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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059415 ID=TCONS_00059415|Name=TCONS_00059415|organism=Clytia hemisphaerica|type=transcript|length=2165bp
GTGACTGGGTGGGTGTTTTGAAAGGGTACTTTTCTATCTGAATTCAAGAG
AATAGTCAACATGCAGGCAACtccctctaattcgaactttcaTTATTGGA
ATCTTTTGCTAATTTAAACTGAAACATTGATCCCCCTAACTGAAAAGTAT
AAACACGTCGCTCTCTGTAATCAAATCTTTCTCTAACTTATGGAGAATTG
TTGGTTCCTTGAAGATCAAGCTAGAGAGACTCGACCAGTTTTTACCAGTT
TTGTCATTTTACCTTCTTAACCATAGTTTCATTGCAAGAAATCAATATGC
AGAAAGCATTCAAATCCACAGTGCATTCAGACCAACAGGTCATCTCTAGA
AAGACTATGCCAGAAGCCATGCAGGAAGCATACAATTCATGTGACGCAGT
CCCAAACCTTGAGCGATTGACCAAGTTTAGACATGATGGTAAAGACTCGT
TGAAGTTCTACACTGATCCTGATTACTTCTTCGAGCTGTGGAAAGAGAAG
ATCATTGCTGAATcgaatgaaaaaagaagaaggaaaaagAAACGTGACAA
TCGTGGCAAGCGGCGTGATATGAACGAAAAGAAGCAAGTCAAAGGGGTGA
AAAAGAAACAAGTCGCCAAGAATATTCCTGATTGGGAGATCCAAAAGAAA
GATACAGGCGGTGGAGGAGCGGACCCTCTTCCTCCTCATGAAACATCTCC
TGCTCATTCTGTACAGTCATATGACTCCACTCACTTGTCACCATCACGCC
GACAATCTACCAAGAGGGGATCTAATGCATCTTCCATAGGAGgaccacct
ccaccaccacctccaccagTTGTTGGGGGCCCACCTCCCCCGCCACCACC
GTCAGCAGGTGGACTACCACCGCCTCCTCCATCGGCAGCCGCGGGAGGTT
TCAGTGCTAACATCCTTCAAAGTGTCAAACTGAGTGCCCCGAAACCAGCG
CCGGAACCAGAACCAGACAGCCGTGATGGTCTCTTAGCAGCCATCCGTAC
AGGTATGAACCTTCGTAAGACACAACATGAGACGAAACAAGAGAAGAAAG
AAGCCAACATGGGAAATGACGTGGCATCCATCTTGGCACGACGTATTGCC
GTGGAGTTCAGTGATTCTGAAGATGACAGTGATTATAGTGATGATGATTG
GAGCGATGAATAAATATGGTATATCTTTAtcgaatataatttttttggta
tttgtaCTGTCACTTGTTATGTACTTGTACTTTATGTTTCGTATTTTTTT
CCATGTATTTTCTATTAATAACGCCTACTTTGAGAGGGGGGACCTTAATT
TGCGCACTcgataaaataaatttgatttttttctcgtgTTCCACCTCTTT
TGGATTGGAGACCTATTACAAAACCGGTGGTGCGATTAATTAAGcattaa
ataaacaaataaaaaggtTTTAGACCTTCTCGTAGGGATTTTTTATGATT
AATTATACTGTAGCTCATggccaatgaagtataagcccaaagggctGGAA
GcgaatctctttggtaggatttgaagccaataaATCCTATTAGATTTGCG
TGAACTTGCGATGCCTGCCTAGTTTTTTCACAAATGCCAGATTGACCGCT
TTACCGCTANAAATCCTATTAGATTTGTTTGAACTATCGATGCCTGCCTA
GTTTTTGCACAAATGCCAGATTGTCCgctttaccgctaaatttcgaaaaa
aatattactccaaaacaaagaaatcgccagactcaatccgtcgtcaaaaa
tacatCGTacgttttaaggcttcactttttcttgcctgagaatagttaaa
gattttcttctagcccttcgggcttatacttcattctcagaattctattt
tttgaattttctttcttttgtctcCCAAAAAATGAGGAATTAATTGATGT
