGAAAGTGATATTTCGTTTCAGCTTAACTCATGCGGAAATCCTACGTT
ATATACACATTTTTGCTTTTAGATAAAAATACTTCAAAACTGCATTGCAA
AATGTGAAACTTTaaggaaagtttatttttgagTTAAGTACTTCTGGTGT
TCTCAAACAAAGTATCTCTCCTGATTTCCCAAAGTGCAGTGATAGTGACA
AGTCATGTTCATAATCCTAAGGCTGAAAAGGATTTGAAACAAGCGAGGGG
TAAATTACTCAGAAAacatgattttttaaaaagaataaaagaatcGTACC
AAACCTTTGTGATTGATCTCCCCCCCCCTCGGTGACATAGAAATGTTTTG
GCACGTacgtagacgatgctatcgtccgtttagagggtcagtaaacgTGA
GAAAGTACAGAGTCAGGAcatcagggcggtttacggggaaaaagtggcgg
tagagttttggaacaatgTTAGACAATAATTTTTACACTGTAAACACCTC
TGCCACTGTTTACTCCACCCCAAACTAAACTCGTTCTCAAATTTATCCCG
CTTCCTGGATTATTCCCTTTTTCAGTGAtaatgtgtagacgataggatcg
tcagCACGTACTTTGTGACATTATCTtgtataattttgattttttaattt
tgtttaataattgtttattatttactatgtgtaaaagaaaattatattGT
GTAAATTGAATTTTAGATGCCCGAACAATACCCGCTAAATATAATGAAAG
AAATTATCGTCActaaatcgaaa

Run BLAST on NCBI

transcript from alignment at scaffold_341:309162..325216+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00060386 ID=TCONS_00060386|Name=TCONS_00060386|organism=Clytia hemisphaerica|type=transcript|length=16055bp|location=Sequence derived from alignment at scaffold_341:309162..325216+ (Clytia hemisphaerica)
ATCATTGTTCTTGTCCTCTTGATTCTCATCTCAATCACCCTCGTCCTCGT
TTTCACACTAGCCCTCAAAAAAGACAGTAAGTATTTTCTAGATCAGTCTT
GTCTGCAATTTATACTACTATCATTGTTCTTGTCCTCTTGATTCTCATCT
CAATCACCCTCGTCCTCGTTTTCACACTAGCCCTCAAAAAAGACAGTAAG
TATTTTCTAGATCAGTCTTGTCTGCAATTTATACTACTATCATTGTTCTT
GTCCTCTTGATTCTCATCTCAATCACCCTCGTCCTCGTTTTCACACTAGC
CCTCAAAAAAGACAGTAAGTATTTTCTAGATCAGTCTTGTCTGCAATTTA
TACTACTATCATTGTTCTTGTCCTCTTGATTCTCATCTCAATCACCCTCG
TCCTCGTTTTCACACTAGCCCTCAAAAAAGACAGTAAGTATTTTCTGGAT
CAGTCTGGTCTGCAATTTATACTACTATCATTGTTCTTGTCCTCTTGATT
CTCATCTCAATCACCCTCGTCCTCGTCTTCATACTAGCACTCAAAAAAGA
CATTAAGTATTTTACTGACCAGTATGGTCTGTAATTTATACTTCATGTAG
TTCCCGGACCAACATAATTGTTCTTGTCCTTTTGATCTTATTTAATCAAC
CTCATCCTTGTTGCTTCAAATTAGCTCTAAACAGaaagtaaatattttaa
tgagtagtctggtctgtaatttataGTTTATCTTATTCCAAGACCAACAT
CATTATTCtagtcatttttgtttttatctcaATCACCCTCGTCCTCGTTT
TAATACTAGCTCTCAAAAAAGACAGAAAATCTTTTACGGGCCAATctgtc
aaaacaaacaaaagagaTTCCAACAAATCAACCTCGTACCCAGAGTCCAT
TgaaccactttttgattttactcatGAACGTGTTCGTTCAACTGTGAGAG
CTATCATCGTAATCATAAAGTGAACAAAGGGAATGGGTTCGAGTTTGTCT
AATAAACAAAACTctaattctcaaattttcagaagaattGAGTTCGGAAA
CGTTGATCAGTCCAAACAGACGATTTACATTAGACGAAGTTTTTCTAAGG
AAATATACACCACGCACTGCAAGCATTTATTGGGTGTCAGGTAAGATAAT
AATCTAAGTCCTGGAAATTCTACCTATGATAATAATTATTAGGACAATCG
CTCCATGGACAATCttatattgtaattttttttcataagatgGAGAGGTG
ATAAcactaaaaagttaaaatatttattttctctgtctttggaaatattt
tatgaaagGAGCTGCTTCAGATAACAAAATTCCGGAGTAGTTTCCCGGGC
GAAGACAGTCAATCGGGATGACGATCCTTATTATCTGGGAAAATGATTTG
