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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060214 ID=TCONS_00060214|Name=TCONS_00060214|organism=Clytia hemisphaerica|type=transcript|length=762bp
aatattgtcaaaaaaattgtaTTGGTTTGACTTCAATCTCGCAACAGTGT
TGCAATTGATGTccgcaaaaacaaaatcaacgtTGCAGTCCTTAGTGATA
AACTCTTTAGCTTCATCCAATAATTTCAACCGCTTTTTTGTTAAATCCAA
gtaaattttgatgttattttttgctttttttctggCCTTGTAGATCGATG
TACGTTTATCAAAAGAATAAAGTTTGACTATCATAGTACTGCGTTCTTTG
CCTACACGGTGAGCTCTGTCAATGTCTTTGGGTTCAATAGCAACATCCAT
GTCCTTAAAAACTTCGATTACCTTTTTAACACAATCAGCACTAGATTCGT
TTTCCCTTTTCTCGATTCCATTGATCCGCAAACAACTCCTACGTGAATAC
TGCTCTTGATCGTCactttttttagtcaaaaagtCTACTGTGCTACTCAA
AACAGCATTTTTGTCCTGAAGGATAAGCAAATTTTGTTCAAGGAATGAAA
TTCTCTCCTCGTGATCCACAGAGTCTTTTTCAAGTGAGGCAATCTTCTTA
TCCTGGTACAAAATGTTCTCATTAATCTTGTTAAAGATGCCTTTGATCTC
AGCAACATCATCCTTCGAGGCCAAGTTTTCAAGTCTGTTGTCTAATATTT
CTTCTATCATCTTAGCAAGTTCAGTTGAGCTTCTTGTCTTTTGACTCATA
ATAACAATTAAACCAGAAGAAGAAATCAATAAACCAAGccaaaaaacaac
agaaaatcaaaa Run BLAST on NCBI protein sequence of TCONS_00060214-protein >TCONS_00060214-protein ID=TCONS_00060214-protein|Name=TCONS_00060214-protein|organism=Clytia hemisphaerica|type=polypeptide|length=233bp
MSQKTRSSTELAKMIEEILDNRLENLASKDDVAEIKGIFNKINENILYQD
KKIASLEKDSVDHEERISFLEQNLLILQDKNAVLSSTVDFLTKKSDDQEQ
YSRRSCLRINGIEKRENESSADCVKKVIEVFKDMDVAIEPKDIDRAHRVG
KERSTMIVKLYSFDKRTSIYKARKKAKNNIKIYLDLTKKRLKLLDEAKEF
ITKDCNVDFVFADINCNTVARLKSNQYNFFDNI Run BLAST on NCBI transcript from alignment at scaffold_337:30510..31271 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060214 ID=TCONS_00060214|Name=TCONS_00060214|organism=Clytia hemisphaerica|type=transcript|length=762bp|location=Sequence derived from alignment at scaffold_337:30510..31271 (Clytia hemisphaerica)
ttttgattttctgttgttttttggCTTGGTTTATTGATTTCTTCTTCTGG
TTTAATTGTTATTATGAGTCAAAAGACAAGAAGCTCAACTGAACTTGCTA
AGATGATAGAAGAAATATTAGACAACAGACTTGAAAACTTGGCCTCGAAG
GATGATGTTGCTGAGATCAAAGGCATCTTTAACAAGATTAATGAGAACAT
TTTGTACCAGGATAAGAAGATTGCCTCACTTGAAAAAGACTCTGTGGATC
ACGAGGAGAGAATTTCATTCCTTGAACAAAATTTGCTTATCCTTCAGGAC
AAAAATGCTGTTTTGAGTAGCACAGTAGactttttgactaaaaaaagtGA
CGATCAAGAGCAGTATTCACGTAGGAGTTGTTTGCGGATCAATGGAATCG
AGAAAAGGGAAAACGAATCTAGTGCTGATTGTGTTAAAAAGGTAATCGAA
GTTTTTAAGGACATGGATGTTGCTATTGAACCCAAAGACATTGACAGAGC
TCACCGTGTAGGCAAAGAACGCAGTACTATGATAGTCAAACTTTATTCTT
TTGATAAACGTACATCGATCTACAAGGccagaaaaaaagcaaaaaataac
atcaaaatttacTTGGATTTAACAAAAAAGCGGTTGAAATTATTGGATGA
AGCTAAAGAGTTTATCACTAAGGACTGCAacgttgattttgtttttgcgg
ACATCAATTGCAACACTGTTGCGAGATTGAAGTCAAACCAAtacaatttt
tttgacaatatt Coding sequence (CDS) from alignment at scaffold_337:30510..31271 >TCONS_00060214 ID=TCONS_00060214|Name=TCONS_00060214|organism=Clytia hemisphaerica|type=CDS|length=699bp|location=Sequence derived from alignment at scaffold_337:30510..31271 (Clytia hemisphaerica)
ATGAGTCAAAAGACAAGAAGCTCAACTGAACTTGCTAAGATGATAGAAGA
AATATTAGACAACAGACTTGAAAACTTGGCCTCGAAGGATGATGTTGCTG
AGATCAAAGGCATCTTTAACAAGATTAATGAGAACATTTTGTACCAGGAT
AAGAAGATTGCCTCACTTGAAAAAGACTCTGTGGATCACGAGGAGAGAAT
TTCATTCCTTGAACAAAATTTGCTTATCCTTCAGGACAAAAATGCTGTTT
TGAGTAGCACAGTAGactttttgactaaaaaaagtGACGATCAAGAGCAG
TATTCACGTAGGAGTTGTTTGCGGATCAATGGAATCGAGAAAAGGGAAAA
CGAATCTAGTGCTGATTGTGTTAAAAAGGTAATCGAAGTTTTTAAGGACA
TGGATGTTGCTATTGAACCCAAAGACATTGACAGAGCTCACCGTGTAGGC
AAAGAACGCAGTACTATGATAGTCAAACTTTATTCTTTTGATAAACGTAC
ATCGATCTACAAGGccagaaaaaaagcaaaaaataacatcaaaatttacT
TGGATTTAACAAAAAAGCGGTTGAAATTATTGGATGAAGCTAAAGAGTTT
ATCACTAAGGACTGCAacgttgattttgtttttgcggACATCAATTGCAA
CACTGTTGCGAGATTGAAGTCAAACCAAtacaatttttttgacaatatt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060214-exon-scaffold_337-1491911889:30510..31271 | TCONS_00060214-exon-scaffold_337-1491911889:30510..31271 | Clytia hemisphaerica | exon |
| TCONS_00060214-exon-scaffold_337-1510915933:30510..31271 | TCONS_00060214-exon-scaffold_337-1510915933:30510..31271 | Clytia hemisphaerica | exon |
| TCONS_00060214-exon-scaffold_337-1575043694:30510..31271 | TCONS_00060214-exon-scaffold_337-1575043694:30510..31271 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_337 | supercontig | scaffold_337:30510..31271 . |
Blast
The following BLAST results are available for this feature:
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