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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059446 ID=TCONS_00059446|Name=TCONS_00059446|organism=Clytia hemisphaerica|type=transcript|length=1025bp
attttttagtcattttgtataatattttttgatgatataTTAGCACCAAT
ATTCTCAAGACTTCTTTAAAAGGTTTCTACGTATGAAGTAGGCTCCAACC
TCCTTCACTGGTCTACCATGTTGGTCACGACTTTCGAATTCGAAACGCGA
AATTCAGTCTATCAGCCTGCAGTCTGCGAAAAGCCCACCTCCTGGATCAA
ATCAAATATTCCTTTTTGCTGTCAAAAGAACAGAATTTGAACCATGTCTG
CCAAATGTGTATTGGAAGGAGAAGTAGTCAAAGGTACAATCACCTTCAAA
GATCTTGGTAATGGTCAAACACATGTCACAGGTGAAGTAACAGGATTGGC
CCCAGGTTTACATGGATTTCATGTTCATCAATTTGGTGATTACTCTGGCG
GATGTGGAACCACTGGTGGTCATTTCAACCCTTCTGGTAAAGAACACGGA
GGACCAGATCAGGAGAACCGACATGCTGGTGATCTTGGTAACATTACAGC
TGACTCAAACGGTGTTGCTAAAGTTGATATCAAAGACAGCCAAATTCCAT
TGAGTGGGGTAAACAGTATTGTTGGCAGAGCCGTTGTGGTGCACAAAGAT
GTTGATGATCTTGGAGCTGGTGGTTTTGAAGACAGTAAAACAACAGGTCA
TGCTGGTGCTCGATTAGCTTGTGGTGTTGTTGGCCTATCAAAATGACTAC
AACAATCTCAGCTTTGAAGAAAGTTATGTTTTTGTATTATATTATTTCAG
ATCACATTTGTGCAATCGACTCTAATGCTTTAGCAGCAGGAGCTCATACA
TATataagttttattttatatttaataATGAAGTCCTTCCAGGCAAattt
tgtattacttttttaACAATAAGATTCTTAGATTCAAAATAACTATTAGC
TGTGGGTAGAAATGTTGTTAATTTGTAGCTAGGGCTCAGTGATTGGTAAA
TATATAACTTACTTTTTAGACTAAAACTTTATTCCTAGTCATCATCAACG
GTTAAAATTGAAGGGACAATCTGAT Run BLAST on NCBI transcript from alignment at scaffold_327:381806..396538- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059446 ID=TCONS_00059446|Name=TCONS_00059446|organism=Clytia hemisphaerica|type=transcript|length=14733bp|location=Sequence derived from alignment at scaffold_327:381806..396538- (Clytia hemisphaerica)
ATTTTTTAGTCATTTTGTATAATATTTTTTGATGATATATTAGCACCAAT
ATTCTCAAGACTTCTTTAAAAGGTTTCTACGTATGAAGTAGGCTCCAACC
TCCTTCACTGGTCTACCATGTTGGTCACGACTTTCGAATTCGAAACGCGA
AATTCAGTCTATCAGCCTGCAGTCTGCGAAAAGCCCACCTCCTGGATCAA
ATCAAATATTCCTTTTTGCTGTCAAAAGGTACTAATTTTAAAACATTATT
CCCCCATCCTTTTGCTCTGATTTGAATAATTATGTAGTCCAGCCATAAAA
ACAATGATAGAGCCATGCATAATTACTGTATCATGCATATTGTTAATTAT
GCATGGTTTTATCATTGTTTTTCTGCTGGACTACATAATTATTCATCAGG
TCGGCCTCCTTTGAAAAAAGGTTTATTTATGTAGATGGGTCGTCAATGGG
CCATTCCAGAAAAGTTTTGTTACCCCTCTGTCTACCCCTATGACGTGCTT
TTTTTAATTATTTCTAGCCTCGGAAATAATTCTTTTCTAGTGGTGGTTGG
AAATTCCGATGAAAATCCATGTACTTTTTGCAAAATGCATCAGAAATGCC
