TCONS_00059602 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059602
Unique NameTCONS_00059602
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3225

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059602 ID=TCONS_00059602|Name=TCONS_00059602|organism=Clytia hemisphaerica|type=transcript|length=3225bp
TAGAAAATATGGAAGAGAATAATTTAAAACACAAAATCATGGATAATTTT
GCATCTTTGAGCAGGCATCCTGGTTCATCACCCTGCCCAAAACGTTTACC
TCCAAAGCCACCACCAAACTTCAAGAGAAGGAAAATAGAAGCTCCCCAAG
GAATGCATGGGCAAATGGTAGATGACTTCCTCAAGAAGACGCCATTAGAA
GAAGAGCGAGCAGCTGGGATGACATTACGCTTAACTCATCATCGTATCCA
AGGTACTTTGGAACCCAATGTTGCAGATTTCACTGTGAGAGAAGTGTGTC
AGGAAGCTCATAATAGACCCATGAGGCACATCCATTTCACCAATATGGAG
ATTGACAATCAGAAGCATCCAGAGAAACCATGTCCTATTGTTGACCCTGG
GTTAAAAGAGAGCATTGATGATTTGGCATTTGGTGCAGTTGATTATGCGA
AAGAAGTGCGATTCATGAAAAATGATCCCAAACAACGAGCTCTACACTGA
AAAAGACGAAACTGGCAACACTTGGATGGTCGCTAAACATAAAACTTCAG
AAGACACGATTAAAGAGCAAATAAAACAAGTATCAAAGCTATACTGTCAC
TTTGTGATATTCAGACAGAATGTTGACCCTTATGACATTGTAACTACACT
CTGtcgaaaattgcattttcaaaGACATGATTTTTCTTTACCCACAAAAT
TGAATTATCAAAATTCAACCATGGTACAGAAAGTCTCCGTTAGATTCAAA
CCAAGCGATTCTAGAGACCGCTTACTGCAATTGAACAATGAagtacaaaa
ttttaaaattgggaattgtattttgaaaaaacatggTAGATCTGGTTCTT
TAATTGGGAATCATTTTGAAGTAGTTATTCGCAATGTTTCCAACCCTTAT
GACTATTTTATAGAGGAAGTGTCTGAACATTGGGCTAAGACTGGTTTTAT
AAACTATTTTGGATTTGATTACTATGGCAGTGGCAAGGTAAATCTAGGAA
AATTCATGCTACACTGTGCTGATACTACTCTGCAAATGAAGCTTCCGAAT
AGAGAAAGACAATTCCATTTGAAAGCTTATCAAGCGGTCACTTGGAATAA
ATTTGCTTCCTATAGAATCAAACAATATGGATTACAGCCAATCATTGGTG
ATTTGGTTTTAACAAAAGGAAAAGACAGTACTGGAATATCAATCGTCAAA
TCCATAACTGCTGAGGATATCAACCAAAAACAATACACTGTTGAACAAGT
AGTTTTACCTTATCCTGGACACGGGTTGAAGTACCCTGAAAATTTGTGCT
TGAATTACATGTCAAACATCTTGCAACAGGATGGGATAGAATTGATCAAT
ATCCCACGGCGTAGAGGTGACATGAGTTTGATATGTGGGTATAGacCCAT
CATTTCAAAGCCTCAAAATGTAGAATGGGATCTGGTTTCATACGATGATC
CAACTCTTCCATTAATAGAAAACGATTATGAACATCTTTTCCGATTAGCT
GCTCACAATTTTAAATATAGAcagatgaaaattaaatatgagGAAGCCGT
ACGCAAGAAGACTTTAAATGGTGCAAGTGAGGCCATGTCGAAACCAGATA
ATGAAGAGTCTGGTACTAGTGGTCTCGAATGCAAAGAAACTGAAGAGAGT
GATGAAGACTTAGCCAAAGGTATTGATGTTGACGAGCTTTACCAAGGAAT
TGGTTTAGAATCTGAAGAACAACCTTCATCATCTGATGGTTTACCAGAAA
AACCACCTTCGTTCGAGTTTAGACCTCAACTTGGAGTTGAAAATGGACTG
TACAAAGCTCTTAGATTGAGATTTATGTTAAGCCAGGAGGCATTTGGTAC
TTCAGCTTTGAGAGAGATTATGAGTACTTGCCCACCTTATGATCCTGTCA
ACGTTTCGCAACCGCCCATACAAAGTTGTACTGCTCAAACATCGCTGCAG
AATCCTATTGCTCCCCTGTTGCAAGTGTCTACGGCTCAGCCATTGCCTGA
AAATCCTCAACCACCATTGCAAAACTATACTGCTCCACCATTGCTGATAA
ATCCTACTTCAACAACACCTCTGCGGAATCCTACCGCTCCACTAAtagta
