TCONS_00059785 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059785
Unique NameTCONS_00059785
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1589

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059785 ID=TCONS_00059785|Name=TCONS_00059785|organism=Clytia hemisphaerica|type=transcript|length=1589bp
aaattttgaaatttatatgtTCTTTAggtaaaactatttttgaattCTAC
TGACCTAACTATTGAATATTGAGCAGACATCAAAACAACTCTGACAATTT
TAAAATGGCTATTCGTAGATCATCTGGCATGAAACAACTCTCAACATCTG
ACATGACAATACAACCATCAACATCTGACATGATACAATTAAAAACGACT
GACATGACACAACCAATAACACCTGACATGACAAATACAACCCTTTTAAT
TACCCTCCAGAGAAAACAACTCTTTGGTTTATTGGCACTAtacgaaattt
ttaatttaCTGACACTTGTTGAGATGGTCAATGGATGATCAAAATGAGAG
AGAAAAGGATCCTAACGATTTCGATGTGCAAAACATGGCATCTAACATCA
CTGACTTGCTAAAACGCTGCTACAGAGCTACTTGCTATGATGCAATTTTT
CAAGAAGCTATTAAGAATgcaattttgaatgaaaagaatGGCACGCCTCA
GCTTCTATCTGGAGAAAAGCAATTGTTAAATCTTGCGACCTATTCTCGCT
GTACTGATGCCATATTGTATGTTATGCCATTGATATTCAACATTGAAGGA
CGGAATTTATTGTATTTAAGATGCTTTGAAAGAGGACTTTGCAACAACTT
TCTGAAATCTAATTGGCGAATTATATTCAAAGAATTGGTGGAGATGCATG
ATATCCAGGATTGCTTTATACTACACATTTTCAATGATTGGGATGTAATG
GCAGCTTATAATCATAGAATATCGAAATCAAAAAAAGCAGGGCAGGTAGA
AGAAAAAAACTCGAAAATATTCAAGAAATTGTGCACATCAAACAAAGAAT
CCATCAAAAACCTTTTTCCGTTTGCACATGCCATCATGAAGAAATCCTTC
GAAGAGCGATCACCAGGGTTCATTGTATTTTGTCAACGAAAGGCCAAATT
TTGTAGATCTGATCCATGGGATAAAGAAAACagctttttaaaagtCGAAG
GTCTCGGAGATCAATCCAGCCTACCGAAAATGATCCGTGACTACATGACG
AACCGTGAGGAACAAAAAGAAACAATATTTAACATCTACGACTGCTTTCA
TGATAATGAGGCTCTTACCTTGGAAGAAGAATCTACTATCCTTTCGGCTG
TTCCAAATTTTCATCATTGGGCAACCACCCATTCTAGTGGCGTAAAAATG
gaacagtatttcttgaattctGGCAACTCGCCACGAAATATCATCGTTTG
TGCTCTCAACGAGTATTTGTTCGAGTCTTTTGACACCttaaatttggtga
aaaatacCTTAGCACTTGTATTGGCTAAAAAATACCATATGGCGAAGCCT
CCGTGTCAAAATAAGAATCAGATCCGTCACCATGGGATTCGGAAGACTAT
TGACAGGCAATTACTTCTGGACCAATTGGGTTTGACTGATGATGATTTTG
AGCAAACAAATATTCCATCCGAAAACATATATCCGAAGTTTAAATCTCAT
TTATATAATAATGGGACGATATTATGGAGAGATTATACAGAACATACTCA
AACAATTGTTATGAATGATTATAATACAGACACCGGTGC
Run BLAST on NCBI

protein sequence of TCONS_00059785-protein

>TCONS_00059785-protein ID=TCONS_00059785-protein|Name=TCONS_00059785-protein|organism=Clytia hemisphaerica|type=polypeptide|length=419bp
MDDQNEREKDPNDFDVQNMASNITDLLKRCYRATCYDAIFQEAIKNAILN
EKNGTPQLLSGEKQLLNLATYSRCTDAILYVMPLIFNIEGRNLLYLRCFE
RGLCNNFLKSNWRIIFKELVEMHDIQDCFILHIFNDWDVMAAYNHRISKS
KKAGQVEEKNSKIFKKLCTSNKESIKNLFPFAHAIMKKSFEERSPGFIVF
CQRKAKFCRSDPWDKENSFLKVEGLGDQSSLPKMIRDYMTNREEQKETIF
NIYDCFHDNEALTLEEESTILSAVPNFHHWATTHSSGVKMEQYFLNSGNS
