Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060271 ID=TCONS_00060271|Name=TCONS_00060271|organism=Clytia hemisphaerica|type=transcript|length=3397bp
CACtttctttgaatatttttttgttttcgtcCGGTGTAATTTTTTTGGCT
CCTTGAACAGATGCCAAACCAAATACTAAATGGCTGTTCTTGTCTTTGAG
CTGATCgtagtttttttatcataaatgGATTCATTTACACAAGAACTTTT
GTagcaattttagaaaaacaaacgAATTGCTTCATTAAGAAATGAGATAC
AGTTACCTTGAAACTTATCTTTTCTTTATTTACAGctaaaataattaata
aaaaacaaagaaagaaaggaTATGGATACAATAGACAGTTGATTCACCTG
GATGGGCCAATCACAAACCTTTCACCATGGCAACCGGCGAAGAACATGAA
CTGATTATTTTCAAACATGGTAACCATACAACAGAGTTGACCGTCCTCCA
AGAGTTGGGTCGTGGTGCATTCGGACAAGTTTTGCTCACACTTGACCCTG
GCGGAAAACGTTTCGCAGTGAAAAAAGTCGAATGCAAAGATGCGAACACG
TATTACACGATCGCCCAAGAGTTGTCGGTGCTTACCGAACTTCAACACCC
GAATATCATTCGGATGTATTCGGTGGATTTCGAATTGAACATGTGTTATT
TTGTAATGGAATATTGTCCAAATGGAACACTTAATGACCGTTTAAAACAA
CCGGTAACCGAGATCTCCCAGTTTCTATGGATGTCGCAATTAACAAGAGC
TCTGTTTTATTTACACCAGAATAAAATTGTTCATCGAGATTTAAAACCAG
AGAACGTTCTCTTGAAAAGTGAAGATGAGTTGAAATTAGCGGATTTTGGA
ATCGCCAAAAAGTTTTACGGTTTATCGAGAGGGCGTTTTCCAGATCAAAT
GGCACCCAACGAGTATTTGTCAGATTACTTGGAAGGTGATACCCGAATGG
GAACATTCGCCGGAACACCGTACTGGGTATCACCGGAAGTTTTCAACCAC
AATTATGATGAAAAGGCGGATGTCTTTTCATTGGGCGGAATTTTTTACGC
CATTCTTTTTCGAAGTTCGTTTTATTATGACGGGAAggaattttttggtg
tttttgtaaAAGATCGGTATGGAAAGGAAAAAGGATTGGGTCTAGCCATG
TTTGAAGAGGAGGCTGAGATTGACCCATTTGACGCCAATCACTTTGCTAA
TGAAAATGTTGATGACgatttgaagaaaattgttCGAAAAATGTTAAGTT
ATGATACAAGTCAAAGGGCGAGCATGAAAGAATGTTCCCACGAAATCGAT
AAAGCTTTCAACAAATTCACTGGTCTGTCAAGTGAAAGTGCTGCTGCTTG
TATAGAAAGAGAAACTAAGGAGAAACCTTACCCCCGACAGCCGTCTTCAT
CGACACGAAAACGAACCAAAAATCCTTCAACCAGTAGCACTGCTATGGAG
GGTCATATCGAACATTTGGCTGAATTTAATGAGAAAGACCCTTTCATGAA
GGAAACGAAAGAAGACGAAGAAGATATGGAGAATGGAGGGTGTCTTGTGG
GTTGCCAACAACACACTGTCCAAGGATGTCGGTGGTACTTGGGTTGCATG
CTCGACTTATTTGGCTGTCAGAAGAAACGGGATGAAGGCGATCAAgatga
acaaatttttccagTCGATGAACATATGTATAAAGAGCATGTTAACGTCA
ATGAAACCTCTCGTAagcctttgcttcattgaacgAAAAGTCTTCAATGA
TCACATGAACATAACTAGACTTACTTTGGAGCACTACAATTGGATATGGT
AATAGAAGAGTCAAGTCACAACAAAAGTAGAAATCTTCAaccggtttttt
ttttttttgcacgaGCATACTTTATCATCCCTTTCTTACGGCGACCCTTA
