Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060255 ID=TCONS_00060255|Name=TCONS_00060255|organism=Clytia hemisphaerica|type=transcript|length=999bp
gttttgatgtttaaaaTCACTTGTTCGTTATAAAGTTAACAAGTTCCTGA
GGTGATTTGACTTTAACAGGATTATGTCACCTAAAAACTCACATCTTTCG
TAGTCACGcagtcaatcaaaaattaaatttaaaattatgacctATTGGTT
ATTAAGAAAGAAGATGTAAAAAACATAAATAGAGAAAAACTAACAAAACG
TCATCAAAGTGTAGCTTGCTTACTCTCACAACGTCAAACCTTTCCGTAAA
AATTCGCGAAGCTTCCTTCCTTGTAAAAGCTGATTTTGTTTTTGGAGAAA
TTTCAACATTGGTCAAAATGAGTGTCTGAAAACTTGTTAACGAGGTGAAA
ACTGCTTCTACTCTAGGGGAGCAGgtcttagaaaaaaaagaaactttaga
tGGACAACACTGCTCACACGTTGTCAATTTTGATTCATAGAGATTTGAGT
TGTGGAGCTCTTCTCAAAAGCTTGTTTTGTTGAAATAACCAATAAGATTG
ATTCACCTTTAACTATCCAAGCTCATAACAAGAATGAAGCATAAACAAGT
TACAGTAACCTTGCAAGGCAACAAAAATCAGCCTATGGTTCAGGCGTTCA
CAAAACCAATCACTCTACATTTGAACAAAGTCATCCAAATATTGATACAT
TGAACTCATCAAATAAAGGGCAACGTGGATAGACTTTCCACGCGGCAGTA
TTTCTCTTTCAGAATATAGAACAGAGTGCTTGTCTAATACATCATCAAAT
AACAGTGCATAACCAATCTATCTGTCAATCTCTACACCTTTTTCAACAtc
taaaaaacatttgaaaaatatcacaTCAAAGACTGAAGAGTGAACACCCA
GCAACGATCAAACGATATCTATCAACCTCGCATATTTACTTGAACGGTTG
TTCCCACCAGACAGAAACCGTTAAAAGTTCACGTATGAATAACAAATTGA
AGGTCATCTCATTTTTTATCCATTACAAAGGTATTAGATTTCCCTCGCC Run BLAST on NCBI transcript from alignment at scaffold_339:381178..382247+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060255 ID=TCONS_00060255|Name=TCONS_00060255|organism=Clytia hemisphaerica|type=transcript|length=1070bp|location=Sequence derived from alignment at scaffold_339:381178..382247+ (Clytia hemisphaerica)
gttttgatgtttaaaaTCACTTGTTCGTTATAAAGTTAACAAGTTCCTGA
GGTGATTTGACTTTAACAGGATTATGTCACCTAAAAACTCACATCTTTCG
TAGTCACGcagtcaatcaaaaattaaatttaaaattatgacctATTGGTT
ATTAAGAAAGAAGATGTAAAAAACATAAATAGAGAAAAACTAACAAAACG
TCATCAAAGTGTAGCTTGCTTACTCTCACAACGTCAAACCTTTCCGTAAA
AATTCGCGAAGCTTCCTTCCTTGTAAAAGCTGATTTTGTTTTTGGAGAAA
TTTCAACATTGGTCAAAATGAGTGTCTGAAAACTTGTTAACGAGGTGAAA
ACTGCTTCTACTCTAGGGGAGCAGgtcttagaaaaaaaagaaactttaga
tGGACAACACTGCTCACACGTTGTCAATTTTGATTCATAGAGATTTGAGT
TGTGGAGCTCTTCTCAAAAGCTTGTTTTGTTAAAATAACCAATAAGATTG
ATTCACCTTTAACTATCCAAGCTCATAACAAGTTACACTAACCTTGCNGG
TTGAAATAACCAATAAGATTGATTCACCTTTAACTATCCAAGCTCATAAC
AAGAATGAAGCATAAACAAGTTACAGTAACCTTGCAAGGCAACAAAAATC
AGCCTATGGTTCAGGCGTTCACAAAACCAATCACTCTACATTTGAACAAA
GTCATCCAAATATTGATACATTGAACTCATCAAATAAAGGGCAACGTGGA
TAGACTTTCCACGCGGCAGTATTTCTCTTTCAGAATATAGAACAGAGTGC
TTGTCTAATACATCATCAAATAACAGTGCATAACCAATCTATCTGTCAAT
CTCTACACCTTTTTCAACAtctaaaaaacatttgaaaaatatcacaTCAA
AGACTGAAGAGTGAACACCCAGCAACGATCAAACGATATCTATCAACCTC
GCATATTTACTTGAACGGTTGTTCCCACCAGACAGAAACCGTTAAAAGTT
CACGTATGAATAACAAATTGAAGGTCATCTCATTTTTTATCCATTACAAA
GGTATTAGATTTCCCTCGCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060255-exon-scaffold_339-1491911889:381178..381655 | TCONS_00060255-exon-scaffold_339-1491911889:381178..381655 | Clytia hemisphaerica | exon |
| TCONS_00060255-exon-scaffold_339-1510915933:381178..381655 | TCONS_00060255-exon-scaffold_339-1510915933:381178..381655 | Clytia hemisphaerica | exon |
| TCONS_00060255-exon-scaffold_339-1575043694:381178..381655 | TCONS_00060255-exon-scaffold_339-1575043694:381178..381655 | Clytia hemisphaerica | exon |
| TCONS_00060255-exon-scaffold_339-1491911889:381727..382247 | TCONS_00060255-exon-scaffold_339-1491911889:381727..382247 | Clytia hemisphaerica | exon |
| TCONS_00060255-exon-scaffold_339-1510915933:381727..382247 | TCONS_00060255-exon-scaffold_339-1510915933:381727..382247 | Clytia hemisphaerica | exon |
| TCONS_00060255-exon-scaffold_339-1575043694:381727..382247 | TCONS_00060255-exon-scaffold_339-1575043694:381727..382247 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_339 | supercontig | scaffold_339:381178..382247 + |
Blast
The following BLAST results are available for this feature:
|
