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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059637 ID=TCONS_00059637|Name=TCONS_00059637|organism=Clytia hemisphaerica|type=transcript|length=1457bp
GGAGAAGAGAAAGTCATTTGTAAAAAGAGCATTTTGAACTTCCGAAACGA
GATCGCAGTGTAGTTtaagcccgaaaacctgggctacTGGGTATTTTTTA
TATGTACCATTGTGATgttttctgacattacatcacggacctaATAGCTG
ATTGGCAGTAAGTGAtataaaatcagtcaatacgatACTTTCAACTATCA
GCTGTTGgatccgtggaagacattgcaacggtgtatatcatgaattctaC
TGGGGGTATGCATTATATTTCTATCGTTTCGCCTTTACAGTTATATCTGC
TGTAAAAATCCAATGATAAAAACGTCCAAAATTATCACTTGGTTTAAAGA
AAGACGGAAACGCAATATCAAATAACATCAAATCATCAATGGATTTCTTA
CCAAACGAAATATTGTATAAAATTGTCAAATATTTGTGCATCAAAGACAC
CAAAAACATATCAGAGACATCACAAAGACTGTACGATAATACTTTAGAAC
AAATATGGTCAACACCAAGATTCCATGGCAACCGAAATGGTCGACCCTTC
TTGGAGAAAATATCCGAATTTCCGATAAAAGAGTTGCATACAAGTGATTT
CAATAGCTGTTGTTCtgaaatcattgaaattataCCTGATATTGAACTTT
TGCACATCGATAATGAAGCTAGAGACACATTCTCAAATATTGCGGAGGAA
TTATGCTCCATTGAGATACCGGTTGTTCTCCACACTAAAGCTTTAGGCAT
GGAAACTAGTGAAGATTTTGATTACTTTGTAGAGGAAATTGTTGGATCTT
GTCCAATCAGCGAGCTTATTATTGATCACGTGGTCCAGCCTTGGGAAAAG
CCTGGGAGAGCATGGACTACCAAACAATTTGACTTGATTAGTGATAAAGT
CTTTATCGGTGAACTATCGCTTAACAGTTTCTCGATTCCCGATTTTGATG
ACTTTTTCATGGTATTGTGTAAATTGAATAATGCTAACGTCCGTATTTCA
AATGCATCGAATTATCATCGTCTATTAACGATCCAAGGCTTGGATATgtt
gaaaatgaagaacatTAAAGTACAGTATGTTAGAAATGGTTTTGAAATAC
CTATTGCATTTTAGACTTCTGTATGAGTTCCAAAGGCCATCTATTTTTGA
TAATGCGATATATTCCACAGGGCGaaataaatatgatatttccatatact
tttgtaaatatggaaatatgacttttctatttccaaagttgtggaaatac
catatttcatgatatttccaaatctgaaacatcatattttcaaaatattt
ccaacttttagaaatatgatatttatgattattttcaagatatttccagc
attggaaatctcttatttcgcccagtgttcTTTCTCTATATAGTATTTTA
TCTTTTCGTACATAACAATATATTAGCtttgactttgaaaaaaatattcg
atCCTCC Run BLAST on NCBI protein sequence of TCONS_00059637-protein >TCONS_00059637-protein ID=TCONS_00059637-protein|Name=TCONS_00059637-protein|organism=Clytia hemisphaerica|type=polypeptide|length=241bp
MDFLPNEILYKIVKYLCIKDTKNISETSQRLYDNTLEQIWSTPRFHGNRN
GRPFLEKISEFPIKELHTSDFNSCCSEIIEIIPDIELLHIDNEARDTFSN
IAEELCSIEIPVVLHTKALGMETSEDFDYFVEEIVGSCPISELIIDHVVQ
PWEKPGRAWTTKQFDLISDKVFIGELSLNSFSIPDFDDFFMVLCKLNNAN
VRISNASNYHRLLTIQGLDMLKMKNIKVQYVRNGFEIPIAF Run BLAST on NCBI transcript from alignment at scaffold_329:607482..608938 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059637 ID=TCONS_00059637|Name=TCONS_00059637|organism=Clytia hemisphaerica|type=transcript|length=1457bp|location=Sequence derived from alignment at scaffold_329:607482..608938 (Clytia hemisphaerica)
GGAGGatcgaatatttttttcaaagtcaaaGCTAATATATTGTTATGTAC
GAAAAGATAAAATACTATATAGAGAAAgaacactgggcgaaataagagat
ttccaatgctggaaatatcttgaaaataatcataaatatcatatttctaa
aagttggaaatattttgaaaatatgatgtttcagatttggaaatatcatg
aaatatggtatttccacaactttggaaatagaaaagtcatatttccatat
ttacaaaagtatatggaaatatcatatttatttCGCCCTGTGGAATATAT
CGCATTATCAAAAATAGATGGCCTTTGGAACTCATACAGAAGTCTAAAAT
GCAATAGGTATTTCAAAACCATTTCTAACATACTGTACTTTAatgttctt
