TCONS_00060265 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060265
Unique NameTCONS_00060265
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1378

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060265 ID=TCONS_00060265|Name=TCONS_00060265|organism=Clytia hemisphaerica|type=transcript|length=1378bp
aGAACAATCTCCGACGAAAGACGAGAAATCATCACTCACCATCAACCCTT
CTTCAACAGATGAATTGCAACAAAGGTTGGAACAATGCAAGGCTGTCATC
ACTGGACAAGAGGCTATCATACAAgagCTGAAAGAAGGCTATTCGCAAGA
AGCTTTTGAAAGAGCATTGTTGACATTTGGTTTATCTGAAGAAAATTACG
AAGCATCTGAAAAACGTTTGAAGAAGCTGAGagaggaagaagaaaaattg
tGCGAAGAACGAAAAAATTTCACTGATTACGTTCTCAAAGTTTCTAAAGA
GCGAGAGGAATTCGAAAAGGAGCGTGTTGAATTTTATATGCATTGTATAT
CCACGCCCGTCCTTAACAAAGATAAGAAATTAAACCCAAGAAGTGGTAAG
TTTTATATGCATTGTATATCCACGCCCGTCCTTAACAAAGATAAGAAATT
AAACCCAAGAAGTGGAATCTCAACCAAGCATAGTCTTCGTATGGCAACGC
CCGCTTTCAGCCCCGCACCTTCAATTTTTGCATCATCTAAGAAGGAGAGA
TTACCAACTTCAAAACAAATGCCCTCCACCGCAGAACTGTACCGTTTCAT
GTCATTGAATTACGATGGATCTGTGTCAAGGAATCTTGATCGaAATTTGA
ACGGTTCATTCGTCCAAGCAGATACCTCACCTGATGGTTCACCCTCTCCC
AAAAAGTTACACGAGCACGCGGAAAATATTCGTCGCGCGGTCGAAGAGCA
TCACAATAAAAGTATTGAAGAGAGTGTCACTGAACTGCAAAAAACTCCTA
GATCGCACACAAGTTCCAACACTGGATTTAGTGGTGGCGAAATTCCGTTC
TATTTAATGGAGTAGGTACTGATGATCACGTATGGTTTATAGTCAAATAA
ATCTCAATGGGTTGTTGCTGAGCAACGGGAGAGCACTTTCATTTGTCATA
TATTTGATATGACCAAGAATGAATGCAGAGTCAAACATTGGATTGAAAAG
GGAATGGTTTCAATCAGTACATCGGGATTTCTGTCATTTGCTTCACTGGA
AAGAAATCAATTCTcatattaacttatttattcatTCGAGGAGGATACGA
AAAAGTCTTCTTCCAGAAGATTCGATTATACAACCATGCGCCTAAGGATG
CATGAAAGAGGAGTGGAACCGAGTTTATCAGGGTcgaatgacgtcaattt
ttagaATTCAATATGATGAAGAACTTGCAGgcaataaagatatttcatgC
CATTCGACTCTGGTCAAGTAGATGCTCTGGTTGTGATAGGGTTGGTGTCA
TACGTATCGAATTgccaaattcatgatatgcaccactgcaatgacttcac
gaaattatgcaactttctgttttttgtt
Run BLAST on NCBI

protein sequence of TCONS_00060265-protein

>TCONS_00060265-protein ID=TCONS_00060265-protein|Name=TCONS_00060265-protein|organism=Clytia hemisphaerica|type=polypeptide|length=287bp
EQSPTKDEKSSLTINPSSTDELQQRLEQCKAVITGQEAIIQELKEGYSQE
AFERALLTFGLSEENYEASEKRLKKLREEEEKLCEERKNFTDYVLKVSKE
REEFEKERVEFYMHCISTPVLNKDKKLNPRSGKFYMHCISTPVLNKDKKL
NPRSGISTKHSLRMATPAFSPAPSIFASSKKERLPTSKQMPSTAELYRFM
SLNYDGSVSRNLDRNLNGSFVQADTSPDGSPSPKKLHEHAENIRRAVEEH
HNKSIEESVTELQKTPRSHTSSNTGFSGGEIPFYLME
Run BLAST on NCBI

transcript from alignment at scaffold_339:174887..186359-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060265 ID=TCONS_00060265|Name=TCONS_00060265|organism=Clytia hemisphaerica|type=transcript|length=11473bp|location=Sequence derived from alignment at scaffold_339:174887..186359- (Clytia hemisphaerica)
AGAACAATCTCCGACGAAAGACGAGAAATCATCACTCACCATCAACCCTT
CTTCAACAGATGAATTGCAACAAAGGTTGGAACAATGCAAGGCTGTCATC
ACTGGACAAGAGGCTATCATACAAGTAGGTTCCAAACCTCTCCGTTCAAA
TTAGGTGTATTATAAATTCAATTCGATTTTCGGAGGGAAACATATTTTCA
TTGAATAAGGGTTCGAATAGTAGAGTGTATTGAATTGTAGAGAGTCGTTT
ATGATAGTTTCTTGTTGACGGCGACATCATTATTGAATCGAATATTAGAC
TTCGGTCGATTTAGAAAGGGTCAAATGTATTTGAAATTTGGAAAGTCGCC
