TCONS_00060055 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060055
Unique NameTCONS_00060055
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1877

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060055 ID=TCONS_00060055|Name=TCONS_00060055|organism=Clytia hemisphaerica|type=transcript|length=1877bp
TAAATGTCCTGTACGTAgcaaatattatcaaaaatggTGTAGGCGTAAGC
TTTCTCTTTGTAAAAATTTGATGCAAAGCACACTTGGTGACGCAATAGCG
ATATGTACAGGAGTCTTTGTGAGCCGGTCgaataattattttgagtgatt
ttaacaatttttgtttcttttgattCGTTTTCTGAAACACTTGCTTGCCA
AATATATTTggaaaagaatttgaaattggcaaaatgacttgataatattg
aaaaattgagaTTCTAAACGTGTAGAGACGAATTTTGAAACGTAAAAGTG
ACTCTACATTTTGGTTTTGACTTTTGTTCGTAGACATCAGGGATAACTTG
TTGGTATcagaaatttaatttaaaaataacaGCAATAGTTAATTTAAAAG
GATCGCCAAGATGAGTTTTTCAAATGCGCAAGCAAACATGGAATCACGAA
TTGCAGGATTCGAAAAGAAGGAGAAACAATGCATCGCCAGAAAAGAGAAA
GCCGTGGAAAGAATTAACACAGCACGAGAAAAGCTCAGATTCATGAAAGA
AGTTCGGGCTGAAAGGCAAGACGCACTGGAACGTAAAGAATATAAACTAG
GCCAGTTAGAACAACGTTTAAAGACTGTTGAATATCGTATGGATGCAATC
AAACAAAGCATGAGGTCAAGGAACAATGCTAACGGAGATATCGGCAGAGA
AGAACAAAAGTTGAATGACACGTTAAAAAAACAATCGGAGTTGCAAGCAA
ACATGATCAGGAATATGAGACGAAGAGATACGATTGAGAAACAGATTCTC
GCCTTCCAAGAGAAAGAATCGAAGTACCGTGAAAAGATGAAAGAGCTAAA
AGATAAACTTTCCTACCGAATTGCAAGAGGTGATGAATGCAAAAAATCGA
TTCTAGAGAAAGTGGACAATATCAAGAAAATGCATGCTGCAATGCTTCAG
ATGGAACCAAAACTACGTGAAATGGTAACTCGAATGCGATGTGCAGAAGT
TACCGTCCTTGAGCTTGAAAAGAAGATCACAAGTAAAGAGAATGAAATCA
GAGCCAAACATAAAGACTGTCTTATTGCATGTGATCAAATCGAAATGAAT
GAAGTCAAATTCGAAAGACAACGTGAAAGAAAATACAAAGGGCCTGAAGC
TTTGAGATACCTTCAAGAGTAAATATAATGGAAAACTTCTGAACTGAACA
ATGATTGGTAGAGCTGACGAAGCTGAAAAAGCTAAAACTGTTATATGCAA
ATTGTAGTTAGTGAAATTCAAACTACCCCtgcttttttggtaaaaatgtg
TAAATATTGCTCAAAATATCAGCAATTCAAGAAAGCGAAAGATTCAAGAA
AAGAAGACTACTTTGTGTTATTTTAAAGTATATACttgtatatatttatt
tttgctaTATTGAATGGAAAAGTTATTTTTGgataaaaagtgaaaagaaa
tCTCTTGAATCAAATAAATCCTACTTCAATAAAAGAACCAAATCACCAAA
TCAACACCTCAGGTTACAGGCATTTTTTGGTCCAAACCCAAATATTAATG
ATATCATTAAAGCCAATCTAAAGccattcattttcattttaaaaaatcCT
CCAGTTTTCGGCTACGACTGTAATGAACAAATGCTGTGAAGATTAGATAA
AGGGATATGAATATAGGGACCATCAGCCAATNAAACGAATGCTGTGAAGA
TTAGATAAAGGGATATGAATATAGGGACCATCAGCCAATTCAGCGTATTA
GAATGGAAAATCAGTGTTCGACGTTATCACTGGTGGAAGCAACGTTATGA