ACtcattttggctttttttaaatatcaacTGCAACAGCTAAACAATCTTA
ATTTCAAAATCCTTTCTTTCAGATGACAATTACTTAGATTTTTCGGACGG
CATTGTCCGAAAATCGATCACCAATTCAACTTACTCTGATCGGATTCTCA
CACGACAAGAAATGGTAAGTTAACTTCTTAAGGTCGGAATCCTGATAGAG
ATTGAGATTTGAAAACTAGTCGAAGTCTCTCGGTTTACGCTACCATCTTA
AATGAATTGATATGCACTCCTTGAAAGGAGCACAAAAAAAATGGCCTTgg
tttttaacatattttttctGTGGAGATTGTTGGAGCATTAAGTAGAAAAG
ATGAAGGGCCCGAGTCAAATTTCGAAAACCTACACTGAATTTAGGCTTTT
CGACATGTTTTCATAGCTATATTTCAATAAATCTTCAACAACATTTTCAC
TATTATTGTTAAATTGTTAAATTCAGTTGTGGACAGTAAATGTGAAAGCA
ATTAAAAGAACAATCTTCACATTGTTTCAAATCAtcttattttatgtttt
agGTTGACAATAGAATCAGTCGTTCACTAGCCAGACTTTCGCCAGATAAT
AAATGGGTTTTACTAGCCAACAATACTAAAAAGGTGAGTGAGGACTTCAA
TCCCATTATTTGGACTCGAGATATTTATACCCATCACGTGACTCAATGAG
CTACAGGCTACCCTGAAGGAATGACAGACACCCCGAAAAGAATTCGGTTT
TTCTTCTAGAacaaagaaatgaaatgaaactcGTTTTCGGAGCAAGTCAG
CATCATTTTTATGGCGTTTATGTAATGACTTATAATTGATTGCCTTCTTT
ACAGCTATATCGACATTCCTTCTACGCTGACTATTATGTAAAAGAGAGAT
CTACAAATAGgtaatattattttgttttcacaaaAACAAGTTATTAGTTA
AATACACGATTAATCAAAAGGTCATCCTTTCATTTAAGCATGGGCTTAAC
TCGGTTGTTcggttgaaactttttttttcttttttagagtaATCAAACTA
CATAGCCCGGACGGAGATTCGGATGAGCAGATACGACTTTGTACTTGGGC
AAACAATGGAAGTGCTATTGTAAGAATGTGTTATTTATTTTAATTCCAAT
CTCTCATCATTAAGCATTGTATTATAGTCTCTGTAGTATCTTTATTAACA
GTTACATTTGTCCCTTATTTATAAATGCACTCCAGCATTATAGCAAAGCT
TAAATCAAACTTATATGGTACTCGATGTTTTTTTTCCGACACGCTGAAGg
tcggaaaaacttttcatATCTGGATATTTTGCCTGGTCATGCAACAGAAT
TGTTATTTGGAAGTCTTAGCCCTTGTTTTGGGGATCGTTGAGTCCAACCG
CAATTTTCCGACCTTAACACGGGCAGTTGAATTACCCTCCCCCACCGTTT
GGCACACTCCTTCAGCTTCTGTTTGGATGGCTACTAATACACCATTGGAG
TATCAGATGTATTTGGAATTTGAATTCAACGAATGTAGTGAGCCCCATTG
CAAGCACAAGCTGCAGTGAAATACTGCGACgtaaaattttacaattttaa
aattcaaagtcGTTAGGTTAGATAGTTAAAGCGTCCCCTCCTGAACATAT
AAGCTTTGTCTTCGCAGGTTTTCGTCTACAAATGCAATGTGTATTACATT
GCGACTTTGGAAACAGAAGACATCAAGTATTACCAGTTAACAACCAGTGG
TGTTCCCAAATCTGTTTTCAATGGCGTTCCTGATTGGGTTTACGAAGGTA
AATAAAGGTTACcgtattattttttattaaaagattTAGTCGGCTTCAGA
AAGACGAAATTACGTTAGGTTTCTTTTATCAAGATCCCGAGTCTCCTTGC
ATGGGTAGATTTTAACTATTTTGTCTACAGCCTGtccagaaaaaaagttg
aacatatTGATGaagtaaaatctttaaaactcattttttcattctataat
aaattgctcaaaaaaataaattttgctcTGTTGGCACAATTTTGTAAGTC
CGTGACAGTGATATCGTTGAATACCGAAACGCGCATGTGTCGTTGGTATC
CTTTGGGATGGTGATTTTATTCATCCTACGCTACACGTGGTTTCTGGAGT
GATCGAGACCCGACGCTGTTCCCGAGTGGGCTTCCAGTGTGGCGTTATGG
AGCGCCAAACCAGTTAAGGCTGGGTCCATGTCAACATATTTATTTAAGTT
TTACCCCGAATATCGGCCTGGCTGACGTCAGAGAGGAGAGACAATGACTA
AAGTTAATTTCGATCAATATCTCATAAATCCAATATGTTAGACATGTCGA
GAAGTCGGGAACGAactattagcgagtttatgtatttgcgcttttgagga
cggtaaagtgactgaagtgatttggaataacccgtaATTCTGCCCCGCAA
AATCATGGACGATAatagtgctgatttaccgtcgtcctcagttggtcatg
atctagtcaaattagaaccttaccgtctccgtcgctgaaaaacacacata