aagcaaagatttattatacactggataaacgactcataaaacgatggaga
gcgatcattgtattttcattgtttctgaaaacaaatgatgttctagcttt
gtccgcaaaggacaactgtcatggcggctcgaagatgtctgattttttta
aatgtttatcagtcttatttttaaaaagttctctagctctttctttttgt
tcatttgcagaaaaaaaaagtttgaaagtaaggctagcattccaagctgg
atacatttgtgaaat Run BLAST on NCBI protein sequence of TCONS_00059415-protein >TCONS_00059415-protein ID=TCONS_00059415-protein|Name=TCONS_00059415-protein|organism=Clytia hemisphaerica|type=polypeptide|length=288bp
MQKAFKSTVHSDQQVISRKTMPEAMQEAYNSCDAVPNLERLTKFRHDGKD
SLKFYTDPDYFFELWKEKIIAESNEKRRRKKKRDNRGKRRDMNEKKQVKG
VKKKQVAKNIPDWEIQKKDTGGGGADPLPPHETSPAHSVQSYDSTHLSPS
RRQSTKRGSNASSIGGPPPPPPPPVVGGPPPPPPPSAGGLPPPPPSAAAG
GFSANILQSVKLSAPKPAPEPEPDSRDGLLAAIRTGMNLRKTQHETKQEK
KEANMGNDVASILARRIAVEFSDSEDDSDYSDDDWSDE Run BLAST on NCBI transcript from alignment at scaffold_327:307187..311571+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059415 ID=TCONS_00059415|Name=TCONS_00059415|organism=Clytia hemisphaerica|type=transcript|length=4385bp|location=Sequence derived from alignment at scaffold_327:307187..311571+ (Clytia hemisphaerica)
GTGACTGGGTGGGTGTTTTGAAAGGGTACTTTTCTATCTGAATTCAAGAG
AATAGTCAACATGCAGGCAACtccctctaattcgaactttcaTTATTGGA
ATCTTTTGCTAATTTAAACTGAAACATTGATCCCCCTAACTGAAAAGTAT
AAACACGTCGCTCTCTGTAATCAAATCTTTCTCTAACTTATGGAGAATTG
TTGGTTCCTTGAAGATCAAGCTAGAGAGACTCGACCAGTTTTTACCAGTT
TTGTCATTTTACCTTCTTAACCATAGTTTCATTGCAAGAAATCAATATGC
AGAAAGCATTCAAATCCACAGTGCATTCAGACCAACAGGTCATCTCTAGA
AAGACTATGCCAGAAGCCATGCAGGAAGCATACAATTCATGTGACGCAGT
CCCAAACCTTGAGCGATTGACCAAGTTTAGACATGATGGTAAAGACTCGT
TGAAGTTCTACACTGATCCTGATTACTTCTTCGAGCTGTGGAAAGAGAAG
ATCATTGCTGAATcgaatgaaaaaagaagaaggaaaaaggTACTACGCTT
TTGTCCCTGTTATACCCTTTGGATTCGGACGTCTtttaaaattaaagaat
ttttatgtTTAGTGATTGAATTGAGCCCAATGAGACAAAAGAGATTCATT
ATTTAAAACCTTCAAAATCTAATTAATGATGAGGATTGAAACATAAAGAG
TAAGAatataaatttacaaaaaaacctTAAGTTAGAAATTGATAATGCCT
CACGGCTCAAATTACTCTTACTTCATGTTCCTTTTTGCTACTTTCTCAGA
CCTTCAACTTACTTTTATTCACTCTATTTTTCTAGAAACGTGACAATCGT
GGCAAGCGGCGTGATATGAACGAAAAGAAGCAAGTCAAAGGGGTGAAAAA
GAAACAAGTCGCCAAGAATATTCCTGATTGGGAGATCCAAAAGAAAGATA
CAGGCGGTGGAGGAGCGGACCCTCTTCCTCCTCATGAAACATCTCCTGCT
CATTCTGTACAGTCATATGACTCCACTCACTTGTCACCATCACGCCGACA
