TCONS_00059115 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059115
Unique NameTCONS_00059115
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3055

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059115 ID=TCONS_00059115|Name=TCONS_00059115|organism=Clytia hemisphaerica|type=transcript|length=3055bp
TATATAGCAAAAATTAAATACAAGTGCCGATGATGATAAGGAAGGTAtca
atattttgttgttttttatatttgattggtTTTGGCTATTCACTtcccat
tttgaaaaatgcaacaagagaagaaatcaaaaggaaagaTCTTCTTCCAC
CTGATCATATTGCTGGTGCACATATGGAACAAGATGGACACATAAATAAG
GATTATCATCGGGAAGTATTCTTAGGTAAGCTTGTTAAAGAAGGAGTTTT
GGTATGGGAGAATATGGCTGGTTACAAGAAGTTGATCAAAGTCTTTGATG
AAGTTGATAAAAGTAATGATAGACAAATTGATAAAGAGGAGATGAAGAAT
TGGATTCATGACAGAATCATGGAGCATTATAATGCAGCAACAGAAGAAAG
CAATAAGATTTTTGGAAAGGTAGATCATGATCAAAATGGATTAGTGGCAT
GGCCAGAATACAAAGCACAAATTCTTGGTCTGAACCCTAAAGATTATGAA
AAAGACAATCTGACAGTGATTGAAGACAAGTCTGgtcaatttgaaaaaga
aattcagcATTGGTTAAAGGCTGATTTTAATGGAGATAAAGTGCTGGACA
AGAATGAGTTTTTGGCCTTTTATCATCCGGAACATAACAAGAAAACAATT
GAACTAATGGTTAAAGAAATGCTCTCATCCTTTGATAAAGATAACGACCA
TATCATAACATTAGAAGAATTCACAGCATTACCCCCTGGGGAAGTCGACC
CTGAAGAAGCTGATGAAGATAAGTTGTACCAAGAAGagaAAGCTAAAGAA
TTCAAAAGAGACATGGACTTGAATAGCGATGGAAAGGTTGGCAAAGAAGA
GCTTATGCAATATTTAGATCCTCGAAACAAAGAACACGCTGTAAAGGAGG
CAGAATTCCTTATAAGATCTTCAGATAGAAATAGAGATGGTAAAATTAGT
GAACATGAAATGCTAATGAGCTATAGTATCTTTACTGGTAGTAGTTTAAC
GAACTTCGCTCAAGTGCTACATGATGAGTTTTAAAGAAGTGCTGTCTTGC
ATTTTTGCTCTCGTGGTGAATCAAACTGTCTCGATTCAGGATATCCGCTT
CTCCAATGGATTCTGATATTACTTATCGTTGTCAACATTTGATTGGCTCC
AAATGACGTATGGGATAGAAGTGGTGCATAAATCATGAATGAGACtaatt
atctttattataataATGAATTTCTTTAAAGGTTAAAAACCTTTTGATAA
CATCACCGAGAATTCATTTAAATCTTATCTATGTTGattgttgttatttt
tagaaaatttaagaacgaaTATAATGATAACAGCTTTATTTTTGTACAAT
TTAACTTTTGCGAAAAATCTCATTATATTACTATTCTTTAAGATATATCC
ATGGTATATCTAAGCTTTGAATTTCCATAAATAAGTGGCGATGCCCTAAC
TTTGCATCTTAATTATCCGaatacactcattttgttttataagcataacg
tttataagcataacgtttataagcatactgaagctcaaatttccagaaaa
attaagcatatgctaagcataccttgaggctcagccaaagaaatttttaa
aatcataatttccaaaacttcagaaaataacagaagaaagaatcatatat
catatatcatatggtaaacattcgaaaacaataaaatgtcttcatttctc
tCAAGATTAAAGAGAGGGGACAATGcgctcaaaattgagctttacttaag
catagtgagcttcagccgaaatttaccgtatgcttataaaacaaaatgag
tgtaaCCATGGATTTATTTAACATGCACCTGAGTGTTAGTAGGGGAGGCT
AACTTTTATGAGCCGTAGCATTTTTCGTGGGACTCGACCGCATGCGATTG