ATCCACTACGCTACTGTCACTGTTAGAACTGGCCTTTACAGGTCCAAAAA
TAACGTCAAAAAAGGGCCGACCTGAAAAGAGCTGATAAGGTGTATATTGA
ACTTGTAAATTCTACAATTGTAAACGTTtaggatttttttggaaaatatt
aggGAAATTTGAATATTAGGGATAATTTTGGTATTGGTTAACCTTTAGTA
AAGGAACCTGTctgacagacattgtcagaagCTGTATCTAAGATGATGAT
TAGTTGGGTTCCCCCTGGACGATGTCTTTGAAAGCGTTTGCGGTGTTTTT
CCTTCGATTAGTACTTAATACCTCAGAGTTTAGGAATGGAAAGCAATACA
TAATataaatcggccttttgagccttaaaatgtttcttacatgtttctaa
actttttgacataatcagccttatgaaaggctggattggaaggttgttaa
aaaaaccgaattaaaaaatgttattttctcattctgagcctcagcatgtt
tcttagatgtttcttactttttaggcattctgagcctcatgtttcttaaa
agtgtgtttcttataaaaaaaaaaacgtgtacaacaTCCGTGAGTGATCT
ATGAACTGTAGCTCCTCCAATGTTGCATACCTCCTTAGATTCAAAACCTG
Tggtatcccagctggcacaaaaccttgtttcaacgtttatctaacgttca
caacgtccataaacgttagatgaacgttgaaacaacgttgtgtgccagct
gggattcaATATATTGGCAGTTGCACGACTCAATTTAAAACTAGGTTTAT
TTCTCACAGACCCTTCTCACATATCAACCACAGACCCACTGAGAACCCTT
ttaccaaaatatcgtcctcaGTGGGAAATTATACTACCAATAAAATATAT
TCCAATTTGTGTCTCcattgaatgaaaataaaccaatcctgaCTGTAATG
CTGTTTCTCATCCCTACTGAATATTTTGACATGAAAACAATCGAATTTAC
ATcccaagtcataaaaaatataggaatatcaatccacatcgagtttcagt
tcgttatttttacccccgctggcttaaaaaaccctaccgggtctgtgaga
atagGGTGTCTTTGTAGTAACAAAAAGTTAATGTTAATAGAAAATTTCGA
GATTCTCGTGAATTTTTATAAGGATAAACtatattaagaattttaaggct
ttacggattttcttaggaaatcgcacaaaaatactcacaaaatggtgaaa
ataagaacatcttaagaacatttttgggctTGATAATCATAAAGTTAAGA
ACGAAAATCTTATGGAAGAACATGTATTCGTATTGGGATATGTATGAATG
CTTTGAGCACATTTTAGGAGGTGTTTACGATACGAGATTTGTGTTAAAAA
TATCCATCAATTTATGGAATGAAACTTCACCTTGAATGGAAcatttattt
atatttcgtattttttgtaaatttgttttatcttttaaaTACTTTTTCAC
TACTGTACTTGCACAATTGGGAAATATTATCACAGTTAGAAAATGTA Run BLAST on NCBI protein sequence of TCONS_00060271-protein >TCONS_00060271-protein ID=TCONS_00060271-protein|Name=TCONS_00060271-protein|organism=Clytia hemisphaerica|type=polypeptide|length=451bp
MATGEEHELIIFKHGNHTTELTVLQELGRGAFGQVLLTLDPGGKRFAVKK
VECKDANTYYTIAQELSVLTELQHPNIIRMYSVDFELNMCYFVMEYCPNG
TLNDRLKQPVTEISQFLWMSQLTRALFYLHQNKIVHRDLKPENVLLKSED
ELKLADFGIAKKFYGLSRGRFPDQMAPNEYLSDYLEGDTRMGTFAGTPYW
VSPEVFNHNYDEKADVFSLGGIFYAILFRSSFYYDGKEFFGVFVKDRYGK
EKGLGLAMFEEEAEIDPFDANHFANENVDDDLKKIVRKMLSYDTSQRASM
