TCONS_00059454 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059454
Unique NameTCONS_00059454
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length124

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059454 ID=TCONS_00059454|Name=TCONS_00059454|organism=Clytia hemisphaerica|type=transcript|length=124bp
ATCTCATATGACGAAGCTGTTAAAAGGGAAAGTGACTATGAATATAATGG
CATAGGGTGCTTTATCTACTTCTCTCTGAAAGGACCGACTGGAGAGTTTT
GtTTGGATGCAACTTCATCTCGTC
Run BLAST on NCBI

transcript from alignment at scaffold_327:484064..484700-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059454 ID=TCONS_00059454|Name=TCONS_00059454|organism=Clytia hemisphaerica|type=transcript|length=637bp|location=Sequence derived from alignment at scaffold_327:484064..484700- (Clytia hemisphaerica)
ATCTCATATGACGAAGCTGTTAAAAGGGAAAGTGACTATGAATATAATGG
CATAGGGTGCTTTATCTACTTCTCTCTGAAAGGACCGACTGGAGAGTTTT
GGTGAGTTTTCACAAACTGATTTATAGTAAAACTGCTTTTGAAAGTTCTC
AATCTCAATTGCCGTATAAGTTTCTCAAGTTAAATCTGGTTAAATCAGTC
TTTTTAGTATTTATTTTTCAAATCGATTATGTCTGGAAACATGCAAAAAG
CGTACGATTTTTGTTGAAATTAGGCATGGTTTTCAGACTTCTACAGTCCA
AAAAAGAAATTTTAAGACCAGCCGGTTGAGTCGTAAAAAATGTTAACCCA
GCTGCGGACCGGAAACAATGACTTTTTTTAGGATGTCCCAATGTTTGCAT
GAAAAGCCTTTTTTTACAGTATTTTACTGATCTTAGATCTTGACATGGTA
TGTTTCAACAACATTTTATGCTAGCGCTCATCTTCCTAGAAAGTGCTCTA
GGTTTATCAGAAATTTTTGGGTGAAAATTAGTTTGTTATCATTTGCTTAT
TTCATTTTTATAAATAAAAAAGAACTTCTTTTTATGCCAGATGGGGTTTT
GTTTTGTTTTATAGTTTGGATGCAACTTCATCTCGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037419XLOC_037419Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059454-exon-scaffold_327-1575043694:484600..484700TCONS_00059454-exon-scaffold_327-1575043694:484600..484700Clytia hemisphaericaexon
TCONS_00059454-exon-scaffold_327-1575043694:484064..484086TCONS_00059454-exon-scaffold_327-1575043694:484064..484086Clytia hemisphaericaexon
TCONS_00059454-exon-scaffold_327-1510915933:484600..484700TCONS_00059454-exon-scaffold_327-1510915933:484600..484700Clytia hemisphaericaexon
TCONS_00059454-exon-scaffold_327-1510915933:484064..484086TCONS_00059454-exon-scaffold_327-1510915933:484064..484086Clytia hemisphaericaexon
TCONS_00059454-exon-scaffold_327-1491911889:484600..484700TCONS_00059454-exon-scaffold_327-1491911889:484600..484700Clytia hemisphaericaexon
TCONS_00059454-exon-scaffold_327-1491911889:484064..484086TCONS_00059454-exon-scaffold_327-1491911889:484064..484086Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_327supercontigscaffold_327:484064..484700 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059454 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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