PRNIIVCALNEYLFESFDTLNLVKNTLALVLAKKYHMAKPPCQNKNQIRH
HGIRKTIDRQLLLDQLGLTDDDFEQTNIPSENIYPKFKSHLYNNGTILWR
DYTEHTQTIVMNDYNTDTG
Run BLAST on NCBI

transcript from alignment at scaffold_331:202969..206228+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059785 ID=TCONS_00059785|Name=TCONS_00059785|organism=Clytia hemisphaerica|type=transcript|length=3260bp|location=Sequence derived from alignment at scaffold_331:202969..206228+ (Clytia hemisphaerica)
aaattttgaaatttatatgtTCTTTAggtaaaactatttttgaattCTAC
TGACCTAACTATTGAATATTGAGCAGACATCAAAACAACTCTGACAATTT
TAAAATGGCTATTCGTAGATCATCTGGCATGAAACAACTCTCAACATCTG
ACATGACAATACAACCATCAACATCTGACATGATACAATTAAAAACGACT
GACATGACACAACCAATAACACCTGACATGACAAATACAACCCTTTTAAT
TACCCTCCAGAGAAAACAACTCTTTGGTTTATTGGCACTAtacgaaattt
ttaatttaCTGACACTTGTTGAGATGGtaattatttataatttttctatG
TTAAGACTTAAAGTAACATTTCAACCCtagttttttctttcttgtgatTG
GACAGAATTACTATTTATCTGCTTTCTTTTCATTAGGNTTTAAAAGTAAC
ATTTTAACCCtagttttttctttcttgtgatTGGACAGAATTACTATTTa
tctgttttcttttcattagGTCAATGGATGATCAAAATGAGAGAGAAAAG
GATCCTAACGGTGGGCGTTAAATTTATTTGTATTAACGAATGTGTGCTGA
ATTAAGAGATAGGATTGTAAGATTATTACTTATCTCTCACAAGTGAAATT
GACATCAAAGATTATATTGAAATGCGAtgagatgaaaataataaaaagaa
actatttAATTTATAAGCAGAAGTCTGACTTTTTGCTCTACCAGTGCAGA
CTTGCTTTGATGTTCTCGTATGTCAAGtgtaaaatatgaaatacaTAATT
CCTCTCAGCCAATCGGTTTGCTTTTACTTTTCAAGTTTGCGATAACAGTA
ATTAATGGTGAAGCTTTTAATTGTATTCATAGATTTCGATGTGCAAAACA
TGGCATCTAACATCACTGACTTGCTAAAACGCTGCTACAGAGCTACTTGC
TATGATGCAATTTTTCAAGAAGCTATTAAGAATgcaattttgaatgaaaa
gaatGGCACGCCTCAGCTTCTATCTGGAGAAAAGCAATTGTTAAATCTTG
CGACCTATTCTCGCTGTACTGATGCCATATTGTATGTTATGCCATTGATA
TTCAACATTGAAGGACGGAATTTATTGTATTTAAGGTATTATACTCTGAC
CATGTTTTTATTCACTATTCACCATTTAATAATAAACAAGATGAAGTTTT
CATTTTCGATAGAAATCTTTACCTTGGTGAATTGTAGTTTacatcaaaaa
tcttttttaaatccttTTTTTAGATGCTTTGAAAGAGGACTTTGCAACAA
CTTTCTGAAATCTAATTGGCGAATTATATTCAAAGAATTGGTGGAGATGC
ATGATATCCAGGATTGCTTTATACTACACATTTTCAATGATTGGGATGTA
ATGGCAGCTTATAATCATAGAATATCGAAATCAAAAAAAGCAGGTATATA
AAAATCCAACCCTGCTTTATGCTCTTTTGTTAATCATTTTGCTCATGTAG
ATTAATCATGTAGAACCATAAAATAGCTTTGTAGAGCTATGTCATTAACC
TAAACGGCATGAATTACTTTTTGCAAAAGAATTATACTCTGGGTGATATT
TGTAATTTTAGGGCAGGTAGAAGAAAAAAACTCGAAAATATTCAAGAAAT
TGTGCACATCAAACAAAGAATCCATCAAAAACCTTTTTCCGTTTGCACAT
GCCATCATGAAGAAATCCTTCGAAGAGCGATCACCAGGGTTCATTGTATT
TTGTCAACGAAAGGCCAAATTTTGTAGATCTGATCCATGGGATAAAGAAA
ACaggtttgatattttttgactACTTCTAAATCCAGAaacagaattttta
aaaattactaCATTCCATCATATTGAAGTGGCATTGCCAAATCACTTTTG
CTTTGTATTGAATTAGCCAAACAACTtttctttttaagctttttaaaagt
