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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059635 ID=TCONS_00059635|Name=TCONS_00059635|organism=Clytia hemisphaerica|type=transcript|length=1060bp
AAAACAACAATCATAATGGCTGATTGTTCAGTTGAATGGGCTCCACGTGG
CTTACCCATTTTCACATTAACAACGTCAGCTTTAATATCAACCATTTCCG
TAATCAGTAATGTTGCCATCGTTGTTGCATTCATTAAAGATCCTTTAAAA
AAGCTTCATACACCGTTCAATTACTTCATCATCAGCTTATCAGCTAGTGA
TCTCATTACCGGATTTGTTGTAATGCCGATCTCCATGACAACACATTATC
TGGAAAGTCAACGTACCATCGATGCGAGCGCACGCTACGCTATACGTATC
TCATACTTGATTGCGTCGACGGGGAGTACGTTAAGTATTATTGCATTATC
GGTAGATCGCTTTGCTGCAATAGAATGGCCGATGCGCTATCGACAAAACA
TCGGCTATGTCAAATGCATTATTGtcacaattgcattatgggtaATTGCC
GTTTCATTAccatttctttatttcttgatcGGTTACCGTAACTATTTAAT
GGTGCACGCAAATTTATCGCTTGTTCTCGGTATCGGcttacttttcatca
tttacGTCCGTGTTTATTTGTATTTACGAAAGAATTCACAAGATTTACGA
AAGAATCTACAGTTAACATCCTCAGTTGCGAGAGACTTCGATTTGAAGAG
AATGTTGGTCGAAAAGAAAGCGACGCGTACTTTTTTAGTTATTCTACTTC
TCTACGTAGTGACGTATCTACCCGCCGTCATTTTTATCTACATCATCTTC
TTTTGTAAGAATTGCACGTGTGATTTTATTCATGTGATTAGAGATACTCA
ATTCTTATTGGTTGCTTCCAACAGTTGTGTCAATGCTTTCGTGTGTACTT
TTCGAATCAAACATTTTCGGCAAAGTATACGGATCGTGTTTACAAGGAAC
GGGCGTAAAGTTTCAGACCTTAACTTACAATCGACAAGCCATTCAATGGT
AATATCGCCTGCTAAAAGCCGCCTTCCAAACAATAATACAGAAATGAGAA
TAAACAGATAATTATTATGGGATGACTACTACGACATCAAAAACTGGGGA
ATAAACCGCT Run BLAST on NCBI protein sequence of TCONS_00059635-protein >TCONS_00059635-protein ID=TCONS_00059635-protein|Name=TCONS_00059635-protein|organism=Clytia hemisphaerica|type=polypeptide|length=336bp
KTTIIMADCSVEWAPRGLPIFTLTTSALISTISVISNVAIVVAFIKDPLK
KLHTPFNYFIISLSASDLITGFVVMPISMTTHYLESQRTIDASARYAIRI
SYLIASTGSTLSIIALSVDRFAAIEWPMRYRQNIGYVKCIIVTIALWVIA
VSLPFLYFLIGYRNYLMVHANLSLVLGIGLLFIIYVRVYLYLRKNSQDLR
KNLQLTSSVARDFDLKRMLVEKKATRTFLVILLLYVVTYLPAVIFIYIIF
FCKNCTCDFIHVIRDTQFLLVASNSCVNAFVCTFRIKHFRQSIRIVFTRN
GRKVSDLNLQSTSHSMVISPAKSRLPNNNTEMRINR Run BLAST on NCBI transcript from alignment at scaffold_329:596687..597746 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059635 ID=TCONS_00059635|Name=TCONS_00059635|organism=Clytia hemisphaerica|type=transcript|length=1060bp|location=Sequence derived from alignment at scaffold_329:596687..597746 (Clytia hemisphaerica)
AGCGGTTTATTCCCCAGTTTTTGATGTCGTAGTAGTCATCCCATAATAAT
TATCTGTTTATTCTCATTTCTGTATTATTGTTTGGAAGGCGGCTTTTAGC
AGGCGATATTACCATTGAATGGCTTGTCGATTGTAAGTTAAGGTCTGAAA
CTTTACGCCCGTTCCTTGTAAACACGATCCGTATACTTTGCCGAAAATGT
TTGATTCGAAAAGTACACACGAAAGCATTGACACAACTGTTGGAAGCAAC
CAATAAGAATTGAGTATCTCTAATCACATGAATAAAATCACACGTGCAAT
TCTTACAAAAGAAGATGATGTAGATAAAAATGACGGCGGGTAGATACGTC
ACTACGTAGAGAAGTAGAATAACTAAAAAAGTACGCGTCGCTTTCTTTTC
GACCAACATTCTCTTCAAATCGAAGTCTCTCGCAACTGAGGATGTTAACT