cattttcaacATATCCAAGCCTTGGATCGTTAATAGACGATGATAATTCG
ATGCATTTGAAATACGGACGTTAGCATTATTCAATTTACACAATACCATG
AAAAAGTCATCAAAATCGGGAATCGAGAAACTGTTAAGCGATAGTTCACC
GATAAAGACTTTATCACTAATCAAGTCAAATTGTTTGGTAGTCCATGCTC
TCCCAGGCTTTTCCCAAGGCTGGACCACGTGATCAATAATAAGCTCGCTG
ATTGGACAAGATCCAACAATTTCCTCTACAAAGTAATCAAAATCTTCACT
AGTTTCCATGCCTAAAGCTTTAGTGTGGAGAACAACCGGTATCTCAATGG
AGCATAATTCCTCCGCAATATTTGAGAATGTGTCTCTAGCTTCATTATCG
ATGTGCAAAAGTTCAATATCAGGtataatttcaatgatttcaGAACAACA
GCTATTGAAATCACTTGTATGCAACTCTTTTATCGGAAATTCGGATATTT
TCTCCAAGAAGGGTCGACCATTTCGGTTGCCATGGAATCTTGGTGTTGAC
CATATTTGTTCTAAAGTATTATCGTACAGTCTTTGTGATGTCTCTGATAT
GTTTTTGGTGTCTTTGATGCACAAATATTTGACAATTTTATACAATATTT
CGTTTGGTAAGAAATCCATTGATGATTTGATGTTATTTGATATTGCGTTT
CCGTCTTTCTTTAAACCAAGTGATAATTTTGGACGTTTTTATCATTGGAT
TTTTACAGCAGATATAACTGTAAAGGCGAAACGATAGAAATATAATGCAT
ACCCCCAGtagaattcatgatatacaccgttgcaatgtcttccacggatc
CAACAGCTGATAGTTGAAAGTatcgtattgactgattttataTCACTTAC
TGCCAATCAGCTATtaggtccgtgatgtaatgtcagaaaacATCACAATG
GTACATATAAAAAATACCCAgtagcccaggttttcgggcttaAACTACAC
TGCGATCTCGTTTCGGAAGTTCAAAATGCTCTTTTTACAAATGACTTTCT
CTTCTCC Coding sequence (CDS) from alignment at scaffold_329:607482..608938 >TCONS_00059637 ID=TCONS_00059637|Name=TCONS_00059637|organism=Clytia hemisphaerica|type=CDS|length=726bp|location=Sequence derived from alignment at scaffold_329:607482..608938 (Clytia hemisphaerica)
CTAAAATGCAATAGGTATTTCAAAACCATTTCTAACATACTGTACTTTAa
tgttcttcattttcaacATATCCAAGCCTTGGATCGTTAATAGACGATGA
TAATTCGATGCATTTGAAATACGGACGTTAGCATTATTCAATTTACACAA
TACCATGAAAAAGTCATCAAAATCGGGAATCGAGAAACTGTTAAGCGATA
GTTCACCGATAAAGACTTTATCACTAATCAAGTCAAATTGTTTGGTAGTC
CATGCTCTCCCAGGCTTTTCCCAAGGCTGGACCACGTGATCAATAATAAG
CTCGCTGATTGGACAAGATCCAACAATTTCCTCTACAAAGTAATCAAAAT
CTTCACTAGTTTCCATGCCTAAAGCTTTAGTGTGGAGAACAACCGGTATC
TCAATGGAGCATAATTCCTCCGCAATATTTGAGAATGTGTCTCTAGCTTC
ATTATCGATGTGCAAAAGTTCAATATCAGGtataatttcaatgatttcaG
AACAACAGCTATTGAAATCACTTGTATGCAACTCTTTTATCGGAAATTCG
GATATTTTCTCCAAGAAGGGTCGACCATTTCGGTTGCCATGGAATCTTGG
TGTTGACCATATTTGTTCTAAAGTATTATCGTACAGTCTTTGTGATGTCT
CTGATATGTTTTTGGTGTCTTTGATGCACAAATATTTGACAATTTTATAC
AATATTTCGTTTGGTAAGAAATCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059637-exon-scaffold_329-1491911889:607482..608938 | TCONS_00059637-exon-scaffold_329-1491911889:607482..608938 | Clytia hemisphaerica | exon |
| TCONS_00059637-exon-scaffold_329-1510915933:607482..608938 | TCONS_00059637-exon-scaffold_329-1510915933:607482..608938 | Clytia hemisphaerica | exon |
| TCONS_00059637-exon-scaffold_329-1575043694:607482..608938 | TCONS_00059637-exon-scaffold_329-1575043694:607482..608938 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_329 | supercontig | scaffold_329:607482..608938 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
Blast
The following BLAST results are available for this feature:
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