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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060122 ID=TCONS_00060122|Name=TCONS_00060122|organism=Clytia hemisphaerica|type=transcript|length=1092bp
GATGTTCAGCGTCGACTTCCATCTTGTTTTAAAAAAGTAGGAAAAAGGGA
ATTATGCACTTGAATCTCTCAAATAGGTAAAGcaatgattttttcaagaa
aCCATAAATGATAGAGAACGATTGTGAATTTAAAATCTTGTAATGAAGTG
TAAAAAATAGTTTCAAAGTGACTTAAAATAACCGTTATTTCGTGAAAATA
ACTTTAACGAACGGGAGAAGGTACGGAATATAAAGTTTACTTTGACCAAA
TAAATGTAGCATTTGGACGTACGCAAGCAGGGAGCTGGTTCATATTTTAA
CGTTACTTTTTGAACTTTGGTTCTATTTTCAGAATTCAAAATCATTATGG
AGGACTTAGTTAACGACGAGAGAAAGTGGTGCGAAAACCAGCACGGAATT
GTTGATTCATTGCTGGAGCCAATTTGTTATTGTACTCTCATTGTTTCCAT
TGGACCTTATCTCTCCAAATATTATTTCGTCATCACCATCGTAACTCTGA
TCCTTGTTGTCCTGGCACTTCACCTCAAACGCGAACGATGTGCTAAAAAA
AGTTTACAGGAACAGTTTTTCATACGGCCTGGAAGAGGGAAAACTTTGAT
CGTTCGAAACAAAGCTATCGGTGTGCCCGGGAAAAGTCAAGAAGATTTGG
CGCGTTTTCATAATGGTTTTCGACGCGAGAATTATGCATCGGAAAAACGA
TCAAGCACACGAAACAGACTGTACAAATTGAAAGGACATAAGTTGTTCAG
AACAATgccttcttgatttttttccttgGTCCACAGGTCCACATAACGAA
TGCATCCATAACTCTAACAATTTCCTTGTTCTGTCCGTGTCGTTTGAGTT
ACGGAGACTCTATTAGTATAAACAAATGTAAGCAATtgtaaattttagaa
aaaaatgccTATTCTTCATCGAAGATTATTTTGTACATCAGCCCCCAAAA
TCCTGTTGCAGAAAGGGATGTTATTCTACAAGTTTTGTTCCAATTCGATT
TTTATTTCGACAGGGAGAAAGACACTGTGATGCTAATAAAAATGTCGTTG
TTTTCAAAAAGTCAGTGCAAAAgctatatttttatgttttac Run BLAST on NCBI transcript from alignment at scaffold_334:175164..176255- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060122 ID=TCONS_00060122|Name=TCONS_00060122|organism=Clytia hemisphaerica|type=transcript|length=1092bp|location=Sequence derived from alignment at scaffold_334:175164..176255- (Clytia hemisphaerica)
GATGTTCAGCGTCGACTTCCATCTTGTTTTAAAAAAGTAGGAAAAAGGGA
ATTATGCACTTGAATCTCTCAAATAGGTAAAGCAATGATTTTTTCAAGAA
ACCATAAATGATAGAGAACGATTGTGAATTTAAAATCTTGTAATGAAGTG
TAAAAAATAGTTTCAAAGTGACTTAAAATAACCGTTATTTCGTGAAAATA
ACTTTAACGAACGGGAGAAGGTACGGAATATAAAGTTTACTTTGACCAAA
TAAATGTAGCATTTGGACGTACGCAAGCAGGGAGCTGGTTCATATTTTAA
CGTTACTTTTTGAACTTTGGTTCTATTTTCAGAATTCAAAATCATTATGG
AGGACTTAGTTAACGACGAGAGAAAGTGGTGCGAAAACCAGCACGGAATT
GTTGATTCATTGCTGGAGCCAATTTGTTATTGTACTCTCATTGTTTCCAT
TGGACCTTATCTCTCCAAATATTATTTCGTCATCACCATCGTAACTCTGA
TCCTTGTTGTCCTGGCACTTCACCTCAAACGCGAACGATGTGCTAAAAAA
AGTTTACAGGAACAGTTTTTCATACGGCCTGGAAGAGGGAAAACTTTGAT
CGTTCGAAACAAAGCTATCGGTGTGCCCGGGAAAAGTCAAGAAGATTTGG
CGCGTTTTCATAATGGTTTTCGACGCGAGAATTATGCATCGGAAAAACGA
TCAAGCACACGAAACAGACTGTACAAATTGAAAGGACATAAGTTGTTCAG
AACAATGCCTTCTTGATTTTTTTCCTTGGTCCACAGGTCCACATAACGAA
TGCATCCATAACTCTAACAATTTCCTTGTTCTGTCCGTGTCGTTTGAGTT
ACGGAGACTCTATTAGTATAAACAAATGTAAGCAATTGTAAATTTTAGAA
AAAAATGCCTATTCTTCATCGAAGATTATTTTGTACATCAGCCCCCAAAA
TCCTGTTGCAGAAAGGGATGTTATTCTACAAGTTTTGTTCCAATTCGATT
TTTATTTCGACAGGGAGAAAGACACTGTGATGCTAATAAAAATGTCGTTG
TTTTCAAAAAGTCAGTGCAAAAGCTATATTTTTATGTTTTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060122-exon-scaffold_334-1575043694:175164..176255 | TCONS_00060122-exon-scaffold_334-1575043694:175164..176255 | Clytia hemisphaerica | exon |
| TCONS_00060122-exon-scaffold_334-1510915933:175164..176255 | TCONS_00060122-exon-scaffold_334-1510915933:175164..176255 | Clytia hemisphaerica | exon |
| TCONS_00060122-exon-scaffold_334-1491911889:175164..176255 | TCONS_00060122-exon-scaffold_334-1491911889:175164..176255 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_334 | supercontig | scaffold_334:175164..176255 - |
Blast
The following BLAST results are available for this feature:
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