TTTGGAACTTTAAAAAAGTGTCAAATCTTTTTCATCACCAAGGTACATGT
CCCATATTGCATGGACTAGTACTTAAG
Run BLAST on NCBI

protein sequence of TCONS_00060055-protein

>TCONS_00060055-protein ID=TCONS_00060055-protein|Name=TCONS_00060055-protein|organism=Clytia hemisphaerica|type=polypeptide|length=253bp
MSFSNAQANMESRIAGFEKKEKQCIARKEKAVERINTAREKLRFMKEVRA
ERQDALERKEYKLGQLEQRLKTVEYRMDAIKQSMRSRNNANGDIGREEQK
LNDTLKKQSELQANMIRNMRRRDTIEKQILAFQEKESKYREKMKELKDKL
SYRIARGDECKKSILEKVDNIKKMHAAMLQMEPKLREMVTRMRCAEVTVL
ELEKKITSKENEIRAKHKDCLIACDQIEMNEVKFERQRERKYKGPEALRY
LQE
Run BLAST on NCBI

transcript from alignment at scaffold_333:340241..348768-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060055 ID=TCONS_00060055|Name=TCONS_00060055|organism=Clytia hemisphaerica|type=transcript|length=8528bp|location=Sequence derived from alignment at scaffold_333:340241..348768- (Clytia hemisphaerica)
TAAATGTCCTGTACGTAGCAAATATTATCAAAAATGGTGTAGGCGTAAGC
TTTCTCTTTGTAAAAATTTGATGCAAAGCACACTTGGTGACGCAATAGCG
ATATGTACAGGAGTCTTTGTGAGCCGGTCGAATAATTATTTTGAGTGATT
TTAACAATTTTTGTTTCTTTTGATTCGTTTTCTGAAACACTTGCTTGCCA
AATATATTTGGAAAAGAATTTGAAATTGGCAAAATGACTTGATAATATTG
AAAAATTGAGATTCTAAACGTGTAGAGACGAATTTTGAAACGTAAAAGTG
ACTCTACATTTTGGTTTTGACTTTTGTTCGTAGACATCAGGGATAACTTG
TTGGTATCAGAAATTTAATTTAAAAATAACAGCAATAGTTAATTTAAAAG
GATCGCCAAGATGAGTTTTTCAAATGCGCAAGCAAACATGGAATCACGAA
TTGCAGGATTCGAAAAGAAGGAGAAACAATGCATCGCCAGAAAAGAGAAA
GCCGTGGAAAGAATTAACACAGCACGAGAAAAGCTCAGATTCATGAAAGA
AGTTCGGGCTGAAAGGGTAATTTTCATTACTTTCCCCTTTTTTTTGCAGT
ATAGTCGATTGGAATTCTTTTTACTCAGTGGAGGTAGGTGATGCTTGTTG
CTAGGGCGTTTTCCTATCAAGAGTAATTTCAAGGCTAGATTATCTAGTCT
GGACAGGGTCCTATTTGGTGTTTTATACAGAGATGCCATTACCTTAGGTT
TTATTCTTTCGGTTTTCAACATAGAATGTACAAGTTTGTACGAATTTTCA
CCTTGACGATTAAAACATGGATAACCTGAAAAGACCCAATAATTGCACAA
TTTCTATCATTTTCAAAGGACCCGCTGCATCCAACTCTTTTTGAACTTGT
CATCAATGTGGGTCGTTCTATGAAATACTGTTATTTCTTTGTAAACATAT
TATTTTTCATTTCTTCAAAGGGCAGTTTCCGACCGGGAGATTTTCTGTCT
CTTTTAAACCAGAACTAGTCCCTGGGGGTGTTAGATAAGCAGACAGCATG
CGTGCACAAGACTCATTTCTTCCAGAACCTTACCATGGAATCTTTTTGAC
CAATCAAAAACCAGGCTAGTGTCAATATAGTCAATAAGCCGATTTACCAA
ACTTCTGAATATTAATTGCCTGTAATTTCCACTCGCTAACATCTAATAGA
ACACATATTTATTTCTACAGCAAGACGCACTGGAACGTAAAGAATATAAA