aaaaatgctgtcactcAACCGATGCAACAAAGTCTTACTGTTCTACCACT
ACTGCAAAATCCCACTGCTAAACCACTTTTAATTAATCCTGCTGCTCAAC
CACTGGTGCGGCCATTAGTGCGGATTCTTACTGCTCCGCCAGTCCTTCCC
ACCCCAAGACTGCTACATAATCCTACTGTTCAACTGGTTCAACCACTACA
GAAAAGCCATAATATTCTACCACTACAGCAAATTCCTACCCCTCCACCAA
ATCTACTAAACCCTATCCAGATTCTTGTCGCTCAACCACCTCCGCAAAAC
GCTCCTGCTCCAACACTGCTGCTAAATCCTACAGCTCAACCAACTCTACC
GAACCCTATCGCTCCACCACCATTGAGAAACCATATCGCTCCACCATCGC
TGCTGAACCCTACCCCTCCACCATCCCTGCAGAATACTACCCCTTTACCT
CCGCTGCAGAGTTCTACAATTCAACCACTGATGGACATTTCTACAACTCA
ACCACCTCTGCGGAATCCTACCTCTCAACCATCTCTGCGGAATTTTAACA
GGCCAACATTGTCACAAAATCCTAACAGGCCACTATTTCTACGTAATCCT
ATCAGACCACCTCTTCTTACAAATCCTAATGGGCCACCATTACTACCAAA
CCCTAATGGGCCACCATTACTACCAAACCCTAATGGGCCACCATTACTAC
CAAACCCTAATGGGCCACCATTGCTACCAAATCCTAATAGGCCACCATTG
CTACTAAATCCTAATGGGCCAGCACTACTACCAAATCCTAATGGGCCACC
ACTACTACCAATTCCTAATGGACCACCACTACTACCAATTCCTAATGGAC
CACCACTACTACCAAATCCTAACGGGCCACCACTGCTACCTAATCCTAAT
GGACCTCAACCGCAAAATCTTCCTATTCCTGATGAAAGAATATATCTTCA
GGATAGGTTTAGTGATGAACTAGTAGCACCTATAGGTTTTAGTCAACCAT
CATCAAACCCGCCTTCATTAATGGAAATCGAAATAAAAGATCATTTTTAC
AAATAATACTTCTGTTGTTATAAAGCCTCTTAATTATCTTGGTTGAAAAA
TCAACCTGTAAATATGTAAACTGCA
Run BLAST on NCBI

transcript from alignment at scaffold_329:572732..578042-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059602 ID=TCONS_00059602|Name=TCONS_00059602|organism=Clytia hemisphaerica|type=transcript|length=5311bp|location=Sequence derived from alignment at scaffold_329:572732..578042- (Clytia hemisphaerica)
TAGAAAATATGGAAGAGAATAATTTAAAACACAAAATCATGGATAATTTT
GCATCTTTGAGCAGGCATCCTGGTTCATCACCCTGCCCAAAACGTTTACC
TCCAAAGGTTAAATTTCTATCTAGATTCTATATTTCTTGAACAAGTCTTT
TTAATTACTAAATGAAAATGTGAAAACCTCAAAAAGCTGTAAGCTTAGTT
CGGGTTTTGATTGATGAATTTTTCATTGTTTGTAACTTTCTTTCACAAAC
TTTGAACCTCTGATGTAAGCAAACTTGTAAACTACCTCAGATTTTTGAGT
TTTTATCGGGGTGCAACAACGTCAAACATTTAACAATTGTCTGAGTTTTT
TATACTGACACTCTCACAGGTGTATACTTTTATAATTCACTCCTTTTGAC
ATCCACCCTAAAGCGAACTAAAACCAAACTGTTTGTCAAATTAAGGTTGA
TACTATGTTTCCCAAACTACTTTCAGCCACCACCAAACTTCAAGAGAAGG
AAAATAGAAGCTCCCCAAGGAATGCATGGGCAAATGGTAGATGACTTCCT
CAAGAAGACGCCATTAGAAGAAGAGCGAGCAGCTGGGATGACATTACGCT
TAACTCATCATCGTATCCAAGGTACTTTGGAACCCAATGTTGCAGATTTC
ACTGTGAGAGAAGTGTGTCAGGAAGCTCATAATAGACCCATGAGGCACAT
CCATTTCACCAATATGGAGATTGACAATCAGAAGCATCCAGAGAAACCAT
GTCCTATTGTTGACCCTGGGTTAAAAGAGAGCATTGATGATTTGGCATTT
GGTGCAGTTGATTATGCGAAAGAAGTGCGATTCATGAAAAATGATCCCAA
ACAACGGTATTTGTATTGGAATTATTTTGAAAAGAAATTAACTAGAAAGT
AACTAATTAGTTTTCATTGTGTTTCATGTTTGCGCCTGCCATTTTATACT