ATTAGTAGATAGGATTATGAGAGTTTTttgagaaatgaaaaatgacaaaa
gtaAGTTGATGATTTTTCAATGCTTTCGAAGTTCAAAAATCTGTCAGTTA
GAgtacgattgacgtcaaattttgtctaaaacgTAGTccgaatcgcagac
ctctatagatatattctatataagaaaaacttttcgctagaggatgagca
gatgCCTATCTAAAAACAGATTCCACAGTATTTCGAACTTTAAATCATCA
TATCTTTTTGTGTGTTAGAGTATAAGATTTGTTGTAGTATACTTTTGTTC
AGAATTTCATGATAACTAtcatttttgctgaatttgacTTGTAAGaatcg
tcaattttttactcatttttgtgGGGTTAGGGGTTTTTCCTACGACGTCA
GTTTTTTGGCATAAAAACTGTTGCTAAGCCTAATCCGCGGGCCCCTCTCA
AAAAGTCTCCTATCTGCTTTCGAATCAATCACATGCGGTTGAGCCCCACG
AGAAATGCTACCGATCATAAGATTGACCCCCTACTTTGCACCTGACGTTC
TTTTACAGTATGTATGTATTTACATTATGTTTATTCTGCTCTGCTGATTA
TTTTCCGTGGTTAAGTTTCTGTAGTGCTTGCTTGAAGAGTGAGTACTGTA
TATTTCCTACACGTTTGGCTAAAAAACAGACAATTACAATATTACCGATG
TGATGCCCGATGGTTTCTATATAAAAAGTATGAAATGGAAATTTGCATAT
CTCATGTTTACGTAAGTTCTTCCATTTCGTGTATCGTGTAAGCTAACATT
CACCTGATTTTGACCGAAATTGATGGATAAACAGTTATTTCGTCCTTTAG
CTGAAATTTTACTTTGATTTATGAATAGGTGTTAGGTCTGGTGTAGACGA
TATTTTATTTAATTAGTTTTTGACTGGAATTTCAGCGTTTGCTTTTTGGT
TACGGCTtatgttatttattttattttacggGTTTATAGGGTAAATTAGT
TTTTATGTTTCAACGTTGTATAAATTGATTGTATTGAAACTAAATCGAGG
TTaacttttttatactttttgagaatattttgtgaattttttatgTAACA
TTTGTATCATTAATTGAAGATTTACTAAAGTTTGAATTATACGCATGCGT
CCAGA
Run BLAST on NCBI

transcript from alignment at scaffold_318:3533..12931+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059115 ID=TCONS_00059115|Name=TCONS_00059115|organism=Clytia hemisphaerica|type=transcript|length=9399bp|location=Sequence derived from alignment at scaffold_318:3533..12931+ (Clytia hemisphaerica)
TATATAGCAAAAATTAAATACAAGTGCCGATGATGATAAGGAAGGTAtca
atattttgttgttttttatatttgattggtTTTGGCTATTCACTtcccat
tttgaaaaatgcaacaagagaagaaatcaaaaggaaagaTCTTCTTCCAC
CTGATCATATTGCTGGTGCACATATGGAACAAGATGGACACATAAATAAG
GATTATCATCGGGAAGTATTCTTAGGTAAAtgatttttagagtttttttt
atCCCACCTAAATCATCATTTCAGTattttgaatgctaaaatcgatcaca
atattccaacaaaaagACGTTGACTCAGCAAAATCCAGCTGCagttaacc
tgagatcagattgtggttgttttctgcacaccacgctgaagctttaattt
tcaagcgcctttagaggtttaccgtgcgcgtaagaaaattacgaacatct
gttatcaggttagctgCAGTAGGCATTATTTTCAAACAAGTGGCTAGATG
CACAGATTGCTCAGCATGCCTTGTGCGTGGTGTGCCACAGGATACCTTGG
GACTACAGTGTACagtatctgacaaaacatgggacagcaattcatCGACA
GCTTAAAAAATCTGTGTgtcaatttcaagaaattttgcgCAAGTCATCAA
TGACAATGATGCAAGAAATCTACAAAAGAAACCAGtaaaagatcaaagag
