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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060112 ID=TCONS_00060112|Name=TCONS_00060112|organism=Clytia hemisphaerica|type=transcript|length=913bp
TAGTTATTTGGGACATTTTACGATGTTGGATCAAACTTCACCCGATCAAC
CGTAAAAAGATCACGGAACGGTCTCCGGCGCACATCATTCTTGAGAAGGA
TCCTGAATTAGAAGCATCCTTCGAAATATTGAAAGAAGCCACTCCCAAAT
CAAAGCAAATGAAATTGACACGCTTCCCCATCAACCCTGAAGCAGACTGG
GGACCAAAAGCAAGGGCAAAGCAGTCGACGCAGTTTTCGAGTTTAGCGGA
AAAACGTCATGCTCTCCAAGGGAAACGAACGCTGAAGAAAACTGATCCTG
ATTTTCATAAACAATTTCCATGTAAAAGGTTTAAACGTGGTGAGTGTGAA
CTAGGAACCACGTGCAAGTATAATCACCCGGTAACGAAAGATGATGTAGG
GCAAACTCGTGAAAAGGACAGTAAGGAGGAAAACCCCTTAAACGAGACAG
AGGAATCCCCTCTTGCGATGGAGTCTTGATTGGGttaatctttatttttt
aggaaatattttttatatctaAATCAAtgctttttgtaaattttatattG
AGATCTGATTGGCTAAATCTTTAGTATCTGCTTTAAGATATTGACTTCTA
AAACACCACGTGACAACATGGCAGAAAAATCGTTCTCTTTTCCTCATTGG
AAAATGTGTCCCCCACTGGGCGTATACATGAGGAAAAAGGATCTTAGAAA
TGTTGTGCTCTAAACAATATACTTTGAAATCCAGTTGAAAATAACCATCA
TTGACTTGCCATTTGAATCCCCCATTTATAGAGATTAGATACTGGGTTAT
GATATGATTGATTTGATCTAAGACTTATTGTGTCTAAAAAAGGAATTAGT
CAACTGGAAGATCGGTCAATTTCAGCGTTTTAATttaattactttaggcg
tacaaactttcac Run BLAST on NCBI protein sequence of TCONS_00060112-protein >TCONS_00060112-protein ID=TCONS_00060112-protein|Name=TCONS_00060112-protein|organism=Clytia hemisphaerica|type=polypeptide|length=158bp
VIWDILRCWIKLHPINRKKITERSPAHIILEKDPELEASFEILKEATPKS
KQMKLTRFPINPEADWGPKARAKQSTQFSSLAEKRHALQGKRTLKKTDPD
FHKQFPCKRFKRGECELGTTCKYNHPVTKDDVGQTREKDSKEENPLNETE
ESPLAMES Run BLAST on NCBI transcript from alignment at scaffold_334:97106..106111- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060112 ID=TCONS_00060112|Name=TCONS_00060112|organism=Clytia hemisphaerica|type=transcript|length=9006bp|location=Sequence derived from alignment at scaffold_334:97106..106111- (Clytia hemisphaerica)
TAGTTATTTGGGACATTTTACGATGTTGGATCAAACTTCACCCGATCAAC
CGTAAAAAGATCACGGAACGGTCTCCGGCGCACATCATTCTTGAGAAGGA
TCCTGAATTAGAAGCATCCTTCGAAATATTGAAAGAAGCCACTCCCAAAT
CAAAGCAAATGAAATTGACACGCTTCCCCATCAACCCTGAAGCAGACTGG
GGACCAAAAGCAAGGTATGATACTAACGTTTTCTAGTAATATGTGACTTT
TTGAAAAGAAGTAATATCAGCGAGTATAAAAAAAATTGCTGGGCTGGGAC