KECSHEIDKAFNKFTGLSSESAAACIERETKEKPYPRQPSSSTRKRTKNP
STSSTAMEGHIEHLAEFNEKDPFMKETKEDEEDMENGGCLVGCQQHTVQG
CRWYLGCMLDLFGCQKKRDEGDQDEQIFPVDEHMYKEHVNVNETSRKPLL
H Run BLAST on NCBI transcript from alignment at scaffold_339:225041..228982- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060271 ID=TCONS_00060271|Name=TCONS_00060271|organism=Clytia hemisphaerica|type=transcript|length=3942bp|location=Sequence derived from alignment at scaffold_339:225041..228982- (Clytia hemisphaerica)
CACTTTCTTTGAATATTTTTTTGTTTTCGTCCGGTGTAATTTTTTTGGCT
CCTTGAACAGATGCCAAACCAAATACTAAATGGCTGTTCTTGTCTTTGAG
CTGATCGTAGTTTTTTTATCATAAATGGATTCATTTACACAAGAACTTTT
GTAGCAATTTTAGAAAAACAAACGAATTGCTTCATTAAGAAATGAGATAC
AGTTACCTTGAAACTTATCTTTTCTTTATTTACAGCTAAAATAATTAATA
AAAAACAAAGAAAGAAAGGATATGGATACAATAGACAGTTGATTCACCTG
GATGGGCCAATCACAAACCTTTCACCATGGCAACCGGCGAAGAACATGAA
CTGATTATTTTCAAACATGGTAACCATACAACAGAGTTGACCGTCCTCCA
AGAGTTGGGTCGTGGTGCATTCGGACAAGTTTTGCTCACACTTGACCCTG
GCGGAAAACGTTTCGCAGTGAAAAAAGTCGAATGCAAAGATGCGAACACG
TATTACACGATCGCCCAAGAGTTGTCGGTGCTTACCGAACTTCAACACCC
GAATATCATTCGGATGTATTCGGTGGATTTCGAATTGAACATGTGTTATT
TTGTAATGGAATATTGTCCAAATGGAACACTTAATGACCGTTTAAAACAA
CCGGTAACCGAGATCTCCCAGTTTCTATGGATGTCGCAATTAACAAGAGC
TCTGTTTTATTTACACCAGAATAAAATTGTTCATCGAGATTTAAAACCAG
AGAACGTTCTCTTGAAAAGTGAAGATGAGTTGAAATTAGCGGATTTTGGA
ATCGCCAAAAAGTTTTACGGTTTATCGAGAGGGCGTTTTCCAGATCAAAT
GGCACCCAACGAGTATTTGTCAGATTACTTGGAAGGTGATACCCGAATGG
GAACATTCGCCGGAACACCGTACTGGGTATCACCGGAAGTTTTCAACCAC
AATTATGATGAAAAGGCGGATGTCTTTTCATTGGGCGGAATTTTTTACGC
CATTCTTTTTCGAAGTTCGTTTTATTATGACGGGAAGGAATTTTTTGGTG
TTTTTGTAAAAGATCGGTATGGAAAGGAAAAAGGATTGGGTCTAGCCATG
TTTGAAGAGGAGGCTGAGATTGACCCATTTGACGCCAATCACTTTGCTAA
TGAAAATGTTGATGACGATTTGAAGAAAATTGTTCGAAAAATGTTAAGTT
ATGATACAAGTCAAAGGGCGAGCATGAAAGAATGTTCCCACGAAATCGAT
AAAGCTTTCAACAAATTCACTGGTCTGTCAAGTGAAAGTGCTGCTGCTTG
TATAGAAAGAGAAACTAAGGAGAAACCTTACCCCCGACAGCCGTCTTCAT
CGACACGAAAACGAACCAAAAATCCTTCAACCAGTAGCACTGCTATGGAG
GGTCATATCGAACATTTGGCTGAATTTAATGAGAAAGACCCTTTCATGAA
GGAAACGAAAGAAGACGAAGAAGATATGGAGAATGGAGGGTGTCTTGTGG