CTAGGCCAGTTAGAACAACGTTTAAAGACTGTTGAATATCGTATGGATGC
AATCAAACAAAGCATGAGGTCAAGGAACAATGCTAACGGAGATATCGGCA
GAGAAGAACAAAAGTTGAATGACACGTTAAAAAAACAATCGGAGTTGCAA
GCAAACATGATCAGGAATATGAGACGAAGAGATACGATTGAGAAACAGAT
TCTCGCCTTCCAAGAGAAAGAATCGAAGTAAGGCTACTTTCGATTTCCAC
ACCAACCTCATACCAATGCTGTGCTTTAACACTTCGTTAGGTCAAATTGC
CGGTAATACTTCAAATAGGCATAACTTATGATGCAATAAGCTTTTATGCA
GTAACCGTTGCTAACACAAACCTACATAAAACTCTGCCCTAATTTGAGGA
TTTTGAAGCAGAACCCATTGACCACAGGAGCCTTTAATCTGAAAGAAAAT
TCTTTCAAGGAAAATCCACAATTTGCTATTTTCATCTGATCGAAGAGACG
GAGTGTCCTTGGACTAAAACTAAATTTAATACCTACCATGCTATCATTCT
ATTTTCTGGCCTGTTTCTTATCTTGCGTTTTATGTTCCATTTTTAGGTAC
CGTGAAAAGATGAAAGAGCTAAAAGATAAACTTTCCTACCGAATTGCAAG
AGGTGATGAATGCAAAAAATCGATTCTAGAGAAAGTGGACAATATCAAGA
AAATGCATGCTGCAATGCTTCAGATGGAACCAAAACTACGTGAAATGGTA
ACTCGAATGCGATGTGCAGAAGTTACCGTCCTTGAGCTTGAAAAGAAGAT
CACAAGTAAAGAGAATGAAATCAGGTAATGGCTAGCCCCTCGTTTCTTTC
TGTTAGTGTTGAAATTTCTGGTAGAAATTAAATACACCCCCTTCTCACAG
ACCCGCGGGATTTTTTTCAGCCAGTGATAGGATAGAAATACTCTTGTCTC
CCGAATAGACGGGGGGTCCGAATAAACAGGGGGGTAGGAAAATTTTCTAA
ATTCTAATAAGCGGGGGGATGGAATAAGAGGGGGGGGGGGGAATTTGAAG
AAAGAATTTTTTTTAACTGATATNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGTCT
TAATAAGAGCGGGGGGATGGATTTTTTTGTCTCTTAACAATTAGCGGGGG
GGACGTCTATTCGGGAGACAAGAGTAGAGGACCAAAACTCGATGGGGATT
GATATTCCCATGTTTTCTTATGGCTGGGGATTTAAATTCTATTGCTTTCG
AGCCAGAAAACTCAGTGAAGACGGAAAAAATAATACAATAATTTGCAGTG
TGGATTAGCTTATCTGAATATTTTCAGTGGGGGACAAATATTAGTGTATA
ATTTTCCACTGGGGACGATATTTTGGCCAATTTCTCCAGTGGGAAGGGCC
GGGAAGGGGTCTGTAAGAAGGGGATGTTTATATTGATGCTTCGTTTGAAT
CTGCGAATGATTTTCTAAGTTCTATTACTTGTACAAATGTTTGTGACCTG
AAACGAGCAAGCATTTTTCGCGAAGTTTGGCCTTTTTCACGAGCCTTTAT
ATACTTTTTGCCCCCGCAGGAGCGTAGCGACGAGGAGGCACTCATAGTTT
CACGCATAGATATTGGACTGAACTCTCGAAAATTGTTGTCTTGTCGCGCA
AGCATCCCCGTAGTTAGTCTCTTCCGTAAATGTTCGGTTTTTTTCCGGGA
CGGTAGTATACATATTTTCATATTANAGAGCTAAAAGATAAACTTTCCTA
CCGAATTGCAAGAGGTGATGAATGCAAAAAATCGATTCTAGAGAAAGTGG
ACAATATCAAGAAAATGCATGCTGCAATGCTTCAGATGGAACCAAAACTA
CGTGAAATGGTAACTCGAATGCGATGTGCAGAAGTTACCGTCCTTGAGCT
TGAAAAGAAGATCACAAGTAAAGAGAATGAAATCAGGTAATGGCTAGCCC
CTCGTTTCTTTCTGTTAGTGTTGAAATTTCTGGTAGAAATTAAATACACC
CCCTTCTCACAGACCCGCGGGATTTTTTTCAGCCAGTGATAGGATAGAAA