GTAGATTCTTTCGTAAATCTTGTGAATTCTTTCGTAAATACAAATAAACA
CGGACgtaaatgatgaaaagtaagCCGATACCGAGAACAAGCGATAAATT
TGCGTGCACCATTAAATAGTTACGGTAACCgatcaagaaataaagaaatg
gTAATGAAACGGCAATtacccataatgcaattgtgaCAATAATGCATTTG
ACATAGCCGATGTTTTGTCGATAGCGCATCGGCCATTCTATTGCAGCAAA
GCGATCTACCGATAATGCAATAATACTTAACGTACTCCCCGTCGACGCAA
TCAAGTATGAGATACGTATAGCGTAGCGTGCGCTCGCATCGATGGTACGT
TGACTTTCCAGATAATGTGTTGTCATGGAGATCGGCATTACAACAAATCC
GGTAATGAGATCACTAGCTGATAAGCTGATGATGAAGTAATTGAACGGTG
TATGAAGCTTTTTTAAAGGATCTTTAATGAATGCAACAACGATGGCAACA
TTACTGATTACGGAAATGGTTGATATTAAAGCTGACGTTGTTAATGTGAA
AATGGGTAAGCCACGTGGAGCCCATTCAACTGAACAATCAGCCATTATGA
TTGTTGTTTT Coding sequence (CDS) from alignment at scaffold_329:596687..597746 >TCONS_00059635 ID=TCONS_00059635|Name=TCONS_00059635|organism=Clytia hemisphaerica|type=CDS|length=1011bp|location=Sequence derived from alignment at scaffold_329:596687..597746 (Clytia hemisphaerica)
TTATCTGTTTATTCTCATTTCTGTATTATTGTTTGGAAGGCGGCTTTTAG
CAGGCGATATTACCATTGAATGGCTTGTCGATTGTAAGTTAAGGTCTGAA
ACTTTACGCCCGTTCCTTGTAAACACGATCCGTATACTTTGCCGAAAATG
TTTGATTCGAAAAGTACACACGAAAGCATTGACACAACTGTTGGAAGCAA
CCAATAAGAATTGAGTATCTCTAATCACATGAATAAAATCACACGTGCAA
TTCTTACAAAAGAAGATGATGTAGATAAAAATGACGGCGGGTAGATACGT
CACTACGTAGAGAAGTAGAATAACTAAAAAAGTACGCGTCGCTTTCTTTT
CGACCAACATTCTCTTCAAATCGAAGTCTCTCGCAACTGAGGATGTTAAC
TGTAGATTCTTTCGTAAATCTTGTGAATTCTTTCGTAAATACAAATAAAC
ACGGACgtaaatgatgaaaagtaagCCGATACCGAGAACAAGCGATAAAT
TTGCGTGCACCATTAAATAGTTACGGTAACCgatcaagaaataaagaaat
ggTAATGAAACGGCAATtacccataatgcaattgtgaCAATAATGCATTT
GACATAGCCGATGTTTTGTCGATAGCGCATCGGCCATTCTATTGCAGCAA
AGCGATCTACCGATAATGCAATAATACTTAACGTACTCCCCGTCGACGCA
ATCAAGTATGAGATACGTATAGCGTAGCGTGCGCTCGCATCGATGGTACG
TTGACTTTCCAGATAATGTGTTGTCATGGAGATCGGCATTACAACAAATC
CGGTAATGAGATCACTAGCTGATAAGCTGATGATGAAGTAATTGAACGGT
GTATGAAGCTTTTTTAAAGGATCTTTAATGAATGCAACAACGATGGCAAC
ATTACTGATTACGGAAATGGTTGATATTAAAGCTGACGTTGTTAATGTGA
AAATGGGTAAGCCACGTGGAGCCCATTCAACTGAACAATCAGCCATTATG
ATTGTTGTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059635-exon-scaffold_329-1491911889:596687..597746 | TCONS_00059635-exon-scaffold_329-1491911889:596687..597746 | Clytia hemisphaerica | exon |
| TCONS_00059635-exon-scaffold_329-1510915933:596687..597746 | TCONS_00059635-exon-scaffold_329-1510915933:596687..597746 | Clytia hemisphaerica | exon |
| TCONS_00059635-exon-scaffold_329-1575043694:596687..597746 | TCONS_00059635-exon-scaffold_329-1575043694:596687..597746 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_329 | supercontig | scaffold_329:596687..597746 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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