GAATCCAATCCTCAGGTGCGAAGAGGGAAAAATGGCTCAACATTTGTTGC
TTTCTTTTTATTTTGTAGGAGCTGAAAGAAGGCTATTCGCAAGAAGCTTT
TGAAAGAGCATTGTTGGTAAGTCTCTTAACAGATCTCATTCACTTTCCAT
GCCCCTTTGAAACCGTAGTAAAATCAATTGTAAGTCTCTTAACAGATCTC
ATTCACTTTTCATGCCCCTTTGAAACTGTTGTAAAATCAATTGTAAGTCT
CTTAACAGATCTCATTCACTTTTCATGCCCCTTTGAAACCGTATTAAAAT
CAATTGTAAGTCTCTTAACAGATCTCATTCACTTTTCATGCCCCCTTTGA
AACCGTTGTAAAATCAATTGTAAGTCTCTTAACAGATCTCATTCACTTTT
CATGCCCCTTTGAAACCGTATTAAAATCAATTGTAAGTCTCTTAACAGAT
CTCATTCACTTTCCATGCCCCTTTGAAACCGTTGTAAAATCAATTGTAAG
TCTCTTAACAGATCTCATTCACTTTCCATGCCCCTTTGAAACCGTTGTAA
AATCAATTGTAAGTCTCTTAACAGATCTCATTCACTTTCCATGCCCCTTT
GAAACCGTTGTAAAATCAATTGTAAGTCTCTTAACAGATCTCATTCACTT
TCCATGCCCCTTTGAAACCGTTGTAAAATCAATTGTAAGTCTCTTAACAG
ATCTCATTCACTTTCCATGCCCCTTTGAAACCGTTGTAAAATCAATTGTA
AGTCTCTTAACAGATCTCATTCACTTTCCATGCCCCTTTGAAACCGTTGT
AAAATCAATTGTAAGTCTCTTAACAGATCTCATTCACTTTCCATGCCCCT
TTGAAACCGTTGTAAAATCAATTGTAAGTCTCTTAACAGATCTCATTCAC
TTTCCATGCCCCTTTGAAACCGTTGTAAAATCAATTGTAAGTCTCTTAAC
AGATCTCATTCACTTTCCATGCCCCTTTGAAACCGTTGTAAAATCAATTG
TAAGTCTCTTAACAGATCTCATTCACTTTCCATGCCCCTTTGAAACCGTT
GTAAAATCAATTGTAAGTCTCTTAACAGATCTCATTCACTTTCCATGCCC
CTTTGAAACCGTTGTAAAATCAATTGTAAGTCTCTTAACAGATCTCATTC
ACTTTCCATGCCCCTTTGAAACCGTTGTAAAATCAATTGTAAGTCTCTTA
ACAGATCTCATTCACTTTCCATGCCCCTTTGAAACCGTTGTAAAATCAAT
TGTAAGTCTCTTAACAGATCTCATTCACTTTCCATGCCCCTTTGAAACCG
TTGTAAAATCAATTGTAAGTCTCTTAACAGATCTCATTCACTTTCCATGC
CCCTTTGAAACCGTTGTAAAATTAATTGTAAGTCTCTTCACAGATCTCAT
TCACTTTTCATGCCCCTTTGAAACCGTAATAAAATCAATTGTAAGTCTCT
TAACAGATCTCATTCACTTTTCATGCCCCTTTGAAACCGTAGTAAAATTA
ATTGCAAGTCTCTTAACAGATCTCATTCACTTTTCATGCCCCATTGAAAC
CGTAGTAAAATCAATTGTAAGTCTCTTAACAGATCTCATTCACTTTTCAT
GCCCCATTGAAACCGTAATAAAATCAATTGTAAGTCTCTTAACAGATCTC
ATTCACTTTTCGTGCCCCATTGAAACCGTAGTAAAATTAATTGTAAGTCT
CTTAACAGATCTCATTCACTTTTCATGCCCCATTGAAACCGTAGTAAAAT
CAATTGTAAGTCTCTTAACGATCTCATTCACTTTTCATGCCCCATTGAAA
CCGTAGTAAAATCAATTGTAAGTCTCTTAACAGATCTCATTCACTTTTCA
TGCCCCTTTGAAACCGTAATAAAATCAATTGTAAGTCCCTTAACAGATCT
CATTTACTTTTCATGCCCCATTGAAACCGTAGTAAAATCAATTGTAAGTC
TCTTAACAGATCTCATTCACTTTTCATGCCCCTTTGAAACCGTAGTAAAA
TCAATTGTAAGTCTCTTAACAGATCTCATTCACTTTTCATGCCCCTTTGA
AATCGTAGTAAAATCAATTGTAAGTCTCTTAACAGATCTCATTCACTTTT
CATGCCCCTTTGAAACCGTAGTAAAATCAATTGTAAATCCCTTAAAAGAT
CTCATTCACTTTTCATGCCCCTTTGAAACCGTAGTAAAATCAATTGTAAG
TCTCTTAACAGATCTCATTCACTTTTCATGCCCCTTTGAAACATTAGTAA
AATCAATTGTAAGTCTCTTAACAGATCTCATTCACTTTTCATGCCCCTTT
GAAACCGTTGTAAAATCAATTGTAAGTCTCTTCACAGATCTCATTCACTT
TTTCATGCCCCTTTGAAACCGTAATAAAATCAATTGTAAGTCTCTTAACA
GATATCATTCACTTTTCCATGCCCCATTGAAACCGTAGTAAAATCAATTG
TAAGTCTCTTAACAGATCTCATTCACTTTTCATGCCCCTTTGAAACCGTA
GTAAAATCAATTGTAAGTCTCTTAACAGATCTCATTCACTTTTCATGCCC
CTTTGAAACCGTAGTAAAATCAATTGTAAGTCTCTTAACAGATCTCATTC
ACTTTTCATGCCCCTTTGAAACCGTAGTAAAATCAATTGTAAGTCTCTTA
ACAGATCTCATTCACTTTTCATGCCCCTTTGAAACCGTAGTAAAATCAAT
TGTAAGTCTCTTAACAGACCTCATTCACTTTTCATGCCCCATTGAAACCG
TAGTAAAATCAATTGTAAGTCTCTTAACAGATATCATTCACTTTTCCATG
CCCCTTTGAAACCGTAGTAAAATCAATTGTAAGTCTCTTAACAGATCTCA
