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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060186 ID=TCONS_00060186|Name=TCONS_00060186|organism=Clytia hemisphaerica|type=transcript|length=674bp
GTAGACACTAAATTTTGCATCCATTTCtcagaagaaaatgaaaaataaaa
taaaacattgaaTCAACCAGAATAGAAGATTTGATTAAACCAAATAACGA
GTCAAAGCACCACGAAACAATGGAAACATCTACAATTGGAGCACTACGTG
TATCTTGTTTAGAAGTCGATTCTTTCTCTCACTCAACAAATCCTGAATAC
TTTTCAAGAGAGTTTGATGAACATACCCAACATGATGTTTTGAGGCTTAA
AAATGTTTGTTGGCTTGAGATGAAACACACTTTTAAACTGGTTAAGCGTG
GCGAATATCAGTTTGTTATGAGAATGAAGTTTGGAGAAGATTTTTACTGG
CCTTCAGGAGATGGTGGGGAAATGGTTCATATCAAGTCTTGTTGGAGGAG
CAATAAAAATGATGCCAATTTTGAAAATGCATTTAATTTTCATACCAACG
ATTGGGAAAAAATTCGAGCATATATTAATGAAGGGACacctttagaaaat
ttttctgcTGGCTGTTCATTTAAGAATCATGATAAAGAGTCTGGTTGGTT
TGATTTTGTAGTGAATGAATTGATTTCCCTGGATGATAATGAAAATGAAG
TACTTGTTTGGTTTGCTGATAGAGAGAATCCATGGTGGAAATCTGGTTTA
ATATGGGATTATATTGAATTGCTC Run BLAST on NCBI transcript from alignment at scaffold_336:203472..204548- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060186 ID=TCONS_00060186|Name=TCONS_00060186|organism=Clytia hemisphaerica|type=transcript|length=1077bp|location=Sequence derived from alignment at scaffold_336:203472..204548- (Clytia hemisphaerica)
GTAGACACTAAATTTTGCATCCATTTCTCAGAAGAAAATGAAAAATAAAA
TAAAACATTGAATCAACCAGAATAGAAGATTTGATTAAACCAAATAACGA
GTCAAAGCACCACGAAACAATGGAAACATCTACAATTGGAGCACTACGTG
TATCTTGTTTAGAAGTCGATTCTTTCTCTCACTCAACAAATCCTGAATAC
TTTTCAAGAGAGTTTGATGAACATACCCAACATGATGTTTTGAGGCTTAA
AAATGTTTGTTGGCTTGAGATGAAACACACTTTTAAACTGGTTAAGCGTG
GCGAATATCAGTTTGTTATGAGAATGAAGTTTGGAGAAGATTTTTACTGG
CCTTCAGGAGGTGCTGGGGAAATGGTTCGTATTAAGTCTTGTTGGAGGAG
CAATAAAAATGATGCAAATTTTGAAAATGCATTTAATTTTCATACCAAGG
ATTGGGAAAAAATTCGAGCATATATCAATGAAGGGACACCTTTAGAAGAT
TTTCCTGATGGCTGTTCATTTAAGAATCACGATAAAGAGTCTGGTTGGTT
TGATTTTGTAGTGAATGAATTGATTTCCCTGGATAATAATGAAAATGAAG
TACTTGTTTGGTTTGCTGATAGAGAGAATCCATGGTGGAAATCTGGTTTA
GTATGGGATTATATTGAATTGCGTCCTCTTGTAGATTGAACATTTTGTTT
TGATGAATCTAATTTGTATCTTGAANATGAAATTTGGAGAAGATTTTTAC
TGGCCTTCAGGAGATGGTGGGGAAATGGTTCATATCAAGTCTTGTTGGAG
GAGCAATAAAAATGATGCCAATTTTGAAAATGCATTTAATTTTCATACCA
ACGATTGGGAAAAAATTCGAGCATATATTAATGAAGGGACACCTTTAGAA
AATTTTTCTGCTGGCTGTTCATTTAAGAATCATGATAAAGAGTCTGGTTG
GTTTGATTTTGTAGTGAATGAATTGATTTCCCTGGATGATAATGAAAATG
AAGTACTTGTTTGGTTTGCTGATAGAGAGAATCCATGGTGGAAATCTGGT
TTAATATGGGATTATATTGAATTGCTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060186-exon-scaffold_336-1575043694:204189..204548 | TCONS_00060186-exon-scaffold_336-1575043694:204189..204548 | Clytia hemisphaerica | exon |
| TCONS_00060186-exon-scaffold_336-1575043694:203472..203785 | TCONS_00060186-exon-scaffold_336-1575043694:203472..203785 | Clytia hemisphaerica | exon |
| TCONS_00060186-exon-scaffold_336-1510915933:204189..204548 | TCONS_00060186-exon-scaffold_336-1510915933:204189..204548 | Clytia hemisphaerica | exon |
| TCONS_00060186-exon-scaffold_336-1510915933:203472..203785 | TCONS_00060186-exon-scaffold_336-1510915933:203472..203785 | Clytia hemisphaerica | exon |
| TCONS_00060186-exon-scaffold_336-1491911889:204189..204548 | TCONS_00060186-exon-scaffold_336-1491911889:204189..204548 | Clytia hemisphaerica | exon |
| TCONS_00060186-exon-scaffold_336-1491911889:203472..203785 | TCONS_00060186-exon-scaffold_336-1491911889:203472..203785 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_336 | supercontig | scaffold_336:203472..204548 - |
Blast
The following BLAST results are available for this feature:
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