ATCTACCAAGAGGGGATCTAATGCATCTTCCATAGGTCGACCATCTTCAG
CTCCACCTCCACCACCTGGAGGAAGCCCAATCAGACACCCTGGTAGCcct
ccaccaccaccaccaccgaTGGCTGGTGGTCAAGGAATGTCACCGAGACC
CATGTCTCCGCCGCCTCCACCGCCAGTGTCCAACTCACCTTTACCACCAC
CACCTGAGTTCATGGGAACACCAAGCTCCACACCAGTACCCCCACCCCCT
CCACCACCCCCTGTCACAGGAGGGGCTGTTCCACCACCACCTCCTCCTCC
AAGTGTAGGAGGAGGACCACCTCCACCACCANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCCCCA
CCCCCTCCACCACCCCCTGTCACAGGAGGGGCTGTTCCACCACCACCTCC
TCCTCCAAGTGTAGGAGGAGgaccacctccaccaccacctccaccagTTG
TTGGGGGCCCACCTCCCCCGCCACCACCGTCAGCAGGTGGACTACCACCG
CCTCCTCCATCGGCAGCCGCGGGAGGTTTCAGTGCTAACATCCTTCAAAG
TGTCAAACTGAGTGCCCCGAAACCAGCGCCGGAACCAGAACCAGACAGCC
GTGATGGTCTCTTAGCAGCCATCCGTACAGGTACGTTGATCAAAAGCTTC
TTCCTTTGCTATGTTCGAATGTTGTCGTTGGAGTAAATTTTGACACGATT
TTGATCGGTGTGATTCATAGCTTTGACAAACTTTGTCTTAATCTAAGATT
AAGGTAGAAGATGCTAATTGTTTGGGATTACATTACGTCACTTATCAAAA
TTCCTTTGATTTATCATTTCAGGTATGAACCTTCGTAAGACACAACATGA
GACGAAACAAGAGAAGAAAGAAGCCAACATGGGAAATGACGTGGCATCCA
TCTTGGCACGACGTATTGCCGTGGAGTTCAGTGATTCTGAAGATGACAGT
GATTATAGTGATGATGATTGGAGCGATGAATAAATATGGTATATCTTTAt
cgaatataatttttttggtatttgtaCTGTCACTTGTTATGTACTTGTAC
TTTATGTTTCGTATTTTTTTCCATGTATTTTCTATTAATAACGCCTACTT
TGAGAGGGGGGACCTTAATTTGCGCACTcgataaaataaatttgattttt
ttctcgtgTTCCACCTCTTTTGGATTGGAGACCTATTACAAAACCGGTGG
TGCGATTAATTAAGcattaaataaacaaataaaaaggtTTTAGACCTTCT
CGTAGGGATTTTTTATGATTAATTATACTGTAGCTCATggccaatgaagt
ataagcccaaagggctGGAAGcgaatctctttggtaggatttgaagccaa
taaATCCTATTAGATTTGCGTGAACTTGCGATGCCTGCCTAGTTTTTTCA
CAAATGCCAGATTGACCGCTTTACCGCTANAAATCCTATTAGATTTGTTT
GAACTATCGATGCCTGCCTAGTTTTTGCACAAATGCCAGATTGTCCgctt
taccgctaaatttcgaaaaaaatattactccaaaacaaagaaatcgccag
actcaatccgtcgtcaaaaatacatCGTacgttttaaggcttcacttttt
cttgcctgagaatagttaaagattttcttctagcccttcgggcttatact
tcattctcagaattctattttttgaattttctttcttttgtctcCCAAAA
AATGAGGAATTAATTGATGTaagcaaagatttattatacactggataaac
gactcataaaacgatggagagcgatcattgtattttcattgtttctgaaa
acaaatgatgttctagctttgtccgcaaaggacaactgtcatggcggctc
gaagatgtctgatttttttaaatgtttatcagtcttatttttaaaaagtt
ctctagctctttctttttgttcatttgcagaaaaaaaaagtttgaaagta