TTCACTTTTCATGCCCCATTGAAACCGTAGTAAAATCAATTGTAAGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GATGTTTACTTCTACAGATTTGAGGAAAATTATACAAATCTTTTTATGAA
TCGTTGGAAAATGAGCACTTTCAAATGAATGTGACTAATAGCTTAAAAAT
ATTCTCCTAATCCATTATGCTCTTCTCTACTCTCTAAGAATATTCAATAA
AAAGTTCAATAATCGTTTTTGCTCGGGAAAGTTTGTCTGCCTTAAAAGCA
TTAGTTCGATTCGCAAACCTCTATAGATATATCTCCTGTATAGGTTTGCT
TAATAGTGTACGGCTTGCCTTCCCGCTATGGTGGCTCTTATGGTGGCCGA
TTTTACCTTTTTTGGCGAGTTCACTCGAATTATCGAGTTTGCATGGGGAA
CGGAAGTCGATGTGATGTGATATGAACTTTCACTTTTGAAAAACAAAATA
TGCAAAATGGCGGATGAGAGTGGCAGTAAAAATCGTGGGGCTCATTGTGA
AGATAAATGTTACCTGTGTCATAAAGTATCGAAGAACAAACATGACAAGA
ACATCCTCAGTGAAAAAAGAATCAATATCATTAATCAAAACAAATATTTT
CACCTGGCAGCAAGCTCCTTAAACAAGCTAAACCTGTGTCAACGATGCTG
CAGGGACATCGCACAGCTAGAGAAGAATTATAATTTTGAAAAGGGCCTAT
TAGAAAAGATTCCAGAACATCATAAAGTTAATGTAAGTTAACTGTTAGTT
CATTTTTCCAATGCAGAACTGTTTTGAGGTATTTAGTCCAGGCTATAAAA
TCATGATTTTTTCATCATTTAACTATCACACTATATTTGGTATATCCCAG
CAGGGTCAAGCGCTGTGTCCAGACGATCTCAATCGAACGGAATCGACGAT
CGAACCAGTGGAACCAAATCGAATGCAATCGACCGATTGAAATTCGATTG
TATCTCAATCGAATATTACCGCAATTTTCAGATTCGATTGATATTCAATT
GCGTTCGATTGATGTTCGATTGCGTTCGATCGTCGATTCATTGACCCCCG
GATTGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNCGAAAGTAATTTCATTCGGCTTGTGATGTTTGAGAGCTTGGATG
TTGGAAAGCTGCAAGAATAAAGCCAGACAATCTCAATCGAACGGAATTGA
CGATCGAAACAGTCGAACAACGATCGAACCAATCGAATATTACCCAGAAT
TTGTTCGATTGAGATTCGATTGCGTTCAACAATCCAATTTCAATTGGTCG
ATTGCGTTCAATTTGGTTTGACTGGTTCGATCGTCGATTCCGTTCGATTG
AGATCGTCTGGCTGTGTCAGGCTCGATTATAGGATCAATTATCAGAACAG
ATTGATAAAGAATCAGTATTTGATTGATGAATTACTTATAAAATTTCGAT
AAGTGATAAAGCAGGGATTTGATACCCAAGATTTTTTAGCCTATGATCAT
TTTATTGTTGTTCATTTATCCCTTGCTGGTCTATCCCCCATCAATTGATC
GATAAAAAAATTGATTTTTTGGAAAGATATTTTTGTTCTTGAAATTTTTA
ATCTGATATATAACACCGAATTGATAGCTGGTTCGAGACCGGCCTCTTTT
TTAAAAGAAGAGAAGCTACTGGAGCATCTAACTGGTGTTAATGTCAGTCA
CTGTCACTAACCTGAATAAAAAATGTTCATATCCATTTAGTAAAAATTGA
ATTAAAAACTTTATTTTTTAAATTTTAGCGTCAACCAGTCCCCTTGCTTG
AAGAAACTAAAACGTCAACAATTGGAACGCAAACCGAAACAAAAATAATT
TGCATCCCAGAAACAACAGAAAAAGAAACTAGATCTTTTGTATATATAAG
TTGGCCAAGCTGTACTAGATTTGCTGAAGTAAGGAGTTTACTATTTTGTA
ACATAGAAAGCATCTCTGATTTTTCTACTCGTTACAGTACAGAAATTTAT
CATAAAACGAAATTGTTAATGCTGGTTAATGTCCAGTTTTTAAAACTAAT
ATTCTAAGAGAGCAAAAATAGAAAAATAGATACCAGTTCTTATGACTCAT
GGCATATGTATAATGATATTTCTTTGTTTTTAGAACAACCTCTGAATCAT
CATAGAATATTATAATTACAATAGTATTCTACCATCTTTTTTAGCTACCC
AAATCCTTAAATCCAATCTGCTTAAGATTACTACGTCAGGACTATAAAAG
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
AGCAATGTATGAGAAAGTGCCGTCTGACGGATCGAAATGATGTTTTCGGT
ACCGTAGAAAACGCACATCAAGTTTTCCTTGGCGCTCCCCAGGTATATAG
AATCCAAAGGTACATGCACACGATAGCAAAACTGCTTCGCTCATGTATAT
TCGCTTCGCAAAAAGATTGCAAAGAAGTTTTCGAATAAATTCACTTAATA
GAATGTCTTCATTTAAAAATAGAAGCACTCGATTTCATTCAAAAAGAAAA
AGACATTCTTTTTTTTATGTAAGTCTTTTTTAAGTGTTGTTGAACATTAT
AGTAAATTATATTCACTTTTTTGAATATATTTTTTGGAATAAAGTCACTT
TTGGTTTTTGTTATGAACCAGCACTCCTAAATACTCCTCCGTATGGATGT
TTGTGCCAATGCTAGATCAGCATTTCATAAATATACCATGCGTCGTTCCC
TTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTCGAAAAAAAAAAATTTTCCGGCCGAAAATGCCGGAAATATGC
