TCONS_00060007 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060007
Unique NameTCONS_00060007
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1884

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060007 ID=TCONS_00060007|Name=TCONS_00060007|organism=Clytia hemisphaerica|type=transcript|length=1884bp
ACCGAACGACATGACAACCGTAATCTTTTTGCCGTCCAAAACACTTTCTT
TTTTGCTTTACGCGAAGCCACAGCCAAAAGTCACCCACCAAAAAATCTAT
AAATTAAAACTGTTACCAAGATGATTGCAAATACTTTACGAAGACAAGTT
TCTAAATCCGTTAGACAATTATCCACCTCATCCCAAAACAATGTGAAAGT
AGCAGTGCTTGGTGCCAGCGGTGGTATCGGTCAACCTTTGGCTTTGCTGT
TAAAGCATTCTCCAATGGTCAGTCACTTGGCTCTTTACGATCTTGCTCCT
TTCACTCCagGAGTTGGATGTGATCTTTCACACATTGAAACCATTGGAAA
AGTCACCGCACATATGGGACCAGAGAATCTTGATGAATGTGTCAAAGACT
GTTCATTGGTCCTCATCCCTGCTGGTATGCCGAGAAAACCAGGAATGACT
CGGGATGATTTATTCAATACTAACGCTTCCATTGCAATGAACTTGGCTGA
TGCTTGTGCACGAAACTGTCCAGAAGCTGTACTTGGCATCATCACAAACC
CAGTCAACTCCACCGTCCCAATCGCTGctgaagttttcaaaaaacacGGT
GTCTACAACCCATCTAAAATTCTTGGAGTCACCACCCTCGATGTTGTCCG
TGCTAACACCTTCGTTGCTGAGCTCAAAGGTTTAGATGTCTCCAAAACTA
ACGTTCCCGTGATCGGAGGACATTCTGGCGTCACCATCTTACCTTTGTTG
TCACAGGTCGTCCCTAAAGTTTCCTTCACCGATGATGAGATCGCTGCAAT
GACCACTCGCATTCAAAACGCAGGAACTGAAGTCGTCGAAGCTAAAGCTG
GAGCTGGATCAGCCACTTTATCGATGGCATACGCTGGCGCTCGTTTCGGT
TTCTCCATCTTGGAAGCCATGAACGGCAAGAAAGGAGTTGTCGAATGTTG
TTATCGTGAATCAAGCATCACTGAAGCGTCATACTTCGCTACACCTATGC
TTCTTGGCCCTGGAGGAGCAGAAAAAGATTTGGGTATCGGAGATATGACC
GATTTCGAGAAAGAAAAACTCGATGAGCTGATGCCAGAACTCAAATCAAA
CATCGCGAAGGGTGAGAAATTCGCCGCTGACAACATGTGAGCAAACACCT
CACGCGCATGCGCACTGAACACCGACCACGCCTACCTCATGCAAAGAATA
TACTTATGATTTTTGTACAACACacaatatatataatataataactGAAA
GAACTGTTCTGTTTATGTCGACTAGAAAATGCAAGATTTTGACCTTgatt
ttatttcagtttttggattttgatacttttgacctaaataccgggtgtcc
cagaaaaaagtctcCCTCAGAAAAAAGTCtccctctttgaagtgaatttt
ctcgagttctatgaacttTGAAAGCATCAatccttttgcattggaaaaag
gaagtttctgcgtagctagcccctgtatctataaggctggaacaccggat
tcttccagtcgtttatacaaactaaatcccgtattattattattattatt
aGTATTGGTATTATTAGTATTACACGCATTATAAACGACTCCAGTCTAGA
ATTTAGacgataacttttgatctaattgacaaatgacccctcaaaattta
agtttatcctcctctttccaatgcaaaagaaTTGATTCTTTAACGgttca
tagaactcgagaaaattcacttcaaagagagGGACTTTTTTCTGGTACAC
CCGGTATTTATTTTATAAACCCTGTCTAGAAAAATCTTTTGCCTGAATTT
GCTGCTGTACACTTTGGTCAGTGAGGAAGTACCTTCTCTCGATAAGGTTT
GTGAGAAGAAAACATTATAAGCGACACTAaggac
Run BLAST on NCBI

protein sequence of TCONS_00060007-protein

>TCONS_00060007-protein ID=TCONS_00060007-protein|Name=TCONS_00060007-protein|organism=Clytia hemisphaerica|type=polypeptide|length=339bp
MIANTLRRQVSKSVRQLSTSSQNNVKVAVLGASGGIGQPLALLLKHSPMV
SHLALYDLAPFTPGVGCDLSHIETIGKVTAHMGPENLDECVKDCSLVLIP
AGMPRKPGMTRDDLFNTNASIAMNLADACARNCPEAVLGIITNPVNSTVP
IAAEVFKKHGVYNPSKILGVTTLDVVRANTFVAELKGLDVSKTNVPVIGG
HSGVTILPLLSQVVPKVSFTDDEIAAMTTRIQNAGTEVVEAKAGAGSATL
SMAYAGARFGFSILEAMNGKKGVVECCYRESSITEASYFATPMLLGPGGA
EKDLGIGDMTDFEKEKLDELMPELKSNIAKGEKFAADNM
Run BLAST on NCBI

transcript from alignment at scaffold_333:134427..143427+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060007 ID=TCONS_00060007|Name=TCONS_00060007|organism=Clytia hemisphaerica|type=transcript|length=9001bp|location=Sequence derived from alignment at scaffold_333:134427..143427+ (Clytia hemisphaerica)
ACCGAACGACATGACAACCGTAATCTTTTTGCCGTCCAAAACACTTTCTT
TTTTGCTTTACGCGAAGCCACAGCCAAAAGTCACCCACCAAAAAATCTAT
AAATTAAAACTGTTACCAAGATGATTGCAAATACTTTACGAAGACAAGTT
TCTAAATCCGTTAGACAATTATCCACCTCATCCCAAGTAAGTATTTTTGT
TTTCTGAGATCAGTTTTGATATCTGTTTTTAAGAGTACTTGAAATGGGGA
AATTATATCGCAGCACTTTTAGAGTAGACTCTTAAGAGTCTATTGTTGGA
TTTGGATGGAATGGCCATGGTACTTGTATGGATTTTGACAGCAGGGGTCT
TTCAGACCATCAAAAGGGGTCTTACAGGCACAACAAAAGGGGTCTTACAA
CCTCCACAACAGgggtagggcgtcaacagtcatttttAGGGCAAAGTTAG