cataaactcggtatcgACTCTGCCTGGCCGGTGCCATTTCCGAACGAACT
CTTTACTCTCTCCTCTTGGTAGCAGGATCTCTTTTCTCATTCCGATCAAC
ACGATACTTCCCGACGAGAGGACTTGCCTCGTCCAAGTGTTTTCTCTCCT
AATGAATTCCCTATCTAACGTGCTCAAAGTGAGCTTCCATCCAAAGGTTT
CCATTACAATAAATGTGAATATAAAAATTGTGTACCGTGCCCTCATGACA
GTGGGCTTGAAAGCTCAGTCGATAGAGTCGTGTTGGCGCATAGATTCTAT
TCCACTTTTTTCCGTACACAAAAGATTTAAAATACAGAGGAGAATTTTTC
TGCTCTTCTcacttttccattttttctcatttcagaGGAGCTGTTGTTTT
CTGGGAAAGCTTTGGAGGTTTCAGCTGATGGCAAATATCTCTCTTACGTC
AAATTCAACGCGAACCAATCGTATTTTAGTTATGCCATTTATGGTCACCC
AAGTAAAAGCTACCCAGATATCGATCGAATCGCTTATCCGAAGGTAATCA
GGTCAACATTAAtgcatttttggacctaccgggaggtcctttaatttgac
cgttgtccgttcgtctgttacaagcttttctcgggattggctcattagtt
ttttttaattttttgcacaatgatacaaaatagtaatgcttaaaaagtga
cggagcccgattttgaaaaagaaatttggggGAAACTTGGGCCaaaaaaa
ctacctaaaaatcaggttttttggactttgtgcaaaattgcttcattagt
ttttcctgacttttggcagaaagatgaagtgcaaggcaccctaacatgtg
gctgaagtaatttttctcggaaaattttttttcgtcgtcaaatacggatt
ttcgcaaatttgggccaaaaactacctaaaaataaggttttttggacttg
gtgcaaaattgcttcattagtttttcctgacttttggcagaaagatgaag
tgcaaggcaccctaacatgtggctgaagtaatttttctcggaaaattttt
tttcgtcgtcaaatacggattttcgcaaatttgggccaaaaactacctaa
aaataaggttttttggacttggtgcaaaattgcttcattagtttttcctg
acttttggcagaaagatgaagtgcaaggcaccctaacatgtggctgaagt
aatttttctcggaaaattttttttcgtcgtcaaatacggattttcgcaaa
tttgggccaaaaactacctaaaaataaggttttttggacttggtgcaaaa
ttgcttcattagtttttcctgacttttggcagaaagatgaagtgcaaggc
accctaacatgtggctgaagtaatttttctcggaaaattttttttcgtcg
tcaaatacggattttcgcaaatttgggccaaaaactacctaaaaataagg
ttttttggacttggtgcaaaattgcttcattagtttttcctgacttttgg
cagaaagatgaagtgcaaggcaccctaacatgtggctgaagtaatttttc
tcggaaaattttttttcgtcgtcaaatacggattttcgcaaatttgggcc
aaaaactacctaaaaataaggttttttggacttggtgcaaaattgcttca
ttagtttttcctgacttttggcagaaagatgaagtgcaaggcaccctaac
atgtggctgaagtaatttttctcggaaaatttttttttttgtcgtaaaat
acgaattttcttttttgggggaaattctgttttaccattttcctgttagc
agcttttctcgggatcggcttattatttttttttcattttttgcacaatg
atacaaaatagtaatgcctaaaaagtgacggagcccgattttgaaaaaga
aatttggggTAAACTTGGGCCaaaaaaactacctaaaaataaggtttttt
ggactttgtgcaaaattgcttcattagttttttctgatttttgtcagaaa
gatagagtgcaaggtaccttaaaatgtggctgaagtaatttttttcggaa
gattttttttcgtcataaaANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgacgaccaagttacacaa
tgataaaagaaaataaatcagacgtttttgcattgttctaaaacttattg
tgtttgctcaataccaatagtaaaatgtagaacgcctacttttatctgat
tttgatcaacaggtaggtccattcagcatgttgcttgtctTCCTAATTTT
AATGCATCGTatcaatggaaaaaatttcactctCTCAAGCTCTCTGGATA
TTGAATAGATCTTTCCCTTATGGAAGTTTTTATAGCCCTGTCTTTCAGTA
AGGATGAAACTACTCACATGGTACtgcttttgaaaacttttgctTTTCTC
GGCAAATGACCTTATTGTTGTAGCTTCTATGCAatctattgagtttaaag