AAGCCATCAAGTATTGTTTTAGTGGACTAAATAATGTTTTGCGAATTCGC
TAATTAAGACTTTTAAAAATAATTTACATAATATTCAATTTCTACTTCTC
GAGTAAAAACTAAAAATATATACTACAGTATGTGGCCCCCAAAACGTCGA
TCAAATTTAAAATTTCTTTCAAATCTAGAGGAAAAGAGGTTTTACAAAAA
TTTTTGCATCATGAAAAACTTTAACATCTCTACTTTATTTCCCGGAAGTT
CTTTTTCAAAATTTTCAATTTCAACGATATTTTTCAATTGCTTAAAGATA
GGTAGCTTCTTTCTAATAGCCCCCAAAACGGAGGTTTGCAATTTTAGCGA
TTTCTCGAGATTTTTTCAAGGTATGAATACAAAATTTAGACCATAGTTTG
AAAATGTGATTTAGAGGTTTTTGGGCATAATTTTGTTTGATAAAATTTTT
ACAGTATACCCCTGGTTCTTAAAACGCAGGTTTGGGGCCCCAAAACGTAG
GTGCAGTTAAAATCAAATTATGAAGCCCAGTAGTAATAGGGGTAGAAACT
ATGAACATATTTGTATTTTCCCGATGGATGTAAAATTTATGATTTTTGTA
AAATATTTCAAGATTTTCGATGATGCAAAGTCCAAACTGAAAATTTAGAA
ATTTTAAAAATGAAAATTTTGATTTAACAACGTCTTAATCAAGTTTCTGG
AAACCAATCTCTTTTGAAAATAGTTCCTTCATTCATGTATGGAATATTCT
GGGAAAATTTTAGATAAAAAGCTTAACTGAAACTGAAAATATCAAGCTTT
AAAGGTATTTTTCTCCTATATTTTACGAAAAAATGACAGAATTTTCCGTT
TTTGCTGATTCAGCGAAAACTTTTATATTTAATGTTAATTTTTTATTATG
AACTATTAAGTCAAGCTGATAGGAATGGAATTCCAAGATTTTTTGCTTTT
TCTCATATTTAGAATTATCAGTTTTATTAATGTTGATATTCTAGAGCCCC
AAAATACTGGTTGACCTTAAAGATGCTACACGTTTTTTTTTATTTTCAGA
AACATAAGGCTCAGAATGCTTAAAAACTAAGAAACATATAAGAAACATGC
TGAGGCTGAGAATGAGAAAATAACATTTTTTAATTCGGTTGTTTTTTTAA
ACCTTCCAATCCAGCCTTCCATAAGGCTGATTATGTTAAATAGTTTAGAA
ACATGTAAGAAACATTTAAGGCTCAAAAGGCCGATTTCTTAAGAAACATT
GCTTAAGGTAAAGCTAGTTTCTTAAAAAAAACAAACGTGTATATCTTTTA
CCCATCCTCTAAAGTCACAGATGTGTCTGCATTTTCTAAAAGGCATTAGG
TGTAGAAAGTTTCCTATACCCCATTTTCATAACTTACTTTTAATATCCAA
GGAGCTAGAGTGAGTTATATGCAATTTTTTATCTAATTTTGGTGTTGAAA
TATTTCCTTCAGACGGAAATATGTAATTTTGAGCCTGTCTCAAACCATCA
AAAACATGCTCATTTTTAAGTATAACCATCATTCTTTCAAAATAAACAAA
AATCGTCTAATTCTGATAAATCGTCAAGTCAGAATCATCCTTTTAATGCC
GACCACCGTTTTAGGGGGCCGTCTCCGTTTTGGGGCCATATACTGTACTA
TCCGTTTACTTTCATTTTTTCTTGATTGCCTGAAACTCACCCGTGCATAT
ATAGTTTCTTCTCATGAATTGAAACTCGCCCGAGACTTTGGTGCATATGG
TATAGTTCTTCTCATAAGTTATGTCGGAGACAAACTTGCCTCATTTTAGA
AATGATGCTATACCATCGATGGATGTTACGTTTAATTATCGTTACTTTTT
AAATGAGGCAAGTGTTGTTCTCGAAATATTTTTATCAGTGAGTAAGCCTA
TAAGAAATTGTATCTAGTACAATTGCCAATCATTCTTTATGGATCACGAA
TCATCATTTCTGTACTCTTCAAAATCTGGTTTTGCTTCCACCTTGAATAT
CGTATGCCACTTTTGTCGCCTCTGTTTAAGTTGGATGCGTTTACCCATAG
GGCGTTCGGTGTGAAGCTTCCGCAGTTTTCGTACCAGAAGCCACCACTGT
TGAGCTCTTCGGCACAGTTAATGTCCGAGGACACGTCATTGTCAAACCCT
AATGTTGTGAACTCTCTGCCTTTTGCATCATCCAATATATCACTACCACC
AGTGATACGGCTTTTAGCTCTCAGCGTGTAATTTGCTGACTCACTCTCGA
TGTGAAATTTTGCATAAATCCATTCTTTGACATCTCCATCAAATGATTTC
AAGATGATTTTAATCTTTTGTTGTGTTTTGATACTGATCTTGTGCACTAT
TTCGTTGCCCAACCAGTAACTTCCTAATGAAAACGGATTTAAAAAACGAT
TCTGCAAACGCGGAACACAATAAATATTTTCCCAAAGAAATTACAATTTG
ACCCTTCTTGAATTATATATATTTTATCTAAAAGTTCAAAACTTATTTTC
GTGTTTCTCGGTGGACACATTAAACTCTTTTAAAGAATTAATTTTCCCCT
GAAGTCAAAGCTCTGAAATAAACCAATAAATTATTACCTTGAGGGTCACC
AAATCCGTGTTTATAAGATTGCCAGCCAACCTGGAAGTTCGTCTTTGCAT
CCACAATCCTTTGAAAGACCAACCAGGCTCCGTCTGAATCAAAATGGCAA
CGCACCGTTCGTTGCTCATCTCCCAACAGATTGATCTCATACGCACCTGT
ACTTGTTATGCCCATATCAGCCAGGTCTTGGCAGCTTCGTATCTCGGAAT
AAACATTGGAGTTTGTATCGTCTGCTAGATTCGCTTGTCGAGCAAATCGA
TTGAAAAAGTTGCAATGATGAAGTGTTGTTTGTACAATTGCCAATGAGTA
ACATTGCTTCTCGTAATGACATTTTGAGAAGCATTGTTGGAGTTTTGGTG
TCCGTAGAGAGCTGTACGGCGTGAGTGTTGTCTGTTTATACTTACCGACG
AGCACCAGATTCTTAGCAGATGCAATTTCTACACCAATGTTTTTGATGAT
TAAAAAGAGTACACAAACTTTGAACATTTTTGTTCGAAGACAGGTTCGTT
TTCTTTTTTCGTTTTCTGATACGATTCTCGCCCAATCTTGTTTTCAAAGA
TGTCGTTTTGATACAACAGTGATATTAAAATTATTATTTTTTTATTAATT
ACGAAATTGGAAATTTAAGCGGTGAAAATAATTATTAAAACGTTTATCAC
CCCTTACTGATATCTCATTCAAAACGAAAAATGATACAAATTTGAATTGG
TGAGGTGAAAAGGGGGGAATTCATAAACAAAAGAACGGCTGAAGTTGAAT
CGTCTCAATTTTTTTGGACAAAAAGAAGATAAGAGATGATTGATTTTATG
GACCTGGACAATGCCAAGTTTAGTCAAATCAAACGACAATTGATTAATAA
CTATGAAAAAATAAAAAAGTATATTACATGTCGTCTACTCAAACATACAA
AAAGTTAAATTCAAAGTTCCAAAACCTGTGAAATCTGTTGCGTTTTAGAC
AAAATTTGACATCAATCGTACTCTAACTGACAGAATTTTGAACTTTAAAA
GCCTGTATTCTTTATATGTTTGGATACAAGACTTGTAGTAGTATATATTT
TTTCTCAGATTTTCATGCTCTATCCGATGTTAATCATTGTTCATTTGAAA
AATCGTCAACTTTTTACTCATTTTGGGACTTATGAGTTTTGCCTACGGCG
TCAGTTTTTTTTCCATGAAACCTTTTTCCTAGCCTAATTTGTGGGCCCCC
TCTCAAAAAATCCTATCTACTTTCGATACGAACCAATCACATGCAGTTGA
GTTCCACGAAAGATGCTACGGGTCTTAAGGGTTGGCGTCTATAGGAAGCA
TAATAAACAGCTGTTTGTTTCTGGGGTATAAGTTCTTTTGTGGCACACTA
TTTTCCAGCAAACTGTCGAGTTTCGATTCTTCCTCTATGGATTTATATTG
AAATTCGATGGTTATTTCATTTTGAAATATTATGATACTTCTCTGTTTTT
CTTTCTGTCTGTCCGTCCGTCCGTCCGTCAATTCGTNAAAAAATAAAAAA
GTATATTACATGTCGTCTACTCAAACATACAAAAAGTTAAATTCAAAGTT
CCAAAACCTGTGAAATCTGTTGCGTTTTAGACAAAATTTGACATCAATCG
TACTCTAACTGACAGAATTTTGAACTTTAAAAGCCTGTATTCTTTATATG
TTTGGATACAAGACTTGTAGTAGTATATATTTTTTCTCAGATTTTCATGC
TCTATCCGATGTTAATCATTGTTCATTTGAAAAATCGTCAACTTTTTACT
CATTTTGGGACTTATGAGTTTTGCCTACGGCGTCAGTTTTTTTTCCATGA
AACCTTTTTCCTAGCCTAATTTGTGGGCCCCCTCTCAAAAAATCCTATCT
ACTTTCGATACGAACCAATCACATGCAGTTGAGTTCCACGAAAGATGCTA
CGGGTCTTAAGGGTTGGCGTCTATAGGAAGCATAATAAACAGCTATTTGT
TTCTGGGGTATAAGTTCTTTTGTGGCACACTATTTTCCAGCAAACTGTCG
AGTTTCGATTCTTCTTCTATGGATTTATATTGAAATTCGATGGTTATTTC
ATTTTGAAATATTATGATACTTCTCTGTTTTTCTTTCTGTCTGTCCGTCC
GTCAATTCGTTCGCCTGTTACCAGATTTTCTCGGGTTTGGACCTACCTTC
AGGGGGTCCTATAAATTAACTTGTGTATGTCCCGTTTCAACCTCGTTTCC
TGCGTATTATCAGCTATTTGATACTTACTGATAGCGCTAAATAATACCCT
GGCATTGTCTGCTTTTCGAACGCGTAAGATTATACGTAATTCAAAAACAA
AACGTCAGATTTTATTTGTTCCTGGGTTTGAAACCATTGCAGTTTCATGT
TTGCCTTTTCTTTTTCCTCTTGGTCATTGCTTACTGTTTTTCAGATTTTT
CATCTTAAAATATATTCGATTTCTATTATATGTATCCAAATAAATTTGTA
ATTTATCATGTGTTGAAAAAAAAAATGTCGACGTCTTTTGAAACCATTGC
ATTGCAGTGCAACTTTGTAACGTCAGATTTAAGGCCGGCCTCCACTTGCG
CGCGCTTCAATCGCACTTTTCGAGAAAAGCTGCCATGCTATTGGTCAAAA
GAAAAATGAAGCAACTCCATTGGCGCGAACTGACGTAACGGTTGAAAAAA
GTTGAAATGTGTTCAACTTTTTTTTCAAGCGCGCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNAAAAAATAAAAAAGTATATTACATGTCGTCTACTCAAACATACAA
AAAGTTAAATTCAAAGTTCCAAAACCTGTGAAATCTGTTGCGTTTTAGAC
AAAATTTGACATCAATCGTACTCTAACTGACAGAATTTTGAACTTTAAAA
GCCTGTATTCTTTATATGTTTGGATACAAGACTTGTAGTAGTATATATTT
TTTCTCAGATTTTCATGCTCTATCCGATGTTAATCATTGTTCATTTGAAA
AATCGTCAACTTTTTACTCATTTTGGGACTTATGAGTTTTGCCTACGGCG
TCAGTTTTTTTTCCATGAAACCTTTTTCCTAGCCTAATTTGTGGGCCCCC
TCTCAAAAAATCCTATCTACTTTCGATACGAACCAATCACATGCAGTTGA
GTCCCACGAAAGATGCTACGGGTCTTAAGGGTTGGCGTCTATAGGAAGCA
TAATAAACAGCTGTTTGTTTCTGGGGTATAAGTTCTTTTGTGGCACACTA
TTTTCCAGCAAACTGTCGAGTTTCGATTCTTCCTCTATGGATTTATATTG
AAATTCGATGGTTATTTCATTTTGAAATATTATGATACTTCTCTGTTTTT
CTTTCTGTCTGTCCGTCCGTCCGTCCGTCAATTCGTTCGTCTGTTACCAG
ATTTTCTCGGGTTTGGACCTACCTTCAGGGGGTCCTATAAATTAACTTGT
GTATGTCCCGTTTCAACCTCGTTTCCTGCGTATTATCAGCTATTTGATAC
TTACTGATAGCGCTAAATAATACCCTGGCATTGTCTGCTATTCGAACGCG
TAAAATTATACGCAATTCAAAAACAAAACGTCAGATTTTATTTGTTCCTG
GGTTCGAAACCATTGCATTGCAGTGCAACTTTGTAACGTCAGATTTTTTT
TCGGAGAGTTGTTTTTTCGCCGTAAAAATCGGTTTTTCTTATTTAGGGAA
ATTCCCTTTTACCACTCGCGATTGGCTTGGTATGATTTTTTATACAATGA
TGTAAAATGATGTCTTCAATCTGATCGATCTGCAGATGGAGTCCAATTTT
TGAAAAAATAATTTTTTGGGCAAATATGTGCCAAACAATGCCTAAAATTA
AGGTTTTTTGTACTTTGTGTGAAATGAAAATTGCTGGCCGATCTAAACTT
CTTTAAAGCAAGAAGTATGATCGATCTCGCCTCATATTCAAACTGTTCTT
GTTACAGGGCAAAGCAGTCGACGCAGTTTTCGAGTTTAGCGGAAAAACGT
CATGCTCTCCAAGGGAAACGAACGCTGAAGAAAACTGATCCTGATTTTCA
TAAACAATTTCCATGTAAAAGGTTTAAACGTGGTGAGTGTGAACTAGGAA
CCACGTGCAAGTATAATCACCCGGTAACGAAAGATGATGTAGGGCAAACT
CGTGAAAAGGACAGTAAGGAGGAAAACCCCTTAAACGAGACAGAGGAATC
CCCTCTTGCGATGGAGTCTTGATTGGGTTAATCTTTATTTTTTAGGAAAT
ATTTTTTATATCTAAATCAATGCTTTTTGTAAATTTTATATTGAGATCTG
ATTGGCTAAATCTTTAGTATCTGCTTTAAGATATTGACTTCTAAAACACC
ACGTGACAACATGGCAGAAAAATCGTTCTCTTTTCCTCATTGGAAAATGT
GTCCCCCACTGGGCGTATACATGAGGAAAAAGGATCTTAGAAATGTTGTG
CTCTAAACAATATACTTTGAAATCCAGTTGAAAATAACCATCATTGACTT
GCCATTTGAATCCCCCATTTATAGAGATTAGATACTGGGTTATGATATGA
TTGATTTGATCTAAGACTTATTGTGTCTAAAAAAGGAATTAGTCAACTGG
AAGATCGGTCAATTTCAGCGTTTTAATTTAATTACTTTAGGCGTACAAAC
TTTCAC Coding sequence (CDS) from alignment at scaffold_334:97106..106111- >TCONS_00060112 ID=TCONS_00060112|Name=TCONS_00060112|organism=Clytia hemisphaerica|type=CDS|length=954bp|location=Sequence derived from alignment at scaffold_334:97106..106111- (Clytia hemisphaerica)
GGCAAAGCAGTCGACGCAGTTTTCGAGTTTAGCGGAAAAACGTCATGCTC
TCCAAGGGAAACGAACGCTGAAGAAAACTGATCCTGATTTTCATAAACAA
TTTCCATGTAAAAGGTTTAAACGTGGTGAGTGTGAACTAGGAACCACGTG
CAAGTATAATCACCCGGTAACGAAAGATGATGTAGGGCAAACTCGTGAAA
AGGACAGTAAGGAGGAAAACCCCTTAAACGAGACAGAGGAATCCCCTCTT
GCGATGGAGTCTTGAGTTATTTGGGACATTTTACGATGTTGGATCAAACT
TCACCCGATCAACCGTAAAAAGATCACGGAACGGTCTCCGGCGCACATCA
TTCTTGAGAAGGATCCTGAATTAGAAGCATCCTTCGAAATATTGAAAGAA
GCCACTCCCAAATCAAAGCAAATGAAATTGACACGCTTCCCCATCAACCC
TGAAGCAGACTGGGGACCAAAAGCAAGGGCAAAGCAGTCGACGCAGTTTT
CGAGTTTAGCGGAAAAACGTCATGCTCTCCAAGGGAAACGAACGCTGAAG
AAAACTGATCCTGATTTTCATAAACAATTTCCATGTAAAAGGTTTAAACG
TGGTGAGTGTGAACTAGGAACCACGTGCAAGTATAATCACCCGGTAACGA
AAGATGATGTAGGGCAAACTCGTGAAAAGGACAGTAAGGAGGAAAACCCC
TTAAACGAGACAGAGGAATCCCCTCTTGCGATGGAGTCTTGAGTTATTTG
GGACATTTTACGATGTTGGATCAAACTTCACCCGATCAACCGTAAAAAGA
TCACGGAACGGTCTCCGGCGCACATCATTCTTGAGAAGGATCCTGAATTA
GAAGCATCCTTCGAAATATTGAAAGAAGCCACTCCCAAATCAAAGCAAAT
GAAATTGACACGCTTCCCCATCAACCCTGAAGCAGACTGGGGACCAAAAG
CAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060112-exon-scaffold_334-1575043694:105898..106111 | TCONS_00060112-exon-scaffold_334-1575043694:105898..106111 | Clytia hemisphaerica | exon |
| TCONS_00060112-exon-scaffold_334-1575043694:97106..97804 | TCONS_00060112-exon-scaffold_334-1575043694:97106..97804 | Clytia hemisphaerica | exon |
| TCONS_00060112-exon-scaffold_334-1510915933:105898..106111 | TCONS_00060112-exon-scaffold_334-1510915933:105898..106111 | Clytia hemisphaerica | exon |
| TCONS_00060112-exon-scaffold_334-1510915933:97106..97804 | TCONS_00060112-exon-scaffold_334-1510915933:97106..97804 | Clytia hemisphaerica | exon |
| TCONS_00060112-exon-scaffold_334-1491911889:105898..106111 | TCONS_00060112-exon-scaffold_334-1491911889:105898..106111 | Clytia hemisphaerica | exon |
| TCONS_00060112-exon-scaffold_334-1491911889:97106..97804 | TCONS_00060112-exon-scaffold_334-1491911889:97106..97804 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_334 | supercontig | scaffold_334:97106..106111 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000571 | Znf_CCCH |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046872 | metal ion binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0046872 |
metal ion binding |
Blast
BLAST of TCONS_00060112 vs. Swiss-Prot (Human)
Match: TRM1 (tRNA (guanine(26)-N(2))-dimethyltransferase OS=Homo sapiens GN=TRMT1 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.330e-27 Identity = 58/132 (43.94%), Postives = 82/132 (62.12%), Query Frame = 3
Query: 6 IWDILRCWIKLHPINRKKITERSPAHIILEKDPELEASFEILKEATPKSKQMKLTRFPINPEADWGPKARAKQSTQFS--SLAEKRHALQGKRTLKKTDPDFH------KQFPCKRFKRGECELGTTCKYNH 377
+WDI+RCW K P+ R++++E SPA IL +P L+A+F I ++A P S+Q L RF NPEA+WGP+ RA+ + + ++ E+R LQ KR K+ D K FPCKRFK G C+ G C Y+H
Sbjct: 495 LWDIMRCWEKECPVKRERLSETSPAFRILSVEPRLQANFTIREDANPSSRQRGLKRFQANPEANWGPRPRARPGGKAADEAMEERRRLLQNKR--KEPPEDVAQRAARLKTFPCKRFKEGTCQRGDQCCYSH 624
The following BLAST results are available for this feature:
|