AGCCAGAAATAACGTTATCAAAATGTCAAAACATGAGTTGTTTTTATGAA
ATATTTTTTAATTTTGGTATTTAATATTACTGTATACAAACTATAGGCGT
ACAAAGTTTCGCGATCAGAAACTTTCGCGATTTTCACGAATTTTGGCCTT
TTTCGCAAAAGTAAATGTCTTTGAGAATTCTTAACAGGGCAATTCGCGAA
AGTTTATGCTTGCGAAAAATTCTCAAAAAAAGTGGAAATCTATAAAACCT
TGAAATCGTAATAAATATCAAAATTTCCGCATTATCCTTTAATGCCTGTT
TAAAGTCGAAGAGCAACCATTTTTATCAGATTTAAGGAATATTTTTCATT
TTTAAGGCAATCTTCATTCGAAAATCCTCATTTTTATCCAACGATTCGCG
AAAGTTTATGCTCGCGAAAAACATTTTTTAATCAAATTTGCGAAAGTAAA
TGTCGTGAATTTCGTGATTTTTCGTCCTCGCGAAAGTTTCTGATCGCGAA
AGTTTGTACGCCAAAAGTATTTGTAACAAGTTTCTTTCACAATAGAGCTC
TACACTGAAAAAGACGAAACTGGCAACACTTGGATGGTCGCTAAACATAA
AACTTCAGAAGACACGATTAAAGAGCAAATAAAACAAGTATCAAAGCTAT
ACTGTCACTTTGTGATATTCAGACAGAATGTTGACCCTTATGACATTGTA
ACTACACTCTGTCGAAAATTGCATTTTCAAAGACATGATTTTTCTTTACC
CACAAAATTGAATTATCAAAATTCAACCATGGTACAGAAAGTCTCCGTTA
GATTCAAACCAAGCGATTCTAGAGACCGCTTACTGCAATTGAACAATGAA
GTACAAAATTTTAAAATTGGGAATTGTATTTTGAAAAAACATGGTAGATC
TGGTTCTTTAATTGGGAATCATTTTGAAGTAGTTATTCGCAATGTTTCCA
ACCCTTATGACTATTTTATAGAGGAAGTGTCTGAACATTGGGCTAAGACT
GGTTTTATAAACTATTTTGGATTTGATTACTATGGCAGTGGCAAGGTAAA
TCTAGGTATAGTATGTGTCATTTTTCATTTTTTTCGTGATTTTAATTTAA
AAATTGTTTTATTTCCACCATTTGGTAGAAAGCTAGGAAAAAGGGAGCTT
TCAGGTCGCCCTCCAGCGCCCTCAAATGCAGTCTCATACTTACTTAGTTG
ACAGTCATTGAAATAGTTTAAATAGATTGAAAAAGCAGCTGTTTTTAAAT
TCCTTTTTGTTTTACTTTCAGGAAAATTCATGCTACACTGTGCTGATACT
ACTCTGCAAATGAAGCTTCCGAATAGAGAAAGACAATTCCATTTGAAAGC
TTATCAAGCGGTCACTTGGAATAAATTTGCTTCCTATAGAATCAAAGTAA
AGTGTTGTCTTTGAAATATTTTTTATAATAGTTTACTTTGGATGAATGTA
GTATTCTTAAAAATCAACCTAAATTTAGAATTTTTTTTGGACAAATTTCT
TTCATTTTCCTACAGCTAGGGATTTTTCAAATTTTTCTTGCAGGTTCAAA
TTTTCGCGGTTTTGCCAAAAAAACACAAAAAACGCTAAAATTGATTCTCG
CAAAAATTAGTTCCAATAAGTAAGTTTTTCCACGTTTTCTCATGGCTTTT
GTTGATTCTAATCAGTTTTAAATGATTCGAATCAGTCACAGAGCTAATAA
CTTAGAACATTTCATTTTTACACTTCTTGGTCTTCTTTTCAGCAATATGG
ATTACAGCCAATCATTGGTGATTTGGTTTTAACAAAAGGAAAAGGTATAA
CCTAACAATATTTATCTTATTTTTGCCATAAGCTTTCCCTTTTTTATCCT
GGCAATATAAATAACATTAATCTAGTTTGTGGACGTTTGACTGCTTGAAT
ACAAAGGAAGTTACTTTAATTAGATAAGAAGGATACAAGTGCTTATGTAA
AACCTGGNGACGTTTGACTGCTTGAATACAAAGGAAGTTTTACTTTAATT
TTTTTTTTTACTTTTAATTATTTTAACGTAAAACTTTGAGGATTAACAAT
ATTTGAAAACTTCTCATCCACAGACAGTACTGGAATATCAATCGTCAAAT
CCATAACTGCTGAGGATATCAACCAAAAACAATACACTGTTGAACAAGTA
GTTTTACCTTATCCTGGACACGGGTTGAAGTACCCTGAAAATTTGTGCTT
GAATTACATGTCAAACATCTTGCAACAGGATGGGATAGAATTGATCAATA
TCCCACGGCGTAGAGGTGACATGAGTTTGATATGTGGGTATAGGTAAGTA
TTTCTTCTGACTTTTGAACTGATCCATTTTCACCAAAAAAAACTCAGGCC
TTTGAAAAAAAACTTTCATCTGCAAAAAAGAAATTTCACTTGCCAAGCTA