GTTGCCAACAACACACTGTCCAAGGATGTCGGTGGTACTTGGGTTGCATG
CTCGACTTATTTGGTAAGTATTTTATTGGTTTCCACACATAGGGCGTCTG
GTCACTTAGACTTCATTAGACCTTTTCATAGGAAAGACATTGATCAAGTC
ATAAAATTTCAATTCTGAAAAAGTGAATGTCAGTTTCCATAAACATTTGG
AAGTCTTGAATTAATTACGAAAATGTCTGAAAAATAAACTTCTCTACAGG
GGAGGGACTGCAGACGCAGGATACTAACCTATAGGCTATTAACCTTGGTT
TTCAGAAAAAGTTGTCTTATCACCAGCCATTTTTTAGTACCGGGTACAAA
CTTTTTCTGAGAACAAAAGGGACGGGGATTTTCAAACGTTGGAAGTTCGG
ACAATTTAAGTTCGGATGCAATTTAATGTTCATTAATGTTATTTGTTACT
AATTATCAAGAAAGAAACTTTGTTCTGATTAGAGTCTTATCTCTAGTTTA
GGTATAATCTTATTTCTTTTTTTATGATTTTTGTTGGCGCCAATAAGTTT
ATACCTAAACTATCTTATCTCTGTAATAATACCTATCCGAATCACTATTT
TTCTGCAGGCTGTCAGAAGAAACGGGATGAAGGCGATCAAGATGAACAAA
TTTTTCCAGTCGATGAACATATGTATAAAGAGCATGTTAACGTCAATGAA
ACCTCTCGTAAGCCTTTGCTTCATTGAACGAAAAGTCTTCAATGATCACA
TGAACATAACTAGACTTACTTTGGAGCACTACAATTGGATATGGTAATAG
AAGAGTCAAGTCACAACAAAAGTAGAAATCTTCAACCGGTTTTTTTTTTT
TTTGCACGAGCATACTTTATCATCCCTTTCTTACGGCGACCCTTAATCCA
CTACGCTACTGTCACTGTTAGAACTGGCCTTTACAGGTCCAAAAATAACG
TCAAAAAAGGGCCGACCTGAAAAGAGCTGATAAGGTGTATATTGAACTTG
TAAATTCTACAATTGTAAACGTTTAGGATTTTTTTGGAAAATATTAGGGA
AATTTGAATATTAGGGATAATTTTGGTATTGGTTAACCTTTAGTAAAGGA
ACCTGTCTGACAGACATTGTCAGAAGCTGTATCTAAGATGATGATTAGTT
GGGTTCCCCCTGGACGATGTCTTTGAAAGCGTTTGCGGTGTTTTTCCTTC
GATTAGTACTTAATACCTCAGAGTTTAGGAATGGAAAGCAATACATAATA
TAAATCGGCCTTTTGAGCCTTAAAATGTTTCTTACATGTTTCTAAACTTT
TTGACATAATCAGCCTTATGAAAGGCTGGATTGGAAGGTTGTTAAAAAAA
CCGAATTAAAAAATGTTATTTTCTCATTCTGAGCCTCAGCATGTTTCTTA
GATGTTTCTTACTTTTTAGGCATTCTGAGCCTCATGTTTCTTAAAAGTGT
GTTTCTTATAAAAAAAAAAACGTGTACAACATCCGTGAGTGATCTATGAA
CTGTAGCTCCTCCAATGTTGCATACCTCCTTAGATTCAAAACCTGTGGTA
TCCCAGCTGGCACAAAACCTTGTTTCAACGTTTATCTAACGTTCACAACG
TCCATAAACGTTAGATGAACGTTGAAACAACGTTGTGTGCCAGCTGGGAT
TCAATATATTGGCAGTTGCACGACTCAATTTAAAACTAGGTTTATTTCTC
ACAGACCCTTCTCACATATCAACCACAGACCCACTGAGAACCCTTTTACC
AAAATATCGTCCTCAGTGGGAAATTATACTACCAATAAAATATATTCCAA
TTTGTGTCTCCATTGAATGAAAATAAACCAATCCTGACTGTAATGCTGTT
TCTCATCCCTACTGAATATTTTGACATGAAAACAATCGAATTTACATCCC
AAGTCATAAAAAATATAGGAATATCAATCCACATCGAGTTTCAGTTCGTT
ATTTTTACCCCCGCTGGCTTAAAAAACCCTACCGGGTCTGTGAGAATAGG
GTGTCTTTGTAGTAACAAAAAGTTAATGTTAATAGAAAATTTCGAGATTC