TTTTATAATAGATGAACAGTAGTAGCTAGTTtgtttgtgaaaatttaacc
ctttctatcccttattttGATGCCtgcatctctgaaaatttcagacatgt
gagCTCATCAGTTTAAAAGTGAGATCAGGAAACTTGCATACAGTAGCCAT
CAAATGcctgaccaaccaaagcagcaaaatttccaaacaaatGTAATAGT
AGTACAAGAGCAatgcagctccgcttgcagctctactttACCATTTTAGT
ATCTCATATTTGTGCTGCACAAGTATTTTTGTTGAGTAACTCCCTGACAG
AATCGTGGGTATATAAAACAGCGTGGTTgcataataaaaaatcaaacaag
atcataaattttaaaatggcGGGAATTCAGATGTTTCTCAATGGCTGCTG
GACATTAATCTCAAATtcaataccgtgagtggtcctaaatccgacagccc
tgcctaaatccgaccccccaaataactgctatgaaaaaaaattctatgtt
tacaaacattccctctccaagttNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcttttttcttccaaaattc
tGTATACACCACCCCTTTCGGCAGTTAGTACACTGGTGTACTAActgcat
tttgaaaatttgaaaaatggacccaccacggtactaGGACACGATCAATA
ATATGAGACACCATTGTGGACATCATAAAATTGTCCTAAAACTTGTTTTG
TTAAtaagtttctgaattttaattgtcATGGGTCGAAAATTTAATAGAAG
TTAGATATTACTAtgttctttaaatattttttttcaaaaaattaaaaact
tcatttttgacaaagatatgataaaaaattaacattgttaaCTTTTTATC
AATTCANAtaaaaaaagtgcgagttgtaaaaataattacatcTATAATTC
TGAATtcgttgctcgtgtttaaaaacgttaacaattttgtaataaagaaC
TATGTTTTGTttaagaagcaattaatgttttagttcaattggttcagtgt
atcaaatctctcagtttagttgacactttggtatcttcattgcgtcacag
caaaaagtttgtttttattttagtttgtatcNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNAATTTGTAACACTGGTACACTCAGAAAATTACG
AAAATGGTTTGCTGCCCTTGGAACCTAGTAAATTAGATTTTAGACAATTT
CATGAGAAAGTGAATTGATCAGATAGAAATAACGATTGTTGCATGCATTT
TGGACACAAAttaatgataaatttttaacaattttggcaaaaattgaact
taatcttagcaaggaaaaaatataagatatcaaGTTTTGAGTCAATTTGG
GGTAATTTTTAGGTTTCAAATCAGGGTTCCAAAACTTAAATTAGTGAAAC
TAAATTGCAGAAATGTATTTTCAGATAACCAATCTTTAAATCTGACAAGT
TAAAGATATGCGGATGCAACTTTTCAGGATAATAGAATATGAAAATTCAT
AATTCGTAAGTACTCTAGATTTGGAGAAAATGCTGTTATAGTGTTTCACG
TTAGTTCTgtttagtattttgttaatattttatcagtatttttgttaatA
TTGGTGTTTGATTTATTCTAGGGTGTTTTTATGTTCTAGATCAGCTTCTT
GAGCATTTTGAAAGACTTAATTGAGTATCTTTAAGTGGCAAAGACTAATA
AAACTATAACAGAAAGTatattgttaaaatattatcttcTATTGTCTGTT
AACATTTTATCATTTGAATTCTATCTTTTTCTGATTTCACTCcattgata
ctcaagattttgttAATATGCAAACAATTGGTCACTTTTTAACCATTTAT
gtcaattttgataatattttaacacactACTAGTGTAATATTTACAAGTA
CATACTAGTTTTGGTTAAGTTTTTATCTCTTTTTGTTCAAGTTATTCGAA
ATTGTAGTTCTGCGTATAGTTTAAAGAGATATGTATCAAAAACAAGAGTT
ACAATTAAACAAGCTAAATTTTGTCAGTTTCCCacaaatttatgataaaa
atacCAAGTTTTGAACTTCAATCTGTTAAANAGAGTTACAAATAAACAAC
CCAAATTTTGGCAGTTTCCCacaaatttatgataaaaattaccaagtttt
gaacttcaatctgttaaaaaattatcatttcNGAGTTACAATTAAACAAG
CTAAATTTTGTCAGTTTCCCacaaatttatgataaaaataccaagttttg
aacttcaatctgttaaaaaattatcatttcattgtttttgagccTGAAAC
CtgtcaaatttgataaaaaattatcatattTTTGGTCTGTCCAAANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTGTCAATATTCACTATGttcaaataattgataaaagtttaa
cacaTGGTATCAATGTCCACAAGTAGGCCAAAATTGGTCTCATATTATTG
ATCGTGTCCACTAAGTGTCATGGGTGtcgtgtactaactgcttgccccCA
CCCCCCCCTGACGGTAATGATCTTTAAAACATAATTTATGCATGACACCA
CTTTGgatgaaaaaatgagtaaattttgtGAATCAGATTTGTTTCGATTT
AACTTTGTCTTTTAATACCCAGCCAGGTCATTTGAGGGCGTATGAATTCC
ACTAAATCTCCCGCAGAAGAAATTTTTCCgtacagcaagcctcacgccaa
gcaaaatttcttttgtaccaacattcaatttttcaataagggtgcaagat
gggaaaagaggcgaATGCGgcaacataattaataaattgatgCGAACGTA
AGCGAGtaaaagcaaatttagccaaatgaaagcttaaaatcgatggatta
tggagtcattcacgtcgagctggaattattactttacgccaactgaaaat
gaaacaatctttgtaagtacccttacgccaatgcgccaaaaacgtttcag
ttgtatGCCGAAGATCTTTggcgttagttacacgaaatccatactggcat
gttagcctccactgatgcaagctaCCCAATCTCATGGTTATTGACTTGCT
AAATTGTCCCTAAAAAGTGTCTAGGCTATCCAAAATTGGCTTGAAACGGC
TAGGCTGGGGCTCAAACAGGTTCAATTTTCAACCAAAtgagattaatttt
tgtttcttcataaaatcaTAGAAtacaagaaattaaaaaatttgtaataa
ttttgccatatttacaaaatgccattttttctaatttttgcctgCATAGT
ATAATTAGTACCCCCAAGGGtaagccaattttggacttATGACCTAATAA
ATTGTTTAGAAGGCCTTCCAATGGATTAAATTTCTACAAAAAACACTACA
tcctgaattttctgacttagcATTTGAGGCTCCACAGACCCTAACAAAAG
