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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059795 ID=TCONS_00059795|Name=TCONS_00059795|organism=Clytia hemisphaerica|type=transcript|length=275bp
AGGAAGAAGAACCAGATtgatatgacgtcattattaGAGAAATTAAATGT
TAGAAAGATCAGTCACTAAATTAACGTGGACAAGCCATCATTCAGTCATT
TGGAATCGGATTACGGAACGGGAACTTCAGCGCGATACATCGATCAATAT
TTATCACCATGATGATCCCGAGAGAAATAGATGTAAAAGAACGCCATGTT
AGTGGTAAAAGTTTACATCCAACCAAACCGAAATCCCAAGTTGAAAATTG
GTTTACTGTCAAATATATAAAGAGG Run BLAST on NCBI transcript from alignment at scaffold_331:420427..421669+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059795 ID=TCONS_00059795|Name=TCONS_00059795|organism=Clytia hemisphaerica|type=transcript|length=1243bp|location=Sequence derived from alignment at scaffold_331:420427..421669+ (Clytia hemisphaerica)
AGGAAGAAGAACCAGATtgatatgacgtcattattaGTAAGTGTGTGTAT
TTTCGATTCTCGCTTTTATTTCTCAGAAAAGTCGAGGACTTCAGGGTAAT
TAAACTAGGTAGTTGCTAATGAACTTTGGATTCTTTTCTCTTgtcatttt
aaaatctatttACAATATCATATCATTTTATTTGCTTTCCTACATCTCAA
CTGCATTACCAATTTGAAAAAAGGCAGGCGCAATCAATTAACAATTAACC
CACAGTTACTGAAAAAATCATGCTAATTATCTTTTCAGGAGAAATTAAAT
GTTAGAAAGATCAGTCACTAAATTAACGTGGACAAGCCATCATTCAGTCA
TTTGGTAAGCAACCCAGTCtatattcaataaaatttatgtcacgaataaa
gaaaatcaatctaCGGTACTCGTTGTACCACCATTAAAACTACTGAGCAA
TCTCTGCCTTGTTGACAAATACGATCTGACACTTCCAGAAGTCTGTTTTT
TCCTCGGTTTGGCGATCGAGAAGAAAGTATCGAAAACAGATTTCCTGAAT
TTCCGTTGTAATTTTGCATAAATAATGATATTGTAAATTGTGTTACAACA
CATCATGGCTGTTAAAATACTGTTCACTTTTCGTAAACTTGCAGTTAATA
TGATACCTTTGCCAGGTGTCATCCACGTCAACGTATACACAATATGTAAT
AGCTCCCTTGGGAATACTGATACTACAAACGCTGTCGCCACCAGTAAAAG
CATTTTCAAGACTCTATGATTCTCCTTTAAACGAGCTTGATTCTGTAAAT
GTGGTAGATTCTGGCCAACATTTTTCTTTATGTTTAGTTCTCGTTTAATC
ACAATAAAAGTTACAAGGAAAACAGTCAAATATAATGAATCTCTAATCAG
CATTATTGAAATGACAGGATAAGCATAACCATGAACCTTGACAGATGGAA
CATTACATATTTTTGATCCTCCCGGCGAAACCTTTATCTTTGCGTAAATC
AAATACGGTAATTCCATCACAATAGACAAAACAATAATAAACAGTACAAT
CATATTAATCCGTTTTTTAGGAATCGGATTACGGAACGGGAACTTCAGCG
CGATACATCGATCAATATTTATCACCATGATGATCCCGAGAGAAATAGAT
GTAAAAGAACGCCATGTTAGTGGTAAAAGTTTACATCCAACCAAACCGAA
ATCCCAAGTTGAAAATTGGTTTACTGTCAAATATATAAAGAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059795-exon-scaffold_331-1491911889:420427..420462 | TCONS_00059795-exon-scaffold_331-1491911889:420427..420462 | Clytia hemisphaerica | exon |
| TCONS_00059795-exon-scaffold_331-1510915933:420427..420462 | TCONS_00059795-exon-scaffold_331-1510915933:420427..420462 | Clytia hemisphaerica | exon |
| TCONS_00059795-exon-scaffold_331-1575043694:420427..420462 | TCONS_00059795-exon-scaffold_331-1575043694:420427..420462 | Clytia hemisphaerica | exon |
| TCONS_00059795-exon-scaffold_331-1491911889:420715..420780 | TCONS_00059795-exon-scaffold_331-1491911889:420715..420780 | Clytia hemisphaerica | exon |
| TCONS_00059795-exon-scaffold_331-1510915933:420715..420780 | TCONS_00059795-exon-scaffold_331-1510915933:420715..420780 | Clytia hemisphaerica | exon |
| TCONS_00059795-exon-scaffold_331-1575043694:420715..420780 | TCONS_00059795-exon-scaffold_331-1575043694:420715..420780 | Clytia hemisphaerica | exon |
| TCONS_00059795-exon-scaffold_331-1491911889:421497..421669 | TCONS_00059795-exon-scaffold_331-1491911889:421497..421669 | Clytia hemisphaerica | exon |
| TCONS_00059795-exon-scaffold_331-1510915933:421497..421669 | TCONS_00059795-exon-scaffold_331-1510915933:421497..421669 | Clytia hemisphaerica | exon |
| TCONS_00059795-exon-scaffold_331-1575043694:421497..421669 | TCONS_00059795-exon-scaffold_331-1575043694:421497..421669 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_331 | supercontig | scaffold_331:420427..421669 + |
Blast
The following BLAST results are available for this feature:
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