TACTCTTGTCTCCCGAATAGACGGGGGGTCCGAATAAACAGGGGGGTAGG
AAAATTTTCTAAATTCTAATAAGCGGGGGGATGGAATAAGAGGGGGGGGG
GGGAATTTGAAGAAAGAATTTTTTTTAACTGATATNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCTCCAACGATACCAAA
TTTATAAAGATTGAAGAATTCCTTCAAAAGTTATAGGTAAAAGAAAAAAG
AGTGCACACTTATCGTGAACAGACTTTAATTTATTTTTGTCTGTCATTTT
ATTGATAACTACCTTTATTGTTTATAGGGCTTCTTGAGCTTTAAATACCA
TCACATGGTCGTAACTCGAGAAAGTCCTTCTGAACTTAGTAAAACAACCG
GCAAAGTACAAAAAAGTTGAATGTGCGCATATGTAAAGTTGAATCTAAAC
GTGGTTGACTTTTTCTTTTGTTCTTCAAAATAATTTACCTCACTTAGAGT
GTTTTTACGTCTTTTCAGTGCGGTAAATCTTTTTCAAAAACCTGAAAAAA
GTTTGATTACCTTAAAGGAAGAAATTTTGGCGGGAATTTAATTTGGTGGA
TGGCCAAAAAAGTTTTTTCAGAGGGAATTTAATTTGGCGGATGGACGAAA
AAGCTAAATTTGGCGGGAATTTAATTTGGTGGATGGCCAAAAAAGTTTTT
TCAGAGGGAATTTAATTTGGCGGATGGACGAAAAAGCTAAATTTGGCGGG
TATTTAATTTGGCGGTCGCTTAAAAATCTAACCTTAAGATGGCGTAAAAA
CAGCGAAAAAATAGCGAAAACACCTTAAAAGAGATCATATTTTCAAAATG
TTTAATTTGGCGGGAATTTAATTTGGCGGATGGCGGAAAAAAGAAAATTT
TGGCGGGAATTTAATTTGGCGGATGGCGGAAAAAACAAATTTTGGCGGGA
ACTTAATTTGGCGGATTTCAGTCAAATCCGCCAAATCCGCCAAATTTTCT
TTCCGCCAAAATTTCTTCCTTTAAGGTACTTGTTAAACTTTACATGCGCA
CGTTTAACTTTTTCATGCAATTGTGATAGCCTAAATAACTTTCGCTCCAG
TGGTTTGGTGAAATAGCTCCAAATTCTGGCTTTCTAAGTTAGGAGAGACA
TTCCCGAAGGCATTTAACGGTGGTTAGACTAGGTACACAGACAGTCATAC
AGAAACACCATAAAGGGAAAGTATATCGCTAGCTATAAACTCAAAAAGTC
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTCTGA
ATGAACCACAATGGCATTCCTTTACTTTTCTTTTGACCAACAACATAGAA
GATTTTGCTTGAGAAGTGCAATCACAGCGTACGCTAGTGGAGCCTTAACC
CGGGCCTTAACTAGGATAAGTGAGTTTCTATTTCACCCAACTTAAGATGG
CGCAGAACTTTTTGATAAATTTTATATGCAGTATCCTCTTGACTATTGTT
TATTAGGCAAAGTAGCAATAGAGAAATGTTGAAATATAGCAGCCAATGAA
AAAAAACAGCTATTTCTGATTGGTTACCTTGTGGATTTATTCACTGCGTA
TGTCCATATATTTTGCCTACAATCTAAGATGTCTGCGACATTATTAGAAA
AGGTCTATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTATAAGAAAGAAACTAGGAGAAAAAACA
AACAAACAGGAGATGTGAAAATCAGTAAGATAATGATAGCATAACTTTTT
AAATATATTTTTGAGAGGCTTTTCCAGCTTTTCATTAAATTTTATTAAGT
TATCAAGCTGCATGAATTCCTCAAGTATGTATTTTTTTATAATGGAATAT
AATTTTTTTTTTCAAGCAAACGCCTCAATCAATCAATAAATCAATCTATC
AATCAATAAATCAACCAATCAACCAATCAATCAATAATTAAATCAATCAA
TTATTCCTGATTATTTTTTAATGTTTAATCTTTAAAGCATTAAAGCTGTA
TAAGTGCATGACATGATCTTTATGTGGGGGCATTTAGTGAAAGCTATGAC