CAGAAAAACCGGTTTTTTGACATTTTCTCGAGATTTCATCATTATTTTTT
TCTGATTTTTTGCTTAAAGATGCGTATTAACAATGCCCAGAACATGGCCG
GGTCCGATTTTTGAGAAAAAATTTTTTCCGGCCGAAAATGTGGGAAATAT
GCCGGAAATCACCGTTTTTCTGAATTTTCATTAGACTTTTTCCTTATAAT
TGGTTGTTTTTTCATTCAAAAACATTATTAATAGCAAATGCCCACCATCA
AGCATGTTTCAATTTTCAATAAAATTGATTTTTGAAGCCGGAACTATTAA
AAAATCGCCGGAACAACCTATATTCGCTGGAAAGACAGTATTTCTTGAAT
TTCTCGAGCTGTACTTTATATTTTTTTATGAAATTTTGCACACTGATGCA
AAATGACAATACCTAAAATGTGACAGAGTCCAATTTTAGAAAAACATTTT
TTTCCGGCCGAAAATGCCGGAAATATGCCGGAAAAACCGGTTTTTTGACA
TTTTCTCGAATTTTCATCTTTAGTTTTTTCTGATTTTTTACAGAATTCGC
AATGCTCAAAACATGACAGAGCTCGATTTTTTGAGAACATTTTTTTTCCG
GCCAAAAATGCCGGAAATATGCCGGAAATCGCCGTTTTTGCAGATTTAAA
TTGGGCTTTTTCCTAACATTTCTTTGTTTTTTCTCCAAAAAAAACATCAT
TGATAGCAATTCCCACCATCAATCATGATTCGATTGTCAATAAAACTGAT
TTCTGCAACCGGAACTTTCTATATCTTTTTTCCCTTCTCCCTTTCCCTCT
CCCCATCAAGAATCAATGATGAAATTTAACGCATTTTGCCTTTTCGCTAA
AAATTATATTTTCTAACGGATTGTTTCCGTTTTTTTCCTTAATGCTATCT
AACTTTCATCATCAGGTAGGTTGAAAAACGAATCTTTATCTTATAAGAAT
CACTATATATAAGCATAGATCAATATTATTATTTTTCTAAAAGAAGAAAA
TGTCACGGTAGAGCGCGATGGTTTGAGTTTTCTAGAAACCTTTTTTATTA
AAGCTGTGCGTTTTTCTGATAGTGTATTGTTTTTATAAAGAAAAGCGTTT
AATAACCTTTTTAAGTCTTTTTCAATAGTGTTGATAGTTTCTCCCAATAG
ATATGCTTTCATTATATATGTGTTTCATTGTTTCAATGTTCATTGATTAG
TTTTGGTAACCAGGTAGGTCCATAAAAGTATCACTTGTTTTTTTGTTTTT
TTCTTCAAAAATGTATATTGGGTTTTTTGTTACAGATTGTCATGGTTAGT
CGCTAGTTTTTAGCTTCTCCAGTGTATATAACTTCACTTTACTTCTTTTA
TTTCTTACCTACAGACATTTGGTTTATCTGAAGAAAATTACGAAGCATCT
GAAAAACGTTTGAAGAAGCTGAGAGAGGAAGAAGAAAAATTGTGCGAAGA
ACGAAAAAATTTCACTGATTACGTTCTCAAAGTTTCTAAAGAGGTACGTG
GGTGGGTGGGTGTGGGTGGTTGTGGGTGTAGGCTCATATTTCTAAGTTCT
TTCAAGCTAGTAAATTTAGCGTGCATAAAATTTTCGTGAATGGATTTAAA
TGTCTGCGAAAAAGAGGTTAATTCGTGAAAATAATTGAAATTGAAAATTT
TTGATGCAGCAAAAAATCTATTCCCGCGAGATAAACTTTTTCTGACGAGT
TTTAAACTATATTCCATCAATAAAAAAGCGAAATTTCGGGAATCCACAGA
CCCACGAAATTAACAGGGCTCCCACAGCTCCTCTAATCTCCTCAATTCTC
CTTAAATTTCAAATGTCTCCTAAAATCTCCTACTTTTTCTCGAATTTCTC
CAATATTTTCTTCAAATCTCCTCAATTAAGTTTGACCAAAAATAAAAAAC
GTTCAACGTAGTATCGCTGGCCCTCTAGATGTTTCGAAAATTGATTATCA
AGAATAAAATGAAAAATTTTTTGCTCGCTTCGCTCTCACATTTCTTTACT
CTAATATCATGTTTCCATTTCCTCATTGCTCTTCAATAACTCGAAATTAG
TGACGTTCTGCTAAGGACAGGGGGCCACGACCCCACAACAGAGTTTTTTT
AAAAGGGCGAAATCAATTACGAAGTAAAAGTTTAGAAACTCTGGGGGTGG
GGGTGTTATTTAAAAAATAGACTATTGCCGCTATTGGTTCATGCTGTTAT
AACATGTCTACATTTAAAAATGTTTTCAGGTTTTTGTAGTTTTACACTTA
GAGCCACTGCTCCCCTCTAAGGATAATTACCTATCCCCCCCCCCCAGAAG
GAGACTTTGGTAAACCTTTCCTTTGTTTAATTCGTAAAAAGTTCATTTTT
ACAATAAAGGAGACAATCTCAAAAGATTTTTGTGCTTCTTTAAAGGTCAT
TTTCAGGAAGAGCCACGCCCCTATGGCATGTGTGGATCATGCCGATGTAA
AACATTATCCAATTTTTTTATTGGACAGTGCAGTGTTGCTTTTTTAACAA
CAAAAAGTATCATTTTAACTTGGAAAGAAAATCTCCTCAATTTTTCTAAA
AATATATGAAAAACTCCTCAAATTTTTACAGAAATCTCCTCAAAAAAGTG
GAAAATCCTCCTTAATTCTCCTCAATTCGCCTTAAATTTGAAATTTTGAA
AGCTGTGGGAACCCTGATTAATCAGGATTTGTAACAGTTAAATCCTATTA
GCCCCAACAAAAATCGAAAAAGCTTAAAAGGGGTTAAAGTATTCTGATTT
TATTTCTCAAAACCATGTTTGATCTTTTCTTTCCAGCGAGAGGAATTCGA
