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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059108 ID=TCONS_00059108|Name=TCONS_00059108|organism=Clytia hemisphaerica|type=transcript|length=278bp
CTTGGAAGATTTAGaatccaaaatcaaaatctttcagcaagaaaattttg
ttcAACTTTGGAAACCCGATTGTCGTCTTTTGGCATCTGCAATTAAGGGT
AATCGACTGAGTAAAGCAAAGAAATGTGCTAACAAAAAATTAGTTTATTC
TGAAGTGAAATACTCATGTGTTCATGGTGGGCAAAAATTTACTTCACGTG
GAACTGGTAAAAGAGCTTCCTAtACTCTGAAGTCAGACTGCCTATTCTTC
GTTAGACTAAGGTTATCCAAGAATGGCC Run BLAST on NCBI transcript from alignment at scaffold_317:54621..55846+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059108 ID=TCONS_00059108|Name=TCONS_00059108|organism=Clytia hemisphaerica|type=transcript|length=1226bp|location=Sequence derived from alignment at scaffold_317:54621..55846+ (Clytia hemisphaerica)
CTTGGAAGATTTAGaatccaaaatcaaaatctttcagcaagaaaattttg
ttcAACTTTGGAAACCCGATTGTCGTCTTTTGGCATCTGCAATTAAGGGT
AATCGACTGAGTAAAGCAAAGAAATGTGCTAACAAAAAATTAGTTTATTC
TGAAGTGAAATACTCATGTGTTCATGGTGGGCAAAAATTTACTTCACGTG
GAACTGGTAAAAGAGCTTCCTAGTAAGTTTGATTATTATCTTTTGCTACT
GTAATCAATTTTCAGCCTTCTAGGATTATTCACACTCAACCTAtaattaa
gcaaaaaaaaacccaGCAATATGGAGCTTGGATTTCGTCatccccccggg
gggggggtactagggcaaaggGAGTACAGGGaggctccgctggtcagggt
acctttttcacctccaccagtcccacgtagggtcgcaaaaacaccaaaat
agaaaaatcagtcccttgTAGGGTAGCTATTTCACAGCGATCTGCTATCG
GATTCAAAATATcgattaattttaatttttttcgaaaaatttatcaatca
acaaaaacttttttattcatcCTTATTATATTTATGATCTGGTCCTACGG
TCAAAATTTTAGGTCTGTAGCACCACTACAGTCGGAATTATGTGAATTCC
GATTTACGGGATCTGAGAGGGgatttctagggattttgagggatctgaga
aaacgaaagtgctctgTTTCAAGAAACCTGATTATAGTTTTTGGAAGTTT
TAGATTTTAGTCTATTTCGTACCTCAATTGCACTATATACACAAATTTCC
ATCTTCATGCGGCTATTAAAACTcgagttattaaaaaaaacgagtcaaag
tttccccgatttttcataTTCCAACACCAGATCACCgtgttttggaaatt
ttgagacaaaatcaggaaattttgagaaaatttgggaattttagtcccat
tcagggtcacttttttcgcaaaaaatgAGTCCCATGTAGGGTCCGCTTTT
caaacctcagcggagcacccctgacggtcggcaagggtagtacccccctc
cCGGGCGTCATGCTAAATGATATCCTTTCAATGGAATTAGTCTATTTTCG
TTTGCTTGGTTTCCATGTTAATAACAAAAAACCAGCGTGACAACTTgatt
ttggttttgattttttctagtACTCTGAAGTCAGACTGCCTATTCTTCGT
TAGACTAAGGTTATCCAAGAATGGCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059108-exon-scaffold_317-1491911889:54621..54842 | TCONS_00059108-exon-scaffold_317-1491911889:54621..54842 | Clytia hemisphaerica | exon |
| TCONS_00059108-exon-scaffold_317-1510915933:54621..54842 | TCONS_00059108-exon-scaffold_317-1510915933:54621..54842 | Clytia hemisphaerica | exon |
| TCONS_00059108-exon-scaffold_317-1575043694:54621..54842 | TCONS_00059108-exon-scaffold_317-1575043694:54621..54842 | Clytia hemisphaerica | exon |
| TCONS_00059108-exon-scaffold_317-1491911889:55791..55846 | TCONS_00059108-exon-scaffold_317-1491911889:55791..55846 | Clytia hemisphaerica | exon |
| TCONS_00059108-exon-scaffold_317-1510915933:55791..55846 | TCONS_00059108-exon-scaffold_317-1510915933:55791..55846 | Clytia hemisphaerica | exon |
| TCONS_00059108-exon-scaffold_317-1575043694:55791..55846 | TCONS_00059108-exon-scaffold_317-1575043694:55791..55846 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_317 | supercontig | scaffold_317:54621..55846 + |
Blast
The following BLAST results are available for this feature:
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