CGAAGGTCTCGGAGATCAATCCAGCCTACCGAAAATGATCCGTGACTACA
TGACGAACCGTGAGGAACAAAAAGAAACAATATTTAACATCTACGACTGC
TTTCATGATAATGAGGCTCTTACCTTGGAAGAAGAATCTACTATCCTTTC
GGCTGTTCCAAATTTTCATCATTGGGCAACCACCCATTCTAGTGGCGTAA
AAATGgaacagtatttcttgaattctGGCAACTCGCCACGAAATATCATC
GTTTGTGCTCTCAACGAGTATTTGTTCGAGTCTTTTGACACCttaaattt
ggtgaaaaatacCTTAGCACTTGTATTGGCTAAAAAATACCATATGGCGA
AGCCTCCGTGTCAAAATAAGAATCAGGTGAGTAAAACAGATTTTATCGCC
CCTTTCAATTATGTGAAATATGTGTACGTACGTTATAGAGCCGCTTCTTT
AGGGTAAGAAATTTTCCCATGTAGGAAATTTCGGGCAacttcgcgaaaat
taattccgcaaaatattttgaattactGATTTGCgcgataaaaaaatgtt
ttacctgGAAATCTGCTTTTGGccataaattttcctttttaaatcaattt
taggGCACAGGTTAAAACATCGAGATAAACAGCTCTTTCTAGTCTGTTGC
ttctaaaaattgaattgaaattcaaGATAAAAGGAAAGAAATATAAACGA
ATCGCGAAGGTTTTCACTCTAGGAATCTAAAAGATTTGTGAATTTTCCCA
TTCGCAAAAGTTTTTCCCGTGAAAGTTTCTTACCCTAAGTATACAAATCA
ACCTCAACATTTCCAATTTAGGACAATTCTGAAAGTACCGTACGATGTTa
agctttcaaaatttctgtTAATTTTTGTAATATGCCATTTTCATCAGCTA
TTAGTTATTCTTGAATGTTTTCCTTTTAAAAGATCCGTCACCATGGGATT
CGGAAGACTATTGACAGGCAATTACTTCTGGACCAATTGGGTTTGACTGA
TGATGATTTTGAGCAAACAAATATTCCATCCGAAAACATATATCCGAAGT
TTAAATCTCATTTGTACGTAACTATGacttgtttattaatttttgagaaa
atatttttaaacttctATAACATTCAGAGTCAGAGAGTCGGTGTATCAGG
GAACTAAATGAAGTTGTGggggtttggtacaggctagctAAATCCGAGTG
AAACTTTCAGGATTTTCTTCTAGATATAATAATGGGACGATATTATGGAG
AGATTATACAGAACATACTCAAACAATTGTTATGAATGATTATAATACAG
ACACCGGTGC

Coding sequence (CDS) from alignment at scaffold_331:202969..206228+

>TCONS_00059785 ID=TCONS_00059785|Name=TCONS_00059785|organism=Clytia hemisphaerica|type=CDS|length=8799bp|location=Sequence derived from alignment at scaffold_331:202969..206228+ (Clytia hemisphaerica)
ATGGATGATCAAAATGAGAGAGAAAAGGATCCTAACGATTTCGATGTGCA
AAACATGGCATCTAACATCACTGACTTGCTAAAACGCTGCTACAGAGCTA
CTTGCTATGATGCAATTTTTCAAGAAGCTATTAAGAATgcaattttgaat
gaaaagaatGGCACGCCTCAGCTTCTATCTGGAGAAAAGCAATTGTTAAA
TCTTGCGACCTATTCTCGCTGTACTGATGCCATATTGTATGTTATGCCAT
TGATATTCAACATTGAAGGACGGAATTTATTGTATTTAAGATGCTTTGAA
AGAGGACTTTGCAACAACTTTCTGAAATCTAATTGGCGAATTATATTCAA
AGAATTGGTGGAGATGCATGATATCCAGGATTGCTTTATACTACACATTT
TCAATGATTGGGATGTAATGGCAGCTTATAATCATAGAATATCGAAATCA
AAAAAAGCAGGGCAGGTAGAAGAAAAAAACTCGAAAATATTCAAGAAATT
GTGCACATCAAACAAAGAATCCATCAAAAACCTTTTTCCGTTTGCACATG
CCATCATGAAGAAATCCTTCGAAGAGCGATCACCAGGGTTCATTGTATTT
TGTCAACGAAAGGCCAAATTTTGTAGATCTGATCCATGGGATAAAGAAAA
CagctttttaaaagtCGAAGGTCTCGGAGATCAATCCAGCCTACCGAAAA
TGATCCGTGACTACATGACGAACCGTGAGGAACAAAAAGAAACAATATTT
AACATCTACGACTGCTTTCATGATAATGAGGCTCTTACCTTGGAAGAAGA