TCTCTTTTTTGCCTTTTTTAATTCAATTGTCTTGAAAATTCATACATTTT
CTTCTCTCCCCTTGGAAATTTCTAATTTTGGTGAAAACTTTCCGTCCCCC
TGGTTACAGCCAAATTCTGGAATGGACCAATGTGGTCCTTGGATTTTACA
ATACAGCTCCTAGAGATAATTCAATGACACGTTCCCTTCCCCCTCAAACC
TATTGCCAGACGATCTCAATCAAACGAAATCGACGATCAAACCAGTCGAA
CCAAATTGAACGCAATCGACTGATTGTAATTCGATTGTCGAACGCAATCG
AACGTCAAAATTCTGGGTAATATTCGATTGGATTGATTGTTGTTCGACTG
GTTCGATCGTCGATTCCGTTCGATTGAGATCGTCTGGCTTTATTCTTGTA
GCTTTCCAACATCCAAGCTCTCAAACATCACAAGCCGAATGAAATTACTT
TCGATTTTCCATAGAAATTATGCGATGAACAATCCGGGGGTCAATGAATC
GACGATCGAACCAACATGGTTTCATCCATGATTTTGAGTCCCCCCTTAAA
ACACAAATCACCCCTTATCAATTTATCCCCCCTTAATTAAGGCTTAAAGA
TGGTTTTGAGGTGCCCCTTAAATTTACTCCCCCCTTAAATTTGCAAGATT
CTTATGTATACATGCCCTTAATTTTTGGGGTGTAGAGAAAATTGAGAAAT
TAGTCCTTATGCTCTTGAGGAAGCTCTTCTACTGATATTTCTTTCTTTCG
TGAAAAAGTTTGTTATCATTATATACTAACCAGCAAATTTAAAATATTAG
TAGAGAATGATAAACTGGGATAAACTGCAATAAACAATATACCTGCCGCT
GGTATAAAAATCCCTACAATACACTTTCTAAAATCGTTCTCTCCTCGAAA
TGATAGCATTTGAACGAAATTATTCCATAAAGAAGCAGAACAGACAAAAT
ATTCCAAATTGAATGTCTTTAAAAAATGTAAACTTTCGAATCACGGGACA
TTCCATCTGAAATGTGATTGGAGCCTTAGATGTAGTGTAGGATGATGACA
CACCAAGGAAACAAAAATATTTTCGAATGTAACATTCGAATCGAAATGGA
AAATTCCATAGCTGAATGTGATTGGAGCCTTAGGTGCTTTGCAGCAGTGG
CATTGTGGGAAAATCTTTCTGGAGGGGCCAAAGTCAATTTTCCAAACTTT
TACTAATTCATTTGCCTAGGTATAATGAGGAAGGAAATATTTAGTGGAGA
AGAGTAGATTTATCTTTGATGAATGGAAAAGGGAACAACAGGCCCCACCA
TGGTTGGGGTCGACTAGAAAATTTTTTTAAATCGACTGCCAAGCTACCCT
AAATCACTAAATACAAATAGACAAATTAGAGACTTGCTAGAGTGAAAAGA
AACTTAAAGAAACAATGTGTAATGCGAGCGAAGCGTGCGAAAAAATTGAT
GTTTTAAGATTTCAATATTGTTGACAGCATATTGGTCTTGGGGCGCAGTT
AGATTTTCATTTAATAATGCTATATTGTACACAAAAACTTGTAAATTAGC
TAGACTGCGAAGAAGTTACCAAATAACTGTATTGCGAGCGAAGCGAGCGA
AAAAAAATTGCAAGTATTTTAAAATTATCTTAGTAAAATTGGTCCTGGGT
GCAATTTAAGGCGCATAAAGTATGATTTTTAAGATTGGGGCGTTTAAAAA
ATCTCTTTTGGCGCCCCTTGCTCTTCGGCGCCCCTTCAAAAAAGCTCCAC
TGGGGGGCCATGGCCCCCCGGCCCCCCTGCCACAACGCCACTGTTTGCAA
GATCGGGACACAGCAGGAACAAAATTATTTTAGAATGAGTTAAAAATAAA
AAAAAATTTATTATAAATGACGATGTGAAAAAGACGAAGAAATATCAGCT
GTTGGAACAGAAAAGAAACAAGATTACTCCCCCCTCAAGTAGCAAGGGCT
TTCATTTGACCCTTGAGACCAAGTCCCCCCTTATTTCTCAGTTTTTAACA
TTTTTCCCCCTTGTGTTTTTCTCTAAATTTTAAATCACAATCAACATCAA
TCGAACGCAATCGAATATCAATCGAATCTGAAAATTGTGGTAATATTCGA
TTGAGATTCGATTGCGTTCGACAATCGAATTTCAATCGGTCGATTGCATT