TAGTTTAATAATAATGAGGCAATTCAAAAAACTGAAAAATTCTAGAGATT
TTTTAAATTCTAGTGAATCTAATTTTTGAATTTAGAATAGTTCTATAATT
TCTTAACCATTCTTACACCCCTGTCTCGCAGCCCCGGTGGAACTTCTTCC
CAAAGTGGAGATCAAAATTTATTATTTATTACAAATTCTATTGTTCCTTG
TTCAAAAAATCCAGTGGGAAGGTTTTGGATTTTTTTTCTATTGAATTTTA
AATGGGGATGAAAACAAAGTCAATTTTCCCAGCGGGACAAAAATGAAGGG
TACATTTCCGACAGGGTGTTCACTGGTTAGGAGTGTAGTCTTCTTGTGAA
AATTTAATTGTTCCCTTGGCAATAGCACGCTGCTGTGCAGACGTCATAAT
TGAATTATTACTTTTAACATTTGATCGAAATTCAATCCCTATGGCTTCGC
TATACAAATGTCCTTGTTATTACTTTTTTATTGTCAATAAGTGTAATTGA
CTTGCAAAAGCAATTAATGCAAAGGATGATGAGATTAAAACTCGAACAAA
CAATAATTTTGATGTCTATTTTTAGAATCACTACGGTATGCTATTGAAAT
CTTGTATCTTGTATGTAAGTTAATTTGCGCTTAGGTCGATGCTTAGGTAA
ATCAACCCTCATGGAGAGAAGATTTAATGTTTGATAATTGTCTATTTTTT
AGAGCCAAACATAAAGACTGTCTTATTGCATGTGATCAAATCGAAATGAA
TGAAGTCAAATTCGAAAGACAACGTGAAAGAAAATACAAAGGGCCTGAAG
CTTTGAGATACCTTCAAGAGTAAATATAATGGAAAACTTCTGAACTGAAC
AATGATTGGTAGAGCTGACGAAGCTGAAAAAGCTAAAACTGTTATATGCA
AATTGTAGTTAGTGAAATTCAAACTACCCCTGCTTTTTTGGTAAAAATGT
GTAAATATTGCTCAAAATATCAGCAATTCAAGAAAGCGAAAGATTCAAGA
AAAGAAGACTACTTTGTGTTATTTTAAAGTATATACTTGTATATATTTAT
TTTTGCTATATTGAATGGAAAAGTTATTTTTGGATAAAAAGTGAAAAGAA
ATCTCTTGAATCAAATAAATCCTACTTCAATAAAAGAACCAAATCACCAA
ATCAACACCTCAGGTTACAGGCATTTTTTGGTCCAAACCCAAATATTAAT
GATATCATTAAAGCCAATCTAAAGCCATTCATTTTCATTTTAAAAAATCC
TCCAGTTTTCGGCTACGACTGTAATGAACAAATGCTGTGAAGATTAGATA
AAGGGATATGAATATAGGGACCATCAGCCAATNAAACGAATGCTGTGAAG
ATTAGATAAAGGGATATGAATATAGGGACCATCAGCCAATTCAGCGTATT
AGAATGGAAAATCAGTGTTCGACGTTATCACTGGTGGAAGCAACGTTATG
ATTTGGAACTTTAAAAAAGTGTCAAATCTTTTTCATCACCAAGGTACATG
TCCCATATTGCATGGACTAGTACTTAAG

Coding sequence (CDS) from alignment at scaffold_333:340241..348768-

>TCONS_00060055 ID=TCONS_00060055|Name=TCONS_00060055|organism=Clytia hemisphaerica|type=CDS|length=3810bp|location=Sequence derived from alignment at scaffold_333:340241..348768- (Clytia hemisphaerica)
AGCCAAACATAAAGACTGTCTTATTGCATGTGATCAAATCGAAATGAATG
AAGTCAAATTCGAAAGACAACGTGAAAGAAAATACAAAGGGCCTGAAGCT
TTGAGATACCTTCAAGAGTAAGTGATGAATGCAAAAAATCGATTCTAGAG
AAAGTGGACAATATCAAGAAAATGCATGCTGCAATGCTTCAGATGGAACC
AAAACTACGTGAAATGGTAACTCGAATGCGATGTGCAGAAGTTACCGTCC
TTGAGCTTGAAAAGAAGATCACAAGTAAAGAGAATGAAATCAGGTACCGT
