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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059366 ID=TCONS_00059366|Name=TCONS_00059366|organism=Clytia hemisphaerica|type=transcript|length=1148bp
TTGGCAACTAGGTTCTGAATTTTCCGCAGACCAATAATTGCTGGGGTCGA
AAAAATTGAGGCAATAACTAAAGCTTGTGTTGCGCTACACAATTTTCTTA
TTTCAGAGGAATCAAAAAGTTATGTACCTCAACACGAAAGCGAAATTATT
TCTGTAGATGAAATTCACGGACTTGAAAAATTGCCAAGACAAGGATCGAA
CAATGCGTTGTCTAGTGCTAAATGTATTCGTGAGCAGttcaaagaatatt
tcaacTCCAGAGAAGGCAGTGTTCCATGGCAACATAATATTTTTGATGTT
TAACATActatattgtattttttaactGGATGCATGGAAGTAAAAATATG
ATATATACCTAAAATGTATAGACCAATATATAACCGAAATATGATCTGAA
AATATATCCTAAAAATACAAGCCCTAAAATAAAACTAACTCAAAAtggaa
taaaagaaataaatgatttttaaaaggataaaaattaaaaagtcttgtTA
AATTGAACTTCATACAAAACTTGTTGCATTTTTATTCTTGCAATCATATT
TTGCTCCATTGGCAACTTATCCATTAATGGTGCTAAGCTCTTACAAAAGT
CCATGTTCGGGCCCTCATCTTTCTTTTCTGTGGTAGGTTGTACTAATGGT
ACAACAGGACGCTGTAGTTCGGCATTCACGCTCTTGAGCGAAGATAAGAT
CTCATTTTCAACTGCATCGCCACGTCGCTGGCGCTTAAACGAGTCACGGT
ATGGGGCTTTTTGGCTATTTTCTTTACCTTGTCTTGAGCCTGGATGTGTA
GGTATTGCGGGTGTTGGGGGAGATTGAAATGGTGTAGAGTTAGATGATGA
TAAAGTACTGGTAGATAAGAAATTTTCCTCTCGACTTGGTGGGGTGTATT
TATCTCCAAGAAACAGCAACTGATCAAAGAAATTACATCTTGGAAGCTTA
CCACTTTTACTACCACTCTTTAGCAAATGTCGACTTCTTTTTGTGTTGCA
TCTGGTCCATGCGTCTTTAAGATACTTCCATTGTAGCTTGAGTGATTCAA
CTGTAAAAAAGAACAATCAATTTAGATATGGAACAAGGGAATAGtttctg
gatttttttcttcttaccGTTTCAATGAATTAGTTGAACCTAGTCAAG Run BLAST on NCBI transcript from alignment at scaffold_326:2249..3396 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059366 ID=TCONS_00059366|Name=TCONS_00059366|organism=Clytia hemisphaerica|type=transcript|length=1148bp|location=Sequence derived from alignment at scaffold_326:2249..3396 (Clytia hemisphaerica)
CTTGACTAGGTTCAACTAATTCATTGAAACggtaagaagaaaaaaatcca
gaaaCTATTCCCTTGTTCCATATCTAAATTGATTGTTCTTTTTTACAGTT
GAATCACTCAAGCTACAATGGAAGTATCTTAAAGACGCATGGACCAGATG
CAACACAAAAAGAAGTCGACATTTGCTAAAGAGTGGTAGTAAAAGTGGTA
AGCTTCCAAGATGTAATTTCTTTGATCAGTTGCTGTTTCTTGGAGATAAA
TACACCCCACCAAGTCGAGAGGAAAATTTCTTATCTACCAGTACTTTATC
ATCATCTAACTCTACACCATTTCAATCTCCCCCAACACCCGCAATACCTA
CACATCCAGGCTCAAGACAAGGTAAAGAAAATAGCCAAAAAGCCCCATAC
CGTGACTCGTTTAAGCGCCAGCGACGTGGCGATGCAGTTGAAAATGAGAT
CTTATCTTCGCTCAAGAGCGTGAATGCCGAACTACAGCGTCCTGTTGTAC
CATTAGTACAACCTACCACAGAAAAGAAAGATGAGGGCCCGAACATGGAC
TTTTGTAAGAGCTTAGCACCATTAATGGATAAGTTGCCAATGGAGCAAAA
TATGATTGCAAGAATAAAAATGCAACAAGTTTTGTATGAAGTTCAATTTA
acaagactttttaatttttatccttttaaaaatcatttatttcttttatt
ccaTTTTGAGTTAGTTTTATTTTAGGGCTTGTATTTTTAGGATATATTTT
CAGATCATATTTCGGTTATATATTGGTCTATACATTTTAGGTATATATCA
TATTTTTACTTCCATGCATCCagttaaaaaatacaatatagTATGTTAAA
CATCAAAAATATTATGTTGCCATGGAACACTGCCTTCTCTGGAgttgaaa
tattctttgaaCTGCTCACGAATACATTTAGCACTAGACAACGCATTGTT
CGATCCTTGTCTTGGCAATTTTTCAAGTCCGTGAATTTCATCTACAGAAA
TAATTTCGCTTTCGTGTTGAGGTACATAACTTTTTGATTCCTCTGAAATA
AGAAAATTGTGTAGCGCAACACAAGCTTTAGTTATTGCCTCAATTTTTTC
GACCCCAGCAATTATTGGTCTGCGGAAAATTCAGAACCTAGTTGCCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059366-exon-scaffold_326-1491911889:2249..3396 | TCONS_00059366-exon-scaffold_326-1491911889:2249..3396 | Clytia hemisphaerica | exon |
| TCONS_00059366-exon-scaffold_326-1510915933:2249..3396 | TCONS_00059366-exon-scaffold_326-1510915933:2249..3396 | Clytia hemisphaerica | exon |
| TCONS_00059366-exon-scaffold_326-1575043694:2249..3396 | TCONS_00059366-exon-scaffold_326-1575043694:2249..3396 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_326 | supercontig | scaffold_326:2249..3396 . |
Blast
The following BLAST results are available for this feature:
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