aaaagATGTAATTGGGAAAAAATGATTGTTCACCAATCTTGGAGATTTCC
CAAACTCAAGATTAAGTTGGTGGGTTTCACGAGTTTTCCTGTGGCATATA
TATGAAGACTCCCTGGATTGGTGAACatgaagaaataaaataaaaaataa
aaattcacctccctggaaaatatttagattgttttattttgttcaatccC
AAATGCTTATGAAAGCGCCAAATATTTTACCATCCAATCACGGCAATata
gattgttttattttgttcaatccCAAATGCTTATGAAAGCGCCAAATATT
TTACCATCCAATCACGGCAATatagattgttttattttgtacaATCAAAA
TATTGCTGTACGATTGTTTAACAAGAAGTATCCGATCAAATGGAGGTAAA
GCACTTTTATCCAATTAGAAAGGattcttagaaaaaattaaaatctttgc
atcaaattcccgctctCGTTTGAGAattaaagttaagaaaaaatTCATCC
CTTAGAATCAATAGTGACAGTGCTGAATTATTGAAAGTGACAATATTCAA
AGCTCCTAATGTTTCACACAGATTTCGCATTAAGCAAGGTTAAAAGCCTT
GAACATATATCATTCATAGTCGCATTTTAACCATCTAGAGCCTTACAACG
TCCTAACAGACCACCAACACAAATAAAAGAAAGCGTTAATAAAAACTGTA
AATGATCTTGTGAAAACCCCAAATGATAAAGGGTTTAGGCAGTTGCAGTC
TTACTCCAATTCAGCAAAGCTTTTGACAAAGTGTGTcgtcaggggggggg
gtgttagAGATAACAAACTTAATTGCATTGAGGACTTCTTAAGAGAAAGA
TCACAAAAAGCTCTTGTCAGAGGATCTGAATCAACTGAAGGGAGTGTTTA
AGGTTCAGAAGTACCACAGGGTTCGGTTTTGGGTCCATTATTGTTTTTTG
GTTTATATCAATGATACTTCAGCAGCAACCACTTCATCAGAAATAGACTT
ATACACAGACAATGCCTTGCTCTACAAAAATGTCAAATCTATACAGGACA
AGCACAATCTTCAAAAAGACCTAGATCATCTCATTGAGTGTAGCAAGCCT
GGTTGATGCAGTTCAATGCAGAGAAAAGCAAAGTTGTACAATATATTATG
CAATACGCTCACTACAAGAGGCTGCAAGAGGTCATATTCAGAGTAAAGAA
TCTAAtaataaacaaaatcttttaaaaacaaattttcaagaaTGACCAAT
AAAGTAGtgctaaaaataaaattaaaaacaatgtAATAAAATGATATAGT
AAAGATTTATTGCAttattttaaaatgtatttttagCACTATTATactgg
tcatttttgaaaatttgtttttaaaagatttgtttGTTATTAGATTTTTT
ACTCTGAAGATGACCTCTTGTAGGAGCATCTAGTATATAGTTTTtaacaa
catcaaaaacatgaatcTTCTGATTATTCTTTTTATCATTACATTAGTCG
CCCaaggaaacatttttcaaagttgtaCGAATAACAAATAAACGAAAAAT
AACTGAAGGTACCTACTCAATCCATGGGAACAATATTATATTAAACTTAT
TAAAACTGCAAAATACATAATTCTCTtaatatactttttatttttttaat
ggaagataacttttaaaatattgatatatgGCACTGGTTCTTTACTAANA
ACTTGTTAAAACTGCAAAATACATAATTCTCTtaatatactttttatttt
tttaatggaagataacttttaaaatattgatatatgGCACTGGTTCTTTA
CTAATCAAGCACTCTTATGGCATTGATTTACCACACTTGTTTTTATGCAT
AATTCTCGAAAAGAAGTTGACATCTAAGTAGCACATAACAACCAAAGCTG
CTAAAGCACAAAACTTCCCACACTTAATCTCAACGTAACCTCCAAAAATG
CTCAAAAGAGGTAAAGCTCCAAAATTACATTATTGTTGAGTATGCTTCTA
CAGTAGGGATCTAGTTGGAGATCAGTCTTTAATATACCAATTAGAAAGTA
TGCAGGGCAAAATTTTGCTGGCAATTTGTTTGGTGTAACCGGCAGTGTAA
TAAGAGTAGCTGGCAAATTACCAGCTGTCATAGGGTGGAAATAGTGCCGg
caaaaattgtaaacaagTTTTCTTTGCTAGCGGAAAATTGCTGGATTCTT