ccctaAAGTGGCTGGAGAGAAATCTTTAACCtatctcaagcaagaaaaag
tgaaactttaAGATTTGAGCCGCATTTAGAATGACGAATTGAATCTagcc
ctttctttgtttttgcgCAACCGGGcctttagaccatgttcacacacTAC
TGTTCCATTTCGCTCAGggatgattttcgttacggatcgagggTATTcgt
attggtttcggaacggaGCAGTTTCGTTCCGAtgaaaaagtggagcgaaa
cctttttgatctgttttgctttgtgaCGTCTTCTTTCTTgatgtttcgaa
ttttgacgttcacacttgtttcggaactgtttcgtttcggaacggaaaga
aaccgtaacgtctgaacatggtcttaaagTCAATGATATAATCCTGTAGT
ATCTTTAACTTCCTTTTTTGACGATCGGCGTGGTGTTCAATGTTAGTTTT
ATTATTGTTCTTCCAGGCTGGTTTTCCGAACCCAACCAtcgaaatcaaaa
tcatcaatcTGCAGAGTGTCTTGCAAGAAGATAatagtgtcaaaaatttc
acCCAATATAAAAAGATCCTAAGTCCACctgctaaaatctcaaaagggTG
AGTCCGTGATTGAAGATTAACTCAAATTCAACACGAGAACATACCGATGT
TGCAGGGGAGGATAGTGTCCTTTcctttttatatcaattttcaaCAACAG
CCCTCCTCCTTGCATGATTTGAAACTGAAAGATTAAAATGTCTTCCCTCT
AAGCTATTAATAGAAGAAATGATATGGAAATATTACAGAGGATTAATTGA
GATGAGTGTTTCCTTTTCATTTCTACCAGTGATTATTATTATTGCATTAT
GACTTGGAGTCCTGGGAACGAGTTGTATGTCCAATGGATGAACCGTGCTC
AAAACGAGACTGTTTGTATGAAGTACGATTCGACAAACGGACAACCAACA
ACTGTAAGTTTATGAAAGTActtcccagctggtacacaacgttgactcaa
cgttcatctaacgttatatggacgttgtgaacgttgtGTGCTTACAGTTg
attctcgctaattcgaactcgaaaggGGAATATTGGTTTTTTCGAATTAA
GGAGAAATTCGAGTTaaagcatgattatttcatagaggtcgatagacctg
ggaaatatattactgtaaattaaGTTGAGAAATTAAATTAAGAGGGTTTC
GCCTTGACGGAAATtgggaataagttcgaattatagaaagattcgaataa
gagaagttcgaataagcgagtcCAGTGTATTAGCCAGGGcccaaaacatt
tcaaattcaacGTTGAGTGATTCTGATTTAAACGATAAGAGTTAAAAATG
GAATAAATCTTTTTCAGCTTCAAGAATACAATACACCAGGTGGATGGATA
GACGATGATGTAGGTGACATTACtaattcatcatttttcaatCTGCTGCT
TTTTTCCAGTACTAGAAATTGTTTTCTAACAATCTCGTTTTGCAACGGGG
GAAAGTGCTTCGTATGTTTTGTATGTTCAGGTTTCCAAGTTTCCAACTGT
TTTAAAGAATAAGAAAAACAATGAACATCCAGAAATGTTTATCTAAGGgt
cgtaattttcaaaaaagcaacaaaaatgttaaaaaactcTTTTGGAGAAC
GTCTCCGTAAGTAGCAGACTCTGCCTCTTGTCCGGCATCCTTCAAACCTA
ATAAATTCCGGGTATTTTGCATTCCTTATTGTAAACAAACTTAAAGAGGT
CAACGTGCATTCTTTCAGTACACCAAACCAAAGTTTGCCAAAGACAATTC
CAATTATATCACGCTATTGCCACACGAAGATTTTCGACATTTGGCTAAAG
TCTCGATGAATCCCaaggtatgaacttaatttttccTTCTATCAGGAGGC
TAATTAGCTAGAGGGATGCTAGCAACCTAACCGTTAGGATTTTTAGGGTT
TTAACCGTTTGATTTTTACCAGAACCTTTTTTGACGGCCGTTAGTCACAG
AGGATTGCTttacttaggcaaaaagagATACAGGGATAAACGAATGACCT
GGGGAACCGTTTCAAATCCGTCAGACTCGAGCATAGCTTttgaaaaacac
aaattaaaaaattagcCTCTTTTAGCCTACCTTTTTATGAAAAACCCATC
AGAAACACACCCCTTGAATCGACAAGGATAGTCCCTTAAGCCCCCCGTAA
AGGCCGTAAAATCCGAAAGGAGAAGTTTGTATTTCACTAGCCTATAATAA
TTGTTTCCGCGTTTCGTTTAGAATGGCCCTGAAGTGGAGTTTTTGACGGA
TGGAAAATTCATGGTTGTGGATATCAACTGTTACAACGCGGATGATCAAA
TTTTGTAAGTTGGACTCATTTCCAAACCACCTTCAATATATTACTTCAAG
AGAAGCATGAGAAAAATTGTAAATCATTTTCCGCTGTctcattttttttc
agatattaTCGAAGCACCCAAGAATCTCCTGCACAACGTCATGTCTATCG
AATCAATTTACAAACCAAAGAAAACAGTTGTATCACTTGTGACTTGTTGA