AAAGGAGCGTGTTGAATTTTATATGCATTGTATATCCACGCCCGTCCTTA
ACAAAGATAAGAAATTAAACCCAAGAAGTGGTAAGTTTTATATGCATTGT
ATATCCACGCCCGTCCTTAACAAAGATAAGAAATTAAACCCAAGAAGTGG
TGAGTTTAACCATCATTGGTTGTACATGACCGAAATCTTAAGGGGCGTAC
GGGGTTTGCTAATTCCGAAATACCGAATGATTTTGCTAAAATTTCCGAAA
TTCCGTAAAAAGATACTTGCAATTCCGATACCGACTTTTTTGGGTATATT
TCCTTGTTTTGACTAATTTTTCATCAAATTTGTTTTTCATGTATAAATTC
CGAAAAAGGGGGATAAAAACTTTATAATACCGAAATTCCGAAGCAAAAAT
TCCTGGATTTCCAATACCGAAGCAATTTCAGCATTCCGAAATACCGAAGG
AATTTTGCCCGATTTTCGAAATTCTGAAGAGAAAAGGCTCGATTTCCGCA
ATTCCAAAATACCGTACGCCCCCACCTTGAGGTTTTGCTCAAATCTCGAA
CTTGTCGCAAAATTCGACGTCCCTTGATAGAGGATGACTTATAAATTTAT
TGTTCTCGTTCTTGTTTTTAACTTTATTTTGATTTAATTCATATTCATTT
ATTACAGTAGCCCCTGGCGGAGACAATGGCTGAGCTGCTTAAAAAATGCC
ACTCAAAATATTAGTTATTGTTATTGTTGTTATAGGAATCTCAACCAAGC
ATAGTCTTCGTATGGCAACGCCCGCTTTCAGCCCCGCACCTTCAATTTTT
GCATCATCTAAGAAGGAGAGATTACCAACTTCAAAACAAATGCCCTCCAC
CGCAGAACTGTACCGTTTCATGTCATTGAATTACGATGGATCTGTGTCAA
GGAATCTTGATCGGTAATTACCTTATCGGCCAAAACTTAGTCGGTCCTAA
GTGGCGAAATTTTGGCTTGGTGACTAAAATTAGGGCCGGCTAAAAATTAG
GGCCGACTAAAAATTTGGGCCAAATTAAAAGTTTATAATTAAGCTTTCCT
CAACCAACTTTTTTGAGTACCACATCATGGTAATTTATTATTTCGTCCGC
TATTATTCATTATATATTAGTCGGCGCTAGTGACTAAATTTAGACGAGGT
GACTAAAATTAGGGCCGAACGAAAAATGTTATGTTGATACATCACGCTGA
AAAAAAAAGTGGTCACGTCTAGTATAGGCTAGCTTTTTGTTTTAGATATT
GATGTCGAAGCCAGAGCCCACGCCATGAAATTGAAAGTGGAGGCCAATGA
ACAAAGAGTCTATAAATAGGCGCAACCAAAAGATTCTACTTCTAAAAAAA
GTGGGCCCTGGAAACTCAATTGTCTTTTCTTCTTTCTAGAAATTTGAACG
GTTCATTCGTCCAAGCAGATACCTCACCTGATGGTTCACCCTCTCCCAAA
AAGTTACACGAGCACGCGGAAAATATTCGTCGCGCGGTCGAAGAGCATCA
CAATAAAAGTATTGAAGAGAGTGTCACTGAACTGCAAAAAACTCCTAGAT
CGCACACAAGTTCCAACACTGGATTTAGTGGTGGCGAAATTCCGTTCTAT
TTAATGGAGTAGGTACTGATGATCACGTATGGTTTATAGTCAAATAAATC
TCAATGGGTTGTTGCTGAGCAACGGGAGAGCACTTTCATTTGTCATATAT
TTGATATGACCAAGAATGAATGCAGAGTCAAACATTGGATTGAAAAGGGA
ATGGTTTCAATCAGTACATCGGGATTTCTGTCATTTGCTTCACTGGAAAG
AAATCAATTCTCATATTAACTTATTTATTCATTCGAGGAGGATACGAAAA
AGTCTTCTTCCAGAAGATTCGATTATACAACCATGCGCCTAAGGATGCAT
GAAAGAGGAGTGGAACCGAGTTTATCAGGGTCGAATGACGTCAATTTTTA
GAATTCAATATGATGAAGAACTTGCAGGCAGCATGAACATATAAACCAAA
GGATGCATAAAAGAGGATTGGGTCCGAGTTTATAAGGGTCGAATGACGTC
AATTTTTGTAATGAAGAACTTGCAGGCAATAAAGATATTTCATGCCATTC
GACTCTGGTCAAGTAGATGCTCTGGTTGTGATAGGGTTGGTGTCATACGT
ATCGAATTGCCAAATTCATGATATGCACCACTGCAATGACTTCACGAAAT
TATGCAACTTTCTGTTTTTTGTT

Coding sequence (CDS) from alignment at scaffold_339:174887..186359-

>TCONS_00060265 ID=TCONS_00060265|Name=TCONS_00060265|organism=Clytia hemisphaerica|type=CDS|length=5184bp|location=Sequence derived from alignment at scaffold_339:174887..186359- (Clytia hemisphaerica)
AAATTTGAACGGTTCATTCGTCCAAGCAGATACCTCACCTGATGGTTCAC
CCTCTCCCAAAAAGTTACACGAGCACGCGGAAAATATTCGTCGCGCGGTC
GAAGAGCATCACAATAAAAGTATTGAAGAGAGTGTCACTGAACTGCAAAA
AACTCCTAGATCGCACACAAGTTCCAACACTGGATTTAGTGGTGGCGAAA
TTCCGTTCTATTTAATGGAGTAGGAATCTCAACCAAGCATAGTCTTCGTA
TGGCAACGCCCGCTTTCAGCCCCGCACCTTCAATTTTTGCATCATCTAAG
AAGGAGAGATTACCAACTTCAAAACAAATGCCCTCCACCGCAGAACTGTA