CGATTTGGTTCGACTGGTTAGATCGTCAATTCCGTTCGATTGAGATTGTC
TGGCTATTGGAAAGGGTTGGATATTATCTTCATTTTATTCTGAAATTGCA
TTCTTCTGTAAAACAATATGTAACCTGGGATTGAAGTAAAGATGGTGGGT
GAAGTGAAGGATGGAATTGAATAGTATTCTGACAGTTTTGTGACTTCCCG
ACGCAAAATATGGAAAATTAAGAAAGATTATCAGTCAGTCAGACAACTTG
AACATACTTTATGTTATTTCTGGTTATTTTTGTCTTACTTACAATAGGAA
GGTTTAACTTATGCATGTGTCAGTGACAAAAACTGGATTTAAAGCTAGCT
GTGTTAAAGGGTTGCAAAGCAATCCAGACTCCACCTTCATTTCAAGTCGC
TATCAAAATAAGAGATACGCTCTTGTTCTTGAATGAAATACAGTAAATTG
GTCTAATATCAACATCCATTTAGTCACACTAGAAAGTTTTTAAGTAAAGG
TTGGCTCAGTTCAAATTTTTGGATTGTTATAGGTAAGTATGATACAGTAT
AATAAAGGTTCAGAGAGGAAAATATCTTTTTTTCAATCAGTGATTCTGAC
CTTACTTTTAATCCTATCTCTAAGAAAGGTGTTGAAAATACATGTGGGTC
ATAAGAATATATATACCGGCAGTGGGTGCACCAAAAAAAAGTATACGTAG
TTTTGTTGAGATATTGTGAGTTTCAGGATTTAAATTTTTTGTTCATTCTT
TTTATATGGTATAGAGCTACAGGATGCTCTAACTTGAATTTTGAGCTATC
ACACATTTTAAATTTGACTTTTTTTCCCTGTCAAAATTTCAAAAAATCAT
TAAAGACAGCAATCACGCTATAAATAAGACATATGACAAAGGCACAATTT
TATACTTTTTTATTCTTTTTTTGCTAACAGTTTCTCCATCTTATTTGCAT
GTCATGAACATTTCCAACACAAGCAAACTCGATACAAACCCAAGTTCGTT
GAGCAACTAGTCATGGAATGGTGATCTATTTTTTTTAAAGTTTTCTCACA
TAGCACGTACTTAATTCCCACGTCTCAGATGCAATTAAAGTATAAGGCCC
TAGGAATAAAAACACAAAAAAGGCAGACTAAGGAGGCAAGATGAGAAGTT
TTTGAAAGTGGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNGTGTTCAAGAGGAAGGAGCTTGAGCAGGGTATGGACTTTCCTT
CAAGATATAAGTTTGCCATCCATGAATTTCCATATATTATTGTGAAAAGG
AATCTCTAGGAAGAAATGTGTCTTAGAAATTGTAGTCTGTAAATTTAAAA
AAAAAGGAGTAGGAAGAGTTATAAACAAAGATATAACAAAAAAATTCGGG
NGAGCAACAGAGGAAATAGAATAGAGACATAAGTGTGCAGTAATGGAAAC
AGTATATTTCGAAACGTAAACAAGAATGCCGAAAATGTATAATTGAACTT
GGGATGACATTGGGGATGCATCAAGATATATATATAACTGAGAGCCTAAC
CCGTTTTGACGACTNATGACGGCAACAAAATAGAAAGAGAGAAAATATTC
AAAAAGCATCAGCATTAAGAAAATCAGCTAGGAAACTAAATACAATCATG
TGGAAAACTGAAGAACTAAATTTGAGTTTTAAGAGAGCTTTTAAAAGATC
TGAATTTAAGCTGTTGATTCGAGATCTGTACAATGTGATTCAAGTCTCTC
GCAGAGATGTGACATGAAGCGGAAATAAGACATCCTAATTAAGATTTGGT
TTGTAGTGAATGTACGCTGCAAACTAAACTTGGAGATTACGAACGGTTCA
AAAGATATCATCTGTTAGCCATTAACTTATAATATTTTCATAAATGACTT
GAACTTGGTCCTTTGATTATTCAAAAGTATCCATGCTCGACAAATCTATT
GAAATTCATTACTGTTCTTGTCTAGCCACTGACTCTATCAAGTTGAAACA
ACAATCATTGTTGAGCTACTCAGGAANACTACTGACATGCAACGGTTACG
GAGTAACCCTACACCCCAACGTCACCCAAATCCAAAGAATAACATTAAAA
GGAGGGTAAAGAAATTAATTTGAGGAAATTCTAGACACGTAATGACATTA