ATCTACTATCCTTTCGGCTGTTCCAAATTTTCATCATTGGGCAACCACCC
ATTCTAGTGGCGTAAAAATGgaacagtatttcttgaattctGGCAACTCG
CCACGAAATATCATCGTTTGTGCTCTCAACGAGTATTTGTTCGAGTCTTT
TGACACCttaaatttggtgaaaaatacCTTAGCACTTGTATTGGCTAAAA
AATACCATATGGCGAAGCCTCCGTGTCAAAATAAGAATCAGATCCGTCAC
CATGGGATTCGGAAGACTATTGACAGGCAATTACTTCTGGACCAATTGGG
TTTGACTGATGATGATTTTGAGCAAACAAATATTCCATCCGAAAACATAT
ATCCGAAGTTTAAATCTCATTTATATAATAATGGGACGATATTATGGAGA
GATTATACAGAACATACTCAAACAATTGTTATGAATGATTATAATACAGA
CACCGGTATGGATGATCAAAATGAGAGAGAAAAGGATCCTAACGATTTCG
ATGTGCAAAACATGGCATCTAACATCACTGACTTGCTAAAACGCTGCTAC
AGAGCTACTTGCTATGATGCAATTTTTCAAGAAGCTATTAAGAATgcaat
tttgaatgaaaagaatGGCACGCCTCAGCTTCTATCTGGAGAAAAGCAAT
TGTTAAATCTTGCGACCTATTCTCGCTGTACTGATGCCATATTGTATGTT
ATGCCATTGATATTCAACATTGAAGGACGGAATTTATTGTATTTAAGATG
CTTTGAAAGAGGACTTTGCAACAACTTTCTGAAATCTAATTGGCGAATTA
TATTCAAAGAATTGGTGGAGATGCATGATATCCAGGATTGCTTTATACTA
CACATTTTCAATGATTGGGATGTAATGGCAGCTTATAATCATAGAATATC
GAAATCAAAAAAAGCAGGGCAGGTAGAAGAAAAAAACTCGAAAATATTCA
AGAAATTGTGCACATCAAACAAAGAATCCATCAAAAACCTTTTTCCGTTT
GCACATGCCATCATGAAGAAATCCTTCGAAGAGCGATCACCAGGGTTCAT
TGTATTTTGTCAACGAAAGGCCAAATTTTGTAGATCTGATCCATGGGATA
AAGAAAACagctttttaaaagtCGAAGGTCTCGGAGATCAATCCAGCCTA
CCGAAAATGATCCGTGACTACATGACGAACCGTGAGGAACAAAAAGAAAC
AATATTTAACATCTACGACTGCTTTCATGATAATGAGGCTCTTACCTTGG
AAGAAGAATCTACTATCCTTTCGGCTGTTCCAAATTTTCATCATTGGGCA
ACCACCCATTCTAGTGGCGTAAAAATGgaacagtatttcttgaattctGG
CAACTCGCCACGAAATATCATCGTTTGTGCTCTCAACGAGTATTTGTTCG
AGTCTTTTGACACCttaaatttggtgaaaaatacCTTAGCACTTGTATTG
GCTAAAAAATACCATATGGCGAAGCCTCCGTGTCAAAATAAGAATCAGAT
CCGTCACCATGGGATTCGGAAGACTATTGACAGGCAATTACTTCTGGACC
AATTGGGTTTGACTGATGATGATTTTGAGCAAACAAATATTCCATCCGAA
AACATATATCCGAAGTTTAAATCTCATTTATATAATAATGGGACGATATT
ATGGAGAGATTATACAGAACATACTCAAACAATTGTTATGAATGATTATA
ATACAGACACCGGTATGGATGATCAAAATGAGAGAGAAAAGGATCCTAAC
GATTTCGATGTGCAAAACATGGCATCTAACATCACTGACTTGCTAAAACG
CTGCTACAGAGCTACTTGCTATGATGCAATTTTTCAAGAAGCTATTAAGA
ATgcaattttgaatgaaaagaatGGCACGCCTCAGCTTCTATCTGGAGAA
AAGCAATTGTTAAATCTTGCGACCTATTCTCGCTGTACTGATGCCATATT
GTATGTTATGCCATTGATATTCAACATTGAAGGACGGAATTTATTGTATT
TAAGATGCTTTGAAAGAGGACTTTGCAACAACTTTCTGAAATCTAATTGG
CGAATTATATTCAAAGAATTGGTGGAGATGCATGATATCCAGGATTGCTT
TATACTACACATTTTCAATGATTGGGATGTAATGGCAGCTTATAATCATA
GAATATCGAAATCAAAAAAAGCAGGGCAGGTAGAAGAAAAAAACTCGAAA
ATATTCAAGAAATTGTGCACATCAAACAAAGAATCCATCAAAAACCTTTT
TCCGTTTGCACATGCCATCATGAAGAAATCCTTCGAAGAGCGATCACCAG
GGTTCATTGTATTTTGTCAACGAAAGGCCAAATTTTGTAGATCTGATCCA