ATGAGTTTTCAATCTTTGAAAGCCAACCTAGCCTTCATTTAGTTTTCAAT
TTGCCTTGTAAATGAAGTTTTTTTATCTTTTTTGAAAGTAATTGGCTTCA
TCTTTCTGATTATATTTATTTCTTTTTCAGACCCATCATTTCAAAGCCTC
AAAATGTAGAATGGGATCTGGTTTCATACGATGATCCAACTCTTCCATTA
ATAGAAAACGATTATGAACATCTTTTCCGATTAGCTGCTCACAATTTTAA
ATATAGACAGATGAAAATTAAATATGAGGAAGCCGTACGCAAGAAGACTT
TAAATGGTGCAAGTGAGGCCATGTCGAAACCAGATAATGAAGAGTCTGGT
ACTAGTGGTCTCGAATGCAAAGAAACTGAAGAGAGTGATGAAGACTTAGC
CAAAGGTATTGATGTTGACGAGCTTTACCAAGGAATTGGTTTAGAATCTG
AAGAACAACCTTCATCATCTGATGGTTTACCAGAAAAACCACCTTCGTTC
GAGTTTAGACCTCAACTTGGAGTTGAAAATGGACTGTACAAAGCTCTTAG
ATTGAGATTTATGTTAAGCCAGGAGGCATTTGGTACTTCAGCTTTGAGAG
AGATTATGAGTACTTGCCCACCTTATGATCCTGTCAACGTTTCGCAACCG
CCCATACAAAGTTGTACTGCTCAAACATCGCTGCAGAATCCTATTGCTCC
CCTGTTGCAAGTGTCTACGGCTCAGCCATTGCCTGAAAATCCTCAACCAC
CATTGCAAAACTATACTGCTCCACCATTGCTGATAAATCCTACTTCAACA
ACACCTCTGCGGAATCCTACCGCTCCACTAATAGTAAAAAATGCTGTCAC
TCAACCGATGCAACAAAGTCTTACTGTTCTACCACTACTGCAAAATCCCA
CTGCTAAACCACTTTTAATTAATCCTGCTGCTCAACCACTGGTGCGGCCA
TTAGTGCGGATTCTTACTGCTCCGCCAGTCCTTCCCACCCCAAGACTGCT
ACATAATCCTACTGTTCAACTGGTTCAACCACTACAGAAAAGCCATAATA
TTCTACCACTACAGCAAATTCCTACCCCTCCACCAAATCTACTAAACCCT
ATCCAGATTCTTGTCGCTCAACCACCTCCGCAAAACGCTCCTGCTCCAAC
ACTGCTGCTAAATCCTACAGCTCAACCAACTCTACCGAACCCTATCGCTC
CACCACCATTGAGAAACCATATCGCTCCACCATCGCTGCTGAACCCTACC
CCTCCACCATCCCTGCAGAATACTACCCCTTTACCTCCGCTGCAGAGTTC
TACAATTCAACCACTGATGGACATTTCTACAACTCAACCACCTCTGCGGA
ATCCTACCTCTCAACCATCTCTGCGGAATTTTAACAGGCCAACATTGTCA
CAAAATCCTAACAGGCCACTATTTCTACGTAATCCTATCAGACCACCTCT
TCTTACAAATCCTAATGGGCCACCATTACTACCAAACCCTAATGGGCCAC
CATTACTACCAAACCCTAATGGGCCACCATTACTACCAAACCCTAATGGG
CCACCATTGCTACCAAATCCTAATAGGCCACCATTGCTACTAAATCCTAA
TGGGCCAGCACTACTACCAAATCCTAATGGGCCACCACTACTACCAATTC
CTAATGGACCACCACTACTACCAATTCCTAATGGACCACCACTACTACCA
AATCCTAACGGGCCACCACTGCTACCTAATCCTAATGGACCTCAACCGCA
AAATCTTCCTATTCCTGATGAAAGAATATATCTTCAGGATAGGTTTAGTG
ATGAACTAGTAGCACCTATAGGTTTTAGTCAACCATCATCAAACCCGCCT
TCATTAATGGAAATCGAAATAAAAGATCATTTTTACAAATAATACTTCTG
TTGTTATAAAGCCTCTTAATTATCTTGGTTGAAAAATCAACCTGTAAATA
TGTAAACTGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037489XLOC_037489Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059602-exon-scaffold_329-1575043694:577936..578042TCONS_00059602-exon-scaffold_329-1575043694:577936..578042Clytia hemisphaericaexon
TCONS_00059602-exon-scaffold_329-1575043694:577187..577566TCONS_00059602-exon-scaffold_329-1575043694:577187..577566Clytia hemisphaericaexon
