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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059802 ID=TCONS_00059802|Name=TCONS_00059802|organism=Clytia hemisphaerica|type=transcript|length=988bp
ccccaaaaacatcaaaattcgcAAAGTAgaatcatagatttataaagctc
gAAGGGATAGatgctcttccaagcaaaaagtgaatatcgcaaaaaaatat
tgctgctattgttttcgaaaacccgcgaagattctgattggtcaagcgct
ggaattctattgtaatgtgacgtgacttaggtaggatttcctacctaacc
tcggcacacttttcagcaaaagcacgatatctagcccttcgggctttaca
aatcTACGAgtagaatagaccttttgcgTCGAAAAAGCCTTGACGCCTAG
CGTAGACTATAAAAAATCCATTTCTTCTCAATGTTTCAGGTGGTTACAAA
CTTTCGAAGGGCAAACTCCTCCGATTCATCCCGCGCATTGAGAAGCAATG
GTATATGTCTTTCGACGTCAAACACTTGGGAAGCGTCAAGAACCACTGGA
CCAACATTTTACACTCCACTATCGGCGGCAACGACGGAACATTCGGTTAC
CGTATTCCAGGAATCTGGTTCGTCCCAAACACCCGGAAGCTCCATATCTG
CCACGCCATCAACAATGACCCTAGTTATTGTTTCAACACACCAAACCATG
TTCCGCTCAACAAATACACTAATGTTCAGATCGCCCAAATCTACGAGACC
GATTATAAGAGATATCGATACACCATCTTAATTAACAGAATACAGAGGTT
CACCATCATCAACAACACACCTCGCGTTTTCCATGACGTCAGATTGTGGG
GTTCAGACCCCTGGTTTAACGCAGCCAACGCGTCCATCAAGAATGTTGTT
TTCAGAAGTATTCCACACAAAAAATGAGGGACttgcatttttttaaactt
cttaAAGGGATTTTAATTATTCTTGTCTCCCGAAAAGACGGGGGTAGGAa
agttttctaaattctaataaacgggggataatttgaagacagaatttttt
ttgactgatatcaattttaacatcaaaaaataaactct Run BLAST on NCBI transcript from alignment at scaffold_331:509095..510082+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059802 ID=TCONS_00059802|Name=TCONS_00059802|organism=Clytia hemisphaerica|type=transcript|length=988bp|location=Sequence derived from alignment at scaffold_331:509095..510082+ (Clytia hemisphaerica)
ccccaaaaacatcaaaattcgcAAAGTAgaatcatagatttataaagctc
gAAGGGATAGatgctcttccaagcaaaaagtgaatatcgcaaaaaaatat
tgctgctattgttttcgaaaacccgcgaagattctgattggtcaagcgct
ggaattctattgtaatgtgacgtgacttaggtaggatttcctacctaacc
tcggcacacttttcagcaaaagcacgatatctagcccttcgggctttaca
aatcTACGAgtagaatagaccttttgcgTCGAAAAAGCCTTGACGCCTAG
CGTAGACTATAAAAAATCCATTTCTTCTCAATGTTTCAGGTGGTTACAAA
CTTTCGAAGGGCAAACTCCTCCGATTCATCCCGCGCATTGAGAAGCAATG
GTATATGTCTTTCGACGTCAAACACTTGGGAAGCGTCAAGAACCACTGGA
CCAACATTTTACACTCCACTATCGGCGGCAACGACGGAACATTCGGTTAC
CGTATTCCAGGAATCTGGTTCGTCCCAAACACCCGGAAGCTCCATATCTG
CCACGCCATCAACAATGACCCTAGTTATTGTTTCAACACACCAAACCATG
TTCCGCTCAACAAATACACTAATGTTCAGATCGCCCAAATCTACGAGACC
GATTATAAGAGATATCGATACACCATCTTAATTAACAGAATACAGAGGTT
CACCATCATCAACAACACACCTCGCGTTTTCCATGACGTCAGATTGTGGG
GTTCAGACCCCTGGTTTAACGCAGCCAACGCGTCCATCAAGAATGTTGTT
TTCAGAAGTATTCCACACAAAAAATGAGGGACttgcatttttttaaactt
cttaAAGGGATTTTAATTATTCTTGTCTCCCGAAAAGACGGGGGTAGGAa
agttttctaaattctaataaacgggggataatttgaagacagaatttttt
ttgactgatatcaattttaacatcaaaaaataaactct
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059802-exon-scaffold_331-1491911889:509095..510082 | TCONS_00059802-exon-scaffold_331-1491911889:509095..510082 | Clytia hemisphaerica | exon |
| TCONS_00059802-exon-scaffold_331-1510915933:509095..510082 | TCONS_00059802-exon-scaffold_331-1510915933:509095..510082 | Clytia hemisphaerica | exon |
| TCONS_00059802-exon-scaffold_331-1575043694:509095..510082 | TCONS_00059802-exon-scaffold_331-1575043694:509095..510082 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_331 | supercontig | scaffold_331:509095..510082 + |
Blast
The following BLAST results are available for this feature:
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