TCGTGAATTTTTATAAGGATAAACTATATTAAGAATTTTAAGGCTTTACG
GATTTTCTTAGGAAATCGCACAAAAATACTCACAAAATGGTGAAAATAAG
AACATCTTAAGAACATTTTTGGGCTTGATAATCATAAAGTTAAGAACGAA
AATCTTATGGAAGAACATGTATTCGTATTGGGATATGTATGAATGCTTTG
AGCACATTTTAGGAGGTGTTTACGATACGAGATTTGTGTTAAAAATATCC
ATCAATTTATGGAATGAAACTTCACCTTGAATGGAACATTTATTTATATT
TCGTATTTTTTGTAAATTTGTTTTATCTTTTAAATACTTTTTCACTACTG
TACTTGCACAATTGGGAAATATTATCACAGTTAGAAAATGTA Coding sequence (CDS) from alignment at scaffold_339:225041..228982- >TCONS_00060271 ID=TCONS_00060271|Name=TCONS_00060271|organism=Clytia hemisphaerica|type=CDS|length=2712bp|location=Sequence derived from alignment at scaffold_339:225041..228982- (Clytia hemisphaerica)
GCTGTCAGAAGAAACGGGATGAAGGCGATCAAGATGAACAAATTTTTCCA
GTCGATGAACATATGTATAAAGAGCATGTTAACGTCAATGAAACCTCTCG
TAAGCCTTTGCTTCATTGAATGGCAACCGGCGAAGAACATGAACTGATTA
TTTTCAAACATGGTAACCATACAACAGAGTTGACCGTCCTCCAAGAGTTG
GGTCGTGGTGCATTCGGACAAGTTTTGCTCACACTTGACCCTGGCGGAAA
ACGTTTCGCAGTGAAAAAAGTCGAATGCAAAGATGCGAACACGTATTACA
CGATCGCCCAAGAGTTGTCGGTGCTTACCGAACTTCAACACCCGAATATC
ATTCGGATGTATTCGGTGGATTTCGAATTGAACATGTGTTATTTTGTAAT
GGAATATTGTCCAAATGGAACACTTAATGACCGTTTAAAACAACCGGTAA
CCGAGATCTCCCAGTTTCTATGGATGTCGCAATTAACAAGAGCTCTGTTT
TATTTACACCAGAATAAAATTGTTCATCGAGATTTAAAACCAGAGAACGT
TCTCTTGAAAAGTGAAGATGAGTTGAAATTAGCGGATTTTGGAATCGCCA
AAAAGTTTTACGGTTTATCGAGAGGGCGTTTTCCAGATCAAATGGCACCC
AACGAGTATTTGTCAGATTACTTGGAAGGTGATACCCGAATGGGAACATT
CGCCGGAACACCGTACTGGGTATCACCGGAAGTTTTCAACCACAATTATG
ATGAAAAGGCGGATGTCTTTTCATTGGGCGGAATTTTTTACGCCATTCTT
TTTCGAAGTTCGTTTTATTATGACGGGAAGGAATTTTTTGGTGTTTTTGT
AAAAGATCGGTATGGAAAGGAAAAAGGATTGGGTCTAGCCATGTTTGAAG
AGGAGGCTGAGATTGACCCATTTGACGCCAATCACTTTGCTAATGAAAAT
GTTGATGACGATTTGAAGAAAATTGTTCGAAAAATGTTAAGTTATGATAC
AAGTCAAAGGGCGAGCATGAAAGAATGTTCCCACGAAATCGATAAAGCTT
TCAACAAATTCACTGGTCTGTCAAGTGAAAGTGCTGCTGCTTGTATAGAA
AGAGAAACTAAGGAGAAACCTTACCCCCGACAGCCGTCTTCATCGACACG
AAAACGAACCAAAAATCCTTCAACCAGTAGCACTGCTATGGAGGGTCATA
TCGAACATTTGGCTGAATTTAATGAGAAAGACCCTTTCATGAAGGAAACG
AAAGAAGACGAAGAAGATATGGAGAATGGAGGGTGTCTTGTGGGTTGCCA
ACAACACACTGTCCAAGGATGTCGGTGGTACTTGGGTTGCATGCTCGACT