AAGGTAAGACATGCAACTTTACAGAACTCTTCTAACTGGTGGAACAACTT
TAACACGGAGGGCTTAAAATGCTTAATACATTCGCTTAAACTTCTAGACT
GATTCCCTGACCTCTAAGGATAAATTCCTAAATAGAAATTATAACCGTGA
AGTTTTTTCGTTAGAGAATGGATAAACTAATTTTTAGCTCAAATAGTTGG
ATAGAGTGTCGTCCAACAGCCTTCTTATTTCTGCcgagaaaatttgaaga
atacTGAAAGCAGAACAGAAAGCTCAACCCACTTTTCGTACTTTTGGTTA
ATTTTTTGAGCTTTGTGAGTTATGATAACGCGCTTAACATGTCTATGTGA
AAATTAGGTTGTTAGGTTATACAAGTTCATCTGTGCATTCATTGAGCAGa
gtcttttagtgagttaaagcATGGTGTTTGTTTTTCCTTTCTGGTAGTTT
ACATATCTCGTTTGCAGGCTTGATTACTTCCGCGATGAAGAATAAATGTT
TCACCATTTCTGGTCTGTATTACAAAGGGACGAGATTTCTGGATTTCTAA
TATATTTCTATTGCATTATTGTAGACAGTGATGGCACCAAATGTACATAT
CACGATATTGTCTTCAGCAAGAAGTGTACGTATGCAACCATCAACTGCAA
AGGACCTTACGTACCCGTATCTTACATGGTCAATATGGAAACAATGAACG
TACAAAACCTAACGTCTAATGAACATGTTAAAGACTTATTAAGTAGGAAA
GCGTTACCGACAGAGAAATTTTATACTATAAAATCTGATGGGTGGGATAT
TCACGTTAAAGAGACACGCCCTGCGGGATTTGACCCCAAGAAGAAATATC
CGGTGTTGTTGAGTGTTTATGGTGGTCCAAGCACGCAAAAggtaaaagaa
attttctttggaaGTTATTCCCTTTAGGTGTTGATTGGCTTAATAATTAT
ATGGAGAAGTAGAAAATCCCTTTGAAGCTATTTCCTTACAGGGATGCTAG
AAAGCCTGTAAAGTATACAGAAAAATACATTTTGGCTTTCGGAAAGAAAA
TTAACCTCACGGTCTGTAAAACAAATGGTTCTCTACCAGCCAGTCGGTCT
GATGACAATAGCttgaaaaatttagcaaaaaaaaatttagcctTTTCTTA
TTCAAAAAGTTCTCAATACACGTCTTGAAGGTTGTACTGTAAATGCAAGG
TGTTTCTGATGGACTGATTCTTTACAATCCTCGCAGGTGACAGATCGGTA
CAGTTACGGATTCGATCACTTTTTGGTATCTTCGCATGATATTATTCTCA
TTAACTTCGATGCTAGAGGAGCTGGTTACTATGGTTACAAGTATGTTCGT
TTAACATTAGCGAGGTTAATTTTGACtgtaaagtgcgataccgtaggcct
gtatataacttgccaaagcaaatcatacaagtgaaatcttatgtaaAGGC
CTACGATATCTCATTGAAAGGTCTAAATAAAAACTACTCAATTCTGAAAG
GAAATAACTGTTTCACGCTGAAATATTGTGGTAGCATGACATGCATGTCg
tttattttcattcagtttattcaaaacaatctcAGTACTACAGTTAAGCA
AATAAAGACTAAAGTCAGACTAGATCCCGATTCCATATTCCTCCTTCTAT
TGGTATAAGTCGTACCAGCGTactttacaaatttgaaatctATTTTCGAT
TTATAATTGGATGCTCTGACGTTTTTCCCGGACAATTCAACTTTACGCTC
CCTTTTCAGTAGAAGTTTTCCTGAGCTAAATTTAATGTGTAAAAGTTTAC
TTTCTGTTCCTTTCTTTAGGTTTATGTACGCAGTCTACAAACAACTTGGT
CATTATGAAGCCGTCGATGCCGTTAACGTTGGCAAGTAAGTCCACTTGTG
CTTGTATATCGTTGCTTGGGGCTCGAAAAAAGATCCCGATCATTTATCTA
TTGGAACTTTAGTAAAGCAGGGTTACTAAAACCCAAGTATTTGATCATTG
ACACGGGCAATTATTCATGAAGAAATAGATAAAAATCAGCTTCCATTCGA
TGTTAAGTTTGGAGATGTATACCCAGCATTCTATTTTTTGCGTGTCCCTG
AATTTTATACATGACAGTCCACAAATCTCAGAATTTTAGTTCTCACTTTT
GTAACAAAATAAAGGTTAAGGCCACTGGACTTTCATATTTCATTTATTCA
CTTTCCAGGTACTTAAAAACACAACCTTACGTTGACCCAAAGAAAATCGC
TATTTGGGGCTGGGTGAGTAAAAATGTGCTTGTTAATCCTACTGGCATCA
AACATTAAAGAACGGTCATCTCAGGTCCatcgaaaatatcaaaaaacgtT
CTTCTAACATCAGCAAACCCGAACTAACGTTGAAACACAATCTCGTTCCC
TGTGCCATCAGTAAGCaccaaaaagctgataatacactAGCGTCAaccag
taacgtaaataaagcctgggatgcacggggacgaggttggccGAAACACT