CCGTTTCATGTCATTGAATTACGATGGATCTGTGTCAAGGAATCTTGATC
GCGAGAGGAATTCGAAAAGGAGCGTGTTGAATTTTATATGCATTGTATAT
CCACGCCCGTCCTTAACAAAGATAAGAAATTAAACCCAAGAAGTGGTAAG
TTTTATATGCATTGTATATCCACGCCCGTCCTTAACAAAGATAAGAAATT
AAACCCAAGAAGTGACATTTGGTTTATCTGAAGAAAATTACGAAGCATCT
GAAAAACGTTTGAAGAAGCTGAGAGAGGAAGAAGAAAAATTGTGCGAAGA
ACGAAAAAATTTCACTGATTACGTTCTCAAAGTTTCTAAAGAGGAGCTGA
AAGAAGGCTATTCGCAAGAAGCTTTTGAAAGAGCATTGTTGGAACAATCT
CCGACGAAAGACGAGAAATCATCACTCACCATCAACCCTTCTTCAACAGA
TGAATTGCAACAAAGGTTGGAACAATGCAAGGCTGTCATCACTGGACAAG
AGGCTATCATACAAAAATTTGAACGGTTCATTCGTCCAAGCAGATACCTC
ACCTGATGGTTCACCCTCTCCCAAAAAGTTACACGAGCACGCGGAAAATA
TTCGTCGCGCGGTCGAAGAGCATCACAATAAAAGTATTGAAGAGAGTGTC
ACTGAACTGCAAAAAACTCCTAGATCGCACACAAGTTCCAACACTGGATT
TAGTGGTGGCGAAATTCCGTTCTATTTAATGGAGTAGGAATCTCAACCAA
GCATAGTCTTCGTATGGCAACGCCCGCTTTCAGCCCCGCACCTTCAATTT
TTGCATCATCTAAGAAGGAGAGATTACCAACTTCAAAACAAATGCCCTCC
ACCGCAGAACTGTACCGTTTCATGTCATTGAATTACGATGGATCTGTGTC
AAGGAATCTTGATCGCGAGAGGAATTCGAAAAGGAGCGTGTTGAATTTTA
TATGCATTGTATATCCACGCCCGTCCTTAACAAAGATAAGAAATTAAACC
CAAGAAGTGGTAAGTTTTATATGCATTGTATATCCACGCCCGTCCTTAAC
AAAGATAAGAAATTAAACCCAAGAAGTGACATTTGGTTTATCTGAAGAAA
ATTACGAAGCATCTGAAAAACGTTTGAAGAAGCTGAGAGAGGAAGAAGAA
AAATTGTGCGAAGAACGAAAAAATTTCACTGATTACGTTCTCAAAGTTTC
TAAAGAGGAGCTGAAAGAAGGCTATTCGCAAGAAGCTTTTGAAAGAGCAT
TGTTGGAACAATCTCCGACGAAAGACGAGAAATCATCACTCACCATCAAC
CCTTCTTCAACAGATGAATTGCAACAAAGGTTGGAACAATGCAAGGCTGT
CATCACTGGACAAGAGGCTATCATACAAAAATTTGAACGGTTCATTCGTC
CAAGCAGATACCTCACCTGATGGTTCACCCTCTCCCAAAAAGTTACACGA
GCACGCGGAAAATATTCGTCGCGCGGTCGAAGAGCATCACAATAAAAGTA
TTGAAGAGAGTGTCACTGAACTGCAAAAAACTCCTAGATCGCACACAAGT
TCCAACACTGGATTTAGTGGTGGCGAAATTCCGTTCTATTTAATGGAGTA
GGAATCTCAACCAAGCATAGTCTTCGTATGGCAACGCCCGCTTTCAGCCC
CGCACCTTCAATTTTTGCATCATCTAAGAAGGAGAGATTACCAACTTCAA
AACAAATGCCCTCCACCGCAGAACTGTACCGTTTCATGTCATTGAATTAC
GATGGATCTGTGTCAAGGAATCTTGATCGCGAGAGGAATTCGAAAAGGAG
CGTGTTGAATTTTATATGCATTGTATATCCACGCCCGTCCTTAACAAAGA
TAAGAAATTAAACCCAAGAAGTGGTAAGTTTTATATGCATTGTATATCCA
CGCCCGTCCTTAACAAAGATAAGAAATTAAACCCAAGAAGTGACATTTGG
TTTATCTGAAGAAAATTACGAAGCATCTGAAAAACGTTTGAAGAAGCTGA
GAGAGGAAGAAGAAAAATTGTGCGAAGAACGAAAAAATTTCACTGATTAC
GTTCTCAAAGTTTCTAAAGAGGAGCTGAAAGAAGGCTATTCGCAAGAAGC
TTTTGAAAGAGCATTGTTGGAACAATCTCCGACGAAAGACGAGAAATCAT
CACTCACCATCAACCCTTCTTCAACAGATGAATTGCAACAAAGGTTGGAA
CAATGCAAGGCTGTCATCACTGGACAAGAGGCTATCATACAAAAATTTGA
ACGGTTCATTCGTCCAAGCAGATACCTCACCTGATGGTTCACCCTCTCCC
AAAAAGTTACACGAGCACGCGGAAAATATTCGTCGCGCGGTCGAAGAGCA
TCACAATAAAAGTATTGAAGAGAGTGTCACTGAACTGCAAAAAACTCCTA
GATCGCACACAAGTTCCAACACTGGATTTAGTGGTGGCGAAATTCCGTTC
TATTTAATGGAGTAGGAATCTCAACCAAGCATAGTCTTCGTATGGCAACG
CCCGCTTTCAGCCCCGCACCTTCAATTTTTGCATCATCTAAGAAGGAGAG
ATTACCAACTTCAAAACAAATGCCCTCCACCGCAGAACTGTACCGTTTCA
TGTCATTGAATTACGATGGATCTGTGTCAAGGAATCTTGATCGCGAGAGG
AATTCGAAAAGGAGCGTGTTGAATTTTATATGCATTGTATATCCACGCCC
GTCCTTAACAAAGATAAGAAATTAAACCCAAGAAGTGGTAAGTTTTATAT
GCATTGTATATCCACGCCCGTCCTTAACAAAGATAAGAAATTAAACCCAA
GAAGTGACATTTGGTTTATCTGAAGAAAATTACGAAGCATCTGAAAAACG
TTTGAAGAAGCTGAGAGAGGAAGAAGAAAAATTGTGCGAAGAACGAAAAA