TGGGATAAAGAAAACagctttttaaaagtCGAAGGTCTCGGAGATCAATC
CAGCCTACCGAAAATGATCCGTGACTACATGACGAACCGTGAGGAACAAA
AAGAAACAATATTTAACATCTACGACTGCTTTCATGATAATGAGGCTCTT
ACCTTGGAAGAAGAATCTACTATCCTTTCGGCTGTTCCAAATTTTCATCA
TTGGGCAACCACCCATTCTAGTGGCGTAAAAATGgaacagtatttcttga
attctGGCAACTCGCCACGAAATATCATCGTTTGTGCTCTCAACGAGTAT
TTGTTCGAGTCTTTTGACACCttaaatttggtgaaaaatacCTTAGCACT
TGTATTGGCTAAAAAATACCATATGGCGAAGCCTCCGTGTCAAAATAAGA
ATCAGATCCGTCACCATGGGATTCGGAAGACTATTGACAGGCAATTACTT
CTGGACCAATTGGGTTTGACTGATGATGATTTTGAGCAAACAAATATTCC
ATCCGAAAACATATATCCGAAGTTTAAATCTCATTTATATAATAATGGGA
CGATATTATGGAGAGATTATACAGAACATACTCAAACAATTGTTATGAAT
GATTATAATACAGACACCGGTATGGATGATCAAAATGAGAGAGAAAAGGA
TCCTAACGATTTCGATGTGCAAAACATGGCATCTAACATCACTGACTTGC
TAAAACGCTGCTACAGAGCTACTTGCTATGATGCAATTTTTCAAGAAGCT
ATTAAGAATgcaattttgaatgaaaagaatGGCACGCCTCAGCTTCTATC
TGGAGAAAAGCAATTGTTAAATCTTGCGACCTATTCTCGCTGTACTGATG
CCATATTGTATGTTATGCCATTGATATTCAACATTGAAGGACGGAATTTA
TTGTATTTAAGATGCTTTGAAAGAGGACTTTGCAACAACTTTCTGAAATC
TAATTGGCGAATTATATTCAAAGAATTGGTGGAGATGCATGATATCCAGG
ATTGCTTTATACTACACATTTTCAATGATTGGGATGTAATGGCAGCTTAT
AATCATAGAATATCGAAATCAAAAAAAGCAGGGCAGGTAGAAGAAAAAAA
CTCGAAAATATTCAAGAAATTGTGCACATCAAACAAAGAATCCATCAAAA
ACCTTTTTCCGTTTGCACATGCCATCATGAAGAAATCCTTCGAAGAGCGA
TCACCAGGGTTCATTGTATTTTGTCAACGAAAGGCCAAATTTTGTAGATC
TGATCCATGGGATAAAGAAAACagctttttaaaagtCGAAGGTCTCGGAG
ATCAATCCAGCCTACCGAAAATGATCCGTGACTACATGACGAACCGTGAG
GAACAAAAAGAAACAATATTTAACATCTACGACTGCTTTCATGATAATGA
GGCTCTTACCTTGGAAGAAGAATCTACTATCCTTTCGGCTGTTCCAAATT
TTCATCATTGGGCAACCACCCATTCTAGTGGCGTAAAAATGgaacagtat
ttcttgaattctGGCAACTCGCCACGAAATATCATCGTTTGTGCTCTCAA
CGAGTATTTGTTCGAGTCTTTTGACACCttaaatttggtgaaaaatacCT
TAGCACTTGTATTGGCTAAAAAATACCATATGGCGAAGCCTCCGTGTCAA
AATAAGAATCAGATCCGTCACCATGGGATTCGGAAGACTATTGACAGGCA
ATTACTTCTGGACCAATTGGGTTTGACTGATGATGATTTTGAGCAAACAA
ATATTCCATCCGAAAACATATATCCGAAGTTTAAATCTCATTTATATAAT
AATGGGACGATATTATGGAGAGATTATACAGAACATACTCAAACAATTGT
TATGAATGATTATAATACAGACACCGGTATGGATGATCAAAATGAGAGAG
AAAAGGATCCTAACGATTTCGATGTGCAAAACATGGCATCTAACATCACT
GACTTGCTAAAACGCTGCTACAGAGCTACTTGCTATGATGCAATTTTTCA
AGAAGCTATTAAGAATgcaattttgaatgaaaagaatGGCACGCCTCAGC
TTCTATCTGGAGAAAAGCAATTGTTAAATCTTGCGACCTATTCTCGCTGT
ACTGATGCCATATTGTATGTTATGCCATTGATATTCAACATTGAAGGACG
GAATTTATTGTATTTAAGATGCTTTGAAAGAGGACTTTGCAACAACTTTC
TGAAATCTAATTGGCGAATTATATTCAAAGAATTGGTGGAGATGCATGAT
ATCCAGGATTGCTTTATACTACACATTTTCAATGATTGGGATGTAATGGC
AGCTTATAATCATAGAATATCGAAATCAAAAAAAGCAGGGCAGGTAGAAG
AAAAAAACTCGAAAATATTCAAGAAATTGTGCACATCAAACAAAGAATCC