GAAAAGATGAAAGAGCTAAAAGATAAACTTTCCTACCGAATTGCAAGAGC
AAGACGCACTGGAACGTAAAGAATATAAACTAGGCCAGTTAGAACAACGT
TTAAAGACTGTTGAATATCGTATGGATGCAATCAAACAAAGCATGAGGTC
AAGGAACAATGCTAACGGAGATATCGGCAGAGAAGAACAAAAGTTGAATG
ACACGTTAAAAAAACAATCGGAGTTGCAAGCAAACATGATCAGGAATATG
AGACGAAGAGATACGATTGAGAAACAGATTCTCGCCTTCCAAGAGAAAGA
ATCGAAATGAGTTTTTCAAATGCGCAAGCAAACATGGAATCACGAATTGC
AGGATTCGAAAAGAAGGAGAAACAATGCATCGCCAGAAAAGAGAAAGCCG
TGGAAAGAATTAACACAGCACGAGAAAAGCTCAGATTCATGAAAGAAGTT
CGGGCTGAAAGGAGCCAAACATAAAGACTGTCTTATTGCATGTGATCAAA
TCGAAATGAATGAAGTCAAATTCGAAAGACAACGTGAAAGAAAATACAAA
GGGCCTGAAGCTTTGAGATACCTTCAAGAGTAAGTGATGAATGCAAAAAA
TCGATTCTAGAGAAAGTGGACAATATCAAGAAAATGCATGCTGCAATGCT
TCAGATGGAACCAAAACTACGTGAAATGGTAACTCGAATGCGATGTGCAG
AAGTTACCGTCCTTGAGCTTGAAAAGAAGATCACAAGTAAAGAGAATGAA
ATCAGGTACCGTGAAAAGATGAAAGAGCTAAAAGATAAACTTTCCTACCG
AATTGCAAGAGCAAGACGCACTGGAACGTAAAGAATATAAACTAGGCCAG
TTAGAACAACGTTTAAAGACTGTTGAATATCGTATGGATGCAATCAAACA
AAGCATGAGGTCAAGGAACAATGCTAACGGAGATATCGGCAGAGAAGAAC
AAAAGTTGAATGACACGTTAAAAAAACAATCGGAGTTGCAAGCAAACATG
ATCAGGAATATGAGACGAAGAGATACGATTGAGAAACAGATTCTCGCCTT
CCAAGAGAAAGAATCGAAATGAGTTTTTCAAATGCGCAAGCAAACATGGA
ATCACGAATTGCAGGATTCGAAAAGAAGGAGAAACAATGCATCGCCAGAA
AAGAGAAAGCCGTGGAAAGAATTAACACAGCACGAGAAAAGCTCAGATTC
ATGAAAGAAGTTCGGGCTGAAAGGAGCCAAACATAAAGACTGTCTTATTG
CATGTGATCAAATCGAAATGAATGAAGTCAAATTCGAAAGACAACGTGAA
AGAAAATACAAAGGGCCTGAAGCTTTGAGATACCTTCAAGAGTAAGTGAT
GAATGCAAAAAATCGATTCTAGAGAAAGTGGACAATATCAAGAAAATGCA
TGCTGCAATGCTTCAGATGGAACCAAAACTACGTGAAATGGTAACTCGAA
TGCGATGTGCAGAAGTTACCGTCCTTGAGCTTGAAAAGAAGATCACAAGT
AAAGAGAATGAAATCAGGTACCGTGAAAAGATGAAAGAGCTAAAAGATAA
ACTTTCCTACCGAATTGCAAGAGCAAGACGCACTGGAACGTAAAGAATAT
AAACTAGGCCAGTTAGAACAACGTTTAAAGACTGTTGAATATCGTATGGA
TGCAATCAAACAAAGCATGAGGTCAAGGAACAATGCTAACGGAGATATCG
GCAGAGAAGAACAAAAGTTGAATGACACGTTAAAAAAACAATCGGAGTTG
CAAGCAAACATGATCAGGAATATGAGACGAAGAGATACGATTGAGAAACA
GATTCTCGCCTTCCAAGAGAAAGAATCGAAATGAGTTTTTCAAATGCGCA
AGCAAACATGGAATCACGAATTGCAGGATTCGAAAAGAAGGAGAAACAAT
GCATCGCCAGAAAAGAGAAAGCCGTGGAAAGAATTAACACAGCACGAGAA
AAGCTCAGATTCATGAAAGAAGTTCGGGCTGAAAGGAGCCAAACATAAAG
ACTGTCTTATTGCATGTGATCAAATCGAAATGAATGAAGTCAAATTCGAA
AGACAACGTGAAAGAAAATACAAAGGGCCTGAAGCTTTGAGATACCTTCA
