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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059887 ID=TCONS_00059887|Name=TCONS_00059887|organism=Clytia hemisphaerica|type=transcript|length=1457bp
ACACAAGAAGAATGGCGAGTTGTTTTCTTCATTGCTGCTTCAATCTACTT
ATTTGGTTTATTGTTTTACTGTATCTTTGCGTCTGGTGAGAAACAAGAAT
GGGCTGATGGCAATCAATACTTCAACCATACCAATGATGATGGTGAAGAG
GGTCATGAATTGCTGGCTAACAAGAGTGGCGTTGACGAGGAGGATGAGTA
AATATGGTTTGTGAACAGTTGTGAATGGTTTTCTGTTATTTGGTTGGGGT
TTGGTTGGTTTTCTGTCCTTTCTTTTCGTCGACACTTAAGATGTTGAGCC
ACTCATTGAGTGGAAAATGGTATTGGCGAAGGGCTATAAACTGCTGCTCA
AAAGTTGTTTGGTTGAGGATGAATAAatatttgcttttttatttggtttg
gccGAGTGCATGACCTTTTTTCTGCTCTGCCTCTCTaactaaattatttt
gaattctaTTAAGTCTTAGCTCTGTGCTTTGACATAGTATGAGTCGTACT
AAGGGGTCTTATTAGGCCCAGAGAACGGCGAATTTCACCGGTATAAGGCA
CGAGAAAAATTACAATTCGCCGTTCGAAAAGTTCGGTTCGCCGCTTCAAG
TACATATTTACGCTAATCAATGCACTGCATTTGCTAAGAGTTTGTCAGCC
TAGAATCTAGATATCgccagagttaatttttcatttgtcagtctaccaaa
aacaaagcaaaaccccGGAGTACTAGTATGAGTCATTATGCAAACTTGTC
ATTGTTATTCTTCTTGTTTTGTATGGTTAATGTAATCTTTTctattcatt
ttctttcttttttttggctAAGCCAACCACAAAGGCCGGTCTCAACTTGC
GCACGCTGCGGTCGCacttttttcgagcaaagcttccacgctatcggtca
aaagaaaaattaaacaattCCATTGGTGCGATCTGACGTAGCGGTtgaag
aaatttgaaatgtattcaacttttttttcgagcgcgcgctgcatttttat
gacgtaatctttttccaAACCAAAATGGTTGAGgccaaaaggtgcgatcg
cagtgcgtgcaagtggagaccgacctTAACATGCTTTTCTATTTAACCAT
GTTTTAAGTTAGGCGGTGACGATCTTATCAGTTTTTACCTTGATAAAGTA
CAACAAAGAAAACTGCTTATAGGTGTTTTCTCCCTAGCATCCTTGATGGC
CTAaatatttgcatttttttaaattttttctgttCGGGGTCATAGAATTA
TATAGAtgagatttattttatttttaaatttttattttgttcacaTCAAC
TGCACTTAGATAAGTATTTATTGACAGTTTTTGTAGTGGATGAAGACCAT
ATTGTACTAATTTCCGTACATACCCGCATTGATCCCTAATTTCAACAAGA
TATCATTAGATTTGATGCGTACCTTTTAGAGAAATTGTTATGTTGGTAGA
GTAAATG Run BLAST on NCBI transcript from alignment at scaffold_331:314776..316232- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059887 ID=TCONS_00059887|Name=TCONS_00059887|organism=Clytia hemisphaerica|type=transcript|length=1457bp|location=Sequence derived from alignment at scaffold_331:314776..316232- (Clytia hemisphaerica)
ACACAAGAAGAATGGCGAGTTGTTTTCTTCATTGCTGCTTCAATCTACTT
ATTTGGTTTATTGTTTTACTGTATCTTTGCGTCTGGTGAGAAACAAGAAT
GGGCTGATGGCAATCAATACTTCAACCATACCAATGATGATGGTGAAGAG
GGTCATGAATTGCTGGCTAACAAGAGTGGCGTTGACGAGGAGGATGAGTA
AATATGGTTTGTGAACAGTTGTGAATGGTTTTCTGTTATTTGGTTGGGGT
TTGGTTGGTTTTCTGTCCTTTCTTTTCGTCGACACTTAAGATGTTGAGCC
ACTCATTGAGTGGAAAATGGTATTGGCGAAGGGCTATAAACTGCTGCTCA
AAAGTTGTTTGGTTGAGGATGAATAAATATTTGCTTTTTTATTTGGTTTG
GCCGAGTGCATGACCTTTTTTCTGCTCTGCCTCTCTAACTAAATTATTTT
GAATTCTATTAAGTCTTAGCTCTGTGCTTTGACATAGTATGAGTCGTACT
AAGGGGTCTTATTAGGCCCAGAGAACGGCGAATTTCACCGGTATAAGGCA
CGAGAAAAATTACAATTCGCCGTTCGAAAAGTTCGGTTCGCCGCTTCAAG
TACATATTTACGCTAATCAATGCACTGCATTTGCTAAGAGTTTGTCAGCC
TAGAATCTAGATATCGCCAGAGTTAATTTTTCATTTGTCAGTCTACCAAA
AACAAAGCAAAACCCCGGAGTACTAGTATGAGTCATTATGCAAACTTGTC
ATTGTTATTCTTCTTGTTTTGTATGGTTAATGTAATCTTTTCTATTCATT
TTCTTTCTTTTTTTTGGCTAAGCCAACCACAAAGGCCGGTCTCAACTTGC
GCACGCTGCGGTCGCACTTTTTTCGAGCAAAGCTTCCACGCTATCGGTCA
AAAGAAAAATTAAACAATTCCATTGGTGCGATCTGACGTAGCGGTTGAAG
AAATTTGAAATGTATTCAACTTTTTTTTCGAGCGCGCGCTGCATTTTTAT
GACGTAATCTTTTTCCAAACCAAAATGGTTGAGGCCAAAAGGTGCGATCG
CAGTGCGTGCAAGTGGAGACCGACCTTAACATGCTTTTCTATTTAACCAT
GTTTTAAGTTAGGCGGTGACGATCTTATCAGTTTTTACCTTGATAAAGTA
CAACAAAGAAAACTGCTTATAGGTGTTTTCTCCCTAGCATCCTTGATGGC
CTAAATATTTGCATTTTTTTAAATTTTTTCTGTTCGGGGTCATAGAATTA
TATAGATGAGATTTATTTTATTTTTAAATTTTTATTTTGTTCACATCAAC
TGCACTTAGATAAGTATTTATTGACAGTTTTTGTAGTGGATGAAGACCAT
ATTGTACTAATTTCCGTACATACCCGCATTGATCCCTAATTTCAACAAGA
TATCATTAGATTTGATGCGTACCTTTTAGAGAAATTGTTATGTTGGTAGA
GTAAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059887-exon-scaffold_331-1575043694:314776..316232 | TCONS_00059887-exon-scaffold_331-1575043694:314776..316232 | Clytia hemisphaerica | exon |
| TCONS_00059887-exon-scaffold_331-1510915933:314776..316232 | TCONS_00059887-exon-scaffold_331-1510915933:314776..316232 | Clytia hemisphaerica | exon |
| TCONS_00059887-exon-scaffold_331-1491911889:314776..316232 | TCONS_00059887-exon-scaffold_331-1491911889:314776..316232 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_331 | supercontig | scaffold_331:314776..316232 - |
Blast
The following BLAST results are available for this feature:
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