GTCAGGGGTCTAGGTCAGGGGTCTACCTTTATATATAAGATCGATTCCAT
GTGACATCATTTTCACCCAAAATtagccatttttctaagaaatggtAGAA
AGATTTCAGCAACAGGGTCTTCTTGCACATATTGATGACAGGGATCAGgc
acttaaaattggttaagATAGGCATGATTACAAGAAGATCTTACAGGAAC
ATAATTGTGACCCATCCGAGACCAGATGGATCAATTAAATGGACTTGAAG
CAGCCTTGGGTCAGTTcagtcaatcaaaagttatgttaaaAAAATGGAAT
CTTGACAAacccaaaataaaaagaaattctcTGATAAACAGCTAAAACGT
AGAGAAAACcacttaaaatttgagaaaatctcTCAAAAATGCCACCATAT
CGAACGTCATCAGTTTAGTTTTATGCTTTGTTTGGATTGTTTTATATGAA
ATGGTATTTTGAGTATCTAGGAAAATCACGAAAACATTTccccaaaacaa
aaaaatcttatcTTAATTAAATTATCTTTGATAATAGTGTTTCctcattc
aaattttgatcactgttttaaattaattttggtatttttgggTTCTTCAG
TATAACTTTTGACTGACTCAGCCGATTTAAGAGATACCAAAATTTGAGTC
AGGCCTTCCTTTATACAATAGAAGAAGAATCAATAGAACATTTTTATCCG
TAACCTTGCAATATCTTGACAAACCGGTATACTCCTTTGGCAAACCCAGT
AGTAGCAAATTATTTAtggtagaaaaaaatgacaagcaaGAGATTCTTAA
AAATATAGATCAATGATGACTCATGGAATAGTATCTGATCTTTTGTAGAA
CAATGTGAAAGTAGCAGTGCTTGGTGCCAGCGGTGGTATCGGTCAACCTT
TGGCTTTGCTGTTAAAGCATTCTCCAATGGTCAGTCACTTGGCTCTTTAC
GATCTTGCTCCTTTCACTCCaggtaatttttcttttgaaattttgaaata
tctttttaacaaatCATAATCTTAGCTCTTTGTTAATTACATCTCTAAAT
ATTGAAGTATAAGATTTtggcaacattttttcaaatatatgtTTTAGAGT
TGTGCACTATCAACTTTATTCTATTTCTTAGATCTGGTGGTCTATGATGA
AAATCTCTCGGCTGAACTAGCAAGCTgggttttatgtttttatttatata
aaaaatatttatagttTTATGTTAGACAGGTGTCTTGCGATGGTTTAAAT
AACTCGTCCTTATTCTGAGACCACATTACATTAATATGAGAGGAAATGGG
AGAAAAGTAAATGCTCTCTAAAACGTTTTAGCTACAAAGTTATAATATAA
GATATTATTATCTACAATGCATTCCACGCCTTCTGCATTTTTAGGAGTTG
GATGTGATCTTTCACACATTGAAACCATTGGAAAAGTCACCGCACATATG
GGACCAGAGAATCTTGATGAATGTGTCAAAGACTGTTCATTGGTCCTCAT
CCCTGCTGGTATGCCGAGAAAACCAGGTGGGTAGTATGTTCTAATCTTAC
CTTCTTATGTCCAAAAAGGAAATCAGCTCTTACACTTTATTATAAAGACC
CTGAGTGGTGACTTGTCTGGCTAGTTGTTTAAAAGttgtaacaagttgta
acacCAAGTCTCAAGCTTTTTCTTTTACTTCATTCAGGAATGACTCGGGA
TGATTTATTCAATACTAACGCTTCCATTGCAATGAACTTGGCTGATGCTT
GTGCACGGTAATCGCGTTtttaaatttatgaaaatatttatctcAGGGca
agtttagtttagtttttcctaattttgataaattgtAAATACTTTTCTTA
ATGCAAATGATGGAAAGAGAATTTAATATCATTTTAacattcaaagaaaa
acaacaatgttttaaaattgagcaaaagcttttcgatttgttaacatcat
ttgtagcactgaagatgatttttaatcgaaaagcttttgctcaattttaa
aacattgttgtttttctttaaatttatttttggaatggcaaaatttcaaa
gaaaattttaacattCTTTATTATCATATTAAATTACAGAAACTGTCCAG
AAGCTGTACTTGGCATCATCACAAACCCAGTCAACTCCACCGTCCCAATC
GCTGctgaagttttcaaaaaacacGGTGTCTACAACCCATCTAAGTAAGA
AATCATTTCAAGTATGTCTAAAGTGACAGTTAAATAGTTGGTGACTTATT
TCATGCGACTAGTAAGGGCAAAACTTTGATCCAGCACAATTAATTCTTTT
AGTATTTGAAGGGTAACTTTATTGGGATTCTTTTGTGATTATTAGATTCA
GAATGCCGCTGATAACTCTTCGGACATTTTTGcaacaatattttctttta
cgTAGAATTCTTGGAGTCACCACCCTCGATGTTGTCCGTGCTAACACCTT
CGTTGCTGAGCTCAAAGGTTTAGATGTCTCCAAAACTAACGTTCCCGTGA
TCGGAGGACATTCTGGCGTCACCATCTTACCTTTGTTGTCACAGGTCGTC
CCTAAAGTTTCCTTCACCGATGATGAGATCGCTGCAATGACCACTCGCAT
TCAAAACGCAGGAACTGAAGTCGTCGAAGCTAAAGCTGGAGCTGTAAGCT
TTTTATTTCATTAGTCTCCATCTATCActaagaaatcattttcaccatgG
CATCTAGTGGCAACGTTTTTNTTTTCATTTCATTAGTCTACATCTATCAC
TAAGAAATCATGTTCGCCAATGACATCTTGCTCAACGTTTTGTAACCTTT
TAGCAAACGTTTGAGTTGTGATGAAATTACAAAATTCAAAGTTTCAATAG
AAGTTTGACGACAATGAAAAAGAAGTGACTTTTCTTTATATCTTtggaaa
taatcaaaattattgCATTATTTTTCACCGTTTAACACATCTTTATcatg
aataaaatgaaaatgaaagtttttacAGTGAATAAATTTCTCGACTTAGG
GATCAGCCACTTTATCGATGGCATACGCTGGCGCTCGTTTCGGTTTCTCC
ATCTTGGAAGCCATGAACGGCAAGAAAGGAGTTGTCGAATGTTGTTATCG
TGAATCAAGCATCACTGAAGCGTCATACTTCGCTACACCTATGCTTCTTG
GCGTAAGTATATATCTTATCTTTATAATTTGAATACTTCTACTTGAGATC
CTTCAAATCATTACAGGCAAAGATAATTTAACATTATTTAGCACAATGAT
TTTTAATCCGTGGTGAATATATGGTGGATATTTCCGTTTTTGGGTAAGTT
ACGAAACTTGCGCTATTAGAGaagaaaacgttcgaatttgaaGAGGTGAT
ATGCAATATGCCTAGTTCCAAAATCACGGAACTTCGtagaaaacataaaa
aacctAAATGAAGGCCTGTGGTACTTGCATTATTCATGTTTTCTCTAATT
CTCTTTTAGCCTGGAGGAGCAGAAAAAGATTTGGGTATCGGAGATATGAC