aggctagcattccaagctggatacatttgtgaaat Coding sequence (CDS) from alignment at scaffold_327:307187..311571+ >TCONS_00059415 ID=TCONS_00059415|Name=TCONS_00059415|organism=Clytia hemisphaerica|type=CDS|length=3468bp|location=Sequence derived from alignment at scaffold_327:307187..311571+ (Clytia hemisphaerica)
ATGCAGAAAGCATTCAAATCCACAGTGCATTCAGACCAACAGGTCATCTC
TAGAAAGACTATGCCAGAAGCCATGCAGGAAGCATACAATTCATGTGACG
CAGTCCCAAACCTTGAGCGATTGACCAAGTTTAGACATGATGGTAAAGAC
TCGTTGAAGTTCTACACTGATCCTGATTACTTCTTCGAGCTGTGGAAAGA
GAAGATCATTGCTGAATcgaatgaaaaaagaagaaggaaaaagAAACGTG
ACAATCGTGGCAAGCGGCGTGATATGAACGAAAAGAAGCAAGTCAAAGGG
GTGAAAAAGAAACAAGTCGCCAAGAATATTCCTGATTGGGAGATCCAAAA
GAAAGATACAGGCGGTGGAGGAGCGGACCCTCTTCCTCCTCATGAAACAT
CTCCTGCTCATTCTGTACAGTCATATGACTCCACTCACTTGTCACCATCA
CGCCGACAATCTACCAAGAGGGGATCTAATGCATCTTCCATAGGAGgacc
acctccaccaccacctccaccagTTGTTGGGGGCCCACCTCCCCCGCCAC
CACCGTCAGCAGGTGGACTACCACCGCCTCCTCCATCGGCAGCCGCGGGA
GGTTTCAGTGCTAACATCCTTCAAAGTGTCAAACTGAGTGCCCCGAAACC
AGCGCCGGAACCAGAACCAGACAGCCGTGATGGTCTCTTAGCAGCCATCC
GTACAGGTATGAACCTTCGTAAGACACAACATGAGACGAAACAAGAGAAG
AAAGAAGCCAACATGGGAAATGACGTGGCATCCATCTTGGCACGACGTAT
TGCCGTGGAGTTCAGTGATTCTGAAGATGACAGTGATTATAGTGATGATG
ATTGGAGCGATGAATAAATGCAGAAAGCATTCAAATCCACAGTGCATTCA
GACCAACAGGTCATCTCTAGAAAGACTATGCCAGAAGCCATGCAGGAAGC
ATACAATTCATGTGACGCAGTCCCAAACCTTGAGCGATTGACCAAGTTTA
GACATGATGGTAAAGACTCGTTGAAGTTCTACACTGATCCTGATTACTTC
TTCGAGCTGTGGAAAGAGAAGATCATTGCTGAATcgaatgaaaaaagaag
aaggaaaaagAAACGTGACAATCGTGGCAAGCGGCGTGATATGAACGAAA
AGAAGCAAGTCAAAGGGGTGAAAAAGAAACAAGTCGCCAAGAATATTCCT
GATTGGGAGATCCAAAAGAAAGATACAGGCGGTGGAGGAGCGGACCCTCT
TCCTCCTCATGAAACATCTCCTGCTCATTCTGTACAGTCATATGACTCCA
CTCACTTGTCACCATCACGCCGACAATCTACCAAGAGGGGATCTAATGCA
TCTTCCATAGGAGgaccacctccaccaccacctccaccagTTGTTGGGGG
CCCACCTCCCCCGCCACCACCGTCAGCAGGTGGACTACCACCGCCTCCTC
CATCGGCAGCCGCGGGAGGTTTCAGTGCTAACATCCTTCAAAGTGTCAAA
CTGAGTGCCCCGAAACCAGCGCCGGAACCAGAACCAGACAGCCGTGATGG
TCTCTTAGCAGCCATCCGTACAGGTATGAACCTTCGTAAGACACAACATG
AGACGAAACAAGAGAAGAAAGAAGCCAACATGGGAAATGACGTGGCATCC
ATCTTGGCACGACGTATTGCCGTGGAGTTCAGTGATTCTGAAGATGACAG
TGATTATAGTGATGATGATTGGAGCGATGAATAAATGCAGAAAGCATTCA
AATCCACAGTGCATTCAGACCAACAGGTCATCTCTAGAAAGACTATGCCA
GAAGCCATGCAGGAAGCATACAATTCATGTGACGCAGTCCCAAACCTTGA
GCGATTGACCAAGTTTAGACATGATGGTAAAGACTCGTTGAAGTTCTACA
CTGATCCTGATTACTTCTTCGAGCTGTGGAAAGAGAAGATCATTGCTGAA
