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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059611 ID=TCONS_00059611|Name=TCONS_00059611|organism=Clytia hemisphaerica|type=transcript|length=326bp
gtaaaaaatgcTCAATAGATAGTTAAAACAATGTCATACAAGAGACCACA
AAAATAAGGAGAAAATTATGTCTAATCAAGACATTAAATTAATATCATCA
TTGCAAGCAAGGAAGAGGTATATTCTCTCAGAGCTTCAGCGTCTTGGTCA
TTAAAATTAGAAATATTGGATGTTATTGAAGTAGATTCTAAATCGTATGC
ATCCAAGAGATCAGCTATCAAATCCATATCTTCATCAAGACTTTCGTTTT
GTGATGTGTCATCATCGACTAGTTCGTAACGAGCAGGGAATGGTTGCTCT
TCCCAGTCCTGGTAGATGCTGAAGAA Run BLAST on NCBI transcript from alignment at scaffold_329:720994..722621- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059611 ID=TCONS_00059611|Name=TCONS_00059611|organism=Clytia hemisphaerica|type=transcript|length=1628bp|location=Sequence derived from alignment at scaffold_329:720994..722621- (Clytia hemisphaerica)
GTAAAAAATGCTCAATAGATAGTTAAAACAATGTCATACAAGAGACCACA
AAAATAAGGAGAAAATTATGTCTAATCAAGACATTAAATTAATATCATCA
TTGCAAGCAAGGAAGAGGTGTAAGTTACGTTCAAATCTTAATATTATTTT
TTCAATTCAAAAAAGCTAACGGACTACTGCATAAACATCAACTATCAAAC
GAATTATTTATAATTAAAAATCATTGTATAAATATTGACAATTAAAAACA
TTACCTAAGTAAAAGTGACTAAAATTATAAGTATTCTTTTAAGAGGAATT
AATTAAAATGTTAATTTTAAATAAAAATTTTGAACCCCTAAGCTAAGTCA
AGATTTGATTTCCTTTTTAAAATGTTCAGAAAGANTAAATAAAAATTCTG
AATCCCTAAGCTAAGTCAAGATTTCATTTCTTTTTTTAAATGTTCAGAAA
GATTCTTTAATTAGAACTTTTAATTTTGAAAACTTTTAAATTCCCTTAAT
GCAAAAGACACAGACGTATTCATGCAAATACTAATTTTTTGAAAATCCCG
AATATTGAAAGGTTACAACAAAAGTAATAAAGTCAACTCTTTCTAATTCG
AATCTCTATTATTCGATTCTTTCTATAATTCGAACTAAATATTGGTCCCC
TCAGCTGAGAAGTGATTTTCATTACTAAACTTTCTCTAATTCGAATACAG
TTTTTAGTCCCTTGAAGATCGATTTAGAGAGAGACAACTGTATTTGAAAG
CTTTCAACCAGCAGAACCTCATCATGGATTCTGTTTCAATTTTTCCAGAT
ATTCTCTCACAGAGTTTCTGCGTCTTGGTCATTAAAATTAGAAATGGTAG
CGAAAAACAAAACAAAAAAACTGTTTGAACTAATTATTGAAGGTTCAAGA
ACTCATCATAAATTCTGTTTCAATTTTTCCAGATATTCTCTCAGAGCTTC
AGCGTCTTGGTCATTAAAATTAGAAATATTGGATGTTATTGAAGTAGATT
CTAAATCGTATGCATCCAAGAGATCAGCTATCAAATCCATATCTTCATCA
AGACTTTCGTTTTGTGATGTGTCATCATCGACTAGTTCGTAACGAGCAGG
GAATGGTAATTGATTTAACAACTGTTCAGCTTCTTTTCGGTAATTGTTGT
ATGATTGTTTGGAATACACCAGTCTGAAGATGAAGGCAATCAAAATATAA
ATAATCTATTTTTCCAATAAACAGTTAAACTGAATCAACCCCTCCTCATC
AAATATTGATTTTCTCATAATCATTTTTAGCATTGGAAGCATTTTTCACT
TTTTTGCTTGAGCCAAGAAAGCTTAAGATCTAAATCTATCTTGGTCGTTA
ATCTATTTTTCCAATAAACAGTTAAACTGAATAAACCCCTCCTTATCAAA
TATTACTTTTCTCATAGCATTGGATATCTTCGCTTTTTGCTTGAGCCAAG
AAAGCTTAAGATTTAAGCTATCTTGGTCGTTGAGTTCAAAGAGATGAATT
TTCAGGCAAGTTTTTTTCGAAGGAAATGTTTACCTTGCGTACCTTACGAC
AGACGATGAAGTTTTATTGTTTGCTTTCGATTTTGCTTGTACAGGTTGCT
CTTCCCAGTCCTGGTAGATGCTGAAGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059611-exon-scaffold_329-1575043694:722503..722621 | TCONS_00059611-exon-scaffold_329-1575043694:722503..722621 | Clytia hemisphaerica | exon |
| TCONS_00059611-exon-scaffold_329-1575043694:721517..721689 | TCONS_00059611-exon-scaffold_329-1575043694:721517..721689 | Clytia hemisphaerica | exon |
| TCONS_00059611-exon-scaffold_329-1575043694:720994..721027 | TCONS_00059611-exon-scaffold_329-1575043694:720994..721027 | Clytia hemisphaerica | exon |
| TCONS_00059611-exon-scaffold_329-1510915933:722503..722621 | TCONS_00059611-exon-scaffold_329-1510915933:722503..722621 | Clytia hemisphaerica | exon |
| TCONS_00059611-exon-scaffold_329-1510915933:721517..721689 | TCONS_00059611-exon-scaffold_329-1510915933:721517..721689 | Clytia hemisphaerica | exon |
| TCONS_00059611-exon-scaffold_329-1510915933:720994..721027 | TCONS_00059611-exon-scaffold_329-1510915933:720994..721027 | Clytia hemisphaerica | exon |
| TCONS_00059611-exon-scaffold_329-1491911889:722503..722621 | TCONS_00059611-exon-scaffold_329-1491911889:722503..722621 | Clytia hemisphaerica | exon |
| TCONS_00059611-exon-scaffold_329-1491911889:721517..721689 | TCONS_00059611-exon-scaffold_329-1491911889:721517..721689 | Clytia hemisphaerica | exon |
| TCONS_00059611-exon-scaffold_329-1491911889:720994..721027 | TCONS_00059611-exon-scaffold_329-1491911889:720994..721027 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_329 | supercontig | scaffold_329:720994..722621 - |
Blast
The following BLAST results are available for this feature:
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