TCONS_00059602-exon-scaffold_329-1575043694:576038..576547TCONS_00059602-exon-scaffold_329-1575043694:576038..576547Clytia hemisphaericaexon
TCONS_00059602-exon-scaffold_329-1575043694:575697..575821TCONS_00059602-exon-scaffold_329-1575043694:575697..575821Clytia hemisphaericaexon
TCONS_00059602-exon-scaffold_329-1575043694:575299..575350TCONS_00059602-exon-scaffold_329-1575043694:575299..575350Clytia hemisphaericaexon
TCONS_00059602-exon-scaffold_329-1575043694:574800..575019TCONS_00059602-exon-scaffold_329-1575043694:574800..575019Clytia hemisphaericaexon
TCONS_00059602-exon-scaffold_329-1575043694:572732..574562TCONS_00059602-exon-scaffold_329-1575043694:572732..574562Clytia hemisphaericaexon
TCONS_00059602-exon-scaffold_329-1510915933:577936..578042TCONS_00059602-exon-scaffold_329-1510915933:577936..578042Clytia hemisphaericaexon
TCONS_00059602-exon-scaffold_329-1510915933:577187..577566TCONS_00059602-exon-scaffold_329-1510915933:577187..577566Clytia hemisphaericaexon
TCONS_00059602-exon-scaffold_329-1510915933:576038..576547TCONS_00059602-exon-scaffold_329-1510915933:576038..576547Clytia hemisphaericaexon
TCONS_00059602-exon-scaffold_329-1510915933:575697..575821TCONS_00059602-exon-scaffold_329-1510915933:575697..575821Clytia hemisphaericaexon
TCONS_00059602-exon-scaffold_329-1510915933:575299..575350TCONS_00059602-exon-scaffold_329-1510915933:575299..575350Clytia hemisphaericaexon
TCONS_00059602-exon-scaffold_329-1510915933:574800..575019TCONS_00059602-exon-scaffold_329-1510915933:574800..575019Clytia hemisphaericaexon
TCONS_00059602-exon-scaffold_329-1510915933:572732..574562TCONS_00059602-exon-scaffold_329-1510915933:572732..574562Clytia hemisphaericaexon
TCONS_00059602-exon-scaffold_329-1491911889:577936..578042TCONS_00059602-exon-scaffold_329-1491911889:577936..578042Clytia hemisphaericaexon
TCONS_00059602-exon-scaffold_329-1491911889:577187..577566TCONS_00059602-exon-scaffold_329-1491911889:577187..577566Clytia hemisphaericaexon
TCONS_00059602-exon-scaffold_329-1491911889:576038..576547TCONS_00059602-exon-scaffold_329-1491911889:576038..576547Clytia hemisphaericaexon
TCONS_00059602-exon-scaffold_329-1491911889:575697..575821TCONS_00059602-exon-scaffold_329-1491911889:575697..575821Clytia hemisphaericaexon
TCONS_00059602-exon-scaffold_329-1491911889:575299..575350TCONS_00059602-exon-scaffold_329-1491911889:575299..575350Clytia hemisphaericaexon
TCONS_00059602-exon-scaffold_329-1491911889:574800..575019TCONS_00059602-exon-scaffold_329-1491911889:574800..575019Clytia hemisphaericaexon