TcgaatgaaaaaagaagaaggaaaaagAAACGTGACAATCGTGGCAAGCG
GCGTGATATGAACGAAAAGAAGCAAGTCAAAGGGGTGAAAAAGAAACAAG
TCGCCAAGAATATTCCTGATTGGGAGATCCAAAAGAAAGATACAGGCGGT
GGAGGAGCGGACCCTCTTCCTCCTCATGAAACATCTCCTGCTCATTCTGT
ACAGTCATATGACTCCACTCACTTGTCACCATCACGCCGACAATCTACCA
AGAGGGGATCTAATGCATCTTCCATAGGAGgaccacctccaccaccacct
ccaccagTTGTTGGGGGCCCACCTCCCCCGCCACCACCGTCAGCAGGTGG
ACTACCACCGCCTCCTCCATCGGCAGCCGCGGGAGGTTTCAGTGCTAACA
TCCTTCAAAGTGTCAAACTGAGTGCCCCGAAACCAGCGCCGGAACCAGAA
CCAGACAGCCGTGATGGTCTCTTAGCAGCCATCCGTACAGGTATGAACCT
TCGTAAGACACAACATGAGACGAAACAAGAGAAGAAAGAAGCCAACATGG
GAAATGACGTGGCATCCATCTTGGCACGACGTATTGCCGTGGAGTTCAGT
GATTCTGAAGATGACAGTGATTATAGTGATGATGATTGGAGCGATGAATA
AATGCAGAAAGCATTCAAATCCACAGTGCATTCAGACCAACAGGTCATCT
CTAGAAAGACTATGCCAGAAGCCATGCAGGAAGCATACAATTCATGTGAC
GCAGTCCCAAACCTTGAGCGATTGACCAAGTTTAGACATGATGGTAAAGA
CTCGTTGAAGTTCTACACTGATCCTGATTACTTCTTCGAGCTGTGGAAAG
AGAAGATCATTGCTGAATcgaatgaaaaaagaagaaggaaaaagAAACGT
GACAATCGTGGCAAGCGGCGTGATATGAACGAAAAGAAGCAAGTCAAAGG
GGTGAAAAAGAAACAAGTCGCCAAGAATATTCCTGATTGGGAGATCCAAA
AGAAAGATACAGGCGGTGGAGGAGCGGACCCTCTTCCTCCTCATGAAACA
TCTCCTGCTCATTCTGTACAGTCATATGACTCCACTCACTTGTCACCATC
ACGCCGACAATCTACCAAGAGGGGATCTAATGCATCTTCCATAGGAGgac
cacctccaccaccacctccaccagTTGTTGGGGGCCCACCTCCCCCGCCA
CCACCGTCAGCAGGTGGACTACCACCGCCTCCTCCATCGGCAGCCGCGGG
AGGTTTCAGTGCTAACATCCTTCAAAGTGTCAAACTGAGTGCCCCGAAAC
CAGCGCCGGAACCAGAACCAGACAGCCGTGATGGTCTCTTAGCAGCCATC
CGTACAGGTATGAACCTTCGTAAGACACAACATGAGACGAAACAAGAGAA
GAAAGAAGCCAACATGGGAAATGACGTGGCATCCATCTTGGCACGACGTA
TTGCCGTGGAGTTCAGTGATTCTGAAGATGACAGTGATTATAGTGATGAT
GATTGGAGCGATGAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059415-exon-scaffold_327-1491911889:307187..307725 | TCONS_00059415-exon-scaffold_327-1491911889:307187..307725 | Clytia hemisphaerica | exon |
| TCONS_00059415-exon-scaffold_327-1510915933:307187..307725 | TCONS_00059415-exon-scaffold_327-1510915933:307187..307725 | Clytia hemisphaerica | exon |
| TCONS_00059415-exon-scaffold_327-1575043694:307187..307725 | TCONS_00059415-exon-scaffold_327-1575043694:307187..307725 | Clytia hemisphaerica | exon |
| TCONS_00059415-exon-scaffold_327-1491911889:308022..308271 | TCONS_00059415-exon-scaffold_327-1491911889:308022..308271 | Clytia hemisphaerica | exon |