TTCTTTGTTGCCAGCTGATTGCCAGCTAAAATCTCCCCTTAGGCCAAAAC
CTTTTCTGATAATAGAATTTACACAAATGTTGCTTGCAAACTGTCTACCG
TAATTGATAGATTGCCGGATTCAACAGGTATGTAGTCAGGATGCCGATAG
AGATTTTCTGATATCAAGCTGgaagaaattcttttttgtaCTTGTTTGTA
TTAAAATCGCTTTGAGATTCACAATTATGAGTCATGATGAATAATCAAAA
ACGTTAGCAAGAAAACGATAACAAACTGTACATAAATTGcgtattagatt
tttttcttatagttgttttgatgctggagtcAGCTGTAGTTTTTAAGGTT
ACTTAGAACTTATGACATCATGATTAAGAAAAGGGCTTTTTGTAGGTCTT
TGTTGTGAAAACTATTATATTATTGTTAAATcaacttttcatttttgaca
aaaatttattgttttcacTAGTAGCAGAGTAATTCTCCTTTAGCATATCT
CTACAATTTTCACAGGTAAGCTTGTTAAAGAAGGAGTTTTGGTATGGGAG
AATATGGCTGGTTACAAGAAGTTGATCAAAGTCTTTGATGAAGTTGATAA
AAGTAATGATAGACAAATTGATAAAGAGGAGATGAAGAATTGGATTCATG
ACAGGTATATTTGTCTTCTTATCCTTTTTCCATTTTCTGTACTTTTGGAG
TTACTTTCATAACCCTTTGAGACCCATAACCCTTGTAGTTGAGCTACAGA
CTTGATTTTTTGAGTATGATCTACATTTTATATGCATATCATTATCTCGT
TTACGGAATCTTCATAAGTCTTGTCGTTCTCGGGATAATTTTTGGGCCTA
ATAATGGTCATAAGGGTAATTTCAGGTTTGTGAAATTATTTACAAGAAAC
TTTTTTAAGGGGTTTTTCTGGGATTAATTGGTGGATTTCATTCTTCTGAC
AGGAtaaacagacagacagacagacagacgtCACTAacgaaaaagttttt
attgaaaaagaaaatatgttCAGTACATATCAACATAATGttatttcaag
gtttttaaatCATCTGGTTGGAAAGTTATCAAGCCTCTAATATCCGGGTA
ACCAGAGAAGACCCATTGGGTTTGAAAGGGATAATGGTGGGGCAACTTTC
ATAGCAAACAAACTTTAGCTTAGCTTTAAAATCAGAAAGTCTTAACATAT
AACGTTACGTTATAAATAACGTACAGCTTTCAGACCAGAAGACTGCTGTT
TTGAAGTTAAGAAAGTAGCGCCCTGCTTATGAAAGTAACTCCGATGACAG
CAGAGCATTTAAAAAGGGGAAACTTCCCCTAATTTCCTTTCAACTTTATG
ACTGTGTGTAAACAAAGTCCTGGTAAGTAGGGAAGCTTGAATCGGTTGAG
GGTTCTTAACTTCATCAAAAGAtatgaaatgaaataaataaaggtTGTTA
AGTTTTTTGTATTTCTTCTatctttttcaatcatttttacacaaacaaga
gaaaaataaataaaaaattcaaaaaatataattcatGTTCAAAGCTCTGT
TTTTCTCCAGTCTCTTTCTCTTCAATTTATAGTTCTTGGGACTTTTAAAC
CCAATGTGGTTGGGGTTCGAAGATTTTACAAATTAAGGTGTCGGTTGCTG
AGTAAGGTGGGGAATGTGCTGATAAgagatttcaggtgggggtaaccctt
TTTAGGTGGGTTGGAGTGTTGCTCGCTATGAAATTTATTATTATGATATT
CAGAATTATCggtgatccaaaaaatatctgcaatctgattggttaaaaag
agtacaatatatcttgtattttacatgtaaaaatataaattgacgaaaag
atgttgttgcattgtagcggtagtagcaatctaacgtcactttgctacaa
aagtgccctgcgctttttcccaacacaaaaattgcattttttgggtcacc
gataaaccagttatcagacatttgctcgtacaatatggaaatattttact
cgttccgtaTTTTCCGTATATTTNATTAATTCCCTAAACTACTAATtact
tttttcatgattgtgTGAATTATATTGTAGAATCATGGAGCATTATAATG
CAGCAACAGAAGAAAGCAATAAGATTTTTGGAAAGGTAGATCATGATCAA