TATTTGGCTGTCAGAAGAAACGGGATGAAGGCGATCAAGATGAACAAATT
TTTCCAGTCGATGAACATATGTATAAAGAGCATGTTAACGTCAATGAAAC
CTCTCGTAAGCCTTTGCTTCATTGAATGGCAACCGGCGAAGAACATGAAC
TGATTATTTTCAAACATGGTAACCATACAACAGAGTTGACCGTCCTCCAA
GAGTTGGGTCGTGGTGCATTCGGACAAGTTTTGCTCACACTTGACCCTGG
CGGAAAACGTTTCGCAGTGAAAAAAGTCGAATGCAAAGATGCGAACACGT
ATTACACGATCGCCCAAGAGTTGTCGGTGCTTACCGAACTTCAACACCCG
AATATCATTCGGATGTATTCGGTGGATTTCGAATTGAACATGTGTTATTT
TGTAATGGAATATTGTCCAAATGGAACACTTAATGACCGTTTAAAACAAC
CGGTAACCGAGATCTCCCAGTTTCTATGGATGTCGCAATTAACAAGAGCT
CTGTTTTATTTACACCAGAATAAAATTGTTCATCGAGATTTAAAACCAGA
GAACGTTCTCTTGAAAAGTGAAGATGAGTTGAAATTAGCGGATTTTGGAA
TCGCCAAAAAGTTTTACGGTTTATCGAGAGGGCGTTTTCCAGATCAAATG
GCACCCAACGAGTATTTGTCAGATTACTTGGAAGGTGATACCCGAATGGG
AACATTCGCCGGAACACCGTACTGGGTATCACCGGAAGTTTTCAACCACA
ATTATGATGAAAAGGCGGATGTCTTTTCATTGGGCGGAATTTTTTACGCC
ATTCTTTTTCGAAGTTCGTTTTATTATGACGGGAAGGAATTTTTTGGTGT
TTTTGTAAAAGATCGGTATGGAAAGGAAAAAGGATTGGGTCTAGCCATGT
TTGAAGAGGAGGCTGAGATTGACCCATTTGACGCCAATCACTTTGCTAAT
GAAAATGTTGATGACGATTTGAAGAAAATTGTTCGAAAAATGTTAAGTTA
TGATACAAGTCAAAGGGCGAGCATGAAAGAATGTTCCCACGAAATCGATA
AAGCTTTCAACAAATTCACTGGTCTGTCAAGTGAAAGTGCTGCTGCTTGT
ATAGAAAGAGAAACTAAGGAGAAACCTTACCCCCGACAGCCGTCTTCATC
GACACGAAAACGAACCAAAAATCCTTCAACCAGTAGCACTGCTATGGAGG
GTCATATCGAACATTTGGCTGAATTTAATGAGAAAGACCCTTTCATGAAG
GAAACGAAAGAAGACGAAGAAGATATGGAGAATGGAGGGTGTCTTGTGGG
TTGCCAACAACACACTGTCCAAGGATGTCGGTGGTACTTGGGTTGCATGC
TCGACTTATTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060271-exon-scaffold_339-1575043694:227420..228982 | TCONS_00060271-exon-scaffold_339-1575043694:227420..228982 | Clytia hemisphaerica | exon |
| TCONS_00060271-exon-scaffold_339-1575043694:225041..226874 | TCONS_00060271-exon-scaffold_339-1575043694:225041..226874 | Clytia hemisphaerica | exon |
| TCONS_00060271-exon-scaffold_339-1510915933:227420..228982 | TCONS_00060271-exon-scaffold_339-1510915933:227420..228982 | Clytia hemisphaerica | exon |
| TCONS_00060271-exon-scaffold_339-1510915933:225041..226874 | TCONS_00060271-exon-scaffold_339-1510915933:225041..226874 | Clytia hemisphaerica | exon |