| TCONS_00059415-exon-scaffold_327-1510915933:308022..308271 | TCONS_00059415-exon-scaffold_327-1510915933:308022..308271 | Clytia hemisphaerica | exon |
| TCONS_00059415-exon-scaffold_327-1575043694:308022..308271 | TCONS_00059415-exon-scaffold_327-1575043694:308022..308271 | Clytia hemisphaerica | exon |
| TCONS_00059415-exon-scaffold_327-1491911889:310004..310216 | TCONS_00059415-exon-scaffold_327-1491911889:310004..310216 | Clytia hemisphaerica | exon |
| TCONS_00059415-exon-scaffold_327-1510915933:310004..310216 | TCONS_00059415-exon-scaffold_327-1510915933:310004..310216 | Clytia hemisphaerica | exon |
| TCONS_00059415-exon-scaffold_327-1575043694:310004..310216 | TCONS_00059415-exon-scaffold_327-1575043694:310004..310216 | Clytia hemisphaerica | exon |
| TCONS_00059415-exon-scaffold_327-1491911889:310409..311571 | TCONS_00059415-exon-scaffold_327-1491911889:310409..311571 | Clytia hemisphaerica | exon |
| TCONS_00059415-exon-scaffold_327-1510915933:310409..311571 | TCONS_00059415-exon-scaffold_327-1510915933:310409..311571 | Clytia hemisphaerica | exon |
| TCONS_00059415-exon-scaffold_327-1575043694:310409..311571 | TCONS_00059415-exon-scaffold_327-1575043694:310409..311571 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_327 | supercontig | scaffold_327:307187..311571 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR003124 | WH2_dom |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003779 | actin binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003779 |
actin binding |
Blast
BLAST of TCONS_00059415 vs. Swiss-Prot (Human)
Match: WASF3 (Wiskott-Aldrich syndrome protein family member 3 OS=Homo sapiens GN=WASF3 PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 4.926e-22 Identity = 44/82 (53.66%), Postives = 60/82 (73.17%), Query Frame = 3
Query: 276 VSLQEINMQKAFKSTVHSDQQVISRKTMPEAMQEAYNSCDAVPNLERLTKFRHDGKDSLKFYTDPDYFFELWKEKIIAESNE 521
VSLQ+INM+KAFKS+ DQQV+S+ ++P + + YN D P L LT +R D KD LKFYTDP YFF+LWKEK++ ++ +
Sbjct: 90 VSLQDINMKKAFKSSTVQDQQVVSKNSIPNPVADIYNQSDKPPPLNILTPYRDDKKDGLKFYTDPSYFFDLWKEKMLQDTED 171
The following BLAST results are available for this feature:
|
