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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060066 ID=TCONS_00060066|Name=TCONS_00060066|organism=Clytia hemisphaerica|type=transcript|length=1158bp
ttaaaaaattatgaaaaatcaaaacgacAACTGTCAAAATGCCAAAGTCC
AGAAAGGACCATTTTCATCCATATCATCGTGAAAAATGttccaattttct
tcaaatttataTATGAACTGCATTTAAGTATGATCTAATAAATTCCAGTA
ACAGTTAGTACAGACAAAATCTGTGTCAAAAACACCAAAGTCCAGAAAGG
ATCATTTTCATCCATATCATCGTGAAAAATGttccaattttcttcaaatt
tacacatgaactGCATTTTAGTATGGTCTAATGAATTCCAGTAACAATTT
GTACAGAAAAAATCTGTGTCGAATTTGAAAAATCAAAGTAACGACCGACA
AAACGCCAAAGTCCAGAAAAGACCATTTTCATCCATATCATTGTGAAAAA
TGTTTCAATTTATTTCAAATTTACACATGGACTGCATTTTAGTATGTTCT
AATGAATTCCAGCAACAGGTTGTATGGAGAAAGTCTTTGTCAACTTTCAA
AAATCAAAACGACAACCGCCAATTCCAAATTGCCAAAGTCCAGAAAGGAC
AATTTTCATTCATAGCATCATGAAAAATGATCCAAACTTCTTTAAATTCG
TAGATTGGGTCATATTTTATGATACAAAGTCTAATTTTATCAATGGTTTG
CTCTAAAGAAGCTCCAATCCTTCTTTGAAATTCAAAGTTTTGGTTTTTTA
TGCATCTGGTAGAACCCAATCCAAATTATATGTATGTTTTCAACATGATT
AAGAGCAGAAACACTCCAAAAAGTTCCTTCCAAATCTTGCCATGTCATTT
GAGAAACATTATTCACCATATACTTTGTATATTATGTCCAATATCACCAA
GAAATGACCAGTTTTCAACTCAATCAAATTTAGAGTGTTTTTTGCTAAGC
AGCTTTGCTCCTGCCTGTCGCTTCGGGTAGCCATCTTGTTTCAAATACGC
TTTCGTTTTGTCGGCCAATCAAATCGCAGGATAGTCTCAAATTTCGCACA
GACCAATCAGATTGCAGTATAGTCCCAAATTGAAATCAAACACCAATCAG
ATTGCAGTATAGTCCCAAATTTGAAATCAAACAATAATTTGACACAGCTC
TATTGTTTCAGCAGTCAAATTTGGGAAAATTTGACACAATACGGCAATCT
GATTGGAC Run BLAST on NCBI transcript from alignment at scaffold_333:20599..21756 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060066 ID=TCONS_00060066|Name=TCONS_00060066|organism=Clytia hemisphaerica|type=transcript|length=1158bp|location=Sequence derived from alignment at scaffold_333:20599..21756 (Clytia hemisphaerica)
GTCCAATCAGATTGCCGTATTGTGTCAAATTTTCCCAAATTTGACTGCTG
AAACAATAGAGCTGTGTCAAATTATTGTTTGATTTCAAATTTGGGACTAT
ACTGCAATCTGATTGGTGTTTGATTTCAATTTGGGACTATACTGCAATCT
GATTGGTCTGTGCGAAATTTGAGACTATCCTGCGATTTGATTGGCCGACA
AAACGAAAGCGTATTTGAAACAAGATGGCTACCCGAAGCGACAGGCAGGA
GCAAAGCTGCTTAGCAAAAAACACTCTAAATTTGATTGAGTTGAAAACTG
GTCATTTCTTGGTGATATTGGACATAATATACAAAGTATATGGTGAATAA
TGTTTCTCAAATGACATGGCAAGATTTGGAAGGAACTTTTTGGAGTGTTT
CTGCTCTTAATCATGTTGAAAACATACATATAATTTGGATTGGGTTCTAC
CAGATGCATAAAAAACCAAAACTTTGAATTTCAAAGAAGGATTGGAGCTT
CTTTAGAGCAAACCATTGATAAAATTAGACTTTGTATCATAAAATATGAC
CCAATCTACGAATTTAAAGAAGTTTGGATCATTTTTCATGATGCTATGAA
TGAAAATTGTCCTTTCTGGACTTTGGCAATTTGGAATTGGCGGTTGTCGT
TTTGATTTTTGAAAGTTGACAAAGACTTTCTCCATACAACCTGTTGCTGG
AATTCATTAGAACATACTAAAATGCAGTCCATGTGTAAATTTGAAATAAA
TTGAAACATTTTTCACAATGATATGGATGAAAATGGTCTTTTCTGGACTT
TGGCGTTTTGTCGGTCGTTACTTTGATTTTTCAAATTCGACACAGATTTT
TTCTGTACAAATTGTTACTGGAATTCATTAGACCATACTAAAATGCagtt
catgtgtaaatttgaagaaaattggaaCATTTTTCACGATGATATGGATG
AAAATGATCCTTTCTGGACTTTGGTGTTTTTGACACAGATTTTGTCTGTA
CTAACTGTTACTGGAATTTATTAGATCATACTTAAATGCAGTTCATAtat
aaatttgaagaaaattggaaCATTTTTCACGATGATATGGATGAAAATGG
TCCTTTCTGGACTTTGGCATTTTGACAGTTgtcgttttgatttttcataa
ttttttaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060066-exon-scaffold_333-1491911889:20599..21756 | TCONS_00060066-exon-scaffold_333-1491911889:20599..21756 | Clytia hemisphaerica | exon |
| TCONS_00060066-exon-scaffold_333-1510915933:20599..21756 | TCONS_00060066-exon-scaffold_333-1510915933:20599..21756 | Clytia hemisphaerica | exon |
| TCONS_00060066-exon-scaffold_333-1575043694:20599..21756 | TCONS_00060066-exon-scaffold_333-1575043694:20599..21756 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_333 | supercontig | scaffold_333:20599..21756 . |
Blast
The following BLAST results are available for this feature:
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