AATGGATTAGTGGCATGGCCAGAATACAAAGCACAAATTCTTGGTCTGAA
CCCTAAAGATTATGAAAAAGACAATCTGACAGgtaaaaaagtctaatttt
tcttgattttgttttaaaaaatctttgcaACTCTTTTGTAAATAACGTAT
ATTATAAGTCCACTTGTTTTTTGTTTAGTTTAGAAAATGTCATAAATTCT
ACATTATGTTGTATTATCTTACAAAGTTATTCTCCTTTTAGAAATAGTTA
CATGCATTTACTCAGAGTAAATTTCATACTGATTATTTGTTTTTTAGTGA
TTGAAGACAAGTCTGgtcaatttgaaaaagaaattcagcATTGGTTAAAG
GCTGATTTTAATGGAGATAAAGTGCTGGACAAGAATGAGTTTTTGGCCTT
TTATCATCCGGAACATAACAAGAAAACAATTGAACTAATGGTTAAAGAAA
TGCTCTCATCCTTTGATAAAGATAACGACCATGTAAGGACACTGTTAGTC
TGGAACCATACAAATTTTTACTCCATTTCACAAAGCTTACATGAGATAAA
AATTAGTATGGTAGAattggagattttgaatttgccaccagaaaaaaacc
gtttgaaaactggccaatcagaattttgttgcataaattttttttgtttt
aacagCCAACACAAATCAAAGACATATACTTTTTCGATCTATCTAGCGAT
AAAAAAAAGAGCaattaaaatcaacaaaataaacTAAGTTtgcctttctt
ctctttttttgcTAGAATGTTCGTTCTGCTAGCAATCTTTTGAAATGGAG
CTTCGTTCCGTTCCATCGTTCCGAATTCCAACTTGAAATAACGTAAAATG
GAACAAAACCTTTTAATATTCtttaattttcatatttctagATCATAACA
TTAGAAGAATTCACAGCATTACCCCCTGGGGAAGTCGACCCTGAAGAAGC
TGATGAAGATAAGTTGTACCAAGAAGagtaagtttttttaaaatagAATT
CATGAATTATCTCCTAACGTTTTCTAACTTTAGTCTTAGGTTTCCTCTAT
CGAATAATTGGAAGTGGTTTTGCTCGAGTATACTGATAGTTCTACTTCAT
CATTTTATTGGATTACCTGCAGTAGGTAAAATAAGTTCCTCGCCAAActt
aattttggatttttgctgCTCGCTGCTAAAATTGTTCTTCCTAACTTATT
AAATCTCAATTAAAACATGTCTATCAGACTTATTTTTTGAAGGAATAAAT
TTCAAAGATGAAGTTAATCATTCTAGCATTTTAGCTCGCTTATGCTTCTT
ACTCGATGTCTTTAGAGGGTGTCCTGAGTAAAATACCCAGATCATTGCCA
TAGGTAGAAAAGATTATGCGTGTATCACGGAATCTAACAAGATGGCTgag
agtcgaaaatttcgccttttGTGCACAATTATTCATTTATGAACAACatt
tataaatgaaataaactGGGGAGCACTTGGATTGAAGAGTGTCGGGTACA
TGCAACCAAGCCTGTGAAAACtggcccttagagagaccaaattcaCGCGC
AAAATTTAACTTTGAGTATCAATAGAGACCCatagagagactttgggaga
TGTCTTTTAATTTATGTCGTAGTCTGTTTTTTATTTCGTACCCTTAAAGA
GACCTGAAGAGGGGAAATTCTGACCCCCGAAGGGAGACTTTTGCCTTTTT
TGTGCAACAGAGACTTGGGAAGgtaagaaaacagaaaatagaACAGAAGC
ATAGAAAAGCTTTATTTACAAATAGTCAAAAATAGTAAAAGATTCTGATA
AGAGCagaaaaattagcaaaattatcttgtaatatactgttctttggaat
agactaaaaataggtcgtaaaaaagatgtcacgggaccggaggcttggcc
ccctactatacaCAAAGTATTTTCCAACGGTTTCTGCGGTCTGACATAGT
CTGCCACAGTACAATTTTTCAGGACACCCTGTGTAATAATGATCTGGCGT
GAAGCTTCGCATTTGTTGGCAGGAAGCCTGTTTGATTTACTGCATTGTAT
CCTCATTAtagacattttattttttcttcaggaAAGCTAAAGAATTCAAA
AGAGACATGGACTTGAATAGCGATGGAAAGGTTGGCAAAGAAGAGCTTAT
GCAATATTTAGATCCTCGAAACAAAGAACACGCTGTAAAGGAGGCAGAAT