ATCAAAAACCTTTTTCCGTTTGCACATGCCATCATGAAGAAATCCTTCGA
AGAGCGATCACCAGGGTTCATTGTATTTTGTCAACGAAAGGCCAAATTTT
GTAGATCTGATCCATGGGATAAAGAAAACagctttttaaaagtCGAAGGT
CTCGGAGATCAATCCAGCCTACCGAAAATGATCCGTGACTACATGACGAA
CCGTGAGGAACAAAAAGAAACAATATTTAACATCTACGACTGCTTTCATG
ATAATGAGGCTCTTACCTTGGAAGAAGAATCTACTATCCTTTCGGCTGTT
CCAAATTTTCATCATTGGGCAACCACCCATTCTAGTGGCGTAAAAATGga
acagtatttcttgaattctGGCAACTCGCCACGAAATATCATCGTTTGTG
CTCTCAACGAGTATTTGTTCGAGTCTTTTGACACCttaaatttggtgaaa
aatacCTTAGCACTTGTATTGGCTAAAAAATACCATATGGCGAAGCCTCC
GTGTCAAAATAAGAATCAGATCCGTCACCATGGGATTCGGAAGACTATTG
ACAGGCAATTACTTCTGGACCAATTGGGTTTGACTGATGATGATTTTGAG
CAAACAAATATTCCATCCGAAAACATATATCCGAAGTTTAAATCTCATTT
ATATAATAATGGGACGATATTATGGAGAGATTATACAGAACATACTCAAA
CAATTGTTATGAATGATTATAATACAGACACCGGTATGGATGATCAAAAT
GAGAGAGAAAAGGATCCTAACGATTTCGATGTGCAAAACATGGCATCTAA
CATCACTGACTTGCTAAAACGCTGCTACAGAGCTACTTGCTATGATGCAA
TTTTTCAAGAAGCTATTAAGAATgcaattttgaatgaaaagaatGGCACG
CCTCAGCTTCTATCTGGAGAAAAGCAATTGTTAAATCTTGCGACCTATTC
TCGCTGTACTGATGCCATATTGTATGTTATGCCATTGATATTCAACATTG
AAGGACGGAATTTATTGTATTTAAGATGCTTTGAAAGAGGACTTTGCAAC
AACTTTCTGAAATCTAATTGGCGAATTATATTCAAAGAATTGGTGGAGAT
GCATGATATCCAGGATTGCTTTATACTACACATTTTCAATGATTGGGATG
TAATGGCAGCTTATAATCATAGAATATCGAAATCAAAAAAAGCAGGGCAG
GTAGAAGAAAAAAACTCGAAAATATTCAAGAAATTGTGCACATCAAACAA
AGAATCCATCAAAAACCTTTTTCCGTTTGCACATGCCATCATGAAGAAAT
CCTTCGAAGAGCGATCACCAGGGTTCATTGTATTTTGTCAACGAAAGGCC
AAATTTTGTAGATCTGATCCATGGGATAAAGAAAACagctttttaaaagt
CGAAGGTCTCGGAGATCAATCCAGCCTACCGAAAATGATCCGTGACTACA
TGACGAACCGTGAGGAACAAAAAGAAACAATATTTAACATCTACGACTGC
TTTCATGATAATGAGGCTCTTACCTTGGAAGAAGAATCTACTATCCTTTC
GGCTGTTCCAAATTTTCATCATTGGGCAACCACCCATTCTAGTGGCGTAA
AAATGgaacagtatttcttgaattctGGCAACTCGCCACGAAATATCATC
GTTTGTGCTCTCAACGAGTATTTGTTCGAGTCTTTTGACACCttaaattt
ggtgaaaaatacCTTAGCACTTGTATTGGCTAAAAAATACCATATGGCGA
AGCCTCCGTGTCAAAATAAGAATCAGATCCGTCACCATGGGATTCGGAAG
ACTATTGACAGGCAATTACTTCTGGACCAATTGGGTTTGACTGATGATGA
TTTTGAGCAAACAAATATTCCATCCGAAAACATATATCCGAAGTTTAAAT
CTCATTTATATAATAATGGGACGATATTATGGAGAGATTATACAGAACAT
ACTCAAACAATTGTTATGAATGATTATAATACAGACACCGGTATGGATGA
TCAAAATGAGAGAGAAAAGGATCCTAACGATTTCGATGTGCAAAACATGG
CATCTAACATCACTGACTTGCTAAAACGCTGCTACAGAGCTACTTGCTAT
GATGCAATTTTTCAAGAAGCTATTAAGAATgcaattttgaatgaaaagaa
tGGCACGCCTCAGCTTCTATCTGGAGAAAAGCAATTGTTAAATCTTGCGA
CCTATTCTCGCTGTACTGATGCCATATTGTATGTTATGCCATTGATATTC
AACATTGAAGGACGGAATTTATTGTATTTAAGATGCTTTGAAAGAGGACT
TTGCAACAACTTTCTGAAATCTAATTGGCGAATTATATTCAAAGAATTGG
TGGAGATGCATGATATCCAGGATTGCTTTATACTACACATTTTCAATGAT