CGATTTCGAGAAAGAAAAACTCGATGAGGTATGTATAATTTAGTTTGATG
TTAAGTCTTTAAATTAtaaatatctgaaaatgaaaatagtaaATCAAAGT
CGTTTAACTTTCTGAGTTTAGTAATTGTGAAACTTCTTTCAGTAATATAG
GTATTCGATTCTCAAAATTAAGTCTCAAAATAAAAGACGTCTTAAATTCa
tcaatgtcttccacggacccaacagctgtttggttgaaagtaacgcattg
actgattttacgtcacttacaaccaatcagcttaTGGATCCGTGAtctaa
tgtcagaagacattgcaatgttgcatatcatgaatatggaAACTATTTTT
ATTTGGCTTTTGTTAATTGTCATGTCTTCTTTTGTTACTTTTAGCTGATG
CCAGAACTCAAATCAAACATCGCGAAGGGTGAGAAATTCGCCGCTGACAA
CATGTGAGCAAACACCTCACGCGCATGCGCACTGAACACCGACCACGCCT
ACCTCATGCAAAGAATATACTTATGATTTTTGTACAACACacaatatata
taatataataactGAAAGAACTGTTCTGTTTATGTCGACTAGAAAATGCA
AGATTTTGACCTTgattttatttcagtttttggattttgatacttttgac
ctaaataccgggtgtcccagaaaaaagtctcCCTCAGAAAAAAGTCtccc
tctttgaagtgaattttctcgagttctatgaacttTGAAAGCATCAatcc
ttttgcattggaaaaaggaagtttctgcgtagctagcccctgtatctata
aggctggaacaccggattcttccagtcgtttatacaaactaaatcccgta
ttattattattattattaGTATTGGTATTATTAGTATTACACGCATTATA
AACGACTCCAGTCTAGAATTTAGacgataacttttgatctaattgacaaa
tgacccctcaaaatttaagtttatcctcctctttccaatgcaaaagaaTT
GATTCTTTAACGgttcatagaactcgagaaaattcacttcaaagagagGG
ACTTTTTTCTGGTACACCCGGTATTTATTTTATAAACCCTGTCTAGAAAA
ATCTTTTGCCTGAATTTGCTGCTGTACACTTTGGTCAGTGAGGAAGTACC
TTCTCTCGATAAGGTTTGTGAGAAGAAAACATTATAAGCGACACTAagga
c

Coding sequence (CDS) from alignment at scaffold_333:134427..143427+

>TCONS_00060007 ID=TCONS_00060007|Name=TCONS_00060007|organism=Clytia hemisphaerica|type=CDS|length=9180bp|location=Sequence derived from alignment at scaffold_333:134427..143427+ (Clytia hemisphaerica)
ATGATTGCAAATACTTTACGAAGACAAGTTTCTAAATCCGTTAGACAATT
ATCCACCTCATCCCAAAACAATGTGAAAGTAGCAGTGCTTGGTGCCAGCG
GTGGTATCGGTCAACCTTTGGCTTTGCTGTTAAAGCATTCTCCAATGGTC
AGTCACTTGGCTCTTTACGATCTTGCTCCTTTCACTCCagGAGTTGGATG
TGATCTTTCACACATTGAAACCATTGGAAAAGTCACCGCACATATGGGAC
CAGAGAATCTTGATGAATGTGTCAAAGACTGTTCATTGGTCCTCATCCCT
GCTGGTATGCCGAGAAAACCAGGAATGACTCGGGATGATTTATTCAATAC
TAACGCTTCCATTGCAATGAACTTGGCTGATGCTTGTGCACGAAACTGTC
CAGAAGCTGTACTTGGCATCATCACAAACCCAGTCAACTCCACCGTCCCA
ATCGCTGctgaagttttcaaaaaacacGGTGTCTACAACCCATCTAAAAT
TCTTGGAGTCACCACCCTCGATGTTGTCCGTGCTAACACCTTCGTTGCTG
AGCTCAAAGGTTTAGATGTCTCCAAAACTAACGTTCCCGTGATCGGAGGA
CATTCTGGCGTCACCATCTTACCTTTGTTGTCACAGGTCGTCCCTAAAGT
TTCCTTCACCGATGATGAGATCGCTGCAATGACCACTCGCATTCAAAACG
CAGGAACTGAAGTCGTCGAAGCTAAAGCTGGAGCTGGATCAGCCACTTTA
TCGATGGCATACGCTGGCGCTCGTTTCGGTTTCTCCATCTTGGAAGCCAT
GAACGGCAAGAAAGGAGTTGTCGAATGTTGTTATCGTGAATCAAGCATCA
CTGAAGCGTCATACTTCGCTACACCTATGCTTCTTGGCCCTGGAGGAGCA
GAAAAAGATTTGGGTATCGGAGATATGACCGATTTCGAGAAAGAAAAACT
CGATGAGCTGATGCCAGAACTCAAATCAAACATCGCGAAGGGTGAGAAAT
TCGCCGCTGACAACATGTGAATGATTGCAAATACTTTACGAAGACAAGTT
TCTAAATCCGTTAGACAATTATCCACCTCATCCCAAAACAATGTGAAAGT
AGCAGTGCTTGGTGCCAGCGGTGGTATCGGTCAACCTTTGGCTTTGCTGT
TAAAGCATTCTCCAATGGTCAGTCACTTGGCTCTTTACGATCTTGCTCCT
TTCACTCCagGAGTTGGATGTGATCTTTCACACATTGAAACCATTGGAAA
AGTCACCGCACATATGGGACCAGAGAATCTTGATGAATGTGTCAAAGACT
GTTCATTGGTCCTCATCCCTGCTGGTATGCCGAGAAAACCAGGAATGACT
CGGGATGATTTATTCAATACTAACGCTTCCATTGCAATGAACTTGGCTGA
TGCTTGTGCACGAAACTGTCCAGAAGCTGTACTTGGCATCATCACAAACC
CAGTCAACTCCACCGTCCCAATCGCTGctgaagttttcaaaaaacacGGT
GTCTACAACCCATCTAAAATTCTTGGAGTCACCACCCTCGATGTTGTCCG
TGCTAACACCTTCGTTGCTGAGCTCAAAGGTTTAGATGTCTCCAAAACTA
ACGTTCCCGTGATCGGAGGACATTCTGGCGTCACCATCTTACCTTTGTTG
TCACAGGTCGTCCCTAAAGTTTCCTTCACCGATGATGAGATCGCTGCAAT
GACCACTCGCATTCAAAACGCAGGAACTGAAGTCGTCGAAGCTAAAGCTG
GAGCTGGATCAGCCACTTTATCGATGGCATACGCTGGCGCTCGTTTCGGT
TTCTCCATCTTGGAAGCCATGAACGGCAAGAAAGGAGTTGTCGAATGTTG
TTATCGTGAATCAAGCATCACTGAAGCGTCATACTTCGCTACACCTATGC
TTCTTGGCCCTGGAGGAGCAGAAAAAGATTTGGGTATCGGAGATATGACC
GATTTCGAGAAAGAAAAACTCGATGAGCTGATGCCAGAACTCAAATCAAA
CATCGCGAAGGGTGAGAAATTCGCCGCTGACAACATGTGAATGATTGCAA