GGTAGGTTGCAAATAGTGATGTAAAAATTTTACCTTGGCCTAGTTAGCAT
TAAACTTAGAAATATCTTGGTCAGAGATTTGAGATACCTAAGATAGCAAT
CCCTAGACCGTCTANTTCCATTTAAGATACTGGATGACTAAGTCATTTTG
TGAAGCCCTTTTCTCCGTCAACTCCTATAGCGAAAATAATTTGACTTATC
AAGTATTTCCAAAAAAAAAAAAAAACCTGTTTAGCATTTGGTCACAAAAC
ATTTGGCTGCAAATTGGAGCAGTGNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNGGCATTGCTGGTACTACCCTTGCT
TAAAAAGGTCAAATGTTGTTACCTCAAATGTAGGATATTAGTTAAACGTT
AAGAATAATAAATTCAGGCCATTGAAAACTTTTTAAATAAAAACCGACCA
GTCCCCAGAACAATGGAAGAAATGATAGTTAGAGAACAGCCTCCTTTTTG
ACTTGCTGTCGTTTAAATCGATAATAAAACAAGGAGAGTTGCAGAAAATG
TTTGGGTGATTTTGGAACTGCAAAAAGTTTATGACAACATCTCAAAAATC
AAAACACATGCAAAATGACACNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTAAAACACATGCAAAATGACACATCAATCCAGTCAAAAATCCAC
TATAACAAGCATTTAATTTGATCTTATTAAAGCAAAAGACGAAAAGGCTA
TAAAGACGATAGCAAAAACTGGATCACTACCCTTATTCTTAAAGTCACAA
GTAACAACACCAATTTGTCATTTCAACTTGAGAAAGCAGATACAAATATT
CAATCGTACCAGGCTTGTATACCACGTACGTGTCAAAATCAAAACAATCA
TTAAATCTGACATCTTTCTCAAAGAANNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTTTC
ATAGCTCATTGACCGGTTAATTTATAACAATTATGAATAAAAAATACATA
ACCATAACACTGGATAACAGGCCCCTATCCCCAACTCTCAAAAGGCTACT
AAATGAAGCAGGACAACGACCGACAATCACAACTCCAGAAACGATGACAA
GTGTCACTCCAGCCACAAATCACTCAGAATGCAGGAAAATCTTTTAAGCC
TTGAACAAAATTCTAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCAGCCTTT
TAAGACTATCTAAATCCAGACGAAAAGAGAAAACAATACAAAGATTCATA
CCGAAAATTAAAGGAGGGGTGGCAGTGAGAGTTGATGGACGTTTTACTCG
TAGCGAGGCTACCATTATTGTTGTTGATCGCTCCTGTGAGGGCGTTTGGG
GCGGTAGCGGGTGAAGAGGTTGTAGTTCGTTCGTTATTTGGATGGACGAA
GCCAGCTCGCTGGATGCTTTCGAATACTGTTACCAGGATATTGGTTTCAT
CGCCTACTAAAGAAACTGGCACTGTTTATAGAATTGTAAAGTTTGGGCAA
GCCGTTGGATTCAACGCTGATTGTTGACACGTGTAGCAGATATAGCGGCA
AAATGGCTGAAATGGTGGTCGTTGTTCGTCGTGTTATTCGTTATTCAGAT
AATGAAAGATTGAAGTTGTGATCAATTGAGACTGAGCTGAACTGCGCTGA
AAGGGGCTTGACGGTAGGATATATATAGGCGAAGGAAAGAATAACCGGCA
GCCGAAATATACTATTTCATAGTCGCCTCGGTGCGGTGGCGGGATGTACT
TCATTCGACTTGGAATTAACCTGAGCTAAGGTTTAGCTCCAAACATAACA
TCAAAACCTCTCTTGCTTGGAGTTTCCAAAGCTTTTTTTTTCAACTTTTT
CAAAAATATTACCCCACATGGGAATAGCTTGTTTTACCTATGTGTCATCA
CAAGCAATTTGAAGTACAAATGAAATGGAGCGTTCTTGAGACGATTCTGA
ACGTTTCATGGCGTTCCTAGTATCCAGAACTTTCTCCAACATTCAGAATG
TTTAGGAATGTTGCATTTTGCGTTTGTTTGCTTCCAAAGGATAATGTTTA
ACTCAATAGAAATATGTTCCAGATCATTTACGACATTCATTATATTTTCC