ATTTCACTGATTACGTTCTCAAAGTTTCTAAAGAGGAGCTGAAAGAAGGC
TATTCGCAAGAAGCTTTTGAAAGAGCATTGTTGGAACAATCTCCGACGAA
AGACGAGAAATCATCACTCACCATCAACCCTTCTTCAACAGATGAATTGC
AACAAAGGTTGGAACAATGCAAGGCTGTCATCACTGGACAAGAGGCTATC
ATACAAAAATTTGAACGGTTCATTCGTCCAAGCAGATACCTCACCTGATG
GTTCACCCTCTCCCAAAAAGTTACACGAGCACGCGGAAAATATTCGTCGC
GCGGTCGAAGAGCATCACAATAAAAGTATTGAAGAGAGTGTCACTGAACT
GCAAAAAACTCCTAGATCGCACACAAGTTCCAACACTGGATTTAGTGGTG
GCGAAATTCCGTTCTATTTAATGGAGTAGGAATCTCAACCAAGCATAGTC
TTCGTATGGCAACGCCCGCTTTCAGCCCCGCACCTTCAATTTTTGCATCA
TCTAAGAAGGAGAGATTACCAACTTCAAAACAAATGCCCTCCACCGCAGA
ACTGTACCGTTTCATGTCATTGAATTACGATGGATCTGTGTCAAGGAATC
TTGATCGCGAGAGGAATTCGAAAAGGAGCGTGTTGAATTTTATATGCATT
GTATATCCACGCCCGTCCTTAACAAAGATAAGAAATTAAACCCAAGAAGT
GGTAAGTTTTATATGCATTGTATATCCACGCCCGTCCTTAACAAAGATAA
GAAATTAAACCCAAGAAGTGACATTTGGTTTATCTGAAGAAAATTACGAA
GCATCTGAAAAACGTTTGAAGAAGCTGAGAGAGGAAGAAGAAAAATTGTG
CGAAGAACGAAAAAATTTCACTGATTACGTTCTCAAAGTTTCTAAAGAGG
AGCTGAAAGAAGGCTATTCGCAAGAAGCTTTTGAAAGAGCATTGTTGGAA
CAATCTCCGACGAAAGACGAGAAATCATCACTCACCATCAACCCTTCTTC
AACAGATGAATTGCAACAAAGGTTGGAACAATGCAAGGCTGTCATCACTG
GACAAGAGGCTATCATACAAAAATTTGAACGGTTCATTCGTCCAAGCAGA
TACCTCACCTGATGGTTCACCCTCTCCCAAAAAGTTACACGAGCACGCGG
AAAATATTCGTCGCGCGGTCGAAGAGCATCACAATAAAAGTATTGAAGAG
AGTGTCACTGAACTGCAAAAAACTCCTAGATCGCACACAAGTTCCAACAC
TGGATTTAGTGGTGGCGAAATTCCGTTCTATTTAATGGAGTAGGAATCTC
AACCAAGCATAGTCTTCGTATGGCAACGCCCGCTTTCAGCCCCGCACCTT
CAATTTTTGCATCATCTAAGAAGGAGAGATTACCAACTTCAAAACAAATG
CCCTCCACCGCAGAACTGTACCGTTTCATGTCATTGAATTACGATGGATC
TGTGTCAAGGAATCTTGATCGCGAGAGGAATTCGAAAAGGAGCGTGTTGA
ATTTTATATGCATTGTATATCCACGCCCGTCCTTAACAAAGATAAGAAAT
TAAACCCAAGAAGTGGTAAGTTTTATATGCATTGTATATCCACGCCCGTC
CTTAACAAAGATAAGAAATTAAACCCAAGAAGTGACATTTGGTTTATCTG
AAGAAAATTACGAAGCATCTGAAAAACGTTTGAAGAAGCTGAGAGAGGAA
GAAGAAAAATTGTGCGAAGAACGAAAAAATTTCACTGATTACGTTCTCAA
AGTTTCTAAAGAGGAGCTGAAAGAAGGCTATTCGCAAGAAGCTTTTGAAA
GAGCATTGTTGGAACAATCTCCGACGAAAGACGAGAAATCATCACTCACC
ATCAACCCTTCTTCAACAGATGAATTGCAACAAAGGTTGGAACAATGCAA
GGCTGTCATCACTGGACAAGAGGCTATCATACAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037908XLOC_037908Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060265-proteinTCONS_00060265-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060265-exon-scaffold_339-1575043694:186236..186359TCONS_00060265-exon-scaffold_339-1575043694:186236..186359Clytia hemisphaericaexon
TCONS_00060265-exon-scaffold_339-1575043694:185894..185941TCONS_00060265-exon-scaffold_339-1575043694:185894..185941Clytia hemisphaericaexon
TCONS_00060265-exon-scaffold_339-1575043694:178417..178545TCONS_00060265-exon-scaffold_339-1575043694:178417..178545Clytia hemisphaericaexon
TCONS_00060265-exon-scaffold_339-1575043694:176961..177123TCONS_00060265-exon-scaffold_339-1575043694:176961..177123Clytia hemisphaericaexon
TCONS_00060265-exon-scaffold_339-1575043694:176197..176374TCONS_00060265-exon-scaffold_339-1575043694:176197..176374Clytia hemisphaericaexon