ATACTTTACGAAGACAAGTTTCTAAATCCGTTAGACAATTATCCACCTCA
TCCCAAAACAATGTGAAAGTAGCAGTGCTTGGTGCCAGCGGTGGTATCGG
TCAACCTTTGGCTTTGCTGTTAAAGCATTCTCCAATGGTCAGTCACTTGG
CTCTTTACGATCTTGCTCCTTTCACTCCagGAGTTGGATGTGATCTTTCA
CACATTGAAACCATTGGAAAAGTCACCGCACATATGGGACCAGAGAATCT
TGATGAATGTGTCAAAGACTGTTCATTGGTCCTCATCCCTGCTGGTATGC
CGAGAAAACCAGGAATGACTCGGGATGATTTATTCAATACTAACGCTTCC
ATTGCAATGAACTTGGCTGATGCTTGTGCACGAAACTGTCCAGAAGCTGT
ACTTGGCATCATCACAAACCCAGTCAACTCCACCGTCCCAATCGCTGctg
aagttttcaaaaaacacGGTGTCTACAACCCATCTAAAATTCTTGGAGTC
ACCACCCTCGATGTTGTCCGTGCTAACACCTTCGTTGCTGAGCTCAAAGG
TTTAGATGTCTCCAAAACTAACGTTCCCGTGATCGGAGGACATTCTGGCG
TCACCATCTTACCTTTGTTGTCACAGGTCGTCCCTAAAGTTTCCTTCACC
GATGATGAGATCGCTGCAATGACCACTCGCATTCAAAACGCAGGAACTGA
AGTCGTCGAAGCTAAAGCTGGAGCTGGATCAGCCACTTTATCGATGGCAT
ACGCTGGCGCTCGTTTCGGTTTCTCCATCTTGGAAGCCATGAACGGCAAG
AAAGGAGTTGTCGAATGTTGTTATCGTGAATCAAGCATCACTGAAGCGTC
ATACTTCGCTACACCTATGCTTCTTGGCCCTGGAGGAGCAGAAAAAGATT
TGGGTATCGGAGATATGACCGATTTCGAGAAAGAAAAACTCGATGAGCTG
ATGCCAGAACTCAAATCAAACATCGCGAAGGGTGAGAAATTCGCCGCTGA
CAACATGTGAATGATTGCAAATACTTTACGAAGACAAGTTTCTAAATCCG
TTAGACAATTATCCACCTCATCCCAAAACAATGTGAAAGTAGCAGTGCTT
GGTGCCAGCGGTGGTATCGGTCAACCTTTGGCTTTGCTGTTAAAGCATTC
TCCAATGGTCAGTCACTTGGCTCTTTACGATCTTGCTCCTTTCACTCCag
GAGTTGGATGTGATCTTTCACACATTGAAACCATTGGAAAAGTCACCGCA
CATATGGGACCAGAGAATCTTGATGAATGTGTCAAAGACTGTTCATTGGT
CCTCATCCCTGCTGGTATGCCGAGAAAACCAGGAATGACTCGGGATGATT
TATTCAATACTAACGCTTCCATTGCAATGAACTTGGCTGATGCTTGTGCA
CGAAACTGTCCAGAAGCTGTACTTGGCATCATCACAAACCCAGTCAACTC
CACCGTCCCAATCGCTGctgaagttttcaaaaaacacGGTGTCTACAACC
CATCTAAAATTCTTGGAGTCACCACCCTCGATGTTGTCCGTGCTAACACC
TTCGTTGCTGAGCTCAAAGGTTTAGATGTCTCCAAAACTAACGTTCCCGT
GATCGGAGGACATTCTGGCGTCACCATCTTACCTTTGTTGTCACAGGTCG
TCCCTAAAGTTTCCTTCACCGATGATGAGATCGCTGCAATGACCACTCGC
ATTCAAAACGCAGGAACTGAAGTCGTCGAAGCTAAAGCTGGAGCTGGATC
AGCCACTTTATCGATGGCATACGCTGGCGCTCGTTTCGGTTTCTCCATCT
TGGAAGCCATGAACGGCAAGAAAGGAGTTGTCGAATGTTGTTATCGTGAA
TCAAGCATCACTGAAGCGTCATACTTCGCTACACCTATGCTTCTTGGCCC
TGGAGGAGCAGAAAAAGATTTGGGTATCGGAGATATGACCGATTTCGAGA
AAGAAAAACTCGATGAGCTGATGCCAGAACTCAAATCAAACATCGCGAAG
GGTGAGAAATTCGCCGCTGACAACATGTGAATGATTGCAAATACTTTACG
AAGACAAGTTTCTAAATCCGTTAGACAATTATCCACCTCATCCCAAAACA
ATGTGAAAGTAGCAGTGCTTGGTGCCAGCGGTGGTATCGGTCAACCTTTG
GCTTTGCTGTTAAAGCATTCTCCAATGGTCAGTCACTTGGCTCTTTACGA
TCTTGCTCCTTTCACTCCagGAGTTGGATGTGATCTTTCACACATTGAAA
CCATTGGAAAAGTCACCGCACATATGGGACCAGAGAATCTTGATGAATGT
GTCAAAGACTGTTCATTGGTCCTCATCCCTGCTGGTATGCCGAGAAAACC
AGGAATGACTCGGGATGATTTATTCAATACTAACGCTTCCATTGCAATGA
ACTTGGCTGATGCTTGTGCACGAAACTGTCCAGAAGCTGTACTTGGCATC
ATCACAAACCCAGTCAACTCCACCGTCCCAATCGCTGctgaagttttcaa
aaaacacGGTGTCTACAACCCATCTAAAATTCTTGGAGTCACCACCCTCG
ATGTTGTCCGTGCTAACACCTTCGTTGCTGAGCTCAAAGGTTTAGATGTC
TCCAAAACTAACGTTCCCGTGATCGGAGGACATTCTGGCGTCACCATCTT
ACCTTTGTTGTCACAGGTCGTCCCTAAAGTTTCCTTCACCGATGATGAGA
TCGCTGCAATGACCACTCGCATTCAAAACGCAGGAACTGAAGTCGTCGAA
GCTAAAGCTGGAGCTGGATCAGCCACTTTATCGATGGCATACGCTGGCGC
TCGTTTCGGTTTCTCCATCTTGGAAGCCATGAACGGCAAGAAAGGAGTTG
TCGAATGTTGTTATCGTGAATCAAGCATCACTGAAGCGTCATACTTCGCT
ACACCTATGCTTCTTGGCCCTGGAGGAGCAGAAAAAGATTTGGGTATCGG
AGATATGACCGATTTCGAGAAAGAAAAACTCGATGAGCTGATGCCAGAAC
TCAAATCAAACATCGCGAAGGGTGAGAAATTCGCCGCTGACAACATGTGA
ATGATTGCAAATACTTTACGAAGACAAGTTTCTAAATCCGTTAGACAATT
ATCCACCTCATCCCAAAACAATGTGAAAGTAGCAGTGCTTGGTGCCAGCG
GTGGTATCGGTCAACCTTTGGCTTTGCTGTTAAAGCATTCTCCAATGGTC
AGTCACTTGGCTCTTTACGATCTTGCTCCTTTCACTCCagGAGTTGGATG
TGATCTTTCACACATTGAAACCATTGGAAAAGTCACCGCACATATGGGAC
CAGAGAATCTTGATGAATGTGTCAAAGACTGTTCATTGGTCCTCATCCCT
GCTGGTATGCCGAGAAAACCAGGAATGACTCGGGATGATTTATTCAATAC
TAACGCTTCCATTGCAATGAACTTGGCTGATGCTTGTGCACGAAACTGTC
CAGAAGCTGTACTTGGCATCATCACAAACCCAGTCAACTCCACCGTCCCA