TCCTTATAAGATCTTCAGATAGAAATAGAGATGGTAAAATTAGTGAACAT
GAAATGCTAATGAGCTATAGTATCTTTACTGGTAGTAGTTTAACGAACTT
CGCTCAAGTGCTACATGATGAGTTTTAAAGAAGTGCTGTCTTGCATTTTT
GCTCTCGTGGTGAATCAAACTGTCTCGATTCAGGATATCCGCTTCTCCAA
TGGATTCTGATATTACTTATCGTTGTCAACATTTGATTGGCTCCAAATGA
CGTATGGGATAGAAGTGGTGCATAAATCATGAATGAGACtaattatcttt
attataataATGAATTTCTTTAAAGGTTAAAAACCTTTTGATAACATCAC
CGAGAATTCATTTAAATCTTATCTATGTTGattgttgttatttttagaaa
atttaagaacgaaTATAATGATAACAGCTTTATTTTTGTACAATTTAACT
TTTGCGAAAAATCTCATTATATTACTATTCTTTAAGATATATCCATGGTA
TATCTAAGCTTTGAATTTCCATAAATAAGTGGCGATGCCCTAACTTTGCA
TCTTAATTATCCGaatacactcattttgttttataagcataacgtttata
agcataacgtttataagcatactgaagctcaaatttccagaaaaattaag
catatgctaagcataccttgaggctcagccaaagaaatttttaaaatcat
aatttccaaaacttcagaaaataacagaagaaagaatcatatatcatata
tcatatggtaaacattcgaaaacaataaaatgtcttcatttctctCAAGA
TTAAAGAGAGGGGACAATGcgctcaaaattgagctttacttaagcatagt
gagcttcagccgaaatttaccgtatgcttataaaacaaaatgagtgtaaC
CATGGATTTATTTAACATGCACCTGAGTGTTAGTAGGGGAGGCTAACTTT
TATGAGCCGTAGCATTTTTCGTGGGACTCGACCGCATGCGATTGATTAGT
AGATAGGATTATGAGAGTTTTttgagaaatgaaaaatgacaaaagtaAGT
TGATGATTTTTCAATGCTTTCGAAGTTCAAAAATCTGTCAGTTAGAgtac
gattgacgtcaaattttgtctaaaacgTAGTccgaatcgcagacctctat
agatatattctatataagaaaaacttttcgctagaggatgagcagatgCC
TATCTAAAAACAGATTCCACAGTATTTCGAACTTTAAATCATCATATCTT
TTTGTGTGTTAGAGTATAAGATTTGTTGTAGTATACTTTTGTTCAGAATT
TCATGATAACTAtcatttttgctgaatttgacTTGTAAGaatcgtcaatt
ttttactcatttttgtgGGGTTAGGGGTTTTTCCTACGACGTCAGTTTTT
TGGCATAAAAACTGTTGCTAAGCCTAATCCGCGGGCCCCTCTCAAAAAGT
CTCCTATCTGCTTTCGAATCAATCACATGCGGTTGAGCCCCACGAGAAAT
GCTACCGATCATAAGATTGACCCCCTACTTTGCACCTGACGTTCTTTTAC
AGTATGTATGTATTTACATTATGTTTATTCTGCTCTGCTGATTATTTTCC
GTGGTTAAGTTTCTGTAGTGCTTGCTTGAAGAGTGAGTACTGTATATTTC
CTACACGTTTGGCTAAAAAACAGACAATTACAATATTACCGATGTGATGC
CCGATGGTTTCTATATAAAAAGTATGAAATGGAAATTTGCATATCTCATG
TTTACGTAAGTTCTTCCATTTCGTGTATCGTGTAAGCTAACATTCACCTG
ATTTTGACCGAAATTGATGGATAAACAGTTATTTCGTCCTTTAGCTGAAA
TTTTACTTTGATTTATGAATAGGTGTTAGGTCTGGTGTAGACGATATTTT
ATTTAATTAGTTTTTGACTGGAATTTCAGCGTTTGCTTTTTGGTTACGGC
TtatgttatttattttattttacggGTTTATAGGGTAAATTAGTTTTTAT
GTTTCAACGTTGTATAAATTGATTGTATTGAAACTAAATCGAGGTTaact
tttttatactttttgagaatattttgtgaattttttatgTAACATTTGTA