CGAACGTTCTAAGACATCCTTAAACTAGTATATAAAGGGAATGATCAGGA
ACATTCAGGAATGCTCAAGAACATTCTATAGCATTCTTATATCGTTCCTA
AACCCTCCATATTGTTCGTTTTATTGAATGTCCCATTTTATTTGTATTTA
AAGTTGCTTGTGGTGACACATTGAAATTACATAACATTTTTCTTGAACTC
ATTTGCATTTTTTGGTATTTTAATGTGTAAGTTTGCTTGCTTTTTTTGAT
GTTTTTTTGAAATTTCGACATTAAAAAAAGTCAGATTTTTTTGGAATAAT
TTTCGAACTACTATTTGAAACCTAATGTATGATAGCTCAAAATTCAATTT
GGAGCATTCTCTATACGATCAAAAAAGAATGAACAAAAAAATTCAAATCC
TGAAGCTCGTAATATCTCGACAAACCTGTATACTTTTTTGGTGCACCCGG
TACATTGTTATAAAAAGTTCTGTTTTTTTGTGAAGAGAATAACCAGAAGC
GCCATCTTTTTATTCAAAAACTATATATTTGAGCTTTACTACAAGAGGTC
ATCGTCAGAGTGTAAAAATCTATCAATAAGAAAAAAATTAAAAACATTCT
AAAAACAAAATTTATAATTTGCTAATATCGTAGTTGAAGTAATGAAAATT
ATTGTTTCAATACTGGCAGATTCATGTTTTTACAAACAATCCTCAGTTGA
TAATAAATTTTTTTAAACAAGAGTTCCGTTGCTCTTACAAAAAAATAACA
TTGTAGGGTCTTCGTCAAAAATTGACGTCATTTTAGTCCTTGGTGACAGC
ATTTTGAAATCAGTTCATTCCTAGAATTCAAAAGTTTGTTAGGGTTCGGA
AATGTAGCGATTTCAAGTTTCTCCGCGAGACAAAGTGAGCATTTCAGTGA
CGAACGGTTGAACGGTGGGCACTGTCGGATAGTTTTCCATGCGATTTTTG
GCGATAGGTTTTTTTCGTTTTAACCTCCAAACTTCTTTTGACAATCCCGT
CTCTTTTTCGTAGCGGTGGTTTGCGAAAGAAGACTTGTGGTTTGCGAAAC
GCTTTTTGAAAGCAGGTTCGGCAAGTCCGATATAAAACTTCTCGTCATAA
TCTGGTCCTTCCTCGCATGTCACCGTGGCTTGGTATACTGATCGCTCAAC
CAAACACAATCCGTTCAGGGGATAGTTGGCTTTTACCCTGCAGTTACACA
TTCGGTTGTCTATGTTCTCGTTTGCTTCGTCTTTCGGATCGTGTTTAGTT
GAGCGATCAGTATACCAAGCCACGGTAACATGCAGAAGTTTTATATCGGA
CTTGCCGAACCTGCTTTCAAAAAAAGTTCACGACACCAAGGACTAAAATG
ACGGCACTTTTTGACGAAGACCCTAAAATGTTTTGTTTTTTTTGTAAGAG
CAACAGAAATCTTGTTTTAAAAAAAAATTATTTTCAACTGAGGATTGTTT
GTAAAAACATGAAACTGCTAGGATTAAAACAATAATTTTCATTACTTCAA
CTATGATATAACGCTTCTAACTTCGGTAAATTCTGTTTTCATATGTTTTT
TACCCCTCTTAACCTTCATTTATTGTCAAAAACACTCAAAAAATGTCCCA
CAAATTACAAGATGGGCGAAAATTAAAGGGTGCGCAAATATCCCATTTTG
AGAGTTGCTAAAAAAAATTAAGGGCACAAAAATAAAAGGCTCAAGCTAAA
AGGTACATGAAGGTGCTCTCTCAAATTGATGTTTGATTGCACTTTTTTTT
TAATTTTCATTTTTAAGAAATGCTCTGGGAGAGTTCAGACTGCAACTGTC
TATGGAAATTTTAAAATTCATTGCTGTAGAGGGTGTGGTGTCTTATCATT
GTCTTTTTGTGATGCTGGCCGCTTTTAGTTTGTTTTTGCTTGCCGGTATT
ATCTATGACAGCAAAAAAATTTTATTTTTAAGAGATTAATTTACTATCAT
GAATAAATAGACTTAGCACTTTCGTCAAGACAAAGAAGAAAGGTAAGATA
ATTGATTTTTTATTCTATATTGTTTTGGTTAGGATGATAGAAGGCTGTAA
ACACATGGTATATGAAATGAAAAACAGAGTTGGTAAAACAGAAGAGGGTT
AAACAGGTGGGTCAAAGAGAAACAGGAGCATGTGTTTAGTCAGAGAGGAG