TCONS_00059602-exon-scaffold_329-1491911889:572732..574562TCONS_00059602-exon-scaffold_329-1491911889:572732..574562Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_329supercontigscaffold_329:572732..578042 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.70077	4.62747	6.25545	8.7217	7.62085	7.40771	5.18773	4.72046	3.05989	5.20602	3.15125	1.94212	2.66058	3.12659	1.20111	1.98351	1.5045	4.52451	0.0449186	0.74435	3.24139	2.38302	3.3385	3.08536	2.93876	2.95759	8.54546e-07	2.3411	5.06368	5.49381
Blast
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BLAST of TCONS_00059602 vs. Swiss-Prot (Human)
Match: PUS7 (Pseudouridylate synthase 7 homolog OS=Homo sapiens GN=PUS7 PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 8.711e-32
Identity = 119/431 (27.61%), Postives = 194/431 (45.01%), Query Frame = 1 
Query:  472 MIPNNELYTEKDETGNTWMVAKHKTSEDTI----KEQIKQVSKLYCHFVIFRQNVDPYDIVTTLCRKLHFQRHDFS-LPTKLNYQNSTMVQKVSVRFKPSDSRDRLLQLNNEVQNFKIGNCILKKHG-RSGSLIGNHFEVVIRNVSNPYDYFIEEVSEHWAKTGFINYFGFDYYGSGKV---NLGKFMLHCADTTLQMKLPNRERQFHLKAY-------QAVTWNKFASYR---------------IKQYGLQPII----------------------------------------GDLVLTKGKDSTGISIVKSITAEDINQKQYTVEQVVLPYPGHGLKYPENLCLNYMSNILQQDGIELINIPRRRGDMSLICGYRPIISKPQNVEWDLVSYDDPTLPLIENDYEHLFR----LAAHNFKYRQMKIKY 1539
            + P  E  TE D  G  ++VA H   +  +    K    +    YCHFV++++N D  D +  L + L  + + FS + TK   + +  VQ+++V      +  RL  LN  + NFK+GN   +K+  + G L GNHF VV+RN++   D  +++      + GFINY+G   +G+  V    +G+ +L  + T + M L  + R    K Y        A T +  A+ R               + +YG++ I+                                        GDLVL KG  +T       I  +D+N   Y++  VV+P PG  + YP++        +L  D +++ N+  +  D SL   YR II +PQNV W++V+YDDP +PL   D ++L      + A   KYR +K+ +
Sbjct:  214 LFPGLETKTE-DREGKKYIVAYHAAGKKALANPRKHSWPKSRGSYCHFVLYKENKDTMDAINVLSKYLRVKPNIFSYMGTK--DKRAITVQEIAVL---KITAQRLAHLNKCLMNFKLGNFSYQKNPLKLGELQGNHFTVVLRNITGTDDQ-VQQAMNSLKEIGFINYYGMQRFGTTAVPTYQVGRAILQNSWTEV-MDLILKPRSGAEKGYLVKCREEWAKTKDPTAALRKLPVKRCVEGQLLRGLSKYGMKNIVSAFGIIPRNNRLMYIHSYQSYVWNNMVSKRIEDYGLKPVPGDLVL-KGATAT------YIEEDDVN--NYSIHDVVMPLPGFDVIYPKHKIQEAYREMLTADNLDIDNMRHKIRDYSLSGAYRKIIIRPQNVSWEVVAYDDPKIPLFNTDVDNLEGKTPPVFASEGKYRALKMDF 627
The following BLAST results are available for this feature:
BLAST of TCONS_00059602 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PUS78.711e-3227.61Pseudouridylate synthase 7 homolog OS=Homo sapiens... [more]
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