TGGGATGTAATGGCAGCTTATAATCATAGAATATCGAAATCAAAAAAAGC
AGGGCAGGTAGAAGAAAAAAACTCGAAAATATTCAAGAAATTGTGCACAT
CAAACAAAGAATCCATCAAAAACCTTTTTCCGTTTGCACATGCCATCATG
AAGAAATCCTTCGAAGAGCGATCACCAGGGTTCATTGTATTTTGTCAACG
AAAGGCCAAATTTTGTAGATCTGATCCATGGGATAAAGAAAACagctttt
taaaagtCGAAGGTCTCGGAGATCAATCCAGCCTACCGAAAATGATCCGT
GACTACATGACGAACCGTGAGGAACAAAAAGAAACAATATTTAACATCTA
CGACTGCTTTCATGATAATGAGGCTCTTACCTTGGAAGAAGAATCTACTA
TCCTTTCGGCTGTTCCAAATTTTCATCATTGGGCAACCACCCATTCTAGT
GGCGTAAAAATGgaacagtatttcttgaattctGGCAACTCGCCACGAAA
TATCATCGTTTGTGCTCTCAACGAGTATTTGTTCGAGTCTTTTGACACCt
taaatttggtgaaaaatacCTTAGCACTTGTATTGGCTAAAAAATACCAT
ATGGCGAAGCCTCCGTGTCAAAATAAGAATCAGATCCGTCACCATGGGAT
TCGGAAGACTATTGACAGGCAATTACTTCTGGACCAATTGGGTTTGACTG
ATGATGATTTTGAGCAAACAAATATTCCATCCGAAAACATATATCCGAAG
TTTAAATCTCATTTATATAATAATGGGACGATATTATGGAGAGATTATAC
AGAACATACTCAAACAATTGTTATGAATGATTATAATACAGACACCGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037612XLOC_037612Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059785-proteinTCONS_00059785-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059785-exon-scaffold_331-1491911889:202969..203294TCONS_00059785-exon-scaffold_331-1491911889:202969..203294Clytia hemisphaericaexon
TCONS_00059785-exon-scaffold_331-1510915933:202969..203294TCONS_00059785-exon-scaffold_331-1510915933:202969..203294Clytia hemisphaericaexon
TCONS_00059785-exon-scaffold_331-1575043694:202969..203294TCONS_00059785-exon-scaffold_331-1575043694:202969..203294Clytia hemisphaericaexon
TCONS_00059785-exon-scaffold_331-1491911889:203488..203528TCONS_00059785-exon-scaffold_331-1491911889:203488..203528Clytia hemisphaericaexon
TCONS_00059785-exon-scaffold_331-1510915933:203488..203528TCONS_00059785-exon-scaffold_331-1510915933:203488..203528Clytia hemisphaericaexon
TCONS_00059785-exon-scaffold_331-1575043694:203488..203528TCONS_00059785-exon-scaffold_331-1575043694:203488..203528Clytia hemisphaericaexon
TCONS_00059785-exon-scaffold_331-1491911889:203851..204103TCONS_00059785-exon-scaffold_331-1491911889:203851..204103Clytia hemisphaericaexon
TCONS_00059785-exon-scaffold_331-1510915933:203851..204103TCONS_00059785-exon-scaffold_331-1510915933:203851..204103Clytia hemisphaericaexon
TCONS_00059785-exon-scaffold_331-1575043694:203851..204103TCONS_00059785-exon-scaffold_331-1575043694:203851..204103Clytia hemisphaericaexon
TCONS_00059785-exon-scaffold_331-1491911889:204242..204411TCONS_00059785-exon-scaffold_331-1491911889:204242..204411Clytia hemisphaericaexon
