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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060198 ID=TCONS_00060198|Name=TCONS_00060198|organism=Clytia hemisphaerica|type=transcript|length=1249bp
Naagtgtatgccccttggtcaggctcgtgtatgcttaagttctcaatgca
tccaggcatagtttatgcttattatatgcttaagaatcatgcttatgatt
caccccgagccaagtttttatctcaatttcagaaattttgtaaaaatttg
ttcagactttgggagcagtggaatgttagCGAGACGTGGAAggtcttatt
tttttacttgacatctaccaaacctttttaaacagataaaaatgaccact
tcaaaaatattttaggctgacatatatgctcatgttatgcttaggagttt
tgcaaatctgagccttcgtatacttataagcgttatgcttataaaaaaac
atgtatcccTCTGTTTTCGTCCCTTCTCATTCCTTCCCTTTCGTCTCTTC
TCTTCCCTCacttttcgttccttctcaccCCTCCTTTTTCATTGCTTCTC
ATCCCTCTGTTTTCGTCCCTTATCATTCCTCTGTTTTCGCTCCTTCTCAT
ACTTCTcctttcgttccttctcatccctccatcttcgtcccttctcatcc
ctctgttttcgtcccttctcatcTCTCCCTTTTCGTCCCTTCTCTTCCCT
CCCTTTTCGTTCCTTCTCACCCCTCTGTTTTCGCTCCTTCTCATACTTCT
CCTTTCGTTCCTTCTCGACCCTCAATTTTCGTCCCTTCTCATCCCTCCCT
TTTCGTCCCTTCTCTTCCCTCCCTTTTCGTTCTTTCTCACCCCTCTTTTT
TCGTTCTTTCTCATCCTTCCCTTTTTGTCCCTTCTCATTCCTCTGTTTTC
ATTACTTCTCATCCCTCTGTTTTCGTCCCTTATCATTCCTCTGTTTTCGT
TCCTTCTCATACTTCTCCTTTCGTTCCTTCTCAACCCTCCATTTTTGTCC
CTTCTCATCCCTCTGTTTTCATTACTTCTCATCTCTCTGTTTTCGTCCCT
TCTCTCCCCTCCCTATTCGTTCCTTCTCACCCCTCTTTTTTCGTTCCTTC
TCATCTTTCCCTTTTCGTTCCTGCTCATCCCTCCCTTTTCGTTCCTTCTT
ATCCCTCTGTTTTCGATCCTTATCATTCCTCTGTTTTTGTTCCTTCTCAT
CATTTTCCTTTCGTTCCTTCTCATCCCTCCATTTTCGTTCCTTCTCACCT
CTCCTTTTTCATTACTTCTCATCCCTCTGTTTTCGTCCCTTATCATTCCT
CTGTTTTCGCTCCTTCTCATACTTCTCCTTTCGTTCCTTCTCATCCCTC Run BLAST on NCBI protein sequence of TCONS_00060198-protein >TCONS_00060198-protein ID=TCONS_00060198-protein|Name=TCONS_00060198-protein|organism=Clytia hemisphaerica|type=polypeptide|length=321bp
MLRSFANLSLRILISVMLIKKHVSLCFRPFSFLPFRLFSSLTFRSFSPLL
FHCFSSLCFRPLSFLCFRSFSYFSFRSFSSLHLRPFSSLCFRPFSSLPFR
PFSSLPFRSFSPLCFRSFSYFSFRSFSTLNFRPFSSLPFRPFSSLPFRSF
SPLFFRSFSSFPFCPFSFLCFHYFSSLCFRPLSFLCFRSFSYFSFRSFST
LHFCPFSSLCFHYFSSLCFRPFSPLPIRSFSPLFFRSFSSFPFRSCSSLP
FRSFLSLCFRSLSFLCFCSFSSFSFRSFSSLHFRSFSPLLFHYFSSLCFR
PLSFLCFRSFSYFSFRSFSSL Run BLAST on NCBI transcript from alignment at scaffold_336:143885..145133 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060198 ID=TCONS_00060198|Name=TCONS_00060198|organism=Clytia hemisphaerica|type=transcript|length=1249bp|location=Sequence derived from alignment at scaffold_336:143885..145133 (Clytia hemisphaerica)
GAGGGATGAGAAGGAACGAAAGGAGAAGTATGAGAAGGAGCGAAAACAGA
GGAATGATAAGGGACGAAAACAGAGGGATGAGAAGTAATGAAAAAGGAGA
GGTGAGAAGGAACGAAAATGGAGGGATGAGAAGGAACGAAAGGAAAATGA
TGAGAAGGAACAAAAACAGAGGAATGATAAGGATCGAAAACAGAGGGATA
AGAAGGAACGAAAAGGGAGGGATGAGCAGGAACGAAAAGGGAAAGATGAG
AAGGAACGAAAAAAGAGGGGTGAGAAGGAACGAATAGGGAGGGGAGAGAA
GGGACGAAAACAGAGAGATGAGAAGTAATGAAAACAGAGGGATGAGAAGG
GACAAAAATGGAGGGTTGAGAAGGAACGAAAGGAGAAGTATGAGAAGGAA
CGAAAACAGAGGAATGATAAGGGACGAAAACAGAGGGATGAGAAGTAATG