| TCONS_00060271-exon-scaffold_339-1491911889:227420..228982 | TCONS_00060271-exon-scaffold_339-1491911889:227420..228982 | Clytia hemisphaerica | exon |
| TCONS_00060271-exon-scaffold_339-1491911889:225041..226874 | TCONS_00060271-exon-scaffold_339-1491911889:225041..226874 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_339 | supercontig | scaffold_339:225041..228982 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004672 | protein kinase activity |
| GO:0005524 | ATP binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006468 | protein phosphorylation |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006468 |
protein phosphorylation |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0004672 |
protein kinase activity |
Blast
BLAST of TCONS_00060271 vs. Swiss-Prot (Human)
Match: STK35 (Serine/threonine-protein kinase 35 OS=Homo sapiens GN=STK35 PE=1 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 8.527e-28 Identity = 100/349 (28.65%), Postives = 162/349 (46.42%), Query Frame = 3 Query: 369 GNHTTELTVLQELGRGAFGQVLLTL-DPGGKRFAVKKVECKDANTYYTIAQELSVLTELQ--HPNIIRMYSVDFELN-----------------------------------MCY--FVMEYCPNGTLN----DRLKQPVTEISQFLWMSQLTRALFYLHQNKIVHRDLKPENVLLKSEDE---LKLADFGIAKKFYGLS-RGRFPDQMAPNEYLSDYLEGDTRMGTFAGTPYWVSPEVFNHNYDEKADVFSLGGIFYAILFRSSFY--YDGKEFFGVFVKDRYGKE-KGLGLAMFEEEAEIDPFDANHFANE---NVDDDLKKIVRKMLSYDTSQRASMKECSHEIDK 1253
G+ ++L E+GRG++G V + G R AVKK+ C E LT L+ H N+++ + N CY FVME+C G LN R P T S +M QLT A+ +LH+N IVHRDLKP+N+L+ LK+ADFG++K GL+ RG+ +Q N ++ Y + + G+ ++++PEV+ +Y KAD+F+LG I +A++ R +F KE G ++K G E +G A+ E +P H + ++ + +K++++ ML+ + R E +D+
Sbjct: 196 GSARPRYSLLAEIGRGSYGVVYEAVAGRSGARVAVKKIRCDAPENVELALAEFWALTSLKRRHQNVVQFEECVLQRNGLAQRMSHGNKSSQLYLRLVETSLKGERILGYAEEPCYLWFVMEFCEGGDLNQYVLSRRPDPATNKS---FMLQLTSAIAFLHKNHIVHRDLKPDNILITERSGTPILKVADFGLSKVCAGLAPRGKEGNQDNKNVNVNKYW-----LSSACGSDFYMAPEVWEGHYTAKADIFALGIIIWAMIERITFIDSETKKELLGTYIKQ--GTEIVPVGEALLE-----NPKMELHIPQKRRTSMSEGIKQLLKDMLAANPQDRPDAFELETRMDQ 529
The following BLAST results are available for this feature:
|