TCONS_00059785-exon-scaffold_331-1510915933:204242..204411TCONS_00059785-exon-scaffold_331-1510915933:204242..204411Clytia hemisphaericaexon
TCONS_00059785-exon-scaffold_331-1575043694:204242..204411TCONS_00059785-exon-scaffold_331-1575043694:204242..204411Clytia hemisphaericaexon
TCONS_00059785-exon-scaffold_331-1491911889:204580..204772TCONS_00059785-exon-scaffold_331-1491911889:204580..204772Clytia hemisphaericaexon
TCONS_00059785-exon-scaffold_331-1510915933:204580..204772TCONS_00059785-exon-scaffold_331-1510915933:204580..204772Clytia hemisphaericaexon
TCONS_00059785-exon-scaffold_331-1575043694:204580..204772TCONS_00059785-exon-scaffold_331-1575043694:204580..204772Clytia hemisphaericaexon
TCONS_00059785-exon-scaffold_331-1491911889:204907..205294TCONS_00059785-exon-scaffold_331-1491911889:204907..205294Clytia hemisphaericaexon
TCONS_00059785-exon-scaffold_331-1510915933:204907..205294TCONS_00059785-exon-scaffold_331-1510915933:204907..205294Clytia hemisphaericaexon
TCONS_00059785-exon-scaffold_331-1575043694:204907..205294TCONS_00059785-exon-scaffold_331-1575043694:204907..205294Clytia hemisphaericaexon
TCONS_00059785-exon-scaffold_331-1491911889:205851..205981TCONS_00059785-exon-scaffold_331-1491911889:205851..205981Clytia hemisphaericaexon
TCONS_00059785-exon-scaffold_331-1510915933:205851..205981TCONS_00059785-exon-scaffold_331-1510915933:205851..205981Clytia hemisphaericaexon
TCONS_00059785-exon-scaffold_331-1575043694:205851..205981TCONS_00059785-exon-scaffold_331-1575043694:205851..205981Clytia hemisphaericaexon
TCONS_00059785-exon-scaffold_331-1491911889:206142..206228TCONS_00059785-exon-scaffold_331-1491911889:206142..206228Clytia hemisphaericaexon
TCONS_00059785-exon-scaffold_331-1510915933:206142..206228TCONS_00059785-exon-scaffold_331-1510915933:206142..206228Clytia hemisphaericaexon
TCONS_00059785-exon-scaffold_331-1575043694:206142..206228TCONS_00059785-exon-scaffold_331-1575043694:206142..206228Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_331supercontigscaffold_331:202969..206228 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	1.49078	0.969435	1.35515	0.869518	0.678375	1.25358	1.97951	0.779928	0.420039	0.39064	0	0	0	0	0.0546574	0	0	0	0	0	1.72362	1.46138	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059785 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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