ATCGCTGctgaagttttcaaaaaacacGGTGTCTACAACCCATCTAAAAT
TCTTGGAGTCACCACCCTCGATGTTGTCCGTGCTAACACCTTCGTTGCTG
AGCTCAAAGGTTTAGATGTCTCCAAAACTAACGTTCCCGTGATCGGAGGA
CATTCTGGCGTCACCATCTTACCTTTGTTGTCACAGGTCGTCCCTAAAGT
TTCCTTCACCGATGATGAGATCGCTGCAATGACCACTCGCATTCAAAACG
CAGGAACTGAAGTCGTCGAAGCTAAAGCTGGAGCTGGATCAGCCACTTTA
TCGATGGCATACGCTGGCGCTCGTTTCGGTTTCTCCATCTTGGAAGCCAT
GAACGGCAAGAAAGGAGTTGTCGAATGTTGTTATCGTGAATCAAGCATCA
CTGAAGCGTCATACTTCGCTACACCTATGCTTCTTGGCCCTGGAGGAGCA
GAAAAAGATTTGGGTATCGGAGATATGACCGATTTCGAGAAAGAAAAACT
CGATGAGCTGATGCCAGAACTCAAATCAAACATCGCGAAGGGTGAGAAAT
TCGCCGCTGACAACATGTGAATGATTGCAAATACTTTACGAAGACAAGTT
TCTAAATCCGTTAGACAATTATCCACCTCATCCCAAAACAATGTGAAAGT
AGCAGTGCTTGGTGCCAGCGGTGGTATCGGTCAACCTTTGGCTTTGCTGT
TAAAGCATTCTCCAATGGTCAGTCACTTGGCTCTTTACGATCTTGCTCCT
TTCACTCCagGAGTTGGATGTGATCTTTCACACATTGAAACCATTGGAAA
AGTCACCGCACATATGGGACCAGAGAATCTTGATGAATGTGTCAAAGACT
GTTCATTGGTCCTCATCCCTGCTGGTATGCCGAGAAAACCAGGAATGACT
CGGGATGATTTATTCAATACTAACGCTTCCATTGCAATGAACTTGGCTGA
TGCTTGTGCACGAAACTGTCCAGAAGCTGTACTTGGCATCATCACAAACC
CAGTCAACTCCACCGTCCCAATCGCTGctgaagttttcaaaaaacacGGT
GTCTACAACCCATCTAAAATTCTTGGAGTCACCACCCTCGATGTTGTCCG
TGCTAACACCTTCGTTGCTGAGCTCAAAGGTTTAGATGTCTCCAAAACTA
ACGTTCCCGTGATCGGAGGACATTCTGGCGTCACCATCTTACCTTTGTTG
TCACAGGTCGTCCCTAAAGTTTCCTTCACCGATGATGAGATCGCTGCAAT
GACCACTCGCATTCAAAACGCAGGAACTGAAGTCGTCGAAGCTAAAGCTG
GAGCTGGATCAGCCACTTTATCGATGGCATACGCTGGCGCTCGTTTCGGT
TTCTCCATCTTGGAAGCCATGAACGGCAAGAAAGGAGTTGTCGAATGTTG
TTATCGTGAATCAAGCATCACTGAAGCGTCATACTTCGCTACACCTATGC
TTCTTGGCCCTGGAGGAGCAGAAAAAGATTTGGGTATCGGAGATATGACC
GATTTCGAGAAAGAAAAACTCGATGAGCTGATGCCAGAACTCAAATCAAA
CATCGCGAAGGGTGAGAAATTCGCCGCTGACAACATGTGAATGATTGCAA
ATACTTTACGAAGACAAGTTTCTAAATCCGTTAGACAATTATCCACCTCA
TCCCAAAACAATGTGAAAGTAGCAGTGCTTGGTGCCAGCGGTGGTATCGG
TCAACCTTTGGCTTTGCTGTTAAAGCATTCTCCAATGGTCAGTCACTTGG
CTCTTTACGATCTTGCTCCTTTCACTCCagGAGTTGGATGTGATCTTTCA
CACATTGAAACCATTGGAAAAGTCACCGCACATATGGGACCAGAGAATCT
TGATGAATGTGTCAAAGACTGTTCATTGGTCCTCATCCCTGCTGGTATGC
CGAGAAAACCAGGAATGACTCGGGATGATTTATTCAATACTAACGCTTCC
ATTGCAATGAACTTGGCTGATGCTTGTGCACGAAACTGTCCAGAAGCTGT
ACTTGGCATCATCACAAACCCAGTCAACTCCACCGTCCCAATCGCTGctg
aagttttcaaaaaacacGGTGTCTACAACCCATCTAAAATTCTTGGAGTC
ACCACCCTCGATGTTGTCCGTGCTAACACCTTCGTTGCTGAGCTCAAAGG
TTTAGATGTCTCCAAAACTAACGTTCCCGTGATCGGAGGACATTCTGGCG
TCACCATCTTACCTTTGTTGTCACAGGTCGTCCCTAAAGTTTCCTTCACC
GATGATGAGATCGCTGCAATGACCACTCGCATTCAAAACGCAGGAACTGA
AGTCGTCGAAGCTAAAGCTGGAGCTGGATCAGCCACTTTATCGATGGCAT
ACGCTGGCGCTCGTTTCGGTTTCTCCATCTTGGAAGCCATGAACGGCAAG
AAAGGAGTTGTCGAATGTTGTTATCGTGAATCAAGCATCACTGAAGCGTC
ATACTTCGCTACACCTATGCTTCTTGGCCCTGGAGGAGCAGAAAAAGATT
TGGGTATCGGAGATATGACCGATTTCGAGAAAGAAAAACTCGATGAGCTG
ATGCCAGAACTCAAATCAAACATCGCGAAGGGTGAGAAATTCGCCGCTGA
CAACATGTGAATGATTGCAAATACTTTACGAAGACAAGTTTCTAAATCCG
TTAGACAATTATCCACCTCATCCCAAAACAATGTGAAAGTAGCAGTGCTT
GGTGCCAGCGGTGGTATCGGTCAACCTTTGGCTTTGCTGTTAAAGCATTC
TCCAATGGTCAGTCACTTGGCTCTTTACGATCTTGCTCCTTTCACTCCag
GAGTTGGATGTGATCTTTCACACATTGAAACCATTGGAAAAGTCACCGCA
CATATGGGACCAGAGAATCTTGATGAATGTGTCAAAGACTGTTCATTGGT
CCTCATCCCTGCTGGTATGCCGAGAAAACCAGGAATGACTCGGGATGATT
TATTCAATACTAACGCTTCCATTGCAATGAACTTGGCTGATGCTTGTGCA
CGAAACTGTCCAGAAGCTGTACTTGGCATCATCACAAACCCAGTCAACTC
CACCGTCCCAATCGCTGctgaagttttcaaaaaacacGGTGTCTACAACC
CATCTAAAATTCTTGGAGTCACCACCCTCGATGTTGTCCGTGCTAACACC
TTCGTTGCTGAGCTCAAAGGTTTAGATGTCTCCAAAACTAACGTTCCCGT
GATCGGAGGACATTCTGGCGTCACCATCTTACCTTTGTTGTCACAGGTCG
TCCCTAAAGTTTCCTTCACCGATGATGAGATCGCTGCAATGACCACTCGC
ATTCAAAACGCAGGAACTGAAGTCGTCGAAGCTAAAGCTGGAGCTGGATC
AGCCACTTTATCGATGGCATACGCTGGCGCTCGTTTCGGTTTCTCCATCT
TGGAAGCCATGAACGGCAAGAAAGGAGTTGTCGAATGTTGTTATCGTGAA
TCAAGCATCACTGAAGCGTCATACTTCGCTACACCTATGCTTCTTGGCCC
