TCONS_00060181 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060181
Unique NameTCONS_00060181
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length183

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060181 ID=TCONS_00060181|Name=TCONS_00060181|organism=Clytia hemisphaerica|type=transcript|length=183bp
CTTGGTCTACCTGCATATTTTGAACAAGTCTTGGATTTTAAGATTGAGAA
TGATGGTCTCCTGTCGGCTTTACCGTATCTTGGCTCATGTATTGTCTACT
TGGCTATCGGATTTATATCGGATTACATAAGAAAACATCATCTGTCAACG
ACTTATACTAGAAAACTCATCGCCTGCTTTGGT
Run BLAST on NCBI

transcript from alignment at scaffold_336:186271..186760-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060181 ID=TCONS_00060181|Name=TCONS_00060181|organism=Clytia hemisphaerica|type=transcript|length=490bp|location=Sequence derived from alignment at scaffold_336:186271..186760- (Clytia hemisphaerica)
CTTGGTCTACCTGCATATTTTGAACAAGTCTTGGATTTTAAGATTGAGAA
TGTGAGTATTCTGTTAATAAATTTTTGTTTTTACATAAGTGGGGAACATA
TCAAGACACATATTTCATAGCAGGGTAGTGTCTGCCTATTCTTATATTAT
GTTCATATAAACAAAAAATGTTTTCTTGCTCCACATCCTTGTTTAATCAA
TCAAATTAATTAAATTCCGAATGGCTCATAAATCTAAATTTGGCGGGATA
AAATTTTGGCGAATTTGACGAATTTTTGAGGCTATTCGCCAAATTCGCTA
AAATTTCTTCCCGCCAAAATTTCTTCTCTTAAGGTAGTCTCATTATTTCC
TTTTTAAGGATGGTCTCCTGTCGGCTTTACCGTATCTTGGCTCATGTATT
GTCTACTTGGCTATCGGATTTATATCGGATTACATAAGAAAACATCATCT
GTCAACGACTTATACTAGAAAACTCATCGCCTGCTTTGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037857XLOC_037857Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060181-exon-scaffold_336-1575043694:186710..186760TCONS_00060181-exon-scaffold_336-1575043694:186710..186760Clytia hemisphaericaexon
TCONS_00060181-exon-scaffold_336-1575043694:186271..186402TCONS_00060181-exon-scaffold_336-1575043694:186271..186402Clytia hemisphaericaexon
TCONS_00060181-exon-scaffold_336-1510915933:186710..186760TCONS_00060181-exon-scaffold_336-1510915933:186710..186760Clytia hemisphaericaexon
TCONS_00060181-exon-scaffold_336-1510915933:186271..186402TCONS_00060181-exon-scaffold_336-1510915933:186271..186402Clytia hemisphaericaexon
TCONS_00060181-exon-scaffold_336-1491911889:186710..186760TCONS_00060181-exon-scaffold_336-1491911889:186710..186760Clytia hemisphaericaexon
TCONS_00060181-exon-scaffold_336-1491911889:186271..186402TCONS_00060181-exon-scaffold_336-1491911889:186271..186402Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_336supercontigscaffold_336:186271..186760 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060181 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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