TCATTAATTGAAGATTTACTAAAGTTTGAATTATACGCATGCGTCCAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037233XLOC_037233Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059115-exon-scaffold_318-1491911889:3533..3757TCONS_00059115-exon-scaffold_318-1491911889:3533..3757Clytia hemisphaericaexon
TCONS_00059115-exon-scaffold_318-1510915933:3533..3757TCONS_00059115-exon-scaffold_318-1510915933:3533..3757Clytia hemisphaericaexon
TCONS_00059115-exon-scaffold_318-1575043694:3533..3757TCONS_00059115-exon-scaffold_318-1575043694:3533..3757Clytia hemisphaericaexon
TCONS_00059115-exon-scaffold_318-1491911889:6948..7086TCONS_00059115-exon-scaffold_318-1491911889:6948..7086Clytia hemisphaericaexon
TCONS_00059115-exon-scaffold_318-1510915933:6948..7086TCONS_00059115-exon-scaffold_318-1510915933:6948..7086Clytia hemisphaericaexon
TCONS_00059115-exon-scaffold_318-1575043694:6948..7086TCONS_00059115-exon-scaffold_318-1575043694:6948..7086Clytia hemisphaericaexon
TCONS_00059115-exon-scaffold_318-1491911889:8513..8664TCONS_00059115-exon-scaffold_318-1491911889:8513..8664Clytia hemisphaericaexon
TCONS_00059115-exon-scaffold_318-1510915933:8513..8664TCONS_00059115-exon-scaffold_318-1510915933:8513..8664Clytia hemisphaericaexon
TCONS_00059115-exon-scaffold_318-1575043694:8513..8664TCONS_00059115-exon-scaffold_318-1575043694:8513..8664Clytia hemisphaericaexon
TCONS_00059115-exon-scaffold_318-1491911889:8880..9064TCONS_00059115-exon-scaffold_318-1491911889:8880..9064Clytia hemisphaericaexon
TCONS_00059115-exon-scaffold_318-1510915933:8880..9064TCONS_00059115-exon-scaffold_318-1510915933:8880..9064Clytia hemisphaericaexon
TCONS_00059115-exon-scaffold_318-1575043694:8880..9064TCONS_00059115-exon-scaffold_318-1575043694:8880..9064Clytia hemisphaericaexon
TCONS_00059115-exon-scaffold_318-1491911889:9474..9559TCONS_00059115-exon-scaffold_318-1491911889:9474..9559Clytia hemisphaericaexon
TCONS_00059115-exon-scaffold_318-1510915933:9474..9559TCONS_00059115-exon-scaffold_318-1510915933:9474..9559Clytia hemisphaericaexon
TCONS_00059115-exon-scaffold_318-1575043694:9474..9559TCONS_00059115-exon-scaffold_318-1575043694:9474..9559Clytia hemisphaericaexon
TCONS_00059115-exon-scaffold_318-1491911889:10664..12931TCONS_00059115-exon-scaffold_318-1491911889:10664..12931Clytia hemisphaericaexon