TGGAGGAGCAGAAAAAGATTTGGGTATCGGAGATATGACCGATTTCGAGA
AAGAAAAACTCGATGAGCTGATGCCAGAACTCAAATCAAACATCGCGAAG
GGTGAGAAATTCGCCGCTGACAACATGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037759XLOC_037759Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060007-exon-scaffold_333-1491911889:134427..134612TCONS_00060007-exon-scaffold_333-1491911889:134427..134612Clytia hemisphaericaexon
TCONS_00060007-exon-scaffold_333-1510915933:134427..134612TCONS_00060007-exon-scaffold_333-1510915933:134427..134612Clytia hemisphaericaexon
TCONS_00060007-exon-scaffold_333-1575043694:134427..134612TCONS_00060007-exon-scaffold_333-1575043694:134427..134612Clytia hemisphaericaexon
TCONS_00060007-exon-scaffold_333-1491911889:139575..139698TCONS_00060007-exon-scaffold_333-1491911889:139575..139698Clytia hemisphaericaexon
TCONS_00060007-exon-scaffold_333-1510915933:139575..139698TCONS_00060007-exon-scaffold_333-1510915933:139575..139698Clytia hemisphaericaexon
TCONS_00060007-exon-scaffold_333-1575043694:139575..139698TCONS_00060007-exon-scaffold_333-1575043694:139575..139698Clytia hemisphaericaexon
TCONS_00060007-exon-scaffold_333-1491911889:140121..140252TCONS_00060007-exon-scaffold_333-1491911889:140121..140252Clytia hemisphaericaexon
TCONS_00060007-exon-scaffold_333-1510915933:140121..140252TCONS_00060007-exon-scaffold_333-1510915933:140121..140252Clytia hemisphaericaexon
TCONS_00060007-exon-scaffold_333-1575043694:140121..140252TCONS_00060007-exon-scaffold_333-1575043694:140121..140252Clytia hemisphaericaexon
TCONS_00060007-exon-scaffold_333-1491911889:140414..140483TCONS_00060007-exon-scaffold_333-1491911889:140414..140483Clytia hemisphaericaexon
TCONS_00060007-exon-scaffold_333-1510915933:140414..140483TCONS_00060007-exon-scaffold_333-1510915933:140414..140483Clytia hemisphaericaexon
TCONS_00060007-exon-scaffold_333-1575043694:140414..140483TCONS_00060007-exon-scaffold_333-1575043694:140414..140483Clytia hemisphaericaexon
TCONS_00060007-exon-scaffold_333-1491911889:140816..140920TCONS_00060007-exon-scaffold_333-1491911889:140816..140920Clytia hemisphaericaexon
TCONS_00060007-exon-scaffold_333-1510915933:140816..140920TCONS_00060007-exon-scaffold_333-1510915933:140816..140920Clytia hemisphaericaexon
TCONS_00060007-exon-scaffold_333-1575043694:140816..140920TCONS_00060007-exon-scaffold_333-1575043694:140816..140920Clytia hemisphaericaexon
TCONS_00060007-exon-scaffold_333-1491911889:141132..141369TCONS_00060007-exon-scaffold_333-1491911889:141132..141369Clytia hemisphaericaexon
TCONS_00060007-exon-scaffold_333-1510915933:141132..141369TCONS_00060007-exon-scaffold_333-1510915933:141132..141369Clytia hemisphaericaexon
TCONS_00060007-exon-scaffold_333-1575043694:141132..141369TCONS_00060007-exon-scaffold_333-1575043694:141132..141369Clytia hemisphaericaexon
TCONS_00060007-exon-scaffold_333-1491911889:141726..141878TCONS_00060007-exon-scaffold_333-1491911889:141726..141878Clytia hemisphaericaexon
TCONS_00060007-exon-scaffold_333-1510915933:141726..141878TCONS_00060007-exon-scaffold_333-1510915933:141726..141878Clytia hemisphaericaexon
TCONS_00060007-exon-scaffold_333-1575043694:141726..141878TCONS_00060007-exon-scaffold_333-1575043694:141726..141878Clytia hemisphaericaexon
TCONS_00060007-exon-scaffold_333-1491911889:142186..142254TCONS_00060007-exon-scaffold_333-1491911889:142186..142254Clytia hemisphaericaexon
TCONS_00060007-exon-scaffold_333-1510915933:142186..142254TCONS_00060007-exon-scaffold_333-1510915933:142186..142254Clytia hemisphaericaexon