AGAGTAAGTGATGAATGCAAAAAATCGATTCTAGAGAAAGTGGACAATAT
CAAGAAAATGCATGCTGCAATGCTTCAGATGGAACCAAAACTACGTGAAA
TGGTAACTCGAATGCGATGTGCAGAAGTTACCGTCCTTGAGCTTGAAAAG
AAGATCACAAGTAAAGAGAATGAAATCAGGTACCGTGAAAAGATGAAAGA
GCTAAAAGATAAACTTTCCTACCGAATTGCAAGAGCAAGACGCACTGGAA
CGTAAAGAATATAAACTAGGCCAGTTAGAACAACGTTTAAAGACTGTTGA
ATATCGTATGGATGCAATCAAACAAAGCATGAGGTCAAGGAACAATGCTA
ACGGAGATATCGGCAGAGAAGAACAAAAGTTGAATGACACGTTAAAAAAA
CAATCGGAGTTGCAAGCAAACATGATCAGGAATATGAGACGAAGAGATAC
GATTGAGAAACAGATTCTCGCCTTCCAAGAGAAAGAATCGAAATGAGTTT
TTCAAATGCGCAAGCAAACATGGAATCACGAATTGCAGGATTCGAAAAGA
AGGAGAAACAATGCATCGCCAGAAAAGAGAAAGCCGTGGAAAGAATTAAC
ACAGCACGAGAAAAGCTCAGATTCATGAAAGAAGTTCGGGCTGAAAGGAG
CCAAACATAAAGACTGTCTTATTGCATGTGATCAAATCGAAATGAATGAA
GTCAAATTCGAAAGACAACGTGAAAGAAAATACAAAGGGCCTGAAGCTTT
GAGATACCTTCAAGAGTAAGTGATGAATGCAAAAAATCGATTCTAGAGAA
AGTGGACAATATCAAGAAAATGCATGCTGCAATGCTTCAGATGGAACCAA
AACTACGTGAAATGGTAACTCGAATGCGATGTGCAGAAGTTACCGTCCTT
GAGCTTGAAAAGAAGATCACAAGTAAAGAGAATGAAATCAGGTACCGTGA
AAAGATGAAAGAGCTAAAAGATAAACTTTCCTACCGAATTGCAAGAGCAA
GACGCACTGGAACGTAAAGAATATAAACTAGGCCAGTTAGAACAACGTTT
AAAGACTGTTGAATATCGTATGGATGCAATCAAACAAAGCATGAGGTCAA
GGAACAATGCTAACGGAGATATCGGCAGAGAAGAACAAAAGTTGAATGAC
ACGTTAAAAAAACAATCGGAGTTGCAAGCAAACATGATCAGGAATATGAG
ACGAAGAGATACGATTGAGAAACAGATTCTCGCCTTCCAAGAGAAAGAAT
CGAAATGAGTTTTTCAAATGCGCAAGCAAACATGGAATCACGAATTGCAG
GATTCGAAAAGAAGGAGAAACAATGCATCGCCAGAAAAGAGAAAGCCGTG
GAAAGAATTAACACAGCACGAGAAAAGCTCAGATTCATGAAAGAAGTTCG
GGCTGAAAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037776XLOC_037776Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060055-exon-scaffold_333-1575043694:348203..348768TCONS_00060055-exon-scaffold_333-1575043694:348203..348768Clytia hemisphaericaexon
TCONS_00060055-exon-scaffold_333-1575043694:347292..347548TCONS_00060055-exon-scaffold_333-1575043694:347292..347548Clytia hemisphaericaexon
TCONS_00060055-exon-scaffold_333-1575043694:346867..346922TCONS_00060055-exon-scaffold_333-1575043694:346867..346922Clytia hemisphaericaexon
TCONS_00060055-exon-scaffold_333-1575043694:345383..345554TCONS_00060055-exon-scaffold_333-1575043694:345383..345554Clytia hemisphaericaexon