AAACAATTATAGAAGAGGTCAAACTGATGCAGGGGTGTCTATTTTTACGA
GGAAAATACAATTTGAGCCTTTAAAGGTCTATTGAGGGCAGGGAGTCTTT
TCGTTAAAACGGAAGAGTAAAAACAGAAGGTGGAAGGAAATATCACCTAA
AATTCTGCAAAGGAAAAAAGGAAGTCAAGTCCAACTGGCAAAGAAGCGAC
GTCACAAGAGAATCAACAAAAAGTGGCGTCACAAGAAATTTCAGGAACGA
ACGAAAAGCAACCTCCTGATCCACCAACACCACCAACGCCACCCGACCCT
CCAAATAATCAGCCTCAGGCTGAGAAAGATGAGAAAATTGCAGAAGCAAC
CGAAGCTTTTCAAGGTACCAATATCAAATAACAACACAAGGATCGAAGCA
CCTCGGTGCAGTAATTGGCAGCCAAGAGTTTAAAGATTCGTTCACAGCCC
TGTGAATTCAGACAATATCGTATCGGCACATAAGTGCCGACCTAGAGGTC
ATTTTGGGTCGGCAAAGCCGTCCTAAGTAGCTTGTTTAGGTCGGCAAAGA
CAATAATTAACGAACTAACAAATTCAGCTGCTCTATTATTATGTTAATAA
CTTTTATGTTTTATAAAGAGAATGGAATGAGGCTCGACTATCATGTGTTA
TCGAATGATAACACAATTAGATTAACCTACGACCCAAAACATTTCTTTTG
TCGGCACGCCGACCTAGAGTGTAAATTACGTCGGCAAATAAAAGCCGACT
TCAGCTCAAGTTACATCAGCTTTCACGTCGGCATTGCCGAATGCCAACCT
GGATTCACAGGGCTGGTTCATCGCGGAAAAAGTTCTGACCTGGCTAAACG
AGATCACGCTTTTGTACAAAATTGCCGTCAGTCAACCTCAGTCTGCTTAC
GCCTGTTTCGTTGGAGGTTACCAGCACAAACTCCCATACTTCCTGAGGAC
AGTCCCTGACATTGAGAAGTATCTGAAACCAGTTGATGATGTGATACGAC
ACCATTTGATTCCTGCTCGAACTGATGGTCGACTTGTCAGTGACAATGAA
CGCCAGCTTCTCTCACTTCCACCACGACTTGGTGGCTTAGGATTGAAGAT
GTTTGTGGAAACAGCATCAGAAGAGTTCAATAATTCCCATCGAATAACGA
ATAACAACCAAAATCAAATTCTTGGTAAAGAGAAGATTAAAAATCCAGCA
ACCAAATATCAAATCTCAAAAGAAAGGTCAGATCGTCAAAAAGAAAAACT
CGACTTTCTCATTCAATCAATGGCACCAGAAAAAAAAGAAGAGTACCCTT
GCAAACGGTCAAAAAGTCGTATCCAACTGGCTGATGACCTTGCCATTGAA
AGAACATGGATTGGACCTCTCTAGAAACGAGTTTACCGATGCTATACGAT
TGCGCTACGGTTGGAAACTCGATAAGATGCCATCAAAATGTGCATGTGGT
GTAACCTTCGACGTCGCGCATGCTCTGTCATGTAAGGAGGCTTTGTCACT
CTGAGGCATAACGAGCTGTGTGATATCACTGCTGAGATGTTAGAAGACGT
ATGCAAAGATGTTAAAGTCAAACCAATGCTATCGGAAATCCAGGAAGGCG
AAGAAACAAGAGGAAACCAATTGAAAGAAGCAAGACTTGATGTAAGCACT
GCTAGCTTTTGGACAAGGGGTCAACGGGCATTTTTTGACATAAGGGTCTT
TGACCTACAAGCCCAGAGATACCGAAGCCAAGAGCTTGCAAAGTGCTACG
AAACAAACAAGAAAGAAGAAAAGACAATACAACAAAAGAGTACTTCAAGT
TGAAAATGGAACATTCACTCCCCTAGTCTTCTCCACGAATGGAGCAATGG
GAAAAGAATGCATGGTATTCTACAAATGTCTAGCGGGATTAATCGCAGAC
AAACGGGACTGTAATGTTAATGAGATTACACATGCAATTCGCACAAAACT
TTGTCTATATAGGAAATATTTGTTAAAAAAAAAAGGTGGTAAATCTCAGG
GGGAAAAACTTTTGGAAGTTGTTCGTCAATGAAGCTTCCAAAGAGTTTGT
TTGATTTCTTTTGTTGCCAGAAAACGCATTGGCCGGTCTTTTTACCAGAC
TTAAGCCCAATCAGCAGCGGCCTTGAAAATGAAAAACAGAGGCCGCTTAG