GTTATGAAACAAGTTTatagaaaagtgaaaaagttttcaatctTGATAAT
ATTTCTTTTGTTCATTTCAGTCGTATGGAGGATTCTATTCATCAACTGTG
ATGGGAATGGACAGTGACGTCATCACGACGGCCGTTGCTGTTGCTCCAGT
GACTGATTGGCGTTACTATGGTAATTCTTATTTCATTATTATGATAACGC
TACTGTAGCAACCAATTTTACGATGTTTTTTGGTCGAAAGAGTAAGATTT
CTTTAGATTACAGATTCTTTCGTTTGATGCGACTTTTGACCTTATTAAAA
ACTTTCTGCGTAGGCCTCCGATTTcctcaattcaaaatttcctctACTGA
CCTTACATACCTTAAATTTCCGGGAAATTGTATATTGATGACCTAACGAA
AACTTCCTATCCAGTGGTGATTTACCTCATCTTTCATAAGTACGAGCTTT
CAAAATATGctcacacttttttgaaaaataacctttTTTGGCCTTATATA
GTGATCATGACCTATTGACAAATGGCCGGTTTGAATAAATGTTTGACGCG
CATGATCCATTAACAATCAATCCCAGGATCTTATACTTTTGTTTCTACTT
TAGATACTGTTTACACTGAAAGATATATGGGACTGCCTACACCAGAAGAT
AATATTGCTGGGTATCAGGTTAGTAGAGTGGCTCAGTCCGGAAGAAGCCA
TATAATCCTATTAACTTTCGTCTATAAAACCGAACTGACCAAACTAAATC
TAAAGGTGATGTCTAAGTTTTCTTGAGTGGAGTTTAACTCTTGCATGATT
AGAATAACCGTCGTAATATTACGTATTTTCGAATCTATGATAACAGGAAC
ATTGATATCTTGATTTTTACTAGAGTACGAGTGTCTTGAGCATGACAAAG
AACTTCAGAGGGAAGAACTTTCTACTGATACATGGCACAGCAGATGGTGA
GAAACCATTTCATTGTATAGTGCTAATTAGTTTCATACTCGTTTACAGGC
CTCCCAGAGAAGTCACTGATTACGCAATCACACCAAAATAATCCAATGAC
GATCTtgtatcgttttttttttcatcaaaaatctCTTACATCAAATTTCT
TGTCCATTGAACTACTTTTAATTCAAAACTTTTATGCACttctaaatttt
ctttcgtAGATAACGTCCACTTTCAAAACGCAGCTCAACTATCTGCAGCT
TTGGTCAGAGATAAAGTCAAATTTCGAGGACAGGTGTGTTTCACTTTTGC
CAGCATCGACTGGTATTTTTAATGGTTATTTCAATTGTTAATTTGCGATC
TTTTCTCTTATGGAGTTAAATTTagaccaaaaaaattgaaatgaaaattt
taattctccTACATAGAGGTTACTAGCTTTATCATTTCCTTTTTGGTTTT
TGGTGAGTTGACTATTTTATAAGAAGCTTTTCAATGTTCATCATTTTCAG
TTTTACACGGACAAGAGACATTCAATACAAACGAGTNGCAACCAATTTTA
CGATGTTTTTTGGTATTTAGTGCTACCTTGGACTCTGATAGAGTTCAATC
CTCCCAGCTtagaaaaacataaaataagcaaatttctttttcgtatagtc
tatttgatttgatttttttttttaacaaagttaATCTTTGGACGATTTTT
TGTTAGTCGTTTACCGTCTAGTGGTAGCTTTATTACCAATCATTTGTTAC
TCAATTTTATCGTGAAAGATTAACGGACAGATTCTTTCGTTTGATGCGAC
TTTTGACCTTATTAAAAACTTTCTGCGTAGGCCTCCGATTTcctcaattc
aaaatttcctctACTGACCTTACATACCTTAAATTTCCGGGAAATTGTAT
ATTGATGACCTAACGAAAGCTTGCTAACCAGTGGTGATTTACCTCATCTT
TCATAAGTACGAGCTTTCAAAATATGctcacacttttttgaaaaataacc
tttTTTGGCCTTATATAGTGATCATGACCTATTGACAATAATAGCCGGTA
AATGGGCGTTTTTCTTCGAGTAAATGTTTGACGCACATGACCCATTTACA
ATCAATCCCAGGATCTTATACCTTCGTTTCTACTTTAGATACTGTTTACA
CCGAAAGATATATGGGACTGCCTACACTTGAAGATAATATTGCTGGGTAT
CAGGTTAGTAGAGTGGCTCAGTCCGGATGAAGCCATACAATCCTATTACC
TTTCGTCTATAAAACCGAACTGACCAAACTAAATCTAAAGGTGGTGTCTA
AGTTTTCTTGAGTGGAGTTTAACCCTCGCATGATTAGAATAACCGTCGTA
ATATTACGTATTTTCGAATCTATGATAACAGGAACATTGATATCTTGATC
TTTACTAGAGTACAAGTGTCTTGAGCATGACAAAGAACTTCAGAGGAAAG
AACTTTCTACTGATACATGGTACAGCAGATGGTGAGAAAGCGTTTCATTG
TATAGTATACTTAGTTTCATACTCGTTTACAGGCCTCCCAGAGAAGTCAC