AAAACAGAGGAATGAGAAGGGACAAAAAGGGAAGGATGAGAAAGAACGAA
AAAAGAGGGGTGAGAAAGAACGAAAAGGGAGGGAAGAGAAGGGACGAAAA
GGGAGGGATGAGAAGGGACGAAAATTGAGGGTCGAGAAGGAACGAAAGGA
GAAGTATGAGAAGGAGCGAAAACAGAGGGGTGAGAAGGAACGAAAAGGGA
GGGAAGAGAAGGGACGAAAAGGGAGAgatgagaagggacgaaaacagagg
gatgagaagggacgaagatggagggatgagaaggaacgaaaggAGAAGTA
TGAGAAGGAGCGAAAACAGAGGAATGATAAGGGACGAAAACAGAGGGATG
AGAAGCAATGAAAAAGGAGGggtgagaaggaacgaaaagtGAGGGAAGAG
AAGAGACGAAAGGGAAGGAATGAGAAGGGACGAAAACAGAgggatacatg
tttttttataagcataacgcttataagtatacgaaggctcagatttgcaa
aactcctaagcataacatgagcatatatgtcagcctaaaatatttttgaa
gtggtcatttttatctgtttaaaaaggtttggtagatgtcaagtaaaaaa
ataagaccTTCCACGTCTCGctaacattccactgctcccaaagtctgaac
aaatttttacaaaatttctgaaattgagataaaaacttggctcggggtga
atcataagcatgattcttaagcatataataagcataaactatgcctggat
gcattgagaacttaagcatacacgagcctgaccaaggggcatacacttN Coding sequence (CDS) from alignment at scaffold_336:143885..145133 >TCONS_00060198 ID=TCONS_00060198|Name=TCONS_00060198|organism=Clytia hemisphaerica|type=CDS|length=963bp|location=Sequence derived from alignment at scaffold_336:143885..145133 (Clytia hemisphaerica)
GAGGGATGAGAAGGAACGAAAGGAGAAGTATGAGAAGGAGCGAAAACAGA
GGAATGATAAGGGACGAAAACAGAGGGATGAGAAGTAATGAAAAAGGAGA
GGTGAGAAGGAACGAAAATGGAGGGATGAGAAGGAACGAAAGGAAAATGA
TGAGAAGGAACAAAAACAGAGGAATGATAAGGATCGAAAACAGAGGGATA
AGAAGGAACGAAAAGGGAGGGATGAGCAGGAACGAAAAGGGAAAGATGAG
AAGGAACGAAAAAAGAGGGGTGAGAAGGAACGAATAGGGAGGGGAGAGAA
GGGACGAAAACAGAGAGATGAGAAGTAATGAAAACAGAGGGATGAGAAGG
GACAAAAATGGAGGGTTGAGAAGGAACGAAAGGAGAAGTATGAGAAGGAA
CGAAAACAGAGGAATGATAAGGGACGAAAACAGAGGGATGAGAAGTAATG
AAAACAGAGGAATGAGAAGGGACAAAAAGGGAAGGATGAGAAAGAACGAA
AAAAGAGGGGTGAGAAAGAACGAAAAGGGAGGGAAGAGAAGGGACGAAAA
GGGAGGGATGAGAAGGGACGAAAATTGAGGGTCGAGAAGGAACGAAAGGA
GAAGTATGAGAAGGAGCGAAAACAGAGGGGTGAGAAGGAACGAAAAGGGA
GGGAAGAGAAGGGACGAAAAGGGAGAgatgagaagggacgaaaacagagg
gatgagaagggacgaagatggagggatgagaaggaacgaaaggAGAAGTA
TGAGAAGGAGCGAAAACAGAGGAATGATAAGGGACGAAAACAGAGGGATG
AGAAGCAATGAAAAAGGAGGggtgagaaggaacgaaaagtGAGGGAAGAG
AAGAGACGAAAGGGAAGGAATGAGAAGGGACGAAAACAGAgggatacatg
tttttttataagcataacgcttataagtatacgaaggctcagatttgcaa
aactcctaagcat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060198-exon-scaffold_336-1491911889:143885..145133 | TCONS_00060198-exon-scaffold_336-1491911889:143885..145133 | Clytia hemisphaerica | exon |
| TCONS_00060198-exon-scaffold_336-1510915933:143885..145133 | TCONS_00060198-exon-scaffold_336-1510915933:143885..145133 | Clytia hemisphaerica | exon |
| TCONS_00060198-exon-scaffold_336-1575043694:143885..145133 | TCONS_00060198-exon-scaffold_336-1575043694:143885..145133 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_336 | supercontig | scaffold_336:143885..145133 . |
Blast
The following BLAST results are available for this feature:
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