TCONS_00059115-exon-scaffold_318-1510915933:10664..12931TCONS_00059115-exon-scaffold_318-1510915933:10664..12931Clytia hemisphaericaexon
TCONS_00059115-exon-scaffold_318-1575043694:10664..12931TCONS_00059115-exon-scaffold_318-1575043694:10664..12931Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_318supercontigscaffold_318:3533..12931 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00061062	0.00795094	0.637791	0.00248428	5.8943e-05	8.09865	6.94788	0.502868	25.5955	27.2153	14.3445	19.817	7.77199	7.43334	5.83887	7.05318	9.90159	7.59318	5.83135	10.7448	8.09552	4.24733	3.75489	2.0121	11.2876	8.72508	4.9409	4.59487	5.08785	4.56229
Blast
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BLAST of TCONS_00059115 vs. Swiss-Prot (Human)
Match: CAB45 (45 kDa calcium-binding protein OS=Homo sapiens GN=SDF4 PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 3.640e-57
Identity = 122/347 (35.16%), Postives = 197/347 (56.77%), Query Frame = 3 
Query:   45 VSIFCCFLYLIGF-----GYSLPILKNATREEIKRKD---LLPPDHIAGAHMEQDGHINKDYHREVFLGKLVKEGVLVWENMAGYKKLIKVFDEVDKSNDRQIDKEEMKNWIHDRIMEHYNAATEESNKIFGKVDHDQNGLVAWPEYKAQIL---GLNPKDYE-----KDNLTVIEDKSGQFEKEIQHWLKADFN-GDKVLDKNEFLAFYHPEHNKKTIELMVKEMLSSFDKDNDHIITLEEFTALPPGEVDPEEA-DEDKLYQEEKAKEFKRDMDLNSDGKVGKEELMQYLDPRNKEHAVKEAEFLIRSSDRNRDGKISEHEMLMSYSIFTGSSLTNFAQVLHDEF 1031
            + +  C L+L+G        + P   ++TRE +  ++   +LPPDH+ G  +E DGH+N+ +H+EVFLGK +       E     +KL+ +F +VD + DR+I  +EM+ WI ++  EH+  A EES   F  VD D +G V+W EYK + L   G + K+        + L V E+     E     W +AD    D +L + EFL+F HPEH++  +  MVKE++   D+D D  +++ EF +LP G V+ ++  D D  + +++ KEF+  +D N DG V  EEL  Y+DP N+ +A+ EA+ +I  +D N++  +   E+L     FTGS L ++A+ +H+EF
Sbjct:   16 IGLAPCCLWLLGAVLLMDASARPANHSSTRERVANREENEILPPDHLNGVKLEMDGHLNRGFHQEVFLGKDLGGFDEDAEPRRSRRKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEKEVADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPEFISLPVGTVENQQGQDIDDNWVKDRKKEFEELIDSNHDGIVTAEELESYMDPMNEYNALNEAKQMIAVADENQNHHLEPEEVLKYSEFFTGSKLVDYARSVHEEF 362
The following BLAST results are available for this feature:
BLAST of TCONS_00059115 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CAB453.640e-5735.1645 kDa calcium-binding protein OS=Homo sapiens GN=... [more]
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