TGATTACGCAATCACACCAAAATAATCCAATCACGATCCTGTACCgtttt
ttataaataagaaatgaattaaaattaaatcaaaaatcttgTACATCAAA
TTTCTTGTACATTGAACTACTTTTGTGAACATTGAACACGTCGCTCCCCT
CGTATACTACGAACTAGTGTAATAGCAACGAATCGATAGCGcagttggga
gagcaatcgcccggcaagcgagaggtcgtgggttcaatccccactcgatt
tgttacctttgagaaaactgggaagtacattagtgcatgatccgttgatt
cattactgAACTACTTTTAATTCAAAACTTTTATGTACTTCTAAATTTTC
CTTCGTAGATAACGTCCACTTTCAAAATGCAGCTCAACTATCTGCAGCTT
TGGTCAGAGATAAAGTCAAATTTCGAGGACAGGTGTGATTCACTTTTGCC
AGCATCGACTGGTATTTTTAATGGTTATTTTAATTGTTAATTTGCGATCT
TCTCTCTTATGGAGTTAAATTTAgaccaaaaaatttgaaatgaaaatttt
aattctccTACATAGAGGTTACTAACTTTATCATTTCCTTTTTGGTTTTC
GGTGAGTTGACTATTTTATAAGAAGCTTTTCAATCTTCATCATTTTCAGT
TTTACACGGACAAGAGACATTCAATACAAACGAGCCATGTTTATTATTTG
ATTGCTGACTACCTTATGGCGCATCTGAGAAATGTTGAAATCCCCGCTGA
TTCAGTATTCGGACTAAAAAATTACCCACTCAAATGAAGAAGAAGGCTAG
TCAAACCTGAATTAAAGCATCTTTTGTCAAATTAAGAACTTAAAAGCAGA
TAAAGTTTAGTTCGAAGAAAGTCTCCGTGGTGGACAATGGAAAGTGTTGG
CGGGTAAGAGACCATGGTGAAGCCAGGACATCTAAAGATAAAGAGCTCCC
ACGCATTTGCTTCGATGCTGGGAGGTTATCATACTGAATGCAGAATCGAT
GAATGCGCTTCCAGGTTGGTTATTCACTTAATTAAGAAAGAGGACGAATA
TATTTGAAAATCCAATTTTGGTTAATGACTGCAAATCTGCAAATTGACAT
TTTGTTGGGTTGGCAATAATTGAGGAAACCAACGAATGTTGTTTTTCGaa
ggttaaattttgattttcttataaaataatgtAATCGAGATCAAGTgcta
aaaatcattcaaaatctGCTTTGAAACGAAAAAAAGAAAGTGATATTTCG
TTTCAGCTTAACTCATGCGGAAATCCTACGTTATATACACATTTTTGCTT
TTAGATAAAAATACTTCAAAACTGCATTGCAAAATGTGAAACTTTaagga
aagtttatttttgagTTAAGTACTTCTGGTGTTCTCAAACAAAGTATCTC
TCCTGATTTCCCAAAGTGCAGTGATAGTGACAAGTCATGTTCATAATCCT
AAGGCTGAAAAGGATTTGAAACAAGCGAGGGGTAAATTACTCAGAAAaca
tgattttttaaaaagaataaaagaatcGTACCAAACCTTTGTGATTGATC
TCCCCCCCCCTCGGTGACATAGAAATGTTTTGGCACGTacgtagacgatg
ctatcgtccgtttagagggtcagtaaacgTGAGAAAGTACAGAGTCAGGA
catcagggcggtttacggggaaaaagtggcggtagagttttggaacaatg
TTAGACAATAATTTTTACACTGTAAACACCTCTGCCACTGTTTACTCCAC
CCCAAACTAAACTCGTTCTCAAATTTATCCCGCTTCCTGGATTATTCCCT
TTTTCAGTGAtaatgtgtagacgataggatcgtcagCACGTACTTTGTGA
CATTATCTtgtataattttgattttttaattttgtttaataattgtttat
tatttactatgtgtaaaagaaaattatattGTGTAAATTGAATTTTAGAT
GCCCGAACAATACCCGCTAAATATAATGAAAGAAATTATCGTCActaaat
cgaaa

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_037992	XLOC_037992	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_341	supercontig	scaffold_341:309162..325216 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.053182	0.0691121	0.00534737	0.0169131	0.0362377	0	0.756368	0.969892	0.0373416	0.0712427	0.106244	0.0923686	1.31012	0.0813094	0.467665	0.486272	0.199329	0.185222	0.404003	1.11325	0.88639	0.333526	0.228202	1.64271	0.0773118	0.485785	4.64421	4.10206	0.116603	0.55882

Blast

[Close]

BLAST of TCONS_00060386 vs. Swiss-Prot (Human)
