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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059704 ID=TCONS_00059704|Name=TCONS_00059704|organism=Clytia hemisphaerica|type=transcript|length=404bp
CATAGATATTTTGGTGTATGTCCTCATCCAATGTTTGCAAACAAGACAAT
TCTTCACCCTCATTTCTAATCCCTACCACTCCATCAGATAATTCACGACA
CAAGACACGACTCACAATAAATGATTCGCAAGAGGTTTGGATTAACACAT
GGAAGAAACTCTGTCATTCACTGCAAAACGAAGAGCTTAATAGTTGTAAT
GCCTATTACAAGgTTGGACAATGGATTTGGGATCACGTGACCTGTGATTA
TTCCAAACGAACTTCTCCTGTACTCAAGTGATTTTCTTCAAAGATTGTAA
CGAGCCTCCCTTATTGGTAAAGTCTTGGTAAAGTGGTACaagtcaatcat
ttttaatcGTTTACATTTTATCTCAAATTTGATATGCATGGTTTTAAGAG
gaca Run BLAST on NCBI transcript from alignment at scaffold_330:427867..429281+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059704 ID=TCONS_00059704|Name=TCONS_00059704|organism=Clytia hemisphaerica|type=transcript|length=1415bp|location=Sequence derived from alignment at scaffold_330:427867..429281+ (Clytia hemisphaerica)
CATAGATATTTTGGTGTATGTCCTCATCCAATGTTTGCAAACAAGACAAT
TCTTCACCCTCATTTCTAATCCCTACCACTCCATCAGATAATTCACGACA
CAAGACACGACTCACAATAAATGGTATTAGAAAATTTACACTCATTTCAC
CATTATGACAGAAATTGGTGTTTTTAATGGAGAACGGTGAATTCTCCAAC
AAACTCGTTGAGCTTTTTCGCGATTTCTATTGCTATCTGCTTTGAATCAC
ACATCTTTAGTCTTTAATCAAAAACTTGATCGACATATTTGTTTTCCCCT
TGCTTTAGATTCGCAAGAGGTTTGGATTAACACATGGAAGAAACTCTGTC
ATTCACTGCAAAACGAAGAGCTTAATAGTTGTAATGCCTATTACAAGGTA
TCTTTGAATCATATTTGCAAGcatcagaaaattattttgcaaaaagtCAG
TGTTGCAACTTTACCGTCTGTAGACGGAAATCCGTCCAGCTGAGATACAC
TATTTCCGTCCTTTCAGCagtaatgatttttttcaaaggaCTCACTAAAC
CAAAGATTTTTAACAAATTCCGTCCATAGTTACAAAACCTGGTTGCAACA
Ctgaaaaagtgcatttttgaaaaatactcaaattctttttgaaattacag
aaaaaaagaagaaaaaatcacaaaaaaaattcataacagCGAAAAGTCtt
cttcaaaatattaaaagtttGCAGAATTTTAGATAAGCGCGTGAAACCTG
AAAATGTCAATATTCTAAAgtgtaaattgatttttaaagtaATTTATATT
TATACGTTACGCATAAGCTTTTGTTTTGCAGGAAGGCAAGGAGATAATGA
TCTACCATCGCGGTCACCAACAAGCTCAAGTAAGGTTGTCATTTTGTATA
GCCACTGTCGATtgttttttaagagttttatcttaatattttaaggaaaa
atatgAGCCTAATCAAGAAATCTGATAGACCAGGCAGGATAAACATGTTT
GTTATTTCAGAATGAAATTTTAATCGTACGTCAATTAAACGAGCTTGGGC
AGTTGTCTTCAAAATTCTAAATAGCAAACTGCATAAAATTATATACTTGA
GAAATTTTGATATGATTTGAGCAGTAAAATTCATTTGGTATAGGTTTGCA
GTCTTCAAAATTATGACCCATGCAGCTTGAATTAAAAGTCAACAAATTGA
AGAgtcgtttttgttgttttaaggTTGGACAATGGATTTGGGATCACGTG
ACCTGTGATTATTCCAAACGAACTTCTCCTGTACTCAAGTGATTTTCTTC
AAAGATTGTAACGAGCCTCCCTTATTGGTAAAGTCTTGGTAAAGTGGTAC
aagtcaatcatttttaatcGTTTACATTTTATCTCAAATTTGATATGCAT
GGTTTTAAGAGgaca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059704-exon-scaffold_330-1491911889:427867..427989 | TCONS_00059704-exon-scaffold_330-1491911889:427867..427989 | Clytia hemisphaerica | exon |
| TCONS_00059704-exon-scaffold_330-1510915933:427867..427989 | TCONS_00059704-exon-scaffold_330-1510915933:427867..427989 | Clytia hemisphaerica | exon |
| TCONS_00059704-exon-scaffold_330-1575043694:427867..427989 | TCONS_00059704-exon-scaffold_330-1575043694:427867..427989 | Clytia hemisphaerica | exon |
| TCONS_00059704-exon-scaffold_330-1491911889:428175..428263 | TCONS_00059704-exon-scaffold_330-1491911889:428175..428263 | Clytia hemisphaerica | exon |
| TCONS_00059704-exon-scaffold_330-1510915933:428175..428263 | TCONS_00059704-exon-scaffold_330-1510915933:428175..428263 | Clytia hemisphaerica | exon |
| TCONS_00059704-exon-scaffold_330-1575043694:428175..428263 | TCONS_00059704-exon-scaffold_330-1575043694:428175..428263 | Clytia hemisphaerica | exon |
| TCONS_00059704-exon-scaffold_330-1491911889:429090..429281 | TCONS_00059704-exon-scaffold_330-1491911889:429090..429281 | Clytia hemisphaerica | exon |
| TCONS_00059704-exon-scaffold_330-1510915933:429090..429281 | TCONS_00059704-exon-scaffold_330-1510915933:429090..429281 | Clytia hemisphaerica | exon |
| TCONS_00059704-exon-scaffold_330-1575043694:429090..429281 | TCONS_00059704-exon-scaffold_330-1575043694:429090..429281 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_330 | supercontig | scaffold_330:427867..429281 + |
Blast
The following BLAST results are available for this feature:
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