TCONS_00060055-exon-scaffold_333-1575043694:340241..341066TCONS_00060055-exon-scaffold_333-1575043694:340241..341066Clytia hemisphaericaexon
TCONS_00060055-exon-scaffold_333-1510915933:348203..348768TCONS_00060055-exon-scaffold_333-1510915933:348203..348768Clytia hemisphaericaexon
TCONS_00060055-exon-scaffold_333-1510915933:347292..347548TCONS_00060055-exon-scaffold_333-1510915933:347292..347548Clytia hemisphaericaexon
TCONS_00060055-exon-scaffold_333-1510915933:346867..346922TCONS_00060055-exon-scaffold_333-1510915933:346867..346922Clytia hemisphaericaexon
TCONS_00060055-exon-scaffold_333-1510915933:345383..345554TCONS_00060055-exon-scaffold_333-1510915933:345383..345554Clytia hemisphaericaexon
TCONS_00060055-exon-scaffold_333-1510915933:340241..341066TCONS_00060055-exon-scaffold_333-1510915933:340241..341066Clytia hemisphaericaexon
TCONS_00060055-exon-scaffold_333-1491911889:348203..348768TCONS_00060055-exon-scaffold_333-1491911889:348203..348768Clytia hemisphaericaexon
TCONS_00060055-exon-scaffold_333-1491911889:347292..347548TCONS_00060055-exon-scaffold_333-1491911889:347292..347548Clytia hemisphaericaexon
TCONS_00060055-exon-scaffold_333-1491911889:346867..346922TCONS_00060055-exon-scaffold_333-1491911889:346867..346922Clytia hemisphaericaexon
TCONS_00060055-exon-scaffold_333-1491911889:345383..345554TCONS_00060055-exon-scaffold_333-1491911889:345383..345554Clytia hemisphaericaexon
TCONS_00060055-exon-scaffold_333-1491911889:340241..341066TCONS_00060055-exon-scaffold_333-1491911889:340241..341066Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060055-proteinTCONS_00060055-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_333supercontigscaffold_333:340241..348768 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.219867	0.259265	0.080634	0.0415716	0.0143416	0.0226659	0.0410182	0.0640012	0.430928	0.32935	0.334009	0.54537	0.515197	0.448061	0.464356	0.311067	59.0327	89.9872	0.271321	0.239101	51.3603	48.1174	18.4593	19.2671	23.0216	28.5284	0.131242	0.0622511	0.271488	0.180393
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060055 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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