AAAGCCGCTTTAAAGTGAAACGAGAGTGGCCAATCCATAGCCGATAGAAA
AAAAGGTGGGACCGGTAAAAGTGAAATCTTGGCCGCTAAAAAGCCACTAT
TCTACCGCTTTTTTTGCCGATCAGTCTGGATCGGTCTTTTCATGTACTTA
AAATCGCTTGGGAAGTCACAATTAGTTGGAATAGTTTGTTAGTTCAGTCA
GACCCTGCATAATTTACACACCCTTTTTAAAGGGGAACTAAACATTTTTT
TGAAAATACCTAAATCATATCGCATACTTCCAAGGAATGACCTCTAAAAA
TATTTTTCTCTAAAAACTTCTCTATCAAAAGATATAGCTCTTTATGTTTA
CAGAAAATCTAATCTTTTTAAAGCAATGCGTATTTTGTTAGGGGAATAGG
TCGAGCCATCTGTTTGACGTAAACACGTTCAGAAAGTAATTGGAAAAGCT
CTTACTTTTAGTTGATAAAGAACCTTTAACTTTTTGTGTAGCCATAACTT
TTTATTCACAAATGGTTTAACCAAGAGACAGAATTCATTAAAAAGTCATT
TTTGAGTGGAGTAAAACTATGTTTGAACTTTCGAAAACAAGTGAGTGAAA
ATGATTTTAGAGTCGATTGAACTTTTTATTGGAATAAGCTGAAAACCCCA
AATTTAGTCCACGTAAAACAGAATCCTTCCTGAAATCAAAAATGATTTTA
CTATCTTCCTATTATTTCTTGTTCACGAAATATCAAGCTTTAAAGTTGAT
GAACATACACAAAATTCATAGAAAATATGAACGATATGACGTCACAAACA
TGTGTAAAGTGGGGGTTTATTTTAAACAAATTATACGTTTTTTAAAGAAG
GTTTTATACAAAATAGGAAAGACATTGAGAGTGGAAATTATATTTTTTCG
AAGTTATACTGTGTTGTGTAGTTCTTGGAGACAAAAAAAGCATGACCTCA
AAAAATGTTTAGTTCCCCTTTAAAAGAGGGATGCTAACTTTTCTTTCTCC
TTGCTTTCTCCTTGCTTTATTTTTCTAGAATTTTAAAAATATTTTGAGTC
CTTGGTCTGACCTGGGCCGAACCTAAAAAAATTTTTGTTTCCGGTCCACC
AGGTGACAAAATAAAAAGTCATGCGGGCGGCCAGGAAAAATTTTTTGTTG
GTCCTTTTTATGATTTCTAATAAAAAAATTAGGAAGAAAAAAATCATCTC
TCTGGCTGTTGGTATTGCCCCACATTCTGTCTTTATATTTTTTCTCTCTT
TCACTGAAAGAAATGTGTTGCTATTAATTACAAAAAGCTGGACTTTTTGT
ACTGTGCTTGTTTTTTCTTAGAATCAACTAACTTTTCATTCTAATAAATT
GATTTAATATGCATAACACTATTTATTTGATCTTTAACGTCCAGAAAGCA
TGCTAAATAACCAAACTTTTTGAAGAGTGTTACATAGGAACGATGTAACA
GTATGAATGATTCATGAGTAAAGGTTTCCTTTTTGGTTCTTATTAGAAAA
AAATGCAGCCGGTGAACCGGAAACGAAAAAATTTTTAGGGTCAGCCCTGG
TTAGGGTTTGAACTTGCAATCGTGTATTAGCCAAATACTCTACTACCTTC
ATGCTAGGGTTGTCTTTACAAAGTGTGAACCCTCCCCTTCCTTAAGGGAA
ATCCATCTCTTCTGATTGTAATTGAGGGTTTAGACTTCAATGGGGGGTCC
AATAAAGATAAGGAAGGGTTTAACAATATTTTGGTGCTTCAGAATAAATG
GCTTTACTTATTAATCATATATTATCCTACTTGTTGTTGTATGTATAGTG
AATGTTCCTACTGAATGTCTTCTCTAATTGTTTTAGAACAGAATTTGAAC
CATGTCTGCCAAATGTGTATTGGAAGGAGAAGTAGTCAAAGGTACAATCA
CCTTCAAAGATCTTGGTAATGGTCAAACACATGTCACAGGTGAAGTAACA
GGATTGGCCCCAGGTTTACATGGATTTCATGTTCATCAATTTGGTGATTA
CTCTGGCGGATGTGGAACCACTGGTGGTCATTTCAACCCTTCTGGTAAAG
AACACGGAGGACCAGATCAGGAGAACCGACATGCTGGTGATCTTGGTAAC
ATTACAGCTGACTCAAACGGTGTTGCTAAAGTTGATATCAAAGACAGCCA
AATTCCATTGAGTGGGGTAAACAGTATTGTTGGCAGAGCCGTTGTGGTGC
ACAAAGATGTTGATGATCTTGGAGCTGGTGGTTTTGAAGACAGTAAAACA
ACAGGTCATGCTGGTGCTCGATTAGCTTGTGGTGTTGTTGGCCTATCAAA
ATGACTACAACAATCTCAGCTTTGAAGAAAGTTATGTTTTTGTATTATAT
TATTTCAGATCACATTTGTGCAATCGACTCTAATGCTTTAGCAGCAGGAG
CTCATACATATATAAGTTTTATTTTATATTTAATAATGAAGTCCTTCCAG
GCAAATTTTGTATTACTTTTTTAACAATAAGATTCTTAGATTCAAAATAA
CTATTAGCTGTGGGTAGAAATGTTGTTAATTTGTAGCTAGGGCTCAGTGA
TTGGTAAATATATAACTTACTTTTTAGACTAAAACTTTATTCCTAGTCAT
CATCAACGGTTAAAATTGAAGGGACAATCTGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059446-exon-scaffold_327-1575043694:396311..396538 | TCONS_00059446-exon-scaffold_327-1575043694:396311..396538 | Clytia hemisphaerica | exon |
| TCONS_00059446-exon-scaffold_327-1575043694:381806..382602 | TCONS_00059446-exon-scaffold_327-1575043694:381806..382602 | Clytia hemisphaerica | exon |
| TCONS_00059446-exon-scaffold_327-1510915933:396311..396538 | TCONS_00059446-exon-scaffold_327-1510915933:396311..396538 | Clytia hemisphaerica | exon |
| TCONS_00059446-exon-scaffold_327-1510915933:381806..382602 | TCONS_00059446-exon-scaffold_327-1510915933:381806..382602 | Clytia hemisphaerica | exon |
| TCONS_00059446-exon-scaffold_327-1491911889:396311..396538 | TCONS_00059446-exon-scaffold_327-1491911889:396311..396538 | Clytia hemisphaerica | exon |
| TCONS_00059446-exon-scaffold_327-1491911889:381806..382602 | TCONS_00059446-exon-scaffold_327-1491911889:381806..382602 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_327 | supercontig | scaffold_327:381806..396538 - |
Blast
BLAST of TCONS_00059446 vs. Swiss-Prot (Human)
Match: SODC (Superoxide dismutase [Cu-Zn] OS=Homo sapiens GN=SOD1 PE=1 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.617e-44 Identity = 84/147 (57.14%), Postives = 105/147 (71.43%), Query Frame = 1
Query: 250 AKCVLEGE-VVKGTITFKDL-GNGQTHVTGEVTGLAPGLHGFHVHQFGDYSXXXXXXXXHFNPSGKEHGGPDQENRHAGDLGNITADSNGVAKVDIKDSQIPLSGVNSIVGRAVVVHKDVDDLGAGGFEDSKTTGHAGARLACGVVG 684
A CVL+G+ V+G I F+ NG V G + GL GLHGFHVH+FGD + GC + G HFNP ++HGGP E RH GDLGN+TAD +GVA V I+DS I LSG + I+GR +VVH+ DDLG GG E+S TG+AG+RLACGV+G
Sbjct: 5 AVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIG 151
The following BLAST results are available for this feature:
|