TCONS_00060265-exon-scaffold_339-1575043694:175133..175720TCONS_00060265-exon-scaffold_339-1575043694:175133..175720Clytia hemisphaericaexon
TCONS_00060265-exon-scaffold_339-1575043694:174887..175034TCONS_00060265-exon-scaffold_339-1575043694:174887..175034Clytia hemisphaericaexon
TCONS_00060265-exon-scaffold_339-1510915933:186236..186359TCONS_00060265-exon-scaffold_339-1510915933:186236..186359Clytia hemisphaericaexon
TCONS_00060265-exon-scaffold_339-1510915933:185894..185941TCONS_00060265-exon-scaffold_339-1510915933:185894..185941Clytia hemisphaericaexon
TCONS_00060265-exon-scaffold_339-1510915933:178417..178545TCONS_00060265-exon-scaffold_339-1510915933:178417..178545Clytia hemisphaericaexon
TCONS_00060265-exon-scaffold_339-1510915933:176961..177123TCONS_00060265-exon-scaffold_339-1510915933:176961..177123Clytia hemisphaericaexon
TCONS_00060265-exon-scaffold_339-1510915933:176197..176374TCONS_00060265-exon-scaffold_339-1510915933:176197..176374Clytia hemisphaericaexon
TCONS_00060265-exon-scaffold_339-1510915933:175133..175720TCONS_00060265-exon-scaffold_339-1510915933:175133..175720Clytia hemisphaericaexon
TCONS_00060265-exon-scaffold_339-1510915933:174887..175034TCONS_00060265-exon-scaffold_339-1510915933:174887..175034Clytia hemisphaericaexon
TCONS_00060265-exon-scaffold_339-1491911889:186236..186359TCONS_00060265-exon-scaffold_339-1491911889:186236..186359Clytia hemisphaericaexon
TCONS_00060265-exon-scaffold_339-1491911889:185894..185941TCONS_00060265-exon-scaffold_339-1491911889:185894..185941Clytia hemisphaericaexon
TCONS_00060265-exon-scaffold_339-1491911889:178417..178545TCONS_00060265-exon-scaffold_339-1491911889:178417..178545Clytia hemisphaericaexon
TCONS_00060265-exon-scaffold_339-1491911889:176961..177123TCONS_00060265-exon-scaffold_339-1491911889:176961..177123Clytia hemisphaericaexon
TCONS_00060265-exon-scaffold_339-1491911889:176197..176374TCONS_00060265-exon-scaffold_339-1491911889:176197..176374Clytia hemisphaericaexon
TCONS_00060265-exon-scaffold_339-1491911889:175133..175720TCONS_00060265-exon-scaffold_339-1491911889:175133..175720Clytia hemisphaericaexon
TCONS_00060265-exon-scaffold_339-1491911889:174887..175034TCONS_00060265-exon-scaffold_339-1491911889:174887..175034Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_339supercontigscaffold_339:174887..186359 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (0 tpm) - - (10.9305 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.50877	1.57711	4.62336	3.14596	5.00383	7.33743	2.51186	1.25216	2.02886	0.528584	1.12495	1.90849	3.51239	4.50742	4.78509	4.69994	7.10069	3.27132	3.25455	1.95919	0.953652	1.64174	1.61145	10.9305	7.85517	9.06097	5.08269	2.31633	0.589992
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060265 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
20040060080010001200Sequence
Match NameE-valueIdentityDescription
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