Match: DPP4 (Dipeptidyl peptidase 4 OS=Homo sapiens GN=DPP4 PE=1 SV=2)

HSP 1 Score: 389.423 bits (999), Expect = 1.035e-118
Identity = 246/749 (32.84%), Postives = 412/749 (55.01%), Query Frame = 1

Query:  112 RRFTLDEVFLRKYTPRTASIYWVSDDNYLDFSDGIVRKSITNSTYSDRILTRQEMVDNRISRSLA--RLSPDNKWVLLANNTKKLYRHSFYADYYVKERSTNRVIKLHSPDGDSDEQI----RLCTWANNGSAIVFVYKCNVYYIATLETEDIKYYQLTTSGVPKSVFNGVPDWVYEEELLFSGKALEVSADGKYLSYVKFNANQ-SYFSYAIYGHPSKSYPDIDRIAYPKAGFPNPTIEIKIINLQSVLQEDNSVKNFTQYKKILSPPAKISKGDYYYCIMTWSPGNELYVQWMNRAQNETV--CMKYDSTNGQPTTLQEYN----TPGGWIDD-DYTKPKFAKDNSNYITLLPHED-FRHLAKVSMNPKNGPEVEFLTDGKFMVVDINCYNADDQILYYRSTQ--ESPAQRHVYRINLQT-KENSCITCDLLKDSDGTKCTYHDIVFSKKCTYATINCKGPYVPVSYM---VNMETMNVQNLTSNEHVKDLLSRKALPTEKFYTIKSDGWDIHVKETRPAGFDPKKKYPVLLSVYGGPSTQKVTDRYSYGFDHFLVSSHDIILINFDARGAGYYGYKFMYAVYKQLGHYEAVDAVNVGKYLKTQPYVDPKKIAIWGWSYGGFYSSTVMGMDSDVIXXXXXXXXXXDWRYYDTVYTERYMGLPTLEDNIAGYQSTSVLSMTKNFRGKNFLLIHGTADDNVHFQNAAQLSAALVRDKVKFRGQFYTDKRHSIQTS----HVYYLIADYL 2283
            + +TL +     Y  +  S+ W+SD  YL   +  +   + N+ Y +  +  +    +    S+    +SPD +++LL  N  K +RHS+ A Y + + +  ++I        ++E+I    +  TW+  G  + +V+  ++Y    +E  ++  Y++T +G    ++NG+ DWVYEEE+  +  AL  S +G +L+Y +FN  +     Y+ Y   S  YP   R+ YPKAG  NPT++  ++N  S+    +SV N T  +  ++ PA +  GD+Y C +TW+    + +QW+ R QN +V     YD ++G+   L        +  GW+     ++P F  D +++  ++ +E+ +RH+    ++ K   +  F+T G + V+ I    +D   LYY S +    P  R++Y+I L    + +C++C+L    +  +C Y+ + FSK+  Y  + C GP +P+  +   VN + + V  L  N  +  +L    +P++K   I  +      +   P  FD  KKYP+LL VY GP +QK    +   +  +L S+ +II+ +FD RG+GY G K M+A+ ++LG +E  D +   +      +VD K+IAIWGWSYGG+ +S V+G  S V    +AVAPV+ W YYD+VYTERYMGLPT EDN+  Y++++V+S  +NF+   +LLIHGTADDNVHFQ +AQ+S ALV   V F+  +YTD+ H I +S    H+Y  ++ ++
Sbjct:   41 KTYTLTDYLKNTYRLKLYSLRWISDHEYLYKQENNIL--VFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI--------TEERIPNNTQWVTWSPVGHKLAYVWNNDIY--VKIE-PNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSL----SSVTNATSIQ--ITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKK---DCTFITKGTWEVIGIEALTSD--YLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCEL----NPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRV--LEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFI 759

The following BLAST results are available for this feature:

BLAST of TCONS_00060386 vs. Swiss-Prot (Human)

BLAST of TCONS_00060386 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DPP4	1.035e-118	32.84	Dipeptidyl peptidase 4 OS=Homo sapiens GN=DPP4 PE=...	[more]

You are here

TCONS_00060386 (transcript) - C. hemisphaerica