TCONS_00060007-exon-scaffold_333-1575043694:142186..142254TCONS_00060007-exon-scaffold_333-1575043694:142186..142254Clytia hemisphaericaexon
TCONS_00060007-exon-scaffold_333-1491911889:142621..143427TCONS_00060007-exon-scaffold_333-1491911889:142621..143427Clytia hemisphaericaexon
TCONS_00060007-exon-scaffold_333-1510915933:142621..143427TCONS_00060007-exon-scaffold_333-1510915933:142621..143427Clytia hemisphaericaexon
TCONS_00060007-exon-scaffold_333-1575043694:142621..143427TCONS_00060007-exon-scaffold_333-1575043694:142621..143427Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060007-proteinTCONS_00060007-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_333supercontigscaffold_333:134427..143427 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
681.01	681.287	720.797	709.213	106.565	88.3863	212.682	226.596	498.572	435.53	667.994	729.338	1115.27	1108.99	933.74	915.983	1054.25	1168.83	1224.98	1268.74	1084.01	1111.48	718.894	778.946	976.184	858.11	1039.34	1281.26	882.745	896.861
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR022383Lactate/malate_DH_C
IPR010097Malate_DH_type1
IPR001557L-lactate/malate_DH
IPR001236Lactate/malate_DH_N
IPR001252Malate_DH_AS
IPR015955Lactate_DH/Glyco_Ohase_4_C
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0030060L-malate dehydrogenase activity
GO:0016491oxidoreductase activity
GO:0016615malate dehydrogenase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006099tricarboxylic acid cycle
GO:0019752carboxylic acid metabolic process
GO:0006108malate metabolic process
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0019752 carboxylic acid metabolic process
biological_process GO:0006108 malate metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006099 tricarboxylic acid cycle
molecular_function GO:0003824 catalytic activity
molecular_function GO:0030060 L-malate dehydrogenase activity
molecular_function GO:0016615 malate dehydrogenase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
Blast
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BLAST of TCONS_00060007 vs. Swiss-Prot (Human)
Match: MDHM (Malate dehydrogenase, mitochondrial OS=Homo sapiens GN=MDH2 PE=1 SV=3)

HSP 1 Score: 456.833 bits (1174), Expect = 3.533e-156
Identity = 220/332 (66.27%), Postives = 273/332 (82.23%), Query Frame = 1 
Query:  130 NTLRRQVSKSVRQ-LSTSSQNNVKVAVLGASGGIGQPLALLLKHSPMVSHLALYDLAPFTPGVGCDLSHIETIGKVTAHMGPENLDECVKDCSLVLIPAGMPRKPGMTRDDLFNTNASIAMNLADACARNCPEAVLGIITNPVNSTVPIAAEVFKKHGVYNPSKILGVTTLDVVRANTFVAELKGLDVSKTNVPVIGGHSGVTILPLLSQVVPKVSFTDDEIAAMTTRIQNAGTEVVEAKAGAGSATLSMAYAGARFGFSILEAMNGKKGVVECCYRESSITEASYFATPMLLGPGGAEKDLGIGDMTDFEKEKLDELMPELKSNIAKGEKF 1122
            + L R  S ++R+  STS+QNN KVAVLGASGGIGQPL+LLLK+SP+VS L LYD+A  TPGV  DLSHIET   V  ++GPE L +C+K C +V+IPAG+PRKPGMTRDDLFNTNA+I   L  ACA++CPEA++ +I NPVNST+PI AEVFKKHGVYNP+KI GVTTLD+VRANTFVAELKGLD ++ NVPVIGGH+G TI+PL+SQ  PKV F  D++ A+T RIQ AGTEVV+AKAGAGSATLSMAYAGARF FS+++AMNGK+GVVEC + +S  TE +YF+TP+LLG  G EK+LGIG ++ FE++ + + +PELK++I KGE F
Sbjct:    3 SALARPASAALRRSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIA-HTPGVAADLSHIETKAAVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICVIANPVNSTIPITAEVFKKHGVYNPNKIFGVTTLDIVRANTFVAELKGLDPARVNVPVIGGHAGKTIIPLISQCTPKVDFPQDQLTALTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDAMNGKEGVVECSFVKSQETECTYFSTPLLLGKKGIEKNLGIGKVSSFEEKMISDAIPELKASIKKGEDF 333
The following BLAST results are available for this feature:
BLAST of TCONS_00060007 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MDHM3.533e-15666.27Malate dehydrogenase, mitochondrial OS=Homo sapien... [more]
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