TCONS_00060083 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060083
Unique NameTCONS_00060083
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length260

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060083 ID=TCONS_00060083|Name=TCONS_00060083|organism=Clytia hemisphaerica|type=transcript|length=260bp
ATCTATCTTGGAAAAACGAATGCATTTGTATATTTGTATTCCAAGTATAT
CCAAAGTAGTTCGATGCCGACGACTAGCTCTTGCAGGTCATACACGGCAA
GAAATGATAAACCATCTACTGACTTGGGTTCCAGAAAAGCTAAAACGCGT
TGGACGGACCATCATCACTTTGAAAGCACTTATTCAAGAAGACACTGGTC
TCGAGGGAAACGATCTGATAGCAGAAATGCAAGACCCAGAATCATGGAGG
AAGAACCTTG
Run BLAST on NCBI

transcript from alignment at scaffold_333:309975..310234

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060083 ID=TCONS_00060083|Name=TCONS_00060083|organism=Clytia hemisphaerica|type=transcript|length=260bp|location=Sequence derived from alignment at scaffold_333:309975..310234 (Clytia hemisphaerica)
CAAGGTTCTTCCTCCATGATTCTGGGTCTTGCATTTCTGCTATCAGATCG
TTTCCCTCGAGACCAGTGTCTTCTTGAATAAGTGCTTTCAAAGTGATGAT
GGTCCGTCCAACGCGTTTTAGCTTTTCTGGAACCCAAGTCAGTAGATGGT
TTATCATTTCTTGCCGTGTATGACCTGCAAGAGCTAGTCGTCGGCATCGA
ACTACTTTGGATATACTTGGAATACAAATATACAAATGCATTCGTTTTTC
CAAGATAGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037798XLOC_037798Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060083-exon-scaffold_333-1491911889:309975..310234TCONS_00060083-exon-scaffold_333-1491911889:309975..310234Clytia hemisphaericaexon
TCONS_00060083-exon-scaffold_333-1510915933:309975..310234TCONS_00060083-exon-scaffold_333-1510915933:309975..310234Clytia hemisphaericaexon
TCONS_00060083-exon-scaffold_333-1575043694:309975..310234TCONS_00060083-exon-scaffold_333-1575043694:309975..310234Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_333supercontigscaffold_333:309975..310234 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060083 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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