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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059435 ID=TCONS_00059435|Name=TCONS_00059435|organism=Clytia hemisphaerica|type=transcript|length=780bp GTACCTGTACGGATGGCTGCTAAGAGACCATCACGGCTGTCTGGTTCTGG TTCCGGCGCTGGTTTCGGGGCACTCAGTTTGACACTTTGAAGGATGTTAG CACTGAAACCTCCCGCGGCTGCCGATGGAGGAGGCGGTGGTAGTCCACCT GCTGACGGTGGTGGCGGGGGAGGTGGGCCCCCAACAActggtggaggtgg tggtggaggtggtcCTCCTCCTACACTTGGAGGAGGAGGTGGTGGTGGTG GAACAGCCCCTCCTGTGACAGGGGGTGGTGGAGGGGGTGGGGGTACTGGT GTGGAGCTTGGTGTTCCCATGAACTCAGGTGGTGGTGGTAAAGGTGAGTT GGACACTGGCGGTGGAGGCGGCGGAGACATGGGTCTCGGTGACATTCCTT GACCACCAGCCAtcggtggtggtggtggtggaggGCTACCAGGGTGTCTG ATTGGGCTTCCTCCAGGTGGTGGAGGTGGAGCTGAAGATGGTCGACCTAT GGAAGATGCATTAGATCCCCTCTTGGTAGATTGTCGGCGTGATGGTGACA AGTGAGTGGAGTCATATGACTGTACAGAATGAGCAGGAGATGTTTCATGA GGAGGAAGAGGGTCCGCTCCTCCACCGCCTGTATCTTTCTTTTGGATCTC CCAATCAGGAATATTCTTGGCGACTTGTTTCTTTTTCACCCCTTTGACTT GCTTCTTTTCGTTCATATCACGCCGCTTGCCACGATTGTCACGTTTCTAG AAAAATAGAGTGAATAAAAGTAAGTTGAAG Run BLAST on NCBI transcript from alignment at scaffold_327:307988..310220- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059435 ID=TCONS_00059435|Name=TCONS_00059435|organism=Clytia hemisphaerica|type=transcript|length=2233bp|location=Sequence derived from alignment at scaffold_327:307988..310220- (Clytia hemisphaerica) GTACCTGTACGGATGGCTGCTAAGAGACCATCACGGCTGTCTGGTTCTGG
TTCCGGCGCTGGTTTCGGGGCACTCAGTTTGACACTTTGAAGGATGTTAG
CACTGAAACCTCCCGCGGCTGCCGATGGAGGAGGCGGTGGTAGTCCACCT
GCTGACGGTGGTGGCGGGGGAGGTGGGCCCCCAACAACTGGTGGAGGTGG
TGGTGGAGGTGGTCCTCCTCCTACACTTGGAGGAGGAGGTGGTGGTGGAA
CAGCCCCTCCTGTGACAGGGGGTGGTGGAGGGGGTGGGGGTANNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTGGTGGTGGAGGTGGTCCTCCTCCTACACTTGGAGGAGGAGGTGGTG
GTGGAACAGCCCCTCCTGTGACAGGGGGTGGTGGAGGGGGTGGGGGTACT
GGTGTGGAGCTTGGTGTTCCCATGAACTCAGGTGGTGGTGGTAAAGGTGA
GTTGGACACTGGCGGTGGAGGCGGCGGAGACATGGGTCTCGGTGACATTC
CTTGACCACCAGCCATCGGTGGTGGTGGTGGTGGAGGGCTACCAGGGTGT
CTGATTGGGCTTCCTCCAGGTGGTGGAGGTGGAGCTGAAGATGGTCGACC
TATGGAAGATGCATTAGATCCCCTCTTGGTAGATTGTCGGCGTGATGGTG
ACAAGTGAGTGGAGTCATATGACTGTACAGAATGAGCAGGAGATGTTTCA
TGAGGAGGAAGAGGGTCCGCTCCTCCACCGCCTGTATCTTTCTTTTGGAT
CTCCCAATCAGGAATATTCTTGGCGACTTGTTTCTTTTTCACCCCTTTGA
CTTGCTTCTTTTCGTTCATATCACGCCGCTTGCCACGATTGTCACGTTTC
TAGAAAAATAGAGTGAATAAAAGTAAGTTGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00059435-exon-scaffold_327-1575043694:309980..310220 | TCONS_00059435-exon-scaffold_327-1575043694:309980..310220 | Clytia hemisphaerica | exon |
TCONS_00059435-exon-scaffold_327-1575043694:307988..308526 | TCONS_00059435-exon-scaffold_327-1575043694:307988..308526 | Clytia hemisphaerica | exon |
TCONS_00059435-exon-scaffold_327-1510915933:309980..310220 | TCONS_00059435-exon-scaffold_327-1510915933:309980..310220 | Clytia hemisphaerica | exon |
TCONS_00059435-exon-scaffold_327-1510915933:307988..308526 | TCONS_00059435-exon-scaffold_327-1510915933:307988..308526 | Clytia hemisphaerica | exon |
TCONS_00059435-exon-scaffold_327-1491911889:309980..310220 | TCONS_00059435-exon-scaffold_327-1491911889:309980..310220 | Clytia hemisphaerica | exon |
TCONS_00059435-exon-scaffold_327-1491911889:307988..308526 | TCONS_00059435-exon-scaffold_327-1491911889:307988..308526 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_327 | supercontig | scaffold_327:307988..310220 - |
